+D GENES KO
#
KEGG Orthology (KO) - Agreia sp. COWG
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:agx00010]
D AGREI_1801 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AGREI_2946 cutC; Copper homeostasis protein CutC K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_0293 Predicted N-acetyl-glucosamine kinase 2, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_1422 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_3096 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AGREI_1543 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D AGREI_2067 glpX; fructose 1,6-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AGREI_2792 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AGREI_2068 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AGREI_2927 Fructose-bisphosphate aldolase class II homolog K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AGREI_1534 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AGREI_1536 gapA; glyceraldehyde-3-phosphate dehydrogenase (NAD-dependent, glycolytic) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AGREI_1535 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AGREI_2313 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AGREI_2114 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_P0082 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_1554 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AGREI_1729 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AGREI_1654 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_3117 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AGREI_1385 adhA; putative aldehyde dehydrogenase; carbonyl stress response K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D AGREI_2612 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D AGREI_0742 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_0122 4-hydroxybutyrate--CoA ligase 1 K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_1989 Galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AGREI_2340 Aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AGREI_0266 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AGREI_1665 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D AGREI_1220 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:agx00020]
D AGREI_2039 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AGREI_2199 gltA; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D AGREI_1635 citB; aconitate hydratase (bifunctional aconitase) K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AGREI_2349 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AGREI_1909 kgd; 2-oxoglutarate dehydrogenase E1 component / Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2361 sucD; succinyl-CoA synthetase (alpha subunit) K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AGREI_2362 sucC; succinyl-CoA synthetase (beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AGREI_0775 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AGREI_0774 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AGREI_0777 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AGREI_0776 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AGREI_2075 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AGREI_0729 mqo; malate dehydrogenase, FAD/NAD(P)-binding domain K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D AGREI_1416 pyc; Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D AGREI_1220 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D AGREI_1729 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AGREI_1654 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:agx00030]
D AGREI_3096 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AGREI_0884 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AGREI_1529 zwf; Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AGREI_1531 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D AGREI_2128 gndA; NADP+-dependent 6-P-gluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AGREI_0003 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AGREI_1568 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AGREI_1527 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AGREI_1528 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AGREI_0137 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AGREI_1198 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D AGREI_3079 hxlA; 3-hexulose-6-phosphate synthase (HPS) K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D AGREI_3080 rmpB; 3-hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D AGREI_2865 putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D AGREI_2038 deoC; Deoxyribose-phosphate aldolase 2 K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D AGREI_0762 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D AGREI_0266 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AGREI_3321 phnN; Ribose 1,5-bisphosphate phosphokinase PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D AGREI_2131 prs; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AGREI_3285 eda; 4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AGREI_2962 Gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D AGREI_3284 kdgK; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D AGREI_2068 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AGREI_2927 Fructose-bisphosphate aldolase class II homolog K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AGREI_2067 glpX; fructose 1,6-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AGREI_2792 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AGREI_1543 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:agx00040]
D AGREI_0463 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D AGREI_3281 D-galactonate dehydratase family member Caci_4410 K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D AGREI_0552 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AGREI_2234 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AGREI_0654 ulaF; L-ribulose-5-phosphate 4-epimerase UlaF K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D AGREI_1568 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AGREI_0655 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D AGREI_0653 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D AGREI_0662 xylB; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D AGREI_0663 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D AGREI_0238 xyoA; putative xylitol oxidase K00594 xyoA; alditol oxidase [EC:1.1.3.41]
C 00051 Fructose and mannose metabolism [PATH:agx00051]
D AGREI_3201 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AGREI_0101 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AGREI_0845 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AGREI_0795 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AGREI_0779 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AGREI_0540 gmd; GDP-D-mannose dehydratase, NAD(P)-binding K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AGREI_0541 GDPmannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AGREI_1543 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D AGREI_2067 glpX; fructose 1,6-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AGREI_2792 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AGREI_2409 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D AGREI_2863 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D AGREI_0238 xyoA; putative xylitol oxidase K00594 xyoA; alditol oxidase [EC:1.1.3.41]
D AGREI_0663 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D AGREI_2068 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AGREI_2927 Fructose-bisphosphate aldolase class II homolog K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AGREI_1534 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AGREI_1198 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D AGREI_2862 PTS system, fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AGREI_0578 Putative phosphatase YfbT K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C 00052 Galactose metabolism [PATH:agx00052]
D AGREI_1989 Galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AGREI_2340 Aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AGREI_2174 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AGREI_2173 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AGREI_0828 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AGREI_0848 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AGREI_2234 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AGREI_0266 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AGREI_1801 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AGREI_2946 cutC; Copper homeostasis protein CutC K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_0293 Predicted N-acetyl-glucosamine kinase 2, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_1422 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_1113 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D AGREI_2506 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D AGREI_2818 bgaB; Beta-galactosidase bgaB K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D AGREI_2819 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D AGREI_0471 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D AGREI_1117 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AGREI_1980 rafA; Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AGREI_1543 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D AGREI_2000 Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D AGREI_0404 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AGREI_1984 malL; Oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:agx00053]
D AGREI_0552 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AGREI_0793 PTS system, mannitol-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AGREI_0794 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AGREI_0654 ulaF; L-ribulose-5-phosphate 4-epimerase UlaF K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:agx00500]
D AGREI_2000 Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D AGREI_0404 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AGREI_2513 lsdA; Levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D AGREI_2510 levB; endolevanase, selectively cleaves the (beta-2,6) fructosyl bonds K01212 sacC; levanase [EC:3.2.1.65]
D AGREI_2109 ams; Amylosucrase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D AGREI_2234 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AGREI_2096 Glycoside hydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AGREI_2189 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AGREI_0260 bglA; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AGREI_1398 Endoglucanase E1 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D AGREI_2744 Glucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D AGREI_2414 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AGREI_1508 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D AGREI_1138 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D AGREI_1141 glgP; Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D AGREI_1142 glgX; glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D AGREI_1503 treS; Trehalose synthase/amylase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D AGREI_1727 Alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D AGREI_1984 malL; Oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D AGREI_1786 Mak_N_cap domain-containing protein K16146 pep2; maltokinase [EC:2.7.1.175]
D AGREI_1139 glgE; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2 K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D AGREI_1507 glgM; Alpha-maltose-1-phosphate synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D AGREI_1169 glgX; Glycogen operon protein GlgX homolog K01214 ISA; isoamylase [EC:3.2.1.68]
D AGREI_0478 glgX; Glycogen operon protein GlgX homolog K01214 ISA; isoamylase [EC:3.2.1.68]
D AGREI_1168 treY; Maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D AGREI_1167 treZ; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D AGREI_0894 otsA; Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D AGREI_0895 Trehalose 6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D AGREI_1886 Maltose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D AGREI_0266 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AGREI_1801 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AGREI_2946 cutC; Copper homeostasis protein CutC K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_0293 Predicted N-acetyl-glucosamine kinase 2, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_1422 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_3096 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AGREI_3201 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AGREI_0101 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:agx00520]
D AGREI_2348 agaA; N-acetylgalactosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D AGREI_2945 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D AGREI_0289 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D AGREI_3201 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AGREI_0101 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AGREI_2396 glmS; L-glutamine-D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AGREI_2398 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AGREI_2132 glmU; UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AGREI_0941 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AGREI_0412 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AGREI_0676 abfA; alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D AGREI_2820 Alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D AGREI_0480 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D AGREI_1801 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AGREI_2946 cutC; Copper homeostasis protein CutC K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_0293 Predicted N-acetyl-glucosamine kinase 2, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_1422 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_1665 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D AGREI_0266 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AGREI_2234 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AGREI_0552 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AGREI_2174 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AGREI_2173 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AGREI_0828 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AGREI_0848 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AGREI_3096 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AGREI_0845 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AGREI_0795 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AGREI_0779 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AGREI_0540 gmd; GDP-D-mannose dehydratase, NAD(P)-binding K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AGREI_0541 GDPmannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AGREI_1508 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:agx00620]
D AGREI_0742 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_0122 4-hydroxybutyrate--CoA ligase 1 K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_1729 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AGREI_1654 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_3117 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AGREI_1385 adhA; putative aldehyde dehydrogenase; carbonyl stress response K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D AGREI_0715 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AGREI_0714 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AGREI_1554 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AGREI_0798 bccA; Biotin carboxylase / Biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AGREI_2612 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D AGREI_1871 poxB; Pyruvate dehydrogenase [ubiquinone] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D AGREI_1416 pyc; Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D AGREI_0729 mqo; malate dehydrogenase, FAD/NAD(P)-binding domain K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D AGREI_2075 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AGREI_1915 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AGREI_1220 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AGREI_1761 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:agx00630]
D AGREI_0742 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_0122 4-hydroxybutyrate--CoA ligase 1 K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_2039 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AGREI_2199 gltA; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D AGREI_1635 citB; aconitate hydratase (bifunctional aconitase) K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AGREI_0798 bccA; Biotin carboxylase / Biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AGREI_0805 yqjD; putative propionyl-CoA carboxylase beta chain K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D AGREI_1783 glcD; Glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D AGREI_1146 katA; vegetative catalase 1 K03781 katE; catalase [EC:1.11.1.6]
D AGREI_0031 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AGREI_0888 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1658 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1661 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_2342 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AGREI_2054 gcvP; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AGREI_2056 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2055 gcvH; glycine cleavage complex lipoylprotein K02437 gcvH; glycine cleavage system H protein
D AGREI_2954 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D AGREI_2933 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AGREI_3285 eda; 4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AGREI_1909 kgd; 2-oxoglutarate dehydrogenase E1 component / Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D AGREI_2346 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:agx00640]
D AGREI_0742 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_0122 4-hydroxybutyrate--CoA ligase 1 K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_0715 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AGREI_0714 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AGREI_3226 bkdA; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D AGREI_3225 pdhB; pyruvate dehydrogenase (E1 beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D AGREI_3224 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2675 Acyl-coenzyme A oxidase 1, peroxisomal K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D AGREI_0798 bccA; Biotin carboxylase / Biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AGREI_1838 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_2781 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0337 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0805 yqjD; putative propionyl-CoA carboxylase beta chain K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D AGREI_2362 sucC; succinyl-CoA synthetase (beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AGREI_2361 sucD; succinyl-CoA synthetase (alpha subunit) K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AGREI_2065 bauC; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AGREI_0141 iolA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AGREI_2199 gltA; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D AGREI_1985 prpD; 2-methylcitrate dehydratase 2 K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D AGREI_1986 mmgF; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:agx00650]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AGREI_0775 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AGREI_0774 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AGREI_0777 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AGREI_0776 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AGREI_1838 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_2781 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0337 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0759 sad; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AGREI_0897 ilvB; acetohydroxy-acid synthase (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AGREI_0898 ilvH; acetohydroxy-acid synthase (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AGREI_2816 Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:agx00660]
D AGREI_0897 ilvB; acetohydroxy-acid synthase (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AGREI_0898 ilvH; acetohydroxy-acid synthase (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AGREI_2816 Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D AGREI_2362 sucC; succinyl-CoA synthetase (beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AGREI_2361 sucD; succinyl-CoA synthetase (alpha subunit) K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AGREI_0939 leuC; 3-isopropylmalate dehydratase (large subunit) K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AGREI_0940 leuD; 3-isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AGREI_0911 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:agx00562]
D AGREI_0109 Myo-inositol-1(Or 4)-monophosphatase/deoxyribonuclease-2 K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AGREI_0209 Myo-inositol-1(Or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AGREI_0402 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AGREI_3006 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D AGREI_0145 iolG; Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AGREI_0144 Inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D AGREI_0143 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D AGREI_0142 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D AGREI_0139 5-keto-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D AGREI_2065 bauC; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AGREI_0141 iolA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AGREI_1534 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:agx00190]
D AGREI_2110 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D AGREI_0775 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AGREI_0774 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AGREI_0777 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AGREI_0776 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AGREI_1463 qcrA; Cytochrome bc1 complex Rieske iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AGREI_1462 qcrB; Cytochrome bc1 complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D AGREI_1464 qcrC; Cytochrome bc1 complex cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D AGREI_1525 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AGREI_1460 Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D AGREI_1465 ctaE; putative cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D AGREI_1459 ctaD; putative cytochrome c oxidase subunit 1-alpha K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D AGREI_1458 ctaC; putative cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D AGREI_1524 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AGREI_1272 cydA; cytochrome bb' ubiquinol oxidase (subunit I) K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AGREI_1273 cydB; cytochrome bb' ubiquinol oxidase (subunit II) K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AGREI_1851 atpA; ATP synthase (subunit alpha, component F1) K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AGREI_1849 atpD; ATP synthase (subunit beta, component F1) K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AGREI_1850 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AGREI_1852 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AGREI_1848 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AGREI_1855 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AGREI_1853 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AGREI_1854 atpE; F0 sector of membrane-bound ATP synthase, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AGREI_2643 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D AGREI_P0079 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D AGREI_2322 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AGREI_1203 Polyphosphate:GDP phosphotransferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AGREI_0218 pkk2A; putative polyphosphate kinase PKK2A K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:agx00710]
D AGREI_1535 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AGREI_1536 gapA; glyceraldehyde-3-phosphate dehydrogenase (NAD-dependent, glycolytic) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AGREI_2068 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AGREI_2927 Fructose-bisphosphate aldolase class II homolog K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AGREI_2067 glpX; fructose 1,6-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AGREI_2792 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AGREI_1527 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AGREI_1198 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D AGREI_1534 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AGREI_1568 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AGREI_1528 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AGREI_0137 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AGREI_1915 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:agx00720]
D AGREI_1915 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AGREI_1416 pyc; Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D AGREI_2075 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AGREI_0775 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AGREI_0774 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AGREI_0777 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AGREI_0776 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AGREI_2361 sucD; succinyl-CoA synthetase (alpha subunit) K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AGREI_2362 sucC; succinyl-CoA synthetase (beta subunit) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AGREI_2349 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AGREI_1635 citB; aconitate hydratase (bifunctional aconitase) K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AGREI_2341 folD; Methylenetetrahydrofolate dehydrogenase / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AGREI_0714 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AGREI_0715 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AGREI_0742 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_0122 4-hydroxybutyrate--CoA ligase 1 K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:agx00680]
D AGREI_2916 yycR; putative dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D AGREI_2342 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AGREI_2114 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_P0082 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_1915 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AGREI_2068 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AGREI_2927 Fructose-bisphosphate aldolase class II homolog K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AGREI_2067 glpX; fructose 1,6-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AGREI_2792 Fructose-1,6-bisphosphatase, GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AGREI_1543 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D AGREI_3080 rmpB; 3-hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D AGREI_3079 hxlA; 3-hexulose-6-phosphate synthase (HPS) K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D AGREI_0926 Flavin-dependent oxidoreductase, luciferase family (Includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2]
D AGREI_0715 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AGREI_0714 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AGREI_0742 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_0122 4-hydroxybutyrate--CoA ligase 1 K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_2313 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AGREI_0905 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AGREI_2283 serC; Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AGREI_1509 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D AGREI_2251 fbiC; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase / 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32]
D AGREI_0998 fbiD; Phosphoenolpyruvate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D AGREI_1001 fbiA; Phosphoenolpyruvate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D AGREI_0997 Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:agx00910]
D AGREI_0888 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1658 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1661 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1556 gltA; glutamate synthase (large subunit, NADP-dependent) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AGREI_1555 gltB; glutamate synthase (small subunit, NADP-dependent) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AGREI_2074 mtcA; Carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:agx00920]
D AGREI_1408 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D AGREI_1627 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AGREI_0107 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AGREI_0106 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AGREI_1897 metXA; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AGREI_0614 mccB; cystathionine gamma-lyase and homocysteine gamma-lyase for reverse transsulfuration pathway K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:agx00061]
D AGREI_0798 bccA; Biotin carboxylase / Biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AGREI_1734 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D AGREI_1732 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AGREI_1733 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AGREI_1735 fabF; beta-ketoacyl-acyl carrier protein synthase II (involved in pimelate synthesis) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AGREI_1510 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_2519 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_2520 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_1157 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1421 fadD; Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1515 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2206 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2715 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:agx00071]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AGREI_1632 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AGREI_2675 Acyl-coenzyme A oxidase 1, peroxisomal K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D AGREI_0844 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AGREI_1157 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1421 fadD; Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1515 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2206 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2715 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_3117 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
