+D	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Prokaryotic Defense System - Actinoalloteichus hymeniacidonis</h2>
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A<b>CRISPR-Cas system</b>
B  Universal Cas proteins
B  Type I CRISPR-Cas system
C    Type I signiture cas proteins
D      TL08_12985 CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD	K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] 
D      TL08_20075 CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD	K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] 
C    Subtype I-A factors
C    Subtype I-B factors
C    Subtype I-C factors
D      TL08_12975 CRISPR-associated protein Csd1	K19117 csd1; CRISPR-associated protein Csd1 
D      TL08_12980 CRISPR-associated protein, Csd2 family	K19118 csd2; CRISPR-associated protein Csd2 
D      TL08_12970 CRISPR-associated protein Cas5	K19119 cas5d; CRISPR-associated protein Cas5d 
C    Subtype I-D factors
C    Subtype I-E factors
D      TL08_20065 CRISPR type I-E/ECOLI-associated protein CasA/Cse1	K19123 casA; CRISPR system Cascade subunit CasA 
D      TL08_20125 CRISPR type I-E/ECOLI-associated protein CasA/Cse1	K19123 casA; CRISPR system Cascade subunit CasA 
D      TL08_20060 CRISPR type I-E/ECOLI-associated protein CasB/Cse2	K19046 casB; CRISPR system Cascade subunit CasB 
D      TL08_20130 CRISPR type I-E/ECOLI-associated protein CasB/Cse2	K19046 casB; CRISPR system Cascade subunit CasB 
D      TL08_20055 CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	K19124 casC; CRISPR system Cascade subunit CasC 
D      TL08_20135 CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	K19124 casC; CRISPR system Cascade subunit CasC 
D      TL08_20050 CRISPR-associated protein Cas5	K19125 casD; CRISPR system Cascade subunit CasD 
D      TL08_20140 CRISPR-associated protein Cas5	K19125 casD; CRISPR system Cascade subunit CasD 
D      TL08_20045 CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	K19126 casE; CRISPR system Cascade subunit CasE 
D      TL08_20145 CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	K19126 casE; CRISPR system Cascade subunit CasE 
C    Subtype I-F factors
C    Subtype I-U factors
B  Type II CRISPR-Cas system
C    Type II signiture cas proteins
C    Subtype II-A factors
C    Subtype II-B factors
B  Type III CRISPR-Cas system
C    Type III signiture cas proteins
C    Subtype III-A factors
C    Subtype III-B factors
C    Subtype III-U factors
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A<b>Restriction and modification system (R-M system)</b>
B  Type I R-M system
C    TL08_16855 type I site-specific deoxyribonuclease	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] 
C    TL08_16860 restriction endonuclease S subunit	K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] 
C    TL08_05100 type I restriction-modification system methyltransferase subunit	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] 
C    TL08_16865 type I restriction-modification system methyltransferase subunit	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] 
B  Type II R-M system
C    Restriction endonucleases
C    DNA methyltransferases
D      TL08_13090 DNA-methyltransferase Dcm	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
B  Type III R-M system
B  Type IV R-M system
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A<b>Toxin-antitoxin system (TA system)</b>
B  Type I TA system
C    Hok-Sok
C    SymE-SymR
C    Ldr-Rdl
C    TisB-IstR
C    Ibs-Sib
C    ShoB-OhsC
C    RalR-RalA
B  Type II TA system
C    MazF-MazE
C    ChpB-ChpS
C    YhaV-PrlF
C    RelE/StbE-RelB/StbD
C    YafQ-dinJ
C    YoeB-YefM
C    HipA-HipB
C    HicA-HicB
C    YafO-YafN
C    Hha-TomB
C    PspC-PspB
D      TL08_25370 phage shock protein C (PspC) family protein	K03973 pspC; phage shock protein C 
C    CcdB-CcdA
C    ParE-ParD
C    Doc-Phd
C    HigB-HigA
C    MqsR-MqsA
C    VapC-VapB
C    PezT-PezA
C    YobL-YobK
C    YokI-YokJ
C    YqcG-YqcF
C    YxiD-YxxD
C    FitB-FitA
C    BC_0920-BC_0921
C    Type II TA system related factors
D      TL08_09530 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ 
D      TL08_22675 glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
B  Type III TA system
C    AbiQ system
B  Type IV TA system
C    YeeV-YeeU
C    CptA-CptB
B  Type V TA system
C    GhoT-GhoS
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A<b>DNA phosphothiolation system</b>
B  Sulfur modification proteins
C    TL08_06685 cysteine desulfurase family protein	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
B  DNA phosphorothioation-dependent restriction proteins
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#Last updated: November 7, 2023