D AGREI_2497 HAD-IB family hydrolase K13356 FAR; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]
C 00074 Mycolic acid biosynthesis [PATH:agx00074]
D AGREI_0798 bccA; Biotin carboxylase / Biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AGREI_2395 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AGREI_1734 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D AGREI_1732 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AGREI_0805 yqjD; putative propionyl-CoA carboxylase beta chain K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:agx00561]
D AGREI_2933 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AGREI_1385 adhA; putative aldehyde dehydrogenase; carbonyl stress response K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D AGREI_1469 dhaK; dihydroxyacetone kinase, N-terminal domain K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D AGREI_1470 dhaL; dihydroxyacetone kinase, C-terminal domain K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D AGREI_1471 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase; DHA-specific IIA component / DHA-specific phosphocarrier protein HPr K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D AGREI_1467 glpK; glycerol kinase (sn-glycerol-3-phosphate generating) K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AGREI_1990 glpK; glycerol kinase (sn-glycerol-3-phosphate generating) K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AGREI_1354 D,L-glycerol 3-phosphate phosphatase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D AGREI_1423 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AGREI_2494 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AGREI_2677 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AGREI_0575 Diacylglycerol kinase family enzyme K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AGREI_0931 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AGREI_0067 Diacylglycerol kinase family enzyme K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AGREI_0269 Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AGREI_2095 conserved protein of unknown function K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D AGREI_1117 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AGREI_1980 rafA; Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:agx00564]
D AGREI_0943 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D AGREI_1992 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D AGREI_2376 glpD; Glycerol-3-phosphate dehydrogenase 2 K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D AGREI_1423 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AGREI_2494 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AGREI_2677 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AGREI_0494 Glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D AGREI_0575 Diacylglycerol kinase family enzyme K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AGREI_0931 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AGREI_0067 Diacylglycerol kinase family enzyme K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AGREI_0269 Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AGREI_3006 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D AGREI_1476 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AGREI_2368 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AGREI_1128 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AGREI_1304 pgsA; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D AGREI_2136 Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AGREI_2626 Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AGREI_0408 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism [PATH:agx00565]
D AGREI_2493 Alkyldihydroxyacetonephosphate synthase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D AGREI_3006 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:agx00600]
D AGREI_1117 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AGREI_1980 rafA; Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:agx00592]
D AGREI_2675 Acyl-coenzyme A oxidase 1, peroxisomal K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D AGREI_1632 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:agx01040]
D AGREI_2675 Acyl-coenzyme A oxidase 1, peroxisomal K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D AGREI_2221 Lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D AGREI_0331 Lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D AGREI_1193 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D AGREI_0149 cytosolic long-chain acyl-CoA thioester hydrolase family protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:agx00230]
D AGREI_0266 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AGREI_2131 prs; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AGREI_2708 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AGREI_2700 purD; phosphoribosylglycinamide synthetase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D AGREI_2358 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AGREI_2720 purL; phosphoribosylformylglycinamidine synthetase subunit II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D AGREI_2716 purS; Phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D AGREI_2717 purQ; phosphoribosylformylglycinamidine synthetase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AGREI_2704 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D AGREI_0808 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D AGREI_0809 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D AGREI_2701 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D AGREI_3381 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AGREI_2357 purH; fused phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AGREI_2145 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AGREI_0304 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AGREI_2748 hdpA; Dihydroxyacetone phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D AGREI_0796 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AGREI_2641 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D AGREI_2377 Uncharacterized oxidoreductase MSMEG_1603/MSMEI_1564 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AGREI_2378 guaB; inosine-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AGREI_1233 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AGREI_1943 rdgB; deoxyinosine/deoxyxanthosine triphosphate pyrophosphatase, promiscuous (subunit A) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AGREI_2371 guaA; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AGREI_1908 Inosine-5'-monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7]
D AGREI_1040 Guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D AGREI_1575 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AGREI_0623 nrdE; ribonucleoside-diphosphate reductase (major subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AGREI_0624 nrdF; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AGREI_1753 dgt; Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D AGREI_2101 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D AGREI_1603 rsh; GTP pyrophosphokinase (RelA/SpoT) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AGREI_1378 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AGREI_0220 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D AGREI_2729 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AGREI_0792 add; Adenosine deaminase 1 K01488 add; adenosine deaminase [EC:3.5.4.4]
D AGREI_2417 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AGREI_1121 cpdA; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D AGREI_1788 cpdA; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D AGREI_1613 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D AGREI_1041 uox; Uricase K00365 uaZ; urate oxidase [EC:1.7.3.3]
D AGREI_3016 NAD_binding_9 domain-containing protein K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113]
D AGREI_1037 pucM; 5-hydroxyisourate hydrolase; also uricase subunit K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D AGREI_1036 Uricase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D AGREI_0036 Hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D AGREI_1042 allB; Allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D AGREI_1024 N-carbamoyl-L-amino acid hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D AGREI_1023 pucG; (S)-ureidoglycine-glyoxylate aminotransferase (PLP-dependent) K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00240 Pyrimidine metabolism [PATH:agx00240]
D AGREI_1577 pyrAB; pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AGREI_1578 pyrAA; pyrimidine-specific carbamoyl-phosphate synthetase (small subunit, glutaminase subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AGREI_1581 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AGREI_1580 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AGREI_1453 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D AGREI_2752 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D AGREI_1576 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D AGREI_1126 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D AGREI_1233 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AGREI_0799 Nucleoside triphosphate pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D AGREI_1358 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D AGREI_1366 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D AGREI_0304 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AGREI_2748 hdpA; Dihydroxyacetone phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D AGREI_0327 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D AGREI_1582 pyrR; transcriptional attenuator and uracil phosphoribosyltransferase activity K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AGREI_0785 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D AGREI_1051 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AGREI_3296 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AGREI_0909 Cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AGREI_2813 dcd; dCTP deaminase, dUMP-forming K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D AGREI_0623 nrdE; ribonucleoside-diphosphate reductase (major subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AGREI_0624 nrdF; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AGREI_0751 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D AGREI_1638 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AGREI_0786 deoA; Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D AGREI_0736 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D AGREI_0690 thyB; thymidylate synthase B K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AGREI_1006 hyuA; D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AGREI_1005 N-carbamoylputrescine amidase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:agx00250]
D AGREI_0574 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AGREI_3139 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AGREI_2516 ansA; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AGREI_2886 ald; L-alanine dehydrogenase (NAD-dependent) K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D AGREI_1784 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D AGREI_2142 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AGREI_1339 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AGREI_2729 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AGREI_3381 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AGREI_1581 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AGREI_1838 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_2781 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0337 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0759 sad; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AGREI_1556 gltA; glutamate synthase (large subunit, NADP-dependent) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AGREI_1555 gltB; glutamate synthase (small subunit, NADP-dependent) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AGREI_2849 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AGREI_0191 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AGREI_0888 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1658 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1661 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1577 pyrAB; pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AGREI_1578 pyrAA; pyrimidine-specific carbamoyl-phosphate synthetase (small subunit, glutaminase subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AGREI_2717 purQ; phosphoribosylformylglycinamidine synthetase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AGREI_2396 glmS; L-glutamine-D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AGREI_2708 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:agx00260]
D AGREI_0722 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AGREI_0723 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AGREI_1865 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AGREI_1863 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D AGREI_1864 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AGREI_2772 ltaE; Low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D AGREI_2342 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AGREI_2933 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AGREI_2313 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AGREI_0905 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AGREI_2283 serC; Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AGREI_1509 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D AGREI_2782 maoII; Copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D AGREI_2054 gcvP; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AGREI_2056 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2055 gcvH; glycine cleavage complex lipoylprotein K02437 gcvH; glycine cleavage system H protein
D AGREI_2780 prr; Gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D AGREI_0642 FAD-dependent oxidoreductase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D AGREI_0613 Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D AGREI_2179 Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D AGREI_2169 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AGREI_2086 tdcB; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AGREI_1558 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AGREI_1559 trpB; tryptophan synthase (beta subunit) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:agx00270]
D AGREI_0107 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AGREI_0106 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AGREI_0647 Cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AGREI_0613 Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D AGREI_2179 Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D AGREI_2166 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AGREI_1572 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AGREI_2662 mtnK; Methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D AGREI_2667 S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D AGREI_2668 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D AGREI_2665 mtnB; Methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D AGREI_2666 mtnC; Enolase-phosphatase E1 K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D AGREI_2658 mtnD; Acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D AGREI_2985 naeIM; Modification methylase NaeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AGREI_0855 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AGREI_3107 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AGREI_0722 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AGREI_0723 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AGREI_1865 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AGREI_1863 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D AGREI_1897 metXA; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AGREI_0614 mccB; cystathionine gamma-lyase and homocysteine gamma-lyase for reverse transsulfuration pathway K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AGREI_0648 metY; O-acetyl-L-homoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D AGREI_1896 metY; O-acetyl-L-homoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D AGREI_0912 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AGREI_0574 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AGREI_1627 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AGREI_2169 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AGREI_0905 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AGREI_2283 serC; Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:agx00280]
D AGREI_0912 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AGREI_3226 bkdA; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D AGREI_3225 pdhB; pyruvate dehydrogenase (E1 beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D AGREI_3224 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_1632 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AGREI_0798 bccA; Biotin carboxylase / Biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AGREI_0805 yqjD; putative propionyl-CoA carboxylase beta chain K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D AGREI_2065 bauC; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AGREI_0141 iolA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AGREI_1838 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_2781 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0337 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:agx00290]
D AGREI_2086 tdcB; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AGREI_0939 leuC; 3-isopropylmalate dehydratase (large subunit) K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AGREI_0940 leuD; 3-isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AGREI_0911 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D AGREI_0897 ilvB; acetohydroxy-acid synthase (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AGREI_0898 ilvH; acetohydroxy-acid synthase (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AGREI_0899 ilvC; acetohydroxy-acid isomeroreductase (NADP-dependent) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AGREI_0896 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AGREI_P0078 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AGREI_0912 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AGREI_1761 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:agx00300]
D AGREI_1865 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AGREI_0722 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AGREI_0723 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AGREI_1300 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AGREI_1765 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D AGREI_2037 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D AGREI_1337 argD; N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AGREI_1976 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D AGREI_2036 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AGREI_1313 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AGREI_1866 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AGREI_3423 Aromatic-amino-acid aminotransferase 1 K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D AGREI_1434 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AGREI_1435 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:agx00310]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_0844 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AGREI_3023 Hydrolase in pqqF 5'region K01506 davA; 5-aminopentanamidase [EC:3.5.1.30]
D AGREI_1838 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_2781 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0337 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0759 sad; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:agx00220]
D AGREI_1338 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AGREI_3179 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AGREI_2142 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AGREI_1339 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AGREI_1880 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D AGREI_0222 N(G),N(G)-dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D AGREI_2717 purQ; phosphoribosylformylglycinamidine synthetase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AGREI_0888 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1658 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1661 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1577 pyrAB; pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AGREI_1578 pyrAA; pyrimidine-specific carbamoyl-phosphate synthetase (small subunit, glutaminase subunit) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AGREI_0574 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AGREI_2616 argA; Amino-acid acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D AGREI_1335 argJ; Glutamate N-acetyltransferase / Amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D AGREI_1336 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D AGREI_1334 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D AGREI_1337 argD; N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:agx00330]
D AGREI_1046 Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D AGREI_1058 putative mycofactocin system creatinine amidohydrolase family protein MftE K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D AGREI_1051 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AGREI_3296 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AGREI_0909 Cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AGREI_2350 Acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D AGREI_1022 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_1889 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_2854 Acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_0222 N(G),N(G)-dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D AGREI_1880 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D AGREI_0223 rocD; ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D AGREI_0330 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D AGREI_2849 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AGREI_0191 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AGREI_1240 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AGREI_1241 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D AGREI_2670 pip; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AGREI_0574 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:agx00340]
D AGREI_1566 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D AGREI_1321 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D AGREI_1320 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D AGREI_1565 hisF; imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D AGREI_1319 hisB; imidazoleglycerol-phosphate dehydratase [Mn(II)-dependent] K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D AGREI_1318 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AGREI_3227 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AGREI_1914 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D AGREI_1451 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D AGREI_2177 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
C 00350 Tyrosine metabolism [PATH:agx00350]
D AGREI_0574 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AGREI_1318 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AGREI_3227 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AGREI_2782 maoII; Copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D AGREI_3117 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AGREI_0759 sad; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:agx00360]
D AGREI_2782 maoII; Copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D AGREI_0574 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AGREI_1318 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AGREI_3227 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AGREI_1022 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_1889 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_2854 Acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_1521 Ferredoxin, 2Fe-2S K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:agx00380]
D AGREI_2016 kynU; Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_0844 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AGREI_1022 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_1889 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_2854 Acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_1146 katA; vegetative catalase 1 K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:agx00400]
D AGREI_1424 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AGREI_1587 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AGREI_1585 yqhS; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D AGREI_1588 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AGREI_1912 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D AGREI_1589 aroF; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AGREI_1563 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AGREI_1466 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D AGREI_3337 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D AGREI_1321 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D AGREI_1560 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D AGREI_1558 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AGREI_1559 trpB; tryptophan synthase (beta subunit) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AGREI_2725 Chorismate mutase I K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D AGREI_1419 Periplasmic chorismate mutase I precursor K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D AGREI_1365 Arogenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AGREI_0267 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D AGREI_0574 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AGREI_1318 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AGREI_3227 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:agx00410]
D AGREI_1838 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_2781 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0337 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_1012 Taurine---2-oxoglutarate transaminase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D AGREI_2782 maoII; Copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D AGREI_2632 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AGREI_1006 hyuA; D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AGREI_1005 N-carbamoylputrescine amidase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D AGREI_2675 Acyl-coenzyme A oxidase 1, peroxisomal K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D AGREI_2065 bauC; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AGREI_0141 iolA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:agx00430]
D AGREI_2886 ald; L-alanine dehydrogenase (NAD-dependent) K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D AGREI_1012 Taurine---2-oxoglutarate transaminase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D AGREI_0714 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AGREI_0715 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:agx00440]
D AGREI_3327 phnI; carbon-phosphorus lyase complex subunit K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D AGREI_3329 phnG; Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D AGREI_3328 PhnH protein K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D AGREI_3324 phnL; carbon-phosphorus lyase complex subunit K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D AGREI_3322 phnM; carbon-phosphorus lyase complex subunit K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D AGREI_3326 phnJ; carbon-phosphorus lyase complex subunit K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
C 00450 Selenocompound metabolism [PATH:agx00450]
D AGREI_0614 mccB; cystathionine gamma-lyase and homocysteine gamma-lyase for reverse transsulfuration pathway K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AGREI_0647 Cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AGREI_2166 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AGREI_2719 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D AGREI_3421 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AGREI_1064 Aldehyde oxidase K12528 xdhD; putative selenate reductase molybdopterin-binding subunit
D AGREI_2156 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:agx00460]
D AGREI_2096 Glycoside hydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AGREI_2189 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AGREI_0260 bglA; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AGREI_2516 ansA; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AGREI_2342 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:agx00470]
D AGREI_1646 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_1647 Ala_racemase_C domain-containing protein K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_2393 Alanine racemase, N-terminal domain K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_2394 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_0944 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AGREI_3424 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AGREI_2717 purQ; phosphoribosylformylglycinamidine synthetase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AGREI_1945 rcmE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AGREI_1437 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AGREI_1313 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AGREI_1866 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:agx00480]
D AGREI_1092 Putative glutamate--cysteine ligase 2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D AGREI_0325 Putative glutamate--cysteine ligase 2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D AGREI_1652 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AGREI_1197 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AGREI_2349 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AGREI_2128 gndA; NADP+-dependent 6-P-gluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AGREI_0003 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AGREI_0884 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AGREI_1529 zwf; Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AGREI_2867 btuE; Thioredoxin/glutathione peroxidase BtuE K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:agx00515]
D AGREI_2159 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:agx00514]
D AGREI_2159 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:agx00511]
D AGREI_1377 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:agx00542]
D AGREI_1857 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:agx00541]
D AGREI_2234 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AGREI_0828 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AGREI_0848 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AGREI_0552 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AGREI_0814 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AGREI_0579 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AGREI_0560 dTDP-4-dehydrorhamnose 3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D AGREI_3176 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D AGREI_0845 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AGREI_0795 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AGREI_0779 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AGREI_0540 gmd; GDP-D-mannose dehydratase, NAD(P)-binding K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AGREI_0541 GDPmannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AGREI_2132 glmU; UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:agx00550]
D AGREI_0941 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AGREI_0412 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AGREI_1440 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AGREI_1437 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AGREI_1434 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AGREI_0944 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AGREI_3424 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AGREI_1435 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AGREI_1758 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AGREI_1490 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AGREI_1436 mraY; phospho-N-acetylmuramoyl-pentapeptide undecaprenyl phosphate (C55P) transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AGREI_1439 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AGREI_1433 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AGREI_0019 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D AGREI_1177 Peptidase_S11 domain-containing protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AGREI_1496 Peptidase_S11 domain-containing protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AGREI_0756 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AGREI_0747 Helicase/secretion neighborhood TadE-like protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_2525 protein of unknown function K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_0263 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_1649 conserved protein of unknown function K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:agx00552]
D AGREI_1490 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AGREI_1857 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AGREI_0810 Transcriptional attenuator, LytR family K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:agx00572]
D AGREI_1857 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AGREI_0817 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
C 00543 Exopolysaccharide biosynthesis [PATH:agx00543]
D AGREI_1857 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AGREI_2741 Glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AGREI_0107 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AGREI_1971 Glycosyl transferase family 2 K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:agx00730]
D AGREI_3199 Hydroxymethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AGREI_1143 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AGREI_3141 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AGREI_1634 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AGREI_3197 thiM; 5-(2-hydroxyethyl)-4-methylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D AGREI_3198 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AGREI_0957 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D AGREI_1913 Ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AGREI_1956 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AGREI_2417 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:agx00740]
D AGREI_0764 ribBA; fused 3,4-dihydroxy-2-butanone 4-phosphate synthase and GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AGREI_0766 ribD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AGREI_0271 Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D AGREI_0763 ribE; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AGREI_0765 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D AGREI_1802 ribF; Riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D AGREI_1408 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D AGREI_3197 thiM; 5-(2-hydroxyethyl)-4-methylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:agx00750]
D AGREI_1045 putative Pyridoxal 5'-phosphate synthase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D AGREI_2188 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D AGREI_3406 pdxI; Pyridoxine 4-dehydrogenase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D AGREI_2283 serC; Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AGREI_1864 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AGREI_1612 pdxS; glutamine amidotransferase for pyridoxal phosphate synthesis; pyridoxal 5'-phosphate synthase complex, synthase subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D AGREI_1611 pdxT; glutamine amidotransferase for pyridoxal phosphate synthesis; pyridoxal 5'-phosphate synthase complex, glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:agx00760]
D AGREI_3139 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AGREI_3138 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D AGREI_3140 nadC; nicotinate-nucleotide pyrophosphorylase (quinolinate phosphoribosyltransferase) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D AGREI_1946 pncB; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D AGREI_0796 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AGREI_0304 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AGREI_2748 hdpA; Dihydroxyacetone phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D AGREI_1243 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D AGREI_2010 NAD+ diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D AGREI_0027 nadE; ammonium-dependent NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D AGREI_1305 Competence/damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D AGREI_0757 pncA; Nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D AGREI_1356 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D AGREI_0759 sad; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:agx00770]
D AGREI_0897 ilvB; acetohydroxy-acid synthase (large subunit) K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AGREI_0898 ilvH; acetohydroxy-acid synthase (small subunit) K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AGREI_0899 ilvC; acetohydroxy-acid isomeroreductase (NADP-dependent) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AGREI_0896 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AGREI_P0078 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AGREI_1663 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D AGREI_1813 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AGREI_2632 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AGREI_2397 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D AGREI_1573 coaBC; Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D AGREI_0995 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D AGREI_1544 coaE; dephosphocoenzyme A kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D AGREI_2395 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AGREI_1836 ACPS domain-containing protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D AGREI_0912 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AGREI_1006 hyuA; D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AGREI_1005 N-carbamoylputrescine amidase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
C 00780 Biotin metabolism [PATH:agx00780]
D AGREI_1735 fabF; beta-ketoacyl-acyl carrier protein synthase II (involved in pimelate synthesis) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AGREI_1510 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_2519 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_2520 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_0806 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:agx00785]
D AGREI_1083 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D AGREI_1084 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D AGREI_0254 Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_1729 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AGREI_1654 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AGREI_1909 kgd; 2-oxoglutarate dehydrogenase E1 component / Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D AGREI_3226 bkdA; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D AGREI_3225 pdhB; pyruvate dehydrogenase (E1 beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D AGREI_3224 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D AGREI_2054 gcvP; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AGREI_2056 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AGREI_2055 gcvH; glycine cleavage complex lipoylprotein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:agx00790]
D AGREI_2639 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D AGREI_1956 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AGREI_2637 Dihydroneopterin aldolase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D AGREI_0924 folP; Inactive dihydropteroate synthase 2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AGREI_2638 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AGREI_0691 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AGREI_1231 folC; Dihydrofolate synthase/folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AGREI_0764 ribBA; fused 3,4-dihydroxy-2-butanone 4-phosphate synthase and GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AGREI_0016 trpG; Anthranilate synthase component 2 K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D AGREI_1277 Anthranilate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D AGREI_1960 Aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D AGREI_0029 Aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D AGREI_1074 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AGREI_1068 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AGREI_1066 moaE; Molybdopterin synthase catalytic subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AGREI_1069 moaE; Molybdopterin molybdenumtransferase 2 K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AGREI_2901 Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:agx00670]
D AGREI_0691 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AGREI_2341 folD; Methylenetetrahydrofolate dehydrogenase / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AGREI_2342 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AGREI_2358 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AGREI_2357 purH; fused phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AGREI_1570 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AGREI_2056 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AGREI_0690 thyB; thymidylate synthase B K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AGREI_2346 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AGREI_2235 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:agx00860]
D AGREI_0915 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AGREI_0078 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D AGREI_0091 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AGREI_0090 hemB; delta-aminolevulinic acid dehydratase (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AGREI_0088 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D AGREI_0089 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D AGREI_0079 hemE; uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D AGREI_0080 Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D AGREI_0087 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D AGREI_1525 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AGREI_1524 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AGREI_1059 putative VWFA domain-containing protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D AGREI_1060 bchI; Magnesium-chelatase 38 kDa subunit K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D AGREI_2223 conserved protein of unknown function K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D AGREI_3136 Heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D AGREI_2817 F420H(2)-dependent biliverdin reductase K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:agx00130]
D AGREI_0389 menG; Demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D AGREI_0388 Isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D AGREI_0382 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D AGREI_0678 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D AGREI_0370 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D AGREI_0375 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D AGREI_0372 menB; dihydroxynapthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D AGREI_0376 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D AGREI_3106 Cytosine deaminase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D AGREI_0928 protein of unknown function K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AGREI_0629 ytfG; NAD(P)H:quinone oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AGREI_1111 NAD(P)-dependent oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:agx00900]
D AGREI_1634 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AGREI_1831 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D AGREI_2307 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D AGREI_2148 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D AGREI_1827 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D AGREI_2070 ispH; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AGREI_2806 idi; isopentenyl diphosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D AGREI_2805 Geranylgeranyl diphosphate synthase, type II K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D AGREI_1428 Geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D AGREI_2079 uppS; Isoprenyl transferase 2 K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D AGREI_1758 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:agx00906]
D AGREI_2804 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:agx00907]
D AGREI_1632 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D AGREI_1527 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:agx00523]
D AGREI_0814 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AGREI_0579 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AGREI_0560 dTDP-4-dehydrorhamnose 3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D AGREI_0834 wbiB; dTDP-L-rhamnose 4-epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
D AGREI_0055 NAD-dependent dehydratase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D AGREI_0388 Isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D AGREI_0579 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:agx00946]
D AGREI_2096 Glycoside hydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AGREI_2189 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AGREI_0260 bglA; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
D AGREI_1041 uox; Uricase K00365 uaZ; urate oxidase [EC:1.7.3.3]
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:agx00311]
D AGREI_3286 axeA; Cephalosporin-C deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D AGREI_0108 axeA; Cephalosporin-C deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D AGREI_2918 penP; beta-lactamase precursor (putative hydrolase) K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AGREI_0065 Serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:agx00332]
D AGREI_1240 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AGREI_1241 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:agx00261]
D AGREI_0722 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AGREI_0723 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AGREI_1300 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AGREI_1765 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:agx00521]
D AGREI_1801 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AGREI_2946 cutC; Copper homeostasis protein CutC K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_0293 Predicted N-acetyl-glucosamine kinase 2, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_1422 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_0266 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AGREI_0109 Myo-inositol-1(Or 4)-monophosphatase/deoxyribonuclease-2 K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AGREI_0209 Myo-inositol-1(Or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AGREI_0402 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AGREI_0145 iolG; Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AGREI_0814 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AGREI_0579 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AGREI_0560 dTDP-4-dehydrorhamnose 3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D AGREI_1801 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AGREI_2946 cutC; Copper homeostasis protein CutC K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_0293 Predicted N-acetyl-glucosamine kinase 2, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D AGREI_1422 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:agx00525]
D AGREI_0814 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AGREI_0579 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:agx00401]
D AGREI_1365 Arogenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AGREI_0574 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AGREI_1318 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AGREI_3227 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D AGREI_1563 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D AGREI_1732 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AGREI_1510 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_2519 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_2520 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D AGREI_1734 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:agx00999]
D AGREI_1572 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AGREI_2096 Glycoside hydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AGREI_2189 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AGREI_0260 bglA; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:agx00362]
D AGREI_1632 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AGREI_2714 Catechol 2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D AGREI_2030 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D AGREI_0844 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D AGREI_1022 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_1889 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_2854 Acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00364 Fluorobenzoate degradation [PATH:agx00364]
D AGREI_3131 DLH domain-containing protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AGREI_0072 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:agx00625]
D AGREI_3117 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AGREI_2916 yycR; putative dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:agx00361]
D AGREI_3131 DLH domain-containing protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AGREI_0072 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AGREI_2714 Catechol 2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:agx00623]
D AGREI_3131 DLH domain-containing protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AGREI_0072 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:agx00622]
D AGREI_2714 Catechol 2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation [PATH:agx00633]
D AGREI_0097 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D AGREI_1632 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:agx00643]
D AGREI_1022 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_1889 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_2854 Acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AGREI_2714 Catechol 2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:agx00626]
D AGREI_3117 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D AGREI_3399 ophA; Phthalate dioxygenase reductase K18069 pht2; phthalate 4,5-dioxygenase reductase component [EC:1.18.1.-]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:agx03020]
D AGREI_2463 rpoB; RNA polymerase (beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AGREI_2462 rpoC; RNA polymerase (beta' subunit) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AGREI_2403 rpoA; RNA polymerase (alpha subunit) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AGREI_1574 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D AGREI_2288 Helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:agx03010]
D AGREI_1545 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AGREI_1123 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AGREI_2433 rpsC; ribosomal protein S3 (BS3) K02982 RP-S3; small subunit ribosomal protein S3
D AGREI_1597 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AGREI_2422 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AGREI_3412 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D AGREI_2447 rpsG; ribosomal protein S7 (BS7) K02992 RP-S7; small subunit ribosomal protein S7
D AGREI_2425 rpsH; ribosomal protein S8 (BS8) K02994 RP-S8; small subunit ribosomal protein S8
D AGREI_2399 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AGREI_2440 rpsJ; ribosomal protein S10 (BS13); transcription antitermination factor K02946 RP-S10; small subunit ribosomal protein S10
D AGREI_2404 rpsK; ribosomal protein S11 (BS11) K02948 RP-S11; small subunit ribosomal protein S11
D AGREI_2448 rpsL; ribosomal protein S12 (BS12) K02950 RP-S12; small subunit ribosomal protein S12
D AGREI_2405 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AGREI_3146 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AGREI_1776 rpsO; ribosomal protein S15 (BS18) K02956 RP-S15; small subunit ribosomal protein S15
D AGREI_1094 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AGREI_2429 rpsQ; ribosomal protein S17 (BS16) K02961 RP-S17; small subunit ribosomal protein S17
D AGREI_3410 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AGREI_2435 rpsS; ribosomal protein S19 (BS19) K02965 RP-S19; small subunit ribosomal protein S19
D AGREI_1284 rpsT; ribosomal protein S20 (BS20) K02968 RP-S20; small subunit ribosomal protein S20
D AGREI_0583 rplA; ribosomal protein L1 (BL1) K02863 RP-L1; large subunit ribosomal protein L1
D AGREI_2436 rplB; ribosomal protein L2 (BL2) K02886 RP-L2; large subunit ribosomal protein L2
D AGREI_2439 rplC; ribosomal protein L3 (BL3) K02906 RP-L3; large subunit ribosomal protein L3
D AGREI_2438 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AGREI_2426 rplE; ribosomal protein L5 (BL6) K02931 RP-L5; large subunit ribosomal protein L5
D AGREI_2424 rplF; ribosomal protein L6 (BL8) K02933 RP-L6; large subunit ribosomal protein L6
D AGREI_0604 rplL; ribosomal protein L12 (BL9) K02935 RP-L7; large subunit ribosomal protein L7/L12
D AGREI_3409 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AGREI_0603 rplJ; ribosomal protein L10 (BL5) K02864 RP-L10; large subunit ribosomal protein L10
D AGREI_0582 rplK; ribosomal protein L11 (BL11) K02867 RP-L11; large subunit ribosomal protein L11
D AGREI_2400 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AGREI_2428 rplNA; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AGREI_2420 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AGREI_2431 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AGREI_2402 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AGREI_2423 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AGREI_1102 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AGREI_1326 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AGREI_1237 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AGREI_2434 rplV; ribosomal protein L22 (BL17) K02890 RP-L22; large subunit ribosomal protein L22
D AGREI_2437 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AGREI_2427 rplX; ribosomal protein L24 (BL23) K02895 RP-L24; large subunit ribosomal protein L24
D AGREI_2123 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D AGREI_1238 rpmA; ribosomal protein L27 (BL24) K02899 RP-L27; large subunit ribosomal protein L27
D AGREI_3148 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AGREI_2430 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D AGREI_2421 rpmD; ribosomal protein L30 (BL27) K02907 RP-L30; large subunit ribosomal protein L30
D AGREI_1505 rpmEB; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AGREI_1015 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AGREI_3147 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AGREI_3436 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AGREI_1325 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AGREI_2406 rpmJ; ribosomal protein L36 (ribosomal protein B) K02919 RP-L36; large subunit ribosomal protein L36
D AGREI_0245 putative ribosome maturation protein K02919 RP-L36; large subunit ribosomal protein L36
D AGREI_RRNA1 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AGREI_RRNA6 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AGREI_RRNA5 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AGREI_RRNA2 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AGREI_RRNA4 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AGREI_RRNA3 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:agx00970]
D AGREI_TRNA2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AGREI_TRNA33 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AGREI_TRNA18 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AGREI_TRNA6 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AGREI_TRNA16 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AGREI_TRNA23 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AGREI_TRNA32 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AGREI_TRNA37 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AGREI_TRNA27 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AGREI_TRNA41 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AGREI_TRNA14 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AGREI_TRNA34 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AGREI_TRNA15 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AGREI_TRNA26 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AGREI_TRNA43 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AGREI_TRNA29 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AGREI_TRNA40 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AGREI_TRNA44 tRNA-His K14226 tRNA-His; tRNA His
D AGREI_TRNA1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AGREI_TRNA3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AGREI_TRNA20 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AGREI_TRNA21 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AGREI_TRNA35 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AGREI_TRNA24 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AGREI_TRNA25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AGREI_TRNA13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AGREI_TRNA36 tRNA-Met K14230 tRNA-Met; tRNA Met
D AGREI_TRNA38 tRNA-Met K14230 tRNA-Met; tRNA Met
D AGREI_TRNA9 tRNA-Met K14230 tRNA-Met; tRNA Met
D AGREI_TRNA28 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AGREI_TRNA17 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AGREI_TRNA45 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AGREI_TRNA19 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AGREI_TRNA4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AGREI_TRNA5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AGREI_TRNA11 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AGREI_TRNA30 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AGREI_TRNA12 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AGREI_TRNA31 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AGREI_TRNA8 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AGREI_TRNA10 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AGREI_TRNA7 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AGREI_TRNA42 tRNA-Val K14237 tRNA-Val; tRNA Val
D AGREI_TRNA22 tRNA-Val K14237 tRNA-Val; tRNA Val
D AGREI_TRNA39 tRNA-Val K14237 tRNA-Val; tRNA Val
D AGREI_0915 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AGREI_1152 gatA; glutamyl-tRNA(Gln) amidotransferase (subunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AGREI_1153 gatB; glutamyl-tRNA(Gln) amidotransferase (subunit B) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AGREI_1151 gatC; glutamyl-tRNA(Gln) amidotransferase (subunit C) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AGREI_1593 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AGREI_3407 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AGREI_1941 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AGREI_2690 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AGREI_1614 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AGREI_0270 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AGREI_2306 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AGREI_2156 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AGREI_1570 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AGREI_1219 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AGREI_1280 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AGREI_1230 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AGREI_2629 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AGREI_1869 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AGREI_1819 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AGREI_2117 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AGREI_1332 pheS; phenylalanyl-tRNA synthetase (alpha subunit) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AGREI_1333 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AGREI_1343 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AGREI_0771 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AGREI_3108 trpS; Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:agx03060]
D AGREI_2418 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D AGREI_0580 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AGREI_1533 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D AGREI_1605 secD; Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AGREI_1604 secF; Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AGREI_1606 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D AGREI_1164 conserved membrane protein of unknown function K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AGREI_3433 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AGREI_0870 secA; translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AGREI_1089 ffh; signal recognition particle-like (SRP) GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AGREI_MISCRNA4 Bacteria_small_SRP K01983 ffs; SRP RNA
D AGREI_1085 ftsY; signal recognition particle (docking protein) K03110 ftsY; fused signal recognition particle receptor
D AGREI_1481 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D AGREI_3030 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D AGREI_2032 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D AGREI_3032 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D AGREI_1480 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D AGREI_3031 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D AGREI_1103 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AGREI_1447 Lipoprotein signal peptidase (modular protein) K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AGREI_2549 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AGREI_2576 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AGREI_0489 S26 family signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D AGREI_0712 Signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D AGREI_1032 Signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:agx04122]
D AGREI_1143 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AGREI_3141 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AGREI_1627 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AGREI_1149 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AGREI_1066 moaE; Molybdopterin synthase catalytic subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AGREI_1074 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AGREI_1075 conserved protein of unknown function K03636 moaD; sulfur-carrier protein
D AGREI_1078 moeZ; Sulfur carrier protein CysO adenylyltransferase / Sulfur carrier protein CysO sulfurtransferase K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D AGREI_1068 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome
C 03018 RNA degradation [PATH:agx03018]
D AGREI_1235 Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D AGREI_2114 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_P0082 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_1769 pnpA; polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AGREI_1386 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AGREI_2100 ATP-dependent DNA helicase, RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AGREI_2678 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AGREI_1862 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AGREI_1301 rnj; Ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AGREI_2796 dnaK; molecular chaperone, ATP-dependent K04043 dnaK; molecular chaperone DnaK
D AGREI_2293 groEL; chaperonin large subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AGREI_2322 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AGREI_1203 Polyphosphate:GDP phosphotransferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AGREI_0218 pkk2A; putative polyphosphate kinase PKK2A K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AGREI_3418 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:agx03030]
D AGREI_1504 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AGREI_2064 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AGREI_1449 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AGREI_0719 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AGREI_0752 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AGREI_1283 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AGREI_0002 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AGREI_3408 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AGREI_1752 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AGREI_1188 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_3411 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_P0053 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_0371 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AGREI_1104 Ribonuclease K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AGREI_1548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AGREI_1150 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:agx03410]
D AGREI_1891 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AGREI_1812 mutY; Adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AGREI_1340 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D AGREI_1017 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AGREI_2220 Endonuclease VIII K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AGREI_1199 Formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D AGREI_2479 nei; putative endonuclease 8 2 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D AGREI_0925 putative DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AGREI_1278 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AGREI_1845 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AGREI_0772 Exodeoxyribonuclease-3 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AGREI_2753 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AGREI_1548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AGREI_1150 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:agx03420]
D AGREI_2120 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AGREI_1541 uvrA; excinuclease ABC (subunit A) K03701 uvrA; excinuclease ABC subunit A
D AGREI_3066 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D AGREI_1542 uvrB; excinuclease ABC (subunit B) K03702 uvrB; excinuclease ABC subunit B
D AGREI_1540 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D AGREI_2009 uvrD; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AGREI_2012 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AGREI_2367 uvrD; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AGREI_1548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AGREI_1150 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AGREI_2288 Helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:agx03430]
D AGREI_2009 uvrD; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AGREI_2012 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AGREI_2367 uvrD; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AGREI_2071 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AGREI_2072 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AGREI_1188 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_3411 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_P0053 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_1449 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AGREI_0002 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AGREI_0719 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AGREI_1283 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AGREI_0752 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AGREI_1504 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AGREI_2064 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AGREI_1150 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:agx03440]
D AGREI_1188 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_3411 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_P0053 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_0004 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D AGREI_1759 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AGREI_0720 recR; recA filament-DNA complex stabilisation factor K06187 recR; recombination protein RecR
D AGREI_1309 recA; multifunctional SOS repair factor K03553 recA; recombination protein RecA
D AGREI_1548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AGREI_1608 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AGREI_1607 ruvB; Holliday junction DNA helicase, ATP-dependent component K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AGREI_1609 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AGREI_0959 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AGREI_2541 TrwC domain-containing protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AGREI_1449 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AGREI_0002 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AGREI_0719 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AGREI_1283 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AGREI_0752 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AGREI_1504 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AGREI_2064 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AGREI_1571 priA; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:agx03450]
D AGREI_2200 ku; Non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku
D AGREI_2201 ligD; DNA repair polymerase / 3'-phosphoesterase / DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:agx03250]
D AGREI_0011 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:agx02010]
D AGREI_1071 modA; Molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D AGREI_1072 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D AGREI_1073 ABC transporter domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AGREI_1392 protein of unknown function K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AGREI_1268 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) K05845 opuC; osmoprotectant transport system substrate-binding protein
D AGREI_0118 opuCC; Glycine betaine/carnitine/choline-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D AGREI_1266 Osmoprotectant transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D AGREI_1267 Glycine betaine ABC transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D AGREI_0115 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D AGREI_0117 Osmoprotectant transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D AGREI_1265 Osmoprotectant transport system ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AGREI_0116 opuCA; glycine betaine/carnitine/choline/choline ABC transporter (ATP-binding protein) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AGREI_2303 msmX; multiple sugar (maltodextrins) transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_1981 Multiple sugar ABC transporter, substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AGREI_2003 Extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AGREI_0295 Carbohydrate ABC transporter substrate-binding protein, CUT1 family K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AGREI_0482 Sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AGREI_1982 Carbohydrate ABC transporter membrane protein 1, CUT1 family K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AGREI_2002 Sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AGREI_0296 Carbohydrate ABC transporter membrane protein 1, CUT1 family K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AGREI_0483 Carbohydrate ABC transporter membrane protein 1, CUT1 family K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AGREI_2001 Carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AGREI_0297 Carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AGREI_0484 Thiamine ABC transporter ATP-binding protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AGREI_1983 Carbohydrate ABC transporter membrane protein 2, CUT1 family K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AGREI_0608 Alpha-glucosides-binding periplasmic protein AglE precursor K10232 aglE; alpha-glucoside transport system substrate-binding protein
D AGREI_0610 Alpha-glucoside transport system permease protein K10233 aglF; alpha-glucoside transport system permease protein
D AGREI_0611 Alpha-glucoside transport system permease protein AglG K10234 aglG; alpha-glucoside transport system permease protein
D AGREI_0565 chvE; Multiple sugar-binding periplasmic receptor ChvE K10546 chvE; putative multiple sugar transport system substrate-binding protein
D AGREI_0661 chvE; Multiple sugar-binding periplasmic receptor ChvE K10546 chvE; putative multiple sugar transport system substrate-binding protein
D AGREI_0665 chvE; Multiple sugar-binding periplasmic receptor ChvE K10546 chvE; putative multiple sugar transport system substrate-binding protein
D AGREI_0567 Multiple monosaccharide ABC transporter membrane protein K10547 gguB; putative multiple sugar transport system permease protein
D AGREI_0660 Sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D AGREI_0667 xylH; Xylose transport system permease protein XylH K10547 gguB; putative multiple sugar transport system permease protein
D AGREI_0566 xylG; fused D-xylose transporter subunits of ABC superfamily: ATP-binding components K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_0568 putative enzyme K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_0659 xylG; fused D-xylose transporter subunits of ABC superfamily: ATP-binding components K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_0666 rbsA; ribose ABC transporter (ATP-binding protein) K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_0780 Nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AGREI_0781 Nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AGREI_2153 Nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AGREI_0783 Nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein
D AGREI_2151 putative Glucose ABC transporter permease protein TsgB13 K23535 nupB; general nucleoside transport system permease protein
D AGREI_0784 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AGREI_2150 Nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D AGREI_0782 nupO; guanosine ABC transporter (ATP-binding protein) K23537 nupA; general nucleoside transport system ATP-binding protein
D AGREI_2152 yufO; Uncharacterized ABC transporter ATP-binding protein YufO K23537 nupA; general nucleoside transport system ATP-binding protein
D AGREI_0279 Allose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AGREI_2958 Ribose transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AGREI_0280 rbsC; ribose ABC transporter (permease) K10440 rbsC; ribose transport system permease protein
D AGREI_2956 rbsC; ribose ABC transporter (permease) K10440 rbsC; ribose transport system permease protein
D AGREI_0281 frcA; Fructose import ATP-binding protein FrcA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AGREI_2957 putative ribose/galactose/methyl galactoside import ATP-binding protein 1 K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AGREI_3368 fruE; Fructose import binding protein FruE K23508 ytfQ; galactofuranose transport system substrate-binding protein
D AGREI_3365 rbsC; ribose ABC transporter (permease) K23509 ytfT; galactofuranose transport system permease protein
D AGREI_3366 fruF; Fructose import permease protein FruF K23509 ytfT; galactofuranose transport system permease protein
D AGREI_3367 ytfR; putative sugar transporter subunit: ATP-binding component of ABC superfamily K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D AGREI_3369 ytfR; putative sugar transporter subunit: ATP-binding component of ABC superfamily K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D AGREI_3205 frcB; Fructose import binding protein FrcB K10552 frcB; fructose transport system substrate-binding protein
D AGREI_3204 rbsC; ribose ABC transporter (permease) K10553 frcC; fructose transport system permease protein
D AGREI_3203 frcA; Fructose import ATP-binding protein FrcA K10554 frcA; fructose transport system ATP-binding protein
D AGREI_0212 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AGREI_0210 SN-glycerol-3-phosphate transport system permease protein ugpA (TC 3.A.1.1.3) K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AGREI_0211 SN-glycerol-3-phosphate transport system permease protein ugpE (TC 3.A.1.1.3) K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AGREI_0361 Phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AGREI_2324 Phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AGREI_2325 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D AGREI_0359 Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D AGREI_2326 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D AGREI_0360 ABC transmembrane type-1 domain-containing protein K02038 pstA; phosphate transport system permease protein
D AGREI_2327 pstBA; phosphate ABC transporter (ATP-binding protein) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AGREI_0363 pstB; Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AGREI_2266 Phosphonate transport system substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AGREI_3297 Phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AGREI_2263 Phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D AGREI_2264 Phosphonate transport system permease protein K02042 phnE; phosphonate transport system permease protein
D AGREI_3299 Phosphate starvation-inducible protein PhoH K02042 phnE; phosphonate transport system permease protein
D AGREI_2265 phnC; phosphonate/organophosphate ester transporter subunit; ATP-binding component of ABC superfamily K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AGREI_3298 phnC; phosphonate/organophosphate ester transporter subunit; ATP-binding component of ABC superfamily K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AGREI_1329 gluB; Glutamate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D AGREI_2950 Glutamate transport system substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D AGREI_1330 glnM; glutamine ABC transporter (permease) K10006 gluC; glutamate transport system permease protein
D AGREI_2949 Amino acid ABC transporter membrane protein 1, PAAT family K10006 gluC; glutamate transport system permease protein
D AGREI_1331 Amino acid ABC transporter membrane protein 2, PAAT family K10007 gluD; glutamate transport system permease protein
D AGREI_2948 gluD; Glutamate transport system permease protein GluD K10007 gluD; glutamate transport system permease protein
D AGREI_1328 glnQ; glutamine ABC transporter (ATP-binding protein) K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D AGREI_2951 glnQ; glutamine ABC transporter (ATP-binding protein) K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D AGREI_2250 tcyA; cystine ABC transporter (substrate-binding lipoprotein) K02424 tcyA; L-cystine transport system substrate-binding protein
D AGREI_2249 tcyB; cystine ABC transporter (permease) K10009 tcyB; L-cystine transport system permease protein
D AGREI_2248 tcyC; cystine ABC transporter (ATP-binding protein) K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D AGREI_2383 Amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AGREI_2379 Amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D AGREI_2380 Amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D AGREI_2381 Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AGREI_2382 braG; High-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AGREI_0635 metQ; DL-methionine transporter subunit; periplasmic-binding component of ABC superfamily K02073 metQ; D-methionine transport system substrate-binding protein
D AGREI_0637 metP; methionine ABC transporter, permease component K02072 metI; D-methionine transport system permease protein
D AGREI_0636 metN; methionine ABC transporter (ATP-binding protein) K02071 metN; D-methionine transport system ATP-binding protein
D AGREI_2050 Oligopeptide transport system substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AGREI_2049 Oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D AGREI_2048 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D AGREI_2047 gsiA; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D AGREI_0396 exported protein of unknown function K25286 fagD; iron-siderophore transport system substrate-binding protein
D AGREI_0323 Iron complex transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D AGREI_2256 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D AGREI_3339 Iron complex transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D AGREI_0322 fepD; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23186 fepD; iron-siderophore transport system permease protein
D AGREI_0393 fepD; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23186 fepD; iron-siderophore transport system permease protein
D AGREI_2257 fepD; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23186 fepD; iron-siderophore transport system permease protein
D AGREI_3340 fepD; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23186 fepD; iron-siderophore transport system permease protein
D AGREI_0321 fepG; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23187 fepG; iron-siderophore transport system permease protein
D AGREI_0394 Iron complex transport system permease protein K23187 fepG; iron-siderophore transport system permease protein
D AGREI_2258 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D AGREI_3341 fepG; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23187 fepG; iron-siderophore transport system permease protein
D AGREI_0395 feuV; iron(III)-siderophore transporter (ATP binding component) K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D AGREI_2259 feuV; iron(III)-siderophore transporter (ATP binding component) K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D AGREI_1516 bioY; biotin transporter K03523 bioY; biotin transport system substrate-specific component
D AGREI_1512 Cobalt ABC transporter permease K16783 bioN; biotin transport system permease protein
D AGREI_1513 Biotin transport system ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D AGREI_1174 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine K16785 ecfT; energy-coupling factor transport system permease protein
D AGREI_3344 Putative ABC transport system permease protein K09813 hrtB; hemin transport system permease protein
D AGREI_3345 Putative ABC transport system ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D AGREI_1924 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AGREI_1925 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AGREI_2682 Multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D AGREI_2683 Fatty acid ABC transporter ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D AGREI_1275 ATP-binding cassette, subfamily C, CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AGREI_1274 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:agx02060]
D AGREI_2412 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AGREI_2413 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AGREI_2414 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AGREI_0793 PTS system, mannitol-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AGREI_0794 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AGREI_2862 PTS system, fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AGREI_2863 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:agx03070]
D AGREI_1605 secD; Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AGREI_1604 secF; Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AGREI_0580 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AGREI_1533 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D AGREI_2418 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D AGREI_1606 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D AGREI_1164 conserved membrane protein of unknown function K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AGREI_3433 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AGREI_0870 secA; translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AGREI_1085 ftsY; signal recognition particle (docking protein) K03110 ftsY; fused signal recognition particle receptor
D AGREI_1089 ffh; signal recognition particle-like (SRP) GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AGREI_1481 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D AGREI_3030 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D AGREI_2032 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D AGREI_3032 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D AGREI_1480 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D AGREI_3031 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:agx02020]
D AGREI_2738 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AGREI_1956 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AGREI_2311 senX; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D AGREI_2310 regX; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D AGREI_0361 Phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AGREI_2324 Phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AGREI_3115 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AGREI_3116 kdpE; DNA-binding response regulator in two-component regulatory system with KdpD K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AGREI_3112 kdpA; potassium translocating ATPase, subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D AGREI_3113 kdpB; potassium translocating ATPase, subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D AGREI_3114 kdpC; Potassium-transporting ATPase KdpC subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D AGREI_1524 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AGREI_3028 Histidine kinase domain-containing protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AGREI_2513 lsdA; Levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D AGREI_1972 PDZ domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D AGREI_0866 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D AGREI_0865 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D AGREI_0001 dnaA; chromosomal replication initiator informational ATPase K02313 dnaA; chromosomal replication initiator protein
D AGREI_0514 conserved membrane protein of unknown function K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D AGREI_3191 Histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D AGREI_3192 cutR; Transcriptional regulatory protein CutR K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D AGREI_0747 Helicase/secretion neighborhood TadE-like protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_2525 protein of unknown function K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_0263 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_1144 Endo/exonuclease/phosphatase domain-containing protein K18353 vanJ; vancomycin resistance protein VanJ
D AGREI_3034 Citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D AGREI_1260 Sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AGREI_3184 Two-component system, NarL family, sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AGREI_0183 Two-component system sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AGREI_1261 desR; Transcriptional regulatory protein DesR K07693 desR; two-component system, NarL family, response regulator DesR
D AGREI_3183 yvfU; two-component response regulator [YvfT] K07693 desR; two-component system, NarL family, response regulator DesR
D AGREI_0182 desR; Transcriptional regulatory protein DesR K07693 desR; two-component system, NarL family, response regulator DesR
D AGREI_0743 Type II/type IV pathway secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AGREI_1935 Pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AGREI_0744 T2SSF domain-containing protein K12510 tadB; tight adherence protein B
D AGREI_1934 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D AGREI_1933 Pilus assembly protein K12511 tadC; tight adherence protein C
D AGREI_0888 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1658 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1661 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AGREI_0600 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D AGREI_2837 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D AGREI_2938 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AGREI_P0059 conserved protein of unknown function K15012 regA; two-component system, response regulator RegA
D AGREI_1272 cydA; cytochrome bb' ubiquinol oxidase (subunit I) K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AGREI_1273 cydB; cytochrome bb' ubiquinol oxidase (subunit II) K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AGREI_3380 ptpA; Low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D AGREI_0538 Low molecular weight protein-tyrosine-phosphatase Wzb K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D AGREI_1398 Endoglucanase E1 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D AGREI_2744 Glucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D AGREI_1880 Arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:agx02024]
D AGREI_1563 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AGREI_0816 dTDP-rhamnosyl transferase RfbF K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D AGREI_0822 dTDP-rhamnosyl transferase RfbF K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D AGREI_1424 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AGREI_3116 kdpE; DNA-binding response regulator in two-component regulatory system with KdpD K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AGREI_2091 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AGREI_2967 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AGREI_0113 Polyamine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AGREI_2089 Putative spermidine/putrescine transport system permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AGREI_2965 ABC transmembrane type-1 domain-containing protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AGREI_2966 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AGREI_0111 Polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AGREI_2090 Putative spermidine/putrescine transport system permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AGREI_2088 fbpC; Fe(3+) ions import ATP-binding protein FbpC K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AGREI_2964 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AGREI_0110 Putative spermidine/putrescine transport system ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AGREI_2383 Amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AGREI_2379 Amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D AGREI_2380 Amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D AGREI_2381 Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AGREI_2382 braG; High-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AGREI_0463 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D AGREI_2455 40-residue YVTN family beta-propeller repeat-containing protein K20276 bapA; large repetitive protein
D AGREI_3398 Fibronectin type III domain-containing protein K20276 bapA; large repetitive protein
D AGREI_1157 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1421 fadD; Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1515 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2206 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2715 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2938 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AGREI_0766 ribD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AGREI_2050 Oligopeptide transport system substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AGREI_2049 Oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D AGREI_2048 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D AGREI_2047 gsiA; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D AGREI_1223 Peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AGREI_1751 Peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AGREI_2194 Peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AGREI_2842 Peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AGREI_1224 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AGREI_1750 Peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AGREI_2193 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AGREI_2841 ddpB; D-ala-D-ala transporter subunit; membrane component of ABC superfamily K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AGREI_1225 Peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AGREI_1749 Peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AGREI_2192 Peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AGREI_2840 appC; oligopeptide ABC transporter (permease) K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AGREI_1226 yliA; putative peptide transport fused subunits of ABC superfamily: ATP-binding components K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AGREI_1748 gsiA; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AGREI_2191 Glutathione ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AGREI_2839 dppD; dipeptide ABC transporter (ATP-binding subunit) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AGREI_2838 oppF; oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AGREI_1164 conserved membrane protein of unknown function K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AGREI_3433 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AGREI_0580 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AGREI_1533 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D AGREI_2418 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D AGREI_1606 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D AGREI_0870 secA; translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AGREI_1085 ftsY; signal recognition particle (docking protein) K03110 ftsY; fused signal recognition particle receptor
D AGREI_1089 ffh; signal recognition particle-like (SRP) GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AGREI_3006 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D AGREI_0279 Allose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AGREI_2958 Ribose transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:agx02040]
D AGREI_P0066 protein of unknown function K02388 flgC; flagellar basal-body rod protein FlgC
D AGREI_2250 tcyA; cystine ABC transporter (substrate-binding lipoprotein) K02424 tcyA; L-cystine transport system substrate-binding protein
D AGREI_1650 hrdB; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D AGREI_2114 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_P0082 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:agx01501]
D AGREI_2050 Oligopeptide transport system substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AGREI_2049 Oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D AGREI_2048 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D AGREI_2047 gsiA; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D AGREI_1270 Peptidase family M48 K02172 blaR1; bla regulator protein blaR1
D AGREI_1271 blaI; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D AGREI_2918 penP; beta-lactamase precursor (putative hydrolase) K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AGREI_0065 Serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AGREI_1207 Transcriptional regulator, TetR family K18130 nalC; TetR/AcrR family transcriptional regulator, transcriptional repressor NalC
D AGREI_1433 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:agx01502]
D AGREI_3191 Histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D AGREI_3192 cutR; Transcriptional regulatory protein CutR K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D AGREI_0944 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AGREI_3424 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AGREI_1646 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_1647 Ala_racemase_C domain-containing protein K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_2393 Alanine racemase, N-terminal domain K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_2394 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_1435 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AGREI_1436 mraY; phospho-N-acetylmuramoyl-pentapeptide undecaprenyl phosphate (C55P) transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AGREI_1439 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AGREI_0747 Helicase/secretion neighborhood TadE-like protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_2525 protein of unknown function K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_0263 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_1144 Endo/exonuclease/phosphatase domain-containing protein K18353 vanJ; vancomycin resistance protein VanJ
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:agx01503]
D AGREI_0011 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AGREI_0514 conserved membrane protein of unknown function K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:agx01000]
C 01001 Protein kinases [BR:agx01001]
D AGREI_0948 pknG; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D AGREI_0683 putative Mitogen-activated protein kinase kinase kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AGREI_1425 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AGREI_1655 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AGREI_2272 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AGREI_0017 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AGREI_0018 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AGREI_0074 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AGREI_0366 PASTA domain, binds beta-lactams K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AGREI_0537 Capsular exopolysaccharide family K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D AGREI_2738 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AGREI_2311 senX; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D AGREI_3115 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AGREI_3028 Histidine kinase domain-containing protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AGREI_0866 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D AGREI_3191 Histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D AGREI_0599 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AGREI_2291 Two-component system, OmpR family, sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AGREI_0405 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AGREI_1260 Sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AGREI_3184 Two-component system, NarL family, sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AGREI_0183 Two-component system sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AGREI_2836 Sensor histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D AGREI_2972 Signal transduction histidine kinase CitA regulating citrate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D AGREI_0876 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:agx01009]
D AGREI_0855 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AGREI_3107 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AGREI_2736 Molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AGREI_1842 PPM-type phosphatase domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D AGREI_2457 Protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D AGREI_3393 PPM-type phosphatase domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D AGREI_0021 Serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D AGREI_1509 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:agx01002]
D AGREI_1447 Lipoprotein signal peptidase (modular protein) K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AGREI_2549 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AGREI_2576 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AGREI_2076 membrane protein of unknown function K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AGREI_2371 guaA; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AGREI_0889 Putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D AGREI_1877 Glutamine amidotransferase type-1 domain-containing protein K07010 K07010; putative glutamine amidotransferase
D AGREI_1253 conserved exported protein of unknown function K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AGREI_1493 NLPC_P60 domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AGREI_2280 NLPC_P60 domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AGREI_2777 NLPC_P60 domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AGREI_2708 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AGREI_1556 gltA; glutamate synthase (large subunit, NADP-dependent) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AGREI_2396 glmS; L-glutamine-D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AGREI_0014 Sortase A K07284 srtA; sortase A [EC:3.4.22.70]
D AGREI_0362 conserved membrane protein of unknown function K07284 srtA; sortase A [EC:3.4.22.70]
D AGREI_0532 conserved membrane protein of unknown function K07052 K07052; CAAX protease family protein
D AGREI_2051 CAAX protease K07052 K07052; CAAX protease family protein
D AGREI_3218 membrane protein of unknown function K07052 K07052; CAAX protease family protein
D AGREI_1197 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AGREI_0057 Putative endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D AGREI_0747 Helicase/secretion neighborhood TadE-like protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_2525 protein of unknown function K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_0263 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_0444 putative Peptidase_M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D AGREI_1652 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AGREI_2036 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AGREI_1024 N-carbamoyl-L-amino acid hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D AGREI_0589 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AGREI_1100 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AGREI_2416 mapA; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AGREI_2020 pepP; Xaa-Pro aminopeptidase 2 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AGREI_2846 pepP; Xaa-Pro aminopeptidase 2 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AGREI_2640 ftsH; ATP-dependent cytoplasmic membrane protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AGREI_2093 htpX; Protease HtpX homolog K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D AGREI_1270 Peptidase family M48 K02172 blaR1; bla regulator protein blaR1
D AGREI_1782 Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family K24131 prsW; protease PrsW [EC:3.4.-.-]
D AGREI_1972 PDZ domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D AGREI_1787 dapb; Dipeptidyl aminopeptidase BI K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D AGREI_1177 Peptidase_S11 domain-containing protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AGREI_1496 Peptidase_S11 domain-containing protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AGREI_0756 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AGREI_1211 clpP; ATP-dependent Clp protease proteolytic subunit; Maxwell's demon K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AGREI_1212 clpP; ATP-dependent Clp protease proteolytic subunit; Maxwell's demon K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AGREI_2006 Endopeptidase La K07177 K07177; Lon-like protease
D AGREI_1316 lexA; transcriptional repressor of the SOS regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
D AGREI_1103 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AGREI_0489 S26 family signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D AGREI_0712 Signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D AGREI_1032 Signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D AGREI_2670 pip; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AGREI_1892 Peptidase S51 K13282 cphB; cyanophycinase [EC:3.4.15.6]
C 01003 Glycosyltransferases [BR:agx01003]
D AGREI_0767 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D AGREI_2159 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D AGREI_0049 conserved membrane protein of unknown function K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D AGREI_0778 mgtA; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D AGREI_1507 glgM; Alpha-maltose-1-phosphate synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D AGREI_1857 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AGREI_2513 lsdA; Levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D AGREI_0048 conserved membrane protein of unknown function K14340 K14340; mannosyltransferase [EC:2.4.1.-]
D AGREI_0198 Mannosyltransferase K14340 K14340; mannosyltransferase [EC:2.4.1.-]
D AGREI_1971 Glycosyl transferase family 2 K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D AGREI_0817 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D AGREI_2741 Glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AGREI_0894 otsA; Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:agx01005]
D AGREI_0816 dTDP-rhamnosyl transferase RfbF K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D AGREI_0822 dTDP-rhamnosyl transferase RfbF K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D AGREI_1857 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:agx01011]
D AGREI_0941 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AGREI_0412 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AGREI_1440 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AGREI_1437 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AGREI_1434 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AGREI_0944 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AGREI_3424 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AGREI_1646 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_1647 Ala_racemase_C domain-containing protein K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_2393 Alanine racemase, N-terminal domain K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_2394 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AGREI_1945 rcmE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AGREI_1436 mraY; phospho-N-acetylmuramoyl-pentapeptide undecaprenyl phosphate (C55P) transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AGREI_1439 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AGREI_1490 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AGREI_3420 Proposed peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AGREI_1433 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AGREI_0019 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D AGREI_1177 Peptidase_S11 domain-containing protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AGREI_1496 Peptidase_S11 domain-containing protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AGREI_0756 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AGREI_0747 Helicase/secretion neighborhood TadE-like protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_2525 protein of unknown function K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_0263 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_1253 conserved exported protein of unknown function K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AGREI_1493 NLPC_P60 domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AGREI_2280 NLPC_P60 domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AGREI_2777 NLPC_P60 domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AGREI_0014 Sortase A K07284 srtA; sortase A [EC:3.4.22.70]
D AGREI_0362 conserved membrane protein of unknown function K07284 srtA; sortase A [EC:3.4.22.70]
D AGREI_1591 mltG; Endolytic murein transglycosylase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D AGREI_2579 conserved exported protein of unknown function K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:agx01004]
D AGREI_1732 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AGREI_1733 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AGREI_1735 fabF; beta-ketoacyl-acyl carrier protein synthase II (involved in pimelate synthesis) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AGREI_1510 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_2519 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_2520 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AGREI_2221 Lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D AGREI_0331 Lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D AGREI_1193 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D AGREI_0149 cytosolic long-chain acyl-CoA thioester hydrolase family protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D AGREI_0742 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_0122 4-hydroxybutyrate--CoA ligase 1 K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AGREI_1157 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1421 fadD; Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1515 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2206 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2715 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1423 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AGREI_2494 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AGREI_2677 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:agx01008]
D AGREI_1158 rppA; 1,3,6,8-tetrahydroxynaphthalene synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D AGREI_1159 Alkylresorcinol O-methyltransferase K16168 bpsB; methyltransferase
C 01006 Prenyltransferases [BR:agx01006]
D AGREI_1428 Geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D AGREI_2805 Geranylgeranyl diphosphate synthase, type II K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D AGREI_2079 uppS; Isoprenyl transferase 2 K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D AGREI_1758 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AGREI_2804 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D AGREI_1312 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AGREI_0376 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D AGREI_1525 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:agx01007]
D AGREI_0915 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AGREI_1343 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AGREI_0771 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AGREI_3108 trpS; Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AGREI_2306 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AGREI_1869 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AGREI_2156 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AGREI_1230 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AGREI_1219 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AGREI_1280 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AGREI_2629 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AGREI_1941 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AGREI_2117 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AGREI_2690 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AGREI_0270 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AGREI_1819 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AGREI_1614 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AGREI_1593 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AGREI_3407 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AGREI_1332 pheS; phenylalanyl-tRNA synthetase (alpha subunit) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AGREI_1333 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AGREI_0574 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AGREI_1976 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D AGREI_1318 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AGREI_3227 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AGREI_0647 Cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AGREI_0223 rocD; ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D AGREI_1337 argD; N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AGREI_1838 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_2781 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0337 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D AGREI_0091 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AGREI_0912 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AGREI_2283 serC; Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AGREI_1023 pucG; (S)-ureidoglycine-glyoxylate aminotransferase (PLP-dependent) K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D AGREI_3176 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:agx00194]
D AGREI_3223 2Fe-2S ferredoxin-type domain-containing protein K02639 petF; ferredoxin
D AGREI_1848 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AGREI_1849 atpD; ATP synthase (subunit beta, component F1) K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AGREI_1850 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AGREI_1851 atpA; ATP synthase (subunit alpha, component F1) K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AGREI_1852 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AGREI_1853 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AGREI_1854 atpE; F0 sector of membrane-bound ATP synthase, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AGREI_1855 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:agx03000]
D AGREI_2985 naeIM; Modification methylase NaeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AGREI_0925 putative DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AGREI_2696 Transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D AGREI_2172 Transcriptional regulator, DeoR family K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D AGREI_2864 Transcriptional repressor of the fructose operon, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D AGREI_2922 Transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D AGREI_2004 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AGREI_2195 Transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AGREI_2509 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AGREI_2515 degA; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AGREI_2960 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AGREI_3206 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AGREI_3277 rbsR; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AGREI_3291 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AGREI_0318 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AGREI_0481 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AGREI_2968 cytR; HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D AGREI_3330 Transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D AGREI_1053 HTH gntR-type domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D AGREI_2851 Lactate-responsive regulator LldR in Enterobacteria, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D AGREI_3021 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D AGREI_0586 Transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D AGREI_2870 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AGREI_1207 Transcriptional regulator, TetR family K18130 nalC; TetR/AcrR family transcriptional regulator, transcriptional repressor NalC
D AGREI_2844 HTH asnC-type domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AGREI_0553 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AGREI_3221 Transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AGREI_0373 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AGREI_0194 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AGREI_2793 hspR; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D AGREI_3151 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AGREI_1145 furA; Transcriptional regulator FurA K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D AGREI_3259 protein of unknown function K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D AGREI_2938 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AGREI_2560 Transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AGREI_P0071 Transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AGREI_0335 HTH arsR-type domain-containing protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AGREI_2563 ArsR family transcriptional regulator K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AGREI_P0074 ArsR family transcriptional regulator K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AGREI_2551 DNA-binding transcriptional regulator, ArsR family K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D AGREI_2590 Transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D AGREI_0128 ArsR family transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D AGREI_0241 ArsR family transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D AGREI_1221 Transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D AGREI_1307 Transcriptional regulator, contains XRE-family HTH domain K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D AGREI_0455 PadR domain-containing protein K10947 K10947; PadR family transcriptional regulator
D AGREI_2282 ideR; Iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D AGREI_2747 HTH dtxR-type domain-containing protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D AGREI_1271 blaI; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D AGREI_0806 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D AGREI_3181 Uncharacterized HTH-type transcriptional regulator AF_1793 K07729 K07729; putative transcriptional regulator
D AGREI_2849 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AGREI_0191 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AGREI_2415 Transcriptional antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D AGREI_0849 whiB; Transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D AGREI_0877 whiB; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D AGREI_2480 conserved protein of unknown function K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D AGREI_1713 ParB family chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AGREI_3428 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AGREI_P0065 ParB domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AGREI_2308 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D AGREI_3306 Transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D AGREI_0425 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D AGREI_1292 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D AGREI_1993 Transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D AGREI_1582 pyrR; transcriptional attenuator and uracil phosphoribosyltransferase activity K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AGREI_1200 Transcriptional regulator K07734 paiB; transcriptional regulator
D AGREI_2847 DksA C4-type domain-containing protein K06204 dksA; RNA polymerase-binding transcription factor
D AGREI_1452 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D AGREI_1430 mraZ; inhibitor of RsmH and transcriptional regulator K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:agx03021]
D AGREI_2288 Helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D AGREI_2403 rpoA; RNA polymerase (alpha subunit) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AGREI_2463 rpoB; RNA polymerase (beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AGREI_2462 rpoC; RNA polymerase (beta' subunit) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AGREI_1574 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AGREI_1650 hrdB; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
D AGREI_1911 sigR; ECF RNA polymerase sigma factor SigR K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AGREI_2329 sigK; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AGREI_3045 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AGREI_0093 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AGREI_2260 conserved protein of unknown function K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AGREI_1818 nusA; transcription translation coupling factor involved in Rho-dependent transcription termination K02600 nusA; transcription termination/antitermination protein NusA
D AGREI_1583 nusB; Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D AGREI_0581 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AGREI_0385 rsbQ; Sigma factor SigB regulation protein RsbQ K19707 rsbQ; sigma-B regulation protein RsbQ
D AGREI_2847 DksA C4-type domain-containing protein K06204 dksA; RNA polymerase-binding transcription factor
D AGREI_2084 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D AGREI_1862 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:agx03019]
D AGREI_1235 Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D AGREI_1016 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AGREI_1301 rnj; Ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AGREI_1179 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AGREI_1386 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AGREI_2100 ATP-dependent DNA helicase, RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AGREI_2678 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AGREI_2114 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_P0082 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_1769 pnpA; polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AGREI_1862 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AGREI_2796 dnaK; molecular chaperone, ATP-dependent K04043 dnaK; molecular chaperone DnaK
D AGREI_2293 groEL; chaperonin large subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AGREI_2322 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AGREI_1203 Polyphosphate:GDP phosphotransferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AGREI_0218 pkk2A; putative polyphosphate kinase PKK2A K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AGREI_3418 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D AGREI_1539 yvcJ; GTPase possibly involved in regulator sRNA degradation K06958 rapZ; RNase adapter protein RapZ
D AGREI_1479 RNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D AGREI_2186 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:agx03011]
D AGREI_1545 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AGREI_1123 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AGREI_2433 rpsC; ribosomal protein S3 (BS3) K02982 RP-S3; small subunit ribosomal protein S3
D AGREI_1597 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AGREI_2422 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AGREI_3412 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D AGREI_2447 rpsG; ribosomal protein S7 (BS7) K02992 RP-S7; small subunit ribosomal protein S7
D AGREI_2425 rpsH; ribosomal protein S8 (BS8) K02994 RP-S8; small subunit ribosomal protein S8
D AGREI_2399 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AGREI_2440 rpsJ; ribosomal protein S10 (BS13); transcription antitermination factor K02946 RP-S10; small subunit ribosomal protein S10
D AGREI_2404 rpsK; ribosomal protein S11 (BS11) K02948 RP-S11; small subunit ribosomal protein S11
D AGREI_2448 rpsL; ribosomal protein S12 (BS12) K02950 RP-S12; small subunit ribosomal protein S12
D AGREI_2405 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AGREI_3146 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AGREI_1776 rpsO; ribosomal protein S15 (BS18) K02956 RP-S15; small subunit ribosomal protein S15
D AGREI_1094 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AGREI_2429 rpsQ; ribosomal protein S17 (BS16) K02961 RP-S17; small subunit ribosomal protein S17
D AGREI_3410 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AGREI_2435 rpsS; ribosomal protein S19 (BS19) K02965 RP-S19; small subunit ribosomal protein S19
D AGREI_1284 rpsT; ribosomal protein S20 (BS20) K02968 RP-S20; small subunit ribosomal protein S20
D AGREI_0583 rplA; ribosomal protein L1 (BL1) K02863 RP-L1; large subunit ribosomal protein L1
D AGREI_2436 rplB; ribosomal protein L2 (BL2) K02886 RP-L2; large subunit ribosomal protein L2
D AGREI_2439 rplC; ribosomal protein L3 (BL3) K02906 RP-L3; large subunit ribosomal protein L3
D AGREI_2438 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AGREI_2426 rplE; ribosomal protein L5 (BL6) K02931 RP-L5; large subunit ribosomal protein L5
D AGREI_2424 rplF; ribosomal protein L6 (BL8) K02933 RP-L6; large subunit ribosomal protein L6
D AGREI_3409 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AGREI_0603 rplJ; ribosomal protein L10 (BL5) K02864 RP-L10; large subunit ribosomal protein L10
D AGREI_0582 rplK; ribosomal protein L11 (BL11) K02867 RP-L11; large subunit ribosomal protein L11
D AGREI_0604 rplL; ribosomal protein L12 (BL9) K02935 RP-L7; large subunit ribosomal protein L7/L12
D AGREI_2400 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AGREI_2428 rplNA; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AGREI_2420 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AGREI_2431 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AGREI_2402 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AGREI_2423 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AGREI_1102 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AGREI_1326 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AGREI_1237 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AGREI_2434 rplV; ribosomal protein L22 (BL17) K02890 RP-L22; large subunit ribosomal protein L22
D AGREI_2437 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AGREI_2427 rplX; ribosomal protein L24 (BL23) K02895 RP-L24; large subunit ribosomal protein L24
D AGREI_1238 rpmA; ribosomal protein L27 (BL24) K02899 RP-L27; large subunit ribosomal protein L27
D AGREI_3148 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AGREI_2430 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D AGREI_2421 rpmD; ribosomal protein L30 (BL27) K02907 RP-L30; large subunit ribosomal protein L30
D AGREI_1505 rpmEB; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AGREI_1015 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AGREI_3147 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AGREI_3436 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AGREI_1325 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AGREI_2406 rpmJ; ribosomal protein L36 (ribosomal protein B) K02919 RP-L36; large subunit ribosomal protein L36
D AGREI_0245 putative ribosome maturation protein K02919 RP-L36; large subunit ribosomal protein L36
D AGREI_2123 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D AGREI_RRNA4 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AGREI_RRNA3 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AGREI_RRNA1 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AGREI_RRNA6 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AGREI_RRNA5 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AGREI_RRNA2 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:agx03009]
D AGREI_1016 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AGREI_1179 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AGREI_1299 era; maturation of 16S RNA and assembly of 30S ribosomal subunit GTPase K03595 era; GTPase
D AGREI_1239 obgE; ppGpp-binding GTPase involved in cell partitioning, DNA repair and ribosome assembly K03979 obgE; GTPase [EC:3.6.5.-]
D AGREI_2847 DksA C4-type domain-containing protein K06204 dksA; RNA polymerase-binding transcription factor
D AGREI_1818 nusA; transcription translation coupling factor involved in Rho-dependent transcription termination K02600 nusA; transcription termination/antitermination protein NusA
D AGREI_1583 nusB; Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D AGREI_0581 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AGREI_2154 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D AGREI_1569 Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AGREI_1314 MTS domain-containing protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D AGREI_2787 Ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D AGREI_0958 putative Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D AGREI_1294 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D AGREI_3431 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AGREI_1431 rsmH; 16S rRNA m4C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AGREI_2157 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AGREI_1355 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D AGREI_2305 Uncharacterized tRNA/rRNA methyltransferase Mkms_4822 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D AGREI_1364 rluB; 23S rRNA pseudouridine 2633 (=2605 standard) pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D AGREI_1448 Pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AGREI_2390 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D AGREI_2289 Acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D AGREI_2233 Ribosomal-protein-S5p-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D AGREI_1076 Ribosomal-protein-L7p-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D AGREI_1096 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D AGREI_1235 Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D AGREI_1592 Putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D AGREI_1386 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AGREI_1913 Ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AGREI_1367 der; GTPase Der K03977 engA; GTPase
D AGREI_1315 hflX; GTPase HflX K03665 hflX; GTPase
D AGREI_1858 Putative threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AGREI_1603 rsh; GTP pyrophosphokinase (RelA/SpoT) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AGREI_1814 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D AGREI_1245 rsfS; ribosomal silencing factor K09710 ybeB; ribosome-associated protein
D AGREI_1297 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D AGREI_2063 engD; potassium-dependent informational ATPase interacting with 70S ribosome; ROS stress regulator K06942 ychF; ribosome-binding ATPase
D AGREI_1014 conserved protein of unknown function K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:agx03016]
D AGREI_0915 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AGREI_1819 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AGREI_1230 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AGREI_1280 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AGREI_2156 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AGREI_1869 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AGREI_2629 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AGREI_1941 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AGREI_1593 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AGREI_3407 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AGREI_2690 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AGREI_1614 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AGREI_0270 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AGREI_2306 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AGREI_1219 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AGREI_2117 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AGREI_1332 pheS; phenylalanyl-tRNA synthetase (alpha subunit) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AGREI_1333 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AGREI_1343 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AGREI_0771 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AGREI_3108 trpS; Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AGREI_1295 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AGREI_3357 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AGREI_1486 SAM-dependent methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D AGREI_2401 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D AGREI_1805 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D AGREI_1143 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AGREI_3141 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AGREI_1858 Putative threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AGREI_1312 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AGREI_3435 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D AGREI_MISCRNA1 RNaseP_bact_a K01978 rnpB; M1 RNA
D AGREI_1944 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D AGREI_1631 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D AGREI_1190 yjjK; fused putative transporter subunits of ABC superfamily: ATP-binding components K06020 ettA; energy-dependent translational throttle protein EttA
D AGREI_1756 Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D AGREI_2482 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D AGREI_0328 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D AGREI_1311 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D AGREI_1099 trmD; tRNA(m1G37)methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D AGREI_1327 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D AGREI_1149 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AGREI_2316 Folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D AGREI_2642 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D AGREI_2391 putative Inactive homolog of metal-dependent proteases, molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D AGREI_2389 tsaD; tRNA(NNU) t(6)A37 threonylcarbamoyladenosine modification; glycation binding protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D AGREI_2392 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D AGREI_0734 ThiF domain-containing protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D AGREI_1769 pnpA; polynucleotide phosphorylase (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:agx03012]
D AGREI_1815 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AGREI_1324 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AGREI_1124 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D AGREI_2444 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D AGREI_2446 fusA; elongation factor G K02355 fusA; elongation factor G
D AGREI_1861 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D AGREI_1127 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D AGREI_1860 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AGREI_2695 MTS domain-containing protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AGREI_2122 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D AGREI_2407 infA; initiation factor IF-I K02518 infA; translation initiation factor IF-1
D AGREI_1584 efp; elongation factor P K02356 efp; elongation factor P
D AGREI_1926 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D AGREI_0882 Peptide chain release factor 1 K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:agx03110]
D AGREI_2775 clpB; protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D AGREI_2619 clpC; class III stress response-related ATPase, AAA+ superfamily; Maxwell's demon K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D AGREI_1213 clpX; protein unfolding ATPase required for presentation of proteins to proteases; Maxwell's demon K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D AGREI_2736 Molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AGREI_2796 dnaK; molecular chaperone, ATP-dependent K04043 dnaK; molecular chaperone DnaK
D AGREI_2293 groEL; chaperonin large subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AGREI_1293 dnaJ; co-factor of molecular chaperone K03686 dnaJ; molecular chaperone DnaJ
D AGREI_2794 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AGREI_2795 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE
D AGREI_3065 18 kDa antigen 1 K13993 HSP20; HSP20 family protein
D AGREI_1406 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 hslR; ribosome-associated heat shock protein Hsp15
D AGREI_2385 groES; chaperonin small subunit K04078 groES; chaperonin GroES
D AGREI_2640 ftsH; ATP-dependent cytoplasmic membrane protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AGREI_1855 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AGREI_0307 conserved exported protein of unknown function K09796 pccA; periplasmic copper chaperone A
D AGREI_0011 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AGREI_1600 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D AGREI_3422 trxA; thioredoxin K03671 TXN; thioredoxin
D AGREI_1137 Putative thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:agx04131]
D AGREI_1233 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AGREI_2830 Flotillin K07192 FLOT; flotillin
D AGREI_1377 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D AGREI_1536 gapA; glyceraldehyde-3-phosphate dehydrogenase (NAD-dependent, glycolytic) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AGREI_2313 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AGREI_1554 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AGREI_2736 Molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AGREI_2798 MFS transporter, UMF1 family K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:agx03051]
D AGREI_2736 Molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AGREI_1484 Putative DeoR-family transcriptional regulator K13572 pafB; proteasome accessory factor B
D AGREI_1483 WYL domain-containing protein K13573 pafC; proteasome accessory factor C
C 03032 DNA replication proteins [BR:agx03032]
D AGREI_0371 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AGREI_2985 naeIM; Modification methylase NaeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AGREI_3142 Helicase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D AGREI_3145 hup; DNA-binding protein HU 1 K03530 hupB; DNA-binding protein HU-beta
D AGREI_0001 dnaA; chromosomal replication initiator informational ATPase K02313 dnaA; chromosomal replication initiator protein
D AGREI_3408 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AGREI_1752 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AGREI_1188 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_3411 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_P0053 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_1449 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AGREI_0002 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AGREI_1283 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AGREI_0752 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AGREI_1504 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AGREI_2064 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AGREI_0719 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AGREI_1104 Ribonuclease K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AGREI_1548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AGREI_1150 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AGREI_1643 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AGREI_0007 gyrA; DNA gyrase (subunit A) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AGREI_1645 gyrB; DNA gyrase (subunit B) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AGREI_0006 gyrB; DNA gyrase (subunit B) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AGREI_0750 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AGREI_2441 DNA topoisomerase IB (poxvirus type) K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:agx03036]
D AGREI_2985 naeIM; Modification methylase NaeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AGREI_1016 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AGREI_2830 Flotillin K07192 FLOT; flotillin
D AGREI_3145 hup; DNA-binding protein HU 1 K03530 hupB; DNA-binding protein HU-beta
D AGREI_0001 dnaA; chromosomal replication initiator informational ATPase K02313 dnaA; chromosomal replication initiator protein
D AGREI_1204 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D AGREI_1623 Starvation-inducible DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D AGREI_2696 Transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D AGREI_2844 HTH asnC-type domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AGREI_1082 smc; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D AGREI_1362 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D AGREI_1363 Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D AGREI_1925 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AGREI_1433 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AGREI_1303 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AGREI_1840 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AGREI_3389 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AGREI_1441 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D AGREI_1438 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AGREI_1924 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AGREI_1442 ftsZ; cell-division initiation protein K03531 ftsZ; cell division protein FtsZ
D AGREI_1626 Cell division protein ZapE K06916 zapE; cell division protein ZapE
D AGREI_1444 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D AGREI_1361 Chromosome partitioning protein K03496 parA; chromosome partitioning protein
D AGREI_1415 Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D AGREI_3051 Cellulose biosynthesis protein BcsQ K03496 parA; chromosome partitioning protein
D AGREI_3429 parA; chromosome partitioning protein; transcriptional regulator K03496 parA; chromosome partitioning protein
D AGREI_P0049 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D AGREI_1713 ParB family chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AGREI_3428 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AGREI_P0065 ParB domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AGREI_3431 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AGREI_1118 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D AGREI_1360 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D AGREI_1672 Phage_integrase domain-containing protein K04763 xerD; integrase/recombinase XerD
D AGREI_2024 mrp; Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AGREI_1538 whiA; putative cell division protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:agx03400]
D AGREI_1405 ogt; O-6-alkylguanine-DNA:cysteine-protein methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D AGREI_2920 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D AGREI_0310 phrA; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D AGREI_1891 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AGREI_1340 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D AGREI_1812 mutY; Adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AGREI_2288 Helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D AGREI_1410 NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AGREI_2615 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AGREI_0076 NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AGREI_1638 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AGREI_3053 phrB; (6-4) photolyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D AGREI_2921 Alkylated DNA repair protein AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D AGREI_0925 putative DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AGREI_1278 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AGREI_1845 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AGREI_1017 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AGREI_2220 Endonuclease VIII K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AGREI_1199 Formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D AGREI_2479 nei; putative endonuclease 8 2 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D AGREI_0772 Exodeoxyribonuclease-3 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AGREI_2753 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AGREI_1150 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AGREI_1548 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AGREI_1541 uvrA; excinuclease ABC (subunit A) K03701 uvrA; excinuclease ABC subunit A
D AGREI_3066 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D AGREI_1542 uvrB; excinuclease ABC (subunit B) K03702 uvrB; excinuclease ABC subunit B
D AGREI_1540 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D AGREI_2009 uvrD; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AGREI_2012 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AGREI_2367 uvrD; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AGREI_2463 rpoB; RNA polymerase (beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AGREI_2462 rpoC; RNA polymerase (beta' subunit) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AGREI_2403 rpoA; RNA polymerase (alpha subunit) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AGREI_1574 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AGREI_2120 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AGREI_2071 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AGREI_2072 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AGREI_1449 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AGREI_0002 dnaN; Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AGREI_1283 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AGREI_0752 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AGREI_1504 DNA polymerase-3 subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AGREI_2064 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AGREI_0719 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AGREI_1188 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_3411 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_P0053 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_2541 TrwC domain-containing protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AGREI_1309 recA; multifunctional SOS repair factor K03553 recA; recombination protein RecA
D AGREI_1608 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AGREI_1607 ruvB; Holliday junction DNA helicase, ATP-dependent component K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AGREI_1609 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AGREI_1571 priA; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AGREI_2882 Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D AGREI_2883 Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D AGREI_2605 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D AGREI_0004 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D AGREI_0959 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AGREI_1759 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AGREI_0720 recR; recA filament-DNA complex stabilisation factor K06187 recR; recombination protein RecR
D AGREI_1357 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D AGREI_0679 ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D AGREI_2200 ku; Non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku
D AGREI_2201 ligD; DNA repair polymerase / 3'-phosphoesterase / DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D AGREI_1643 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AGREI_0007 gyrA; DNA gyrase (subunit A) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AGREI_1645 gyrB; DNA gyrase (subunit B) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AGREI_0006 gyrB; DNA gyrase (subunit B) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AGREI_0750 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AGREI_2441 DNA topoisomerase IB (poxvirus type) K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AGREI_3145 hup; DNA-binding protein HU 1 K03530 hupB; DNA-binding protein HU-beta
D AGREI_2100 ATP-dependent DNA helicase, RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AGREI_2678 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AGREI_1166 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D AGREI_1316 lexA; transcriptional repressor of the SOS regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
D AGREI_2218 UmuC domain-containing protein K14161 imuB; protein ImuB
D AGREI_1258 putative DNA-directed DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D AGREI_2219 dnaE; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D AGREI_P0006 DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D AGREI_1310 recX; Regulatory protein RecX K03565 recX; regulatory protein
D AGREI_2478 lhr; putative ATP-dependent helicase lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D AGREI_2323 DNA mismatch repair protein MutT K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D AGREI_1359 ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D AGREI_0623 nrdE; ribonucleoside-diphosphate reductase (major subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AGREI_0624 nrdF; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:agx03029]
D AGREI_1815 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AGREI_1324 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AGREI_1124 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D AGREI_2444 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D AGREI_2446 fusA; elongation factor G K02355 fusA; elongation factor G
D AGREI_1299 era; maturation of 16S RNA and assembly of 30S ribosomal subunit GTPase K03595 era; GTPase
D AGREI_1343 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AGREI_1280 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AGREI_1941 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AGREI_2690 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AGREI_1869 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AGREI_1152 gatA; glutamyl-tRNA(Gln) amidotransferase (subunit A) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AGREI_1153 gatB; glutamyl-tRNA(Gln) amidotransferase (subunit B) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AGREI_1151 gatC; glutamyl-tRNA(Gln) amidotransferase (subunit C) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AGREI_1616 DNA/RNA endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D AGREI_3142 Helicase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D AGREI_1188 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_3411 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_P0053 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AGREI_2796 dnaK; molecular chaperone, ATP-dependent K04043 dnaK; molecular chaperone DnaK
D AGREI_2795 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE
D AGREI_2293 groEL; chaperonin large subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AGREI_2385 groES; chaperonin small subunit K04078 groES; chaperonin GroES
D AGREI_1293 dnaJ; co-factor of molecular chaperone K03686 dnaJ; molecular chaperone DnaJ
D AGREI_2794 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AGREI_1143 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AGREI_3141 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AGREI_2024 mrp; Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AGREI_1525 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AGREI_1524 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AGREI_1164 conserved membrane protein of unknown function K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AGREI_3433 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AGREI_2373 SURF1-like protein K14998 SURF1; surfeit locus 1 family protein
D AGREI_2736 Molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:agx02000]
D AGREI_2682 Multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D AGREI_2683 Fatty acid ABC transporter ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D AGREI_0612 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D AGREI_2353 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D AGREI_2354 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D AGREI_1275 ATP-binding cassette, subfamily C, CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AGREI_1274 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AGREI_2143 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D AGREI_1071 modA; Molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D AGREI_1072 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D AGREI_1073 ABC transporter domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AGREI_2091 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AGREI_2967 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AGREI_0113 Polyamine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AGREI_2089 Putative spermidine/putrescine transport system permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AGREI_2965 ABC transmembrane type-1 domain-containing protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AGREI_2966 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AGREI_0111 Polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AGREI_2090 Putative spermidine/putrescine transport system permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AGREI_2088 fbpC; Fe(3+) ions import ATP-binding protein FbpC K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AGREI_2964 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AGREI_0110 Putative spermidine/putrescine transport system ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AGREI_1392 protein of unknown function K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AGREI_1268 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) K05845 opuC; osmoprotectant transport system substrate-binding protein
D AGREI_0118 opuCC; Glycine betaine/carnitine/choline-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D AGREI_1266 Osmoprotectant transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D AGREI_1267 Glycine betaine ABC transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D AGREI_0115 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D AGREI_0117 Osmoprotectant transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D AGREI_1265 Osmoprotectant transport system ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AGREI_0116 opuCA; glycine betaine/carnitine/choline/choline ABC transporter (ATP-binding protein) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AGREI_1011 Pyrimidine ABC transporter, substrate-binding component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D AGREI_0038 NitT/TauT family transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D AGREI_1008 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AGREI_1010 Pyrimidine ABC transporter, transmembrane component 1 K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AGREI_1049 Nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AGREI_1009 Pyrimidine ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AGREI_1050 NitT/TauT family transport system ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AGREI_2303 msmX; multiple sugar (maltodextrins) transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_1981 Multiple sugar ABC transporter, substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AGREI_2003 Extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AGREI_0295 Carbohydrate ABC transporter substrate-binding protein, CUT1 family K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AGREI_0482 Sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AGREI_1982 Carbohydrate ABC transporter membrane protein 1, CUT1 family K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AGREI_2002 Sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AGREI_0296 Carbohydrate ABC transporter membrane protein 1, CUT1 family K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AGREI_0483 Carbohydrate ABC transporter membrane protein 1, CUT1 family K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AGREI_2001 Carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AGREI_0297 Carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AGREI_0484 Thiamine ABC transporter ATP-binding protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AGREI_1983 Carbohydrate ABC transporter membrane protein 2, CUT1 family K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AGREI_0608 Alpha-glucosides-binding periplasmic protein AglE precursor K10232 aglE; alpha-glucoside transport system substrate-binding protein
D AGREI_0610 Alpha-glucoside transport system permease protein K10233 aglF; alpha-glucoside transport system permease protein
D AGREI_0611 Alpha-glucoside transport system permease protein AglG K10234 aglG; alpha-glucoside transport system permease protein
D AGREI_0565 chvE; Multiple sugar-binding periplasmic receptor ChvE K10546 chvE; putative multiple sugar transport system substrate-binding protein
D AGREI_0661 chvE; Multiple sugar-binding periplasmic receptor ChvE K10546 chvE; putative multiple sugar transport system substrate-binding protein
D AGREI_0665 chvE; Multiple sugar-binding periplasmic receptor ChvE K10546 chvE; putative multiple sugar transport system substrate-binding protein
D AGREI_0567 Multiple monosaccharide ABC transporter membrane protein K10547 gguB; putative multiple sugar transport system permease protein
D AGREI_0660 Sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D AGREI_0667 xylH; Xylose transport system permease protein XylH K10547 gguB; putative multiple sugar transport system permease protein
D AGREI_0566 xylG; fused D-xylose transporter subunits of ABC superfamily: ATP-binding components K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_0568 putative enzyme K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_0659 xylG; fused D-xylose transporter subunits of ABC superfamily: ATP-binding components K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_0666 rbsA; ribose ABC transporter (ATP-binding protein) K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_3205 frcB; Fructose import binding protein FrcB K10552 frcB; fructose transport system substrate-binding protein
D AGREI_3204 rbsC; ribose ABC transporter (permease) K10553 frcC; fructose transport system permease protein
D AGREI_3203 frcA; Fructose import ATP-binding protein FrcA K10554 frcA; fructose transport system ATP-binding protein
D AGREI_0279 Allose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AGREI_2958 Ribose transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AGREI_0280 rbsC; ribose ABC transporter (permease) K10440 rbsC; ribose transport system permease protein
D AGREI_2956 rbsC; ribose ABC transporter (permease) K10440 rbsC; ribose transport system permease protein
D AGREI_0281 frcA; Fructose import ATP-binding protein FrcA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AGREI_2957 putative ribose/galactose/methyl galactoside import ATP-binding protein 1 K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AGREI_3368 fruE; Fructose import binding protein FruE K23508 ytfQ; galactofuranose transport system substrate-binding protein
D AGREI_3365 rbsC; ribose ABC transporter (permease) K23509 ytfT; galactofuranose transport system permease protein
D AGREI_3366 fruF; Fructose import permease protein FruF K23509 ytfT; galactofuranose transport system permease protein
D AGREI_3367 ytfR; putative sugar transporter subunit: ATP-binding component of ABC superfamily K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D AGREI_3369 ytfR; putative sugar transporter subunit: ATP-binding component of ABC superfamily K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D AGREI_0212 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AGREI_0210 SN-glycerol-3-phosphate transport system permease protein ugpA (TC 3.A.1.1.3) K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AGREI_0211 SN-glycerol-3-phosphate transport system permease protein ugpE (TC 3.A.1.1.3) K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AGREI_0780 Nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AGREI_0781 Nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AGREI_2153 Nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AGREI_0783 Nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein
D AGREI_2151 putative Glucose ABC transporter permease protein TsgB13 K23535 nupB; general nucleoside transport system permease protein
D AGREI_0784 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AGREI_2150 Nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D AGREI_0782 nupO; guanosine ABC transporter (ATP-binding protein) K23537 nupA; general nucleoside transport system ATP-binding protein
D AGREI_2152 yufO; Uncharacterized ABC transporter ATP-binding protein YufO K23537 nupA; general nucleoside transport system ATP-binding protein
D AGREI_0516 Sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AGREI_0673 Carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AGREI_1116 Sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AGREI_1374 Carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AGREI_2505 Extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AGREI_2821 Carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AGREI_2923 Carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AGREI_3280 conserved exported protein of unknown function K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AGREI_0059 Multiple sugar transport system substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AGREI_0472 Multiple sugar transport system substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AGREI_0674 Multiple sugar transport system permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D AGREI_1114 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D AGREI_1375 Carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein
D AGREI_2504 Carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein
D AGREI_2823 Sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D AGREI_2925 Carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 ABC.MS.P; multiple sugar transport system permease protein
D AGREI_3279 Binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D AGREI_0060 Multiple sugar transport system permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D AGREI_0473 Multiple sugar transport system permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D AGREI_0675 Multiple sugar transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AGREI_1115 Carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AGREI_2503 Carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AGREI_2822 Carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AGREI_2926 Carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AGREI_3278 Binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AGREI_0061 Carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AGREI_0474 Multiple sugar transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AGREI_2659 Monosaccharide ABC transporter substrate-binding protein, CUT2 family K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D AGREI_2661 Monosaccharide ABC transporter membrane protein, CUT2 family K02057 ABC.SS.P; simple sugar transport system permease protein
D AGREI_2660 Monosaccharide ABC transporter ATP-binding protein, CUT2 family K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AGREI_0361 Phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AGREI_2324 Phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AGREI_2325 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D AGREI_0359 Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D AGREI_2326 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D AGREI_0360 ABC transmembrane type-1 domain-containing protein K02038 pstA; phosphate transport system permease protein
D AGREI_2327 pstBA; phosphate ABC transporter (ATP-binding protein) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AGREI_0363 pstB; Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AGREI_2266 Phosphonate transport system substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AGREI_3297 Phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AGREI_2263 Phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D AGREI_2264 Phosphonate transport system permease protein K02042 phnE; phosphonate transport system permease protein
D AGREI_3299 Phosphate starvation-inducible protein PhoH K02042 phnE; phosphonate transport system permease protein
D AGREI_2265 phnC; phosphonate/organophosphate ester transporter subunit; ATP-binding component of ABC superfamily K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AGREI_3298 phnC; phosphonate/organophosphate ester transporter subunit; ATP-binding component of ABC superfamily K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AGREI_1329 gluB; Glutamate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D AGREI_2950 Glutamate transport system substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D AGREI_1330 glnM; glutamine ABC transporter (permease) K10006 gluC; glutamate transport system permease protein
D AGREI_2949 Amino acid ABC transporter membrane protein 1, PAAT family K10006 gluC; glutamate transport system permease protein
D AGREI_1331 Amino acid ABC transporter membrane protein 2, PAAT family K10007 gluD; glutamate transport system permease protein
D AGREI_2948 gluD; Glutamate transport system permease protein GluD K10007 gluD; glutamate transport system permease protein
D AGREI_1328 glnQ; glutamine ABC transporter (ATP-binding protein) K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D AGREI_2951 glnQ; glutamine ABC transporter (ATP-binding protein) K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D AGREI_2250 tcyA; cystine ABC transporter (substrate-binding lipoprotein) K02424 tcyA; L-cystine transport system substrate-binding protein
D AGREI_2249 tcyB; cystine ABC transporter (permease) K10009 tcyB; L-cystine transport system permease protein
D AGREI_2248 tcyC; cystine ABC transporter (ATP-binding protein) K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D AGREI_2383 Amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AGREI_2379 Amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D AGREI_2380 Amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D AGREI_2381 Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AGREI_2382 braG; High-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AGREI_0635 metQ; DL-methionine transporter subunit; periplasmic-binding component of ABC superfamily K02073 metQ; D-methionine transport system substrate-binding protein
D AGREI_0637 metP; methionine ABC transporter, permease component K02072 metI; D-methionine transport system permease protein
D AGREI_0636 metN; methionine ABC transporter (ATP-binding protein) K02071 metN; D-methionine transport system ATP-binding protein
D AGREI_0641 Periplasmic binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AGREI_0950 Amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AGREI_3101 hisJ; Putative histidine-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AGREI_0639 Polar amino acid transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D AGREI_3100 artQ; Arginine transport system permease protein ArtQ K02029 ABC.PA.P; polar amino acid transport system permease protein
D AGREI_0640 artR; high affinity arginine ABC transporter (ATP-binding protein) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AGREI_3099 glnQ; Glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AGREI_2050 Oligopeptide transport system substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AGREI_2049 Oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D AGREI_2048 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D AGREI_2047 gsiA; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D AGREI_1223 Peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AGREI_1751 Peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AGREI_2194 Peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AGREI_2842 Peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AGREI_1224 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AGREI_1750 Peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AGREI_2193 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AGREI_2841 ddpB; D-ala-D-ala transporter subunit; membrane component of ABC superfamily K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AGREI_1225 Peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AGREI_1749 Peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AGREI_2192 Peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AGREI_2840 appC; oligopeptide ABC transporter (permease) K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AGREI_1226 yliA; putative peptide transport fused subunits of ABC superfamily: ATP-binding components K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AGREI_1748 gsiA; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AGREI_2191 Glutathione ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AGREI_2839 dppD; dipeptide ABC transporter (ATP-binding subunit) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AGREI_2838 oppF; oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AGREI_2710 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT K25132 hmuT; heme transport system substrate-binding protein
D AGREI_2711 Heme ABC transporter, permease protein HmuU K25133 hmuU; heme transport system permease protein
D AGREI_2712 hmuV; Hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D AGREI_0396 exported protein of unknown function K25286 fagD; iron-siderophore transport system substrate-binding protein
D AGREI_0323 Iron complex transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D AGREI_2256 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D AGREI_3339 Iron complex transport system substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D AGREI_0322 fepD; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23186 fepD; iron-siderophore transport system permease protein
D AGREI_0393 fepD; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23186 fepD; iron-siderophore transport system permease protein
D AGREI_2257 fepD; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23186 fepD; iron-siderophore transport system permease protein
D AGREI_3340 fepD; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23186 fepD; iron-siderophore transport system permease protein
D AGREI_0321 fepG; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23187 fepG; iron-siderophore transport system permease protein
D AGREI_0394 Iron complex transport system permease protein K23187 fepG; iron-siderophore transport system permease protein
D AGREI_2258 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D AGREI_3341 fepG; iron-enterobactin transporter subunit; membrane component of ABC superfamily K23187 fepG; iron-siderophore transport system permease protein
D AGREI_0395 feuV; iron(III)-siderophore transporter (ATP binding component) K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D AGREI_2259 feuV; iron(III)-siderophore transporter (ATP binding component) K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D AGREI_2906 Iron complex transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AGREI_3415 Fe/B12 periplasmic-binding domain-containing protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AGREI_2908 Iron complex transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D AGREI_3417 Iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D AGREI_1506 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AGREI_2907 fecE; iron-dicitrate transporter subunit; ATP-binding component of ABC superfamily; KpLE2 phage-like element K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AGREI_3414 ABC transporter domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AGREI_1516 bioY; biotin transporter K03523 bioY; biotin transport system substrate-specific component
D AGREI_1512 Cobalt ABC transporter permease K16783 bioN; biotin transport system permease protein
D AGREI_1513 Biotin transport system ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D AGREI_1174 Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine K16785 ecfT; energy-coupling factor transport system permease protein
D AGREI_1173 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AGREI_1172 Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine K16925 ykoE; energy-coupling factor transport system permease protein
D AGREI_3154 ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D AGREI_3152 ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D AGREI_3153 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D AGREI_3344 Putative ABC transport system permease protein K09813 hrtB; hemin transport system permease protein
D AGREI_3345 Putative ABC transport system ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D AGREI_1924 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AGREI_1925 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AGREI_0832 Transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_1369 putative ABC transporter integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_1948 conserved membrane protein of unknown function K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_1951 Transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_2146 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_2673 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_3185 Transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_3401 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_0099 conserved membrane protein of unknown function K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_0184 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_0452 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_3250 membrane protein of unknown function K01992 ABC-2.P; ABC-2 type transport system permease protein
D AGREI_1949 putative enzyme K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_0833 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_1370 bcrA; Bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_1952 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_2147 Multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_2674 Multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_2981 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_3186 Multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_3249 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_3402 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_0100 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_0185 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_0451 ABC transporter domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AGREI_0596 FtsX domain-containing protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AGREI_1936 Putative ABC transport system permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AGREI_0595 Peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AGREI_1937 skiY; subunit of efflux permease exporting the starvation-induced killing protein (ATP-binding protein) K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AGREI_1520 sufC; sulfur mobilizing ABC protein, ATPase K09013 sufC; Fe-S cluster assembly ATP-binding protein
D AGREI_0056 Putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D AGREI_1120 gtr; Glucose transport protein K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D AGREI_0136 iolT; Major myo-inositol transporter IolT K06609 iolT; MFS transporter, SP family, major inositol transporter
D AGREI_0692 ABC transporter permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D AGREI_0988 CP family cyanate transporter-like MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D AGREI_1955 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D AGREI_0670 Bcr/CflA family efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AGREI_2300 MFS transporter, DHA1 family, inner membrane transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D AGREI_0908 lfrA; Multidrug efflux pump LfrA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D AGREI_0235 ycnB; Uncharacterized MFS-type transporter YcnB K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D AGREI_2766 copO; metal (copper) efflux transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D AGREI_2798 MFS transporter, UMF1 family K06902 UMF1; MFS transporter, UMF1 family
D AGREI_2518 Sugar phosphate permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D AGREI_0039 Niacin transporter NiaP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D AGREI_2412 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AGREI_2413 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AGREI_2862 PTS system, fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AGREI_2414 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AGREI_0793 PTS system, mannitol-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AGREI_0794 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AGREI_1471 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase; DHA-specific IIA component / DHA-specific phosphocarrier protein HPr K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D AGREI_1468 glpF; glycerol permease K02440 glpF; glycerol uptake facilitator
D AGREI_1991 glpF; glycerol permease K02440 glpF; glycerol uptake facilitator
D AGREI_2061 putative Potassium voltage-gated channel subfamily KQT; potassium channel, VIC family K10716 kch; voltage-gated potassium channel
D AGREI_1625 amt; putative ammonia channel K03320 amt; ammonium transporter, Amt family
D AGREI_1822 VWFA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D AGREI_1823 VWFA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D AGREI_2238 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D AGREI_1196 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D AGREI_0955 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D AGREI_1790 Magnesium transporter K03284 corA; magnesium transporter
D AGREI_2098 crcB; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D AGREI_2099 crcB; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D AGREI_P0080 crcB; Putative fluoride ion transporter CrcB 1 K06199 crcB; fluoride exporter
D AGREI_P0081 crcB; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D AGREI_0705 conserved membrane protein of unknown function K24915 TMEM175; TMEM175 potassium channel family protein
D AGREI_1906 conserved membrane protein of unknown function K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AGREI_1298 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AGREI_1907 Hemolysin, contains CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AGREI_2709 conserved exported protein of unknown function K21449 ata; trimeric autotransporter adhesin
D AGREI_2774 ansP; L-asparagine transporter K11738 ansP; L-asparagine permease
D AGREI_0886 Amino acid ABC transporter permease K16238 eat; ethanolamine permease
D AGREI_1942 czcD; Metal cation efflux system protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D AGREI_2591 putative Cation efflux system protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D AGREI_2931 Small multidrug resistance pump K03297 emrE; small multidrug resistance pump
D AGREI_2932 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump
D AGREI_2164 gdx; Guanidinium exporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D AGREI_2125 eamA; putative amino-acid metabolite efflux pump K15268 eamA; O-acetylserine/cysteine efflux transporter
D AGREI_2029 Permease of the drug/metabolite transporter (DMT) superfamily K15269 pecM; probable blue pigment (indigoidine) exporter
D AGREI_3377 Multidrug transporter K03298 TC.DME; drug/metabolite transporter, DME family
D AGREI_2492 EamA domain-containing protein K11939 rhtA; inner membrane transporter RhtA
D AGREI_2384 rarD; Protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D AGREI_0126 Choline/glycine/proline betaine transport protein K02168 betT; choline/glycine/proline betaine transport protein
D AGREI_0600 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D AGREI_2837 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D AGREI_0919 nhaA; Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D AGREI_2768 Sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D AGREI_3061 Cation:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D AGREI_0155 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D AGREI_2375 Potassium/proton antiporter regulatory subunit, CPA2 family K07228 khtT; K+:H+ antiporter subunit KhtT
D AGREI_2374 Potassium/proton antiporter membrane subunit, CPA2 family K26732 khtU; K+:H+ antiporter subunit KhtU
D AGREI_0334 Potassium uptake protein, integral membrane component, KtrB K03498 trkH; trk/ktr system potassium uptake protein
D AGREI_0333 Potassium uptake protein, integral membrane component, KtrA K03499 trkA; trk/ktr system potassium uptake protein
D AGREI_1214 Benzoate transport protein K05782 benE; benzoate membrane transport protein
D AGREI_3097 ybaR; Putative sulfate transporter YbaR K03321 TC.SULP; sulfate permease, SulP family
D AGREI_0195 ybaR; putative permease K03321 TC.SULP; sulfate permease, SulP family
D AGREI_2746 mntH; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D AGREI_0032 Arsenic transporter K03893 arsB; arsenical pump membrane protein
D AGREI_2807 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D AGREI_2808 Multisubunit sodium/proton antiporter, MrpC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D AGREI_2809 Cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D AGREI_2810 Cation:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D AGREI_2811 Multisubunit sodium/proton antiporter, MrpF subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D AGREI_2812 Na(+) H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D AGREI_3420 Proposed peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AGREI_2754 conserved membrane protein of unknown function K13936 mdcF; malonate transporter and related proteins
D AGREI_2697 L-lysine exporter family protein LysE/ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D AGREI_1746 Branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D AGREI_1745 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump
D AGREI_0693 Predicted PurR-regulated permease PerM K20469 K20469; putative heme transporter
D AGREI_2087 AI-2E family transporter K20469 K20469; putative heme transporter
D AGREI_2486 Rubrerythrin family protein K22736 VIT; vacuolar iron transporter family protein
D AGREI_1438 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AGREI_2043 Ferrous iron transport permease EfeU, N-terminal extended K07243 FTR; high-affinity iron transporter
D AGREI_2044 Ferrous iron transport periplasmic protein EfeO K07224 efeO; iron uptake system component EfeO
D AGREI_2045 Deferrochelatase/peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D AGREI_0601 Biopolymer transporter Tol K03641 tolB; TolB protein
D AGREI_2592 Cytochrome c-type biogenesis protein CcdA (DsbD analog) K06196 ccdA; cytochrome c-type biogenesis protein
D AGREI_0348 Cytochrome c-type biogenesis protein CcdA (DsbD analog) K06196 ccdA; cytochrome c-type biogenesis protein
D AGREI_0537 Capsular exopolysaccharide family K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D AGREI_2618 Riboflavin transporter PnuX K03811 pnuC; nicotinamide mononucleotide transporter
D AGREI_1037 pucM; 5-hydroxyisourate hydrolase; also uricase subunit K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D AGREI_0215 Membrane protein K00389 yidH; inner membrane protein YidH
D AGREI_2058 CopC domain-containing protein K07156 copC; copper resistance protein C
D AGREI_2585 CopC domain-containing protein K07156 copC; copper resistance protein C
D AGREI_0306 CopC domain-containing protein K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:agx02044]
D AGREI_2076 membrane protein of unknown function K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AGREI_0743 Type II/type IV pathway secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AGREI_1935 Pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AGREI_0744 T2SSF domain-containing protein K12510 tadB; tight adherence protein B
D AGREI_1934 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D AGREI_1933 Pilus assembly protein K12511 tadC; tight adherence protein C
D AGREI_1445 conserved protein of unknown function K02221 yggT; YggT family protein
D AGREI_1281 Competence protein ComEA K02237 comEA; competence protein ComEA
D AGREI_1282 Lactamase_B domain-containing protein K02238 comEC; competence protein ComEC
D AGREI_0870 secA; translocase binding subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AGREI_1605 secD; Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AGREI_0580 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AGREI_1604 secF; Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AGREI_1533 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D AGREI_2418 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D AGREI_1089 ffh; signal recognition particle-like (SRP) GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AGREI_1085 ftsY; signal recognition particle (docking protein) K03110 ftsY; fused signal recognition particle receptor
D AGREI_1606 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D AGREI_1164 conserved membrane protein of unknown function K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AGREI_3433 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AGREI_1481 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D AGREI_3030 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D AGREI_2032 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D AGREI_3032 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D AGREI_1480 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D AGREI_3031 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:agx02042]
D AGREI_1906 conserved membrane protein of unknown function K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AGREI_1298 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AGREI_1907 Hemolysin, contains CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AGREI_2080 Hemolysin III K11068 hlyIII; hemolysin III
D AGREI_3006 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:agx02022]
D AGREI_2738 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AGREI_2311 senX; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D AGREI_2310 regX; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D AGREI_3115 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AGREI_3116 kdpE; DNA-binding response regulator in two-component regulatory system with KdpD K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AGREI_3028 Histidine kinase domain-containing protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AGREI_0866 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D AGREI_0865 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D AGREI_3191 Histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D AGREI_3192 cutR; Transcriptional regulatory protein CutR K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D AGREI_0599 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AGREI_2291 Two-component system, OmpR family, sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AGREI_0405 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AGREI_0598 ykoG; two-component response regulator [YkoH] K02483 K02483; two-component system, OmpR family, response regulator
D AGREI_2290 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D AGREI_2743 Transcriptional regulatory protein, C terminal K02483 K02483; two-component system, OmpR family, response regulator
D AGREI_0406 mprA; Response regulator MprA K02483 K02483; two-component system, OmpR family, response regulator
D AGREI_1260 Sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AGREI_3184 Two-component system, NarL family, sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AGREI_0183 Two-component system sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AGREI_1261 desR; Transcriptional regulatory protein DesR K07693 desR; two-component system, NarL family, response regulator DesR
D AGREI_3183 yvfU; two-component response regulator [YvfT] K07693 desR; two-component system, NarL family, response regulator DesR
D AGREI_0182 desR; Transcriptional regulatory protein DesR K07693 desR; two-component system, NarL family, response regulator DesR
D AGREI_2836 Sensor histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D AGREI_2972 Signal transduction histidine kinase CitA regulating citrate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D AGREI_P0059 conserved protein of unknown function K15012 regA; two-component system, response regulator RegA
D AGREI_0876 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D AGREI_1551 pdtaR; putative transcriptional regulatory protein pdtaR K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:agx02035]
D AGREI_P0066 protein of unknown function K02388 flgC; flagellar basal-body rod protein FlgC
D AGREI_2250 tcyA; cystine ABC transporter (substrate-binding lipoprotein) K02424 tcyA; L-cystine transport system substrate-binding protein
D AGREI_2076 membrane protein of unknown function K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AGREI_0743 Type II/type IV pathway secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AGREI_1935 Pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:agx04812]
D AGREI_1442 ftsZ; cell-division initiation protein K03531 ftsZ; cell division protein FtsZ
D AGREI_1361 Chromosome partitioning protein K03496 parA; chromosome partitioning protein
D AGREI_1415 Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D AGREI_3051 Cellulose biosynthesis protein BcsQ K03496 parA; chromosome partitioning protein
D AGREI_3429 parA; chromosome partitioning protein; transcriptional regulator K03496 parA; chromosome partitioning protein
D AGREI_P0049 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D AGREI_1713 ParB family chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AGREI_3428 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AGREI_P0065 ParB domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:agx04147]
D AGREI_2736 Molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AGREI_2114 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_P0082 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AGREI_1536 gapA; glyceraldehyde-3-phosphate dehydrogenase (NAD-dependent, glycolytic) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AGREI_1535 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AGREI_1554 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AGREI_0011 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AGREI_2830 Flotillin K07192 FLOT; flotillin
D AGREI_2293 groEL; chaperonin large subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AGREI_2796 dnaK; molecular chaperone, ATP-dependent K04043 dnaK; molecular chaperone DnaK
D AGREI_3096 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AGREI_2377 Uncharacterized oxidoreductase MSMEG_1603/MSMEI_1564 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AGREI_2378 guaB; inosine-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AGREI_2444 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D AGREI_1295 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AGREI_3357 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AGREI_1157 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1421 fadD; Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1515 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2206 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_2715 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AGREI_1514 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AGREI_0855 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AGREI_3107 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AGREI_2417 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AGREI_2145 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AGREI_1339 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AGREI_2142 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AGREI_2356 Dimethylargininase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D AGREI_1006 hyuA; D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AGREI_2174 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AGREI_1138 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D AGREI_1467 glpK; glycerol kinase (sn-glycerol-3-phosphate generating) K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AGREI_1990 glpK; glycerol kinase (sn-glycerol-3-phosphate generating) K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AGREI_0888 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1658 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_1661 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AGREI_0090 hemB; delta-aminolevulinic acid dehydratase (porphobilinogen synthase) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AGREI_1956 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AGREI_0905 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AGREI_2357 purH; fused phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AGREI_1653 lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_2103 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AGREI_0884 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AGREI_1529 zwf; Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AGREI_1534 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AGREI_2313 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:agx02048]
D AGREI_P0018 xamIM; Modification methylase XamI K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D AGREI_0256 Methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D AGREI_2985 naeIM; Modification methylase NaeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AGREI_3246 conserved protein of unknown function K07448 mrr; restriction system protein
D AGREI_1442 ftsZ; cell-division initiation protein K03531 ftsZ; cell division protein FtsZ
D AGREI_0915 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AGREI_1143 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AGREI_3141 iscS; Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors [BR:agx04030]
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:agx01504]
D AGREI_1209 Aminoglycoside phosphotransferase K00897 aphA; kanamycin kinase [EC:2.7.1.95]
D AGREI_1867 Virginiamycin B lyase K18235 vgb; virginiamycin B lyase [EC:4.2.99.-]
D AGREI_2011 APH domain-containing protein K06979 mph; macrolide phosphotransferase
D AGREI_0908 lfrA; Multidrug efflux pump LfrA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D AGREI_1270 Peptidase family M48 K02172 blaR1; bla regulator protein blaR1
D AGREI_1271 blaI; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D AGREI_2918 penP; beta-lactamase precursor (putative hydrolase) K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AGREI_0065 Serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AGREI_0747 Helicase/secretion neighborhood TadE-like protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_2525 protein of unknown function K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_0263 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AGREI_3191 Histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D AGREI_3192 cutR; Transcriptional regulatory protein CutR K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D AGREI_1144 Endo/exonuclease/phosphatase domain-containing protein K18353 vanJ; vancomycin resistance protein VanJ
D AGREI_0514 conserved membrane protein of unknown function K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D AGREI_0194 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:agx00537]
D AGREI_1956 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:agx03100]
D AGREI_TRNA2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AGREI_TRNA33 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AGREI_TRNA18 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AGREI_TRNA6 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AGREI_TRNA16 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AGREI_TRNA23 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AGREI_TRNA32 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AGREI_TRNA37 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AGREI_TRNA27 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AGREI_TRNA41 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AGREI_TRNA14 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AGREI_TRNA34 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AGREI_TRNA15 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AGREI_TRNA26 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AGREI_TRNA43 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AGREI_TRNA29 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AGREI_TRNA40 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AGREI_TRNA44 tRNA-His K14226 tRNA-His; tRNA His
D AGREI_TRNA1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AGREI_TRNA3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AGREI_TRNA20 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AGREI_TRNA21 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AGREI_TRNA35 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AGREI_TRNA24 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AGREI_TRNA25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AGREI_TRNA13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AGREI_TRNA36 tRNA-Met K14230 tRNA-Met; tRNA Met
D AGREI_TRNA38 tRNA-Met K14230 tRNA-Met; tRNA Met
D AGREI_TRNA9 tRNA-Met K14230 tRNA-Met; tRNA Met
D AGREI_TRNA28 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AGREI_TRNA17 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AGREI_TRNA45 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AGREI_TRNA19 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AGREI_TRNA4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AGREI_TRNA5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AGREI_TRNA11 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AGREI_TRNA30 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AGREI_TRNA12 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AGREI_TRNA31 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AGREI_TRNA8 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AGREI_TRNA10 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AGREI_TRNA7 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AGREI_TRNA42 tRNA-Val K14237 tRNA-Val; tRNA Val
D AGREI_TRNA22 tRNA-Val K14237 tRNA-Val; tRNA Val
D AGREI_TRNA39 tRNA-Val K14237 tRNA-Val; tRNA Val
D AGREI_RRNA1 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AGREI_RRNA6 ribosomal RNA 16s ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AGREI_RRNA5 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AGREI_RRNA2 ribosomal RNA 23s ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AGREI_RRNA4 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AGREI_RRNA3 ribosomal RNA 5s ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AGREI_MISCRNA4 Bacteria_small_SRP K01983 ffs; SRP RNA
D AGREI_MISCRNA1 RNaseP_bact_a K01978 rnpB; M1 RNA
D AGREI_TMRNA1 tmRNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D AGREI_1785 pgoN; promiscuous glyoxal/methylglyoxal reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D AGREI_2176 pgoN; promiscuous glyoxal/methylglyoxal reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D AGREI_2196 pgoN; promiscuous glyoxal/methylglyoxal reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D AGREI_0632 oleD; 2-alkyl-3-oxoalkanoate reductase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D AGREI_1187 yghZ; aldo-keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D AGREI_0996 LLM class F420-dependent oxidoreductase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D AGREI_2489 Deazaflavin-dependent oxidoreductase, nitroreductase family K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D AGREI_3251 yajO; aldoketo-oxidoreductase, NADP-binding K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D AGREI_1033 NADP oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D AGREI_2858 Diguanylate cyclase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D AGREI_2979 NADP oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D AGREI_3052 F420_oxidored domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D AGREI_3098 putative Renalase K18208 RNLS; renalase [EC:1.6.3.5]
D AGREI_0797 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AGREI_2944 NADPH2:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AGREI_0193 Zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AGREI_0704 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AGREI_0703 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D AGREI_2298 msrB; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D AGREI_1791 Putative glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D AGREI_3273 cpo; Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D AGREI_0879 bcp; thiol peroxidase, thioredoxin-dependent K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AGREI_2052 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AGREI_2727 ohrB; organic hydroperoxide resistance reductase B K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AGREI_0374 ohrB; organic hydroperoxide resistance reductase B K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AGREI_1728 ahpE; Alkyl hydroperoxide reductase E K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D AGREI_2622 conserved protein of unknown function K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AGREI_2178 Dibenzothiophene desulfurization enzyme K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-]
D AGREI_0391 Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D AGREI_2130 Mycoredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D AGREI_2562 Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AGREI_3074 Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AGREI_P0073 Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AGREI_2168 Oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D AGREI_0527 Acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D AGREI_2321 mshD; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D AGREI_1478 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D AGREI_2589 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D AGREI_0437 A-factor biosynthesis protein AfsA K22463 afsA; 2-oxo-3-(phosphooxy)propyl 3-oxoalkanoate synthase [EC:2.3.1.277]
D AGREI_0081 Acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D AGREI_0630 oleA; Acyl-CoA:acyl-CoA alkyltransferase K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D AGREI_1919 D-inositol-3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D AGREI_1557 lgt; Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AGREI_2567 lgt; Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AGREI_1183 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D AGREI_1660 glnE; Glutamine synthetase adenylyl-L-tyrosine phosphorylase / Glutamine synthetase adenylyl transferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D AGREI_2649 Reverse transcriptase domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AGREI_2031 Phosphotriesterase-related protein K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D AGREI_2606 Carboxylic ester hydrolase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D AGREI_1191 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AGREI_2603 Protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D AGREI_3083 Protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D AGREI_2019 Metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D AGREI_2155 tatD; Uncharacterized metal-dependent hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AGREI_P0061 Nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D AGREI_0044 nucS; Endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D AGREI_2507 Arabinogalactan endo-beta-1,4-galactanase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D AGREI_1417 def; Peptide deformylase 2 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AGREI_1744 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AGREI_2852 laaA; L-amino acid amidase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]
D AGREI_1920 N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D AGREI_2517 pgdA; Peptidoglycan deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D AGREI_2082 mca; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D AGREI_1978 Hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D AGREI_1063 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D AGREI_0861 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AGREI_1740 yeaC; putative MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AGREI_1826 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AGREI_2454 yeaC; putative MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AGREI_3397 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AGREI_0414 Predicted metal-dependent hydrolase, TIM-barrel fold K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D AGREI_0631 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K25044 oleBC; cis-3-alkyl-4-acyloxetan-2-one decarboxylase / olefin beta-lactone synthetase [EC:4.1.1.114 6.1.3.1]
D AGREI_1904 nnrD; ADP-dependent (S)-NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D AGREI_0282 D-psicose/D-tagatose/L-ribulose 3-epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D AGREI_0283 L-ribulose 3-epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D AGREI_1489 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D AGREI_2893 copB; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D AGREI_2941 ctpE; Calcium-transporting ATPase CtpE K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
D AGREI_2575 Lead, cadmium, zinc and mercury transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D AGREI_0146 iolH; putative sugar-phosphate epimerase/isomerase K06605 iolH; myo-inositol catabolism protein IolH
D AGREI_0485 Beta-glucosidase K17641 bxlA; beta-xylosidase
C 99982 Energy metabolism
D AGREI_2904 fdhD; Sulfur carrier protein FdhD K02379 fdhD; FdhD protein
D AGREI_2718 Iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D AGREI_0622 nrdI; protein that stimulates ribonucleotide reduction K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D AGREI_2337 putative Sulfate transporter CysZ K06203 cysZ; CysZ protein
D AGREI_2613 Glyoxalase K08234 yaeR; glyoxylase I family protein
D AGREI_1443 Pyridoxal phosphate homeostasis protein K06997 yggS; PLP dependent protein
D AGREI_2728 Protein N-acetyltransferase, RimJ/RimL family K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D AGREI_0842 O-antigen ligase K16567 exoQ; exopolysaccharide production protein ExoQ
D AGREI_0843 O-antigen ligase K16567 exoQ; exopolysaccharide production protein ExoQ
D AGREI_2969 G5 domain-containing protein K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
D AGREI_2897 Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
D AGREI_2481 Abhydrolase_2 domain-containing protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D AGREI_1492 cspC; cold-shock protein K03704 cspA; cold shock protein
D AGREI_2285 Cold shock protein CspC K03704 cspA; cold shock protein
D AGREI_2294 cspD; cold-shock protein, molecular chaperone, RNA-helicase co-factor K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D AGREI_1995 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D AGREI_1206 tig; Trigger factor K03545 tig; trigger factor
D AGREI_1923 smpB; tmRNA-binding protein K03664 smpB; SsrA-binding protein
D AGREI_0621 nrdH; glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH
D AGREI_P0051 Glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D AGREI_P0057 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH
D AGREI_1109 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein K07391 comM; magnesium chelatase family protein
D AGREI_0349 putative Ccs1/ResB-related cytochrome C-type biogenesis protein K07399 resB; cytochrome c biogenesis protein
D AGREI_1062 XshC-Cox1-family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D AGREI_2066 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D AGREI_1108 conserved protein of unknown function K07460 yraN; putative endonuclease
D AGREI_1110 DNA-binding protein K04096 smf; DNA processing protein
D AGREI_1598 Putative ATPase K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D AGREI_1879 Phage shock protein A (PspA) family protein K03969 pspA; phage shock protein A
D AGREI_2975 HSDR_N_2 domain-containing protein K07504 K07504; predicted type IV restriction endonuclease
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D AGREI_1383 APA family basic amino acid/polyamine antiporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D AGREI_2971 citN; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D AGREI_0161 pit; putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D AGREI_3432 DNA-binding protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D AGREI_2046 typA; GTP-binding protein TypA/BipA homolog K06207 typA; GTP-binding protein
D AGREI_1296 phoH; phosphate starvation-induced protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D AGREI_2077 PhoH family protein K07175 phoH2; PhoH-like ATPase
D AGREI_1080 Circadian clock protein KaiB K08481 kaiB; circadian clock protein KaiB
D AGREI_1081 Circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
D AGREI_0399 putative RNA or cyclic d-GMP binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
C 99994 Others
D AGREI_2312 phoU; Phosphate-specific transport system accessory protein PhoU homolog 2 K02039 phoU; phosphate transport system protein
D AGREI_3325 phnK; carbon-phosphorus lyase complex subunit K05781 phnK; putative phosphonate transport system ATP-binding protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D AGREI_2297 Acyltransferase K02348 elaA; ElaA protein
D AGREI_2528 protein of unknown function K04065 osmY; hyperosmotically inducible periplasmic protein
D AGREI_1195 glbO; Group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin
D AGREI_0758 SSD domain-containing protein K06994 K06994; putative drug exporter of the RND superfamily
D AGREI_2106 RND transporter K06994 K06994; putative drug exporter of the RND superfamily
D AGREI_2180 PNPLA domain-containing protein K07001 K07001; NTE family protein
D AGREI_0201 putative Inorganic diphosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D AGREI_1523 sufB; FeS cluster formation scaffold protein K09014 sufB; Fe-S cluster assembly protein SufB
D AGREI_1522 Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D AGREI_0773 Ribonuclease K07058 K07058; membrane protein
D AGREI_1628 Sulfur acceptor protein SufE for iron-sulfur cluster assembly K02426 sufE; cysteine desulfuration protein SufE
D AGREI_0105 conserved protein of unknown function K07146 K07146; UPF0176 protein
D AGREI_0922 PhnB protein K04750 phnB; PhnB protein
D AGREI_3212 PhnB protein K04750 phnB; PhnB protein
D AGREI_0570 putative Uncharacterized phosphatase PhoE K15640 K15640; uncharacterized phosphatase
D AGREI_2586 conserved membrane protein of unknown function K02351 K02351; putative membrane protein
D AGREI_0226 Cytochrome c oxidase assembly factor CtaG K02351 K02351; putative membrane protein
D AGREI_2094 lemA; Protein LemA K03744 lemA; LemA protein
D AGREI_1269 conserved membrane protein of unknown function K03975 dedA; membrane-associated protein
D AGREI_1940 Membrane-associated protein K03975 dedA; membrane-associated protein
D AGREI_2734 conserved membrane protein of unknown function K01421 yhgE; putative membrane protein
D AGREI_3376 membrane protein of unknown function K08972 K08972; putative membrane protein
D AGREI_2634 Putative membrane protein K08981 K08981; putative membrane protein
D AGREI_2871 conserved membrane protein of unknown function K08987 K08987; putative membrane protein
D AGREI_0159 protein of unknown function K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D AGREI_2175 Thymidylate kinase K06888 K06888; uncharacterized protein
D AGREI_1629 Hydrolase_4 domain-containing protein K06889 K06889; uncharacterized protein
D AGREI_1095 KH domain RNA binding protein YlqC K06960 K06960; uncharacterized protein
D AGREI_0255 Acetyltransferase K06975 K06975; uncharacterized protein
D AGREI_1156 Acetyltransferase K06977 K06977; uncharacterized protein
D AGREI_2911 PepX_C domain-containing protein K06978 K06978; uncharacterized protein
D AGREI_0071 Putative_PNPOx domain-containing protein K07006 K07006; uncharacterized protein
D AGREI_1133 conserved protein of unknown function K07018 K07018; uncharacterized protein
D AGREI_0383 conserved protein of unknown function K07032 K07032; uncharacterized protein
D AGREI_2656 Neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D AGREI_1763 Cell division inhibitor K07071 K07071; uncharacterized protein
D AGREI_1794 Cell division inhibitor K07071 K07071; uncharacterized protein
D AGREI_0151 Cell division inhibitor K07071 K07071; uncharacterized protein
D AGREI_3354 conserved membrane protein of unknown function K07089 K07089; uncharacterized protein
D AGREI_3358 conserved membrane protein of unknown function K07089 K07089; uncharacterized protein
D AGREI_P0077 putative membrane transporter protein K07090 K07090; uncharacterized protein
D AGREI_1957 Phosphoesterase K07095 K07095; uncharacterized protein
D AGREI_0738 Metallophosphatase K07098 K07098; uncharacterized protein
D AGREI_1893 Xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D AGREI_2495 putative 17-beta-estradiol 17-dehydrogenase K07124 K07124; uncharacterized protein
D AGREI_3400 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D AGREI_2895 Peptidase S16 K07157 K07157; uncharacterized protein
D AGREI_1666 conserved protein of unknown function K07164 K07164; uncharacterized protein
D AGREI_3434 Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D AGREI_2112 conserved protein of unknown function K09009 K09009; uncharacterized protein
D AGREI_2005 conserved membrane protein of unknown function K09118 K09118; uncharacterized protein
D AGREI_0645 conserved protein of unknown function K09164 K09164; uncharacterized protein
D AGREI_0901 conserved protein of unknown function K09164 K09164; uncharacterized protein
D AGREI_2474 conserved protein of unknown function K09164 K09164; uncharacterized protein
D AGREI_1624 conserved protein of unknown function K09166 K09166; uncharacterized protein
D AGREI_2635 transmembrane protein, distant homology with ydbS K09167 K09167; uncharacterized protein
D AGREI_3105 Cupin domain-containing protein K09705 K09705; uncharacterized protein
D AGREI_0217 putative Inner membrane protein YedI K09781 K09781; uncharacterized protein
D AGREI_1921 conserved protein of unknown function K09807 K09807; uncharacterized protein
D AGREI_1847 conserved protein of unknown function K09861 K09861; uncharacterized protein
D AGREI_2092 conserved protein of unknown function K09927 K09927; uncharacterized protein
D AGREI_0053 conserved protein of unknown function K09931 K09931; uncharacterized protein
D AGREI_2757 Antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein
D AGREI_1290 conserved membrane protein of unknown function K09940 K09940; uncharacterized protein
D AGREI_1291 conserved membrane protein of unknown function K09940 K09940; uncharacterized protein
D AGREI_0062 putative Non-reducing end beta-L-arabinofuranosidase K09955 K09955; uncharacterized protein
D AGREI_2611 UDP-glucose 4-epimerase K09959 K09959; uncharacterized protein
D AGREI_1817 conserved exported protein of unknown function K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024