+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Apis laboriosa (Himalayan honeybee)

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E 122717874 mRNA cap guanine-N7 methyltransferase isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E 122718246 mRNA-capping enzyme K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] E 122710525 cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E 122718515 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 isoform X1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] D Cap binding complex E 122718148 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1 E 122718991 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E 122716805 cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 E 122718753 cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 D Pre-mRNA cleavage factor IIm (CFIIm) E 122714439 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E 122718331 uncharacterized protein LOC122718331 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D Cleavage and polyadenylation specificity factor (CPSF) complex E 122712739 cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E 122714991 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 122713098 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 122712059 cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E 122711892 pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E 122718522 uncharacterized protein LOC122718522 K15542 PFS2; polyadenylation factor subunit 2 E 122716228 WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2 E 122716294 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 122719691 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 122718479 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E 122717649 cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1 E 122716282 cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 122720862 protein suppressor of forked K14408 CSTF3; cleavage stimulation factor subunit 3 E 122718299 symplekin isoform X1 K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E 122718989 small nuclear ribonucleoprotein-associated protein B K11086 SNRPB; small nuclear ribonucleoprotein B and B' E 122711412 small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 E 122710359 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F E 122712926 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G E 122716450 U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 E 122714991 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 122713098 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 122716282 cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 122718299 symplekin isoform X1 K06100 SYMPK; symplekin E 122713782 histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein D DRB sensitivity inducing factor (DSIF) complex E 122712615 transcription elongation factor SPT4 isoform X1 K15171 SUPT4H1; transcription elongation factor SPT4 E 122711785 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E 122719502 N6-adenosine-methyltransferase subunit METTL3 K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E 122716348 N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit E 122712011 N(6)-adenine-specific methyltransferase METTL4 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] E 122712223 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E 122717872 pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP E 122711972 protein virilizer isoform X1 K22910 VIRMA; protein virilizer E 122714453 RNA-binding protein spenito K13190 RBM15; RNA-binding protein 15 E 122720846 zinc finger CCCH domain-containing protein 13-like K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 122719165 uncharacterized protein DDB_G0283697-like isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 122720963 E3 ubiquitin-protein ligase Hakai K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] D Poly(A) addition factors E 122716761 poly(A) polymerase type 3 isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E 122718039 poly(A) RNA polymerase gld-2 homolog A-like isoform X1 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] E 122719238 speckle targeted PIP5K1A-regulated poly(A) polymerase-like K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52] D Negative regulators of mRNA 3' end processing E 122714587 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1 E 122712659 RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26 E 122717063 uncharacterized protein LOC122717063 isoform X1 K23600 TARDBP; TAR DNA-binding protein 43 E 122717535 TAR DNA-binding protein 43-like isoform X1 K23600 TARDBP; TAR DNA-binding protein 43 C Other processing factors D 122713417 inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B-like K13102 KIN; DNA/RNA-binding protein KIN17 D 122714279 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] D 122720305 terminal nucleotidyltransferase 5C isoform X1 K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] D 122713513 zinc finger CCCH domain-containing protein 14 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 D 122718312 serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E 122715563 RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A E 122712666 protein mago nashi homolog K12877 MAGOH; protein mago nashi E 122720479 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4 E 122716322 ATP-dependent RNA helicase WM6 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E 122714696 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 122717500 coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174 E 122720022 protein CASC3-like isoform X1 K14323 CASC3; protein CASC3 E 122713676 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18 E 122711850 pinin K13114 PNN; pinin E 122717900 RNA-binding protein with serine-rich domain 1-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1 E 122712079 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E 122716562 THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1 E 122717371 THO complex subunit 2 isoform X1 K12879 THOC2; THO complex subunit 2 E 122718820 THO complex subunit 3 K12880 THOC3; THO complex subunit 3 E 122720479 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4 E 122717038 THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5 E 122719117 THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6 E 122714633 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7 D TREX-2 complex E 122716578 PCI domain-containing protein 2 isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E 122715024 26S proteasome complex subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1 E 122715237 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor E 122716327 cell division control protein 31-like K16466 CETN3; centrin-3 D Nuclear pore complex E 122711970 nucleoprotein TPR K09291 TPR; nucleoprotein TPR E 122714634 protein Rae1 K14298 RAE1; mRNA export factor E 122715373 protein SEC13 homolog K14004 SEC13; protein transport protein SEC13 E 122716127 nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37 E 122712519 nuclear pore complex protein Nup85 K14304 NUP85; nuclear pore complex protein Nup85 E 122713868 nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43 E 122718596 nuclear pore complex protein Nup50 isoform X1 K14295 NUP50; nuclear pore complex protein Nup50 E 122716413 nuclear pore complex protein Nup54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54 E 122716772 nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62 E 122718693 nuclear pore complex protein Nup88 K14318 NUP88; nuclear pore complex protein Nup88 E 122718305 nuclear pore complex protein Nup93-like K14309 NUP93; nuclear pore complex protein Nup93 E 122717644 nuclear pore complex protein DDB_G0274915-like K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 122718240 nuclear pore complex protein Nup98-Nup96-like K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 122720820 nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107 E 122718310 nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133 E 122720814 nucleoporin Nup188 K14311 NUP188; nuclear pore complex protein Nup188 E 122710700 nuclear pore complex protein Nup153-like isoform X1 K14296 NUP153; nuclear pore complex protein Nup153 E 122716877 nuclear pore complex protein Nup154 isoform X1 K14312 NUP155; nuclear pore complex protein Nup155 E 122717326 nuclear pore complex protein Nup160 homolog K14303 NUP160; nuclear pore complex protein Nup160 E 122717149 nucleoporin Nup35 K14313 NUP35; nuclear pore complex protein Nup53 E 122718236 nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205 E 122715724 nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210 E 122716395 nuclear pore complex protein Nup214 K14317 NUP214; nuclear pore complex protein Nup214 E 122712465 nucleoporin p58/p45 isoform X1 K14307 NUPL1; nucleoporin p58/p45 E 122719891 nucleoporin NDC1 K14315 NDC1; nucleoporin NDC1 E 122714898 nucleoporin SEH1 K14299 SEH1; nucleoporin SEH1 E 122711984 E3 SUMO-protein ligase RanBP2-like K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] E 122710471 aladin-like K14320 AAAS; aladin E 122717861 nuclear pore complex protein DDB_G0274915-like isoform X1 K18716 NUP42; nucleoporin NUP42 E 122716327 cell division control protein 31-like K16466 CETN3; centrin-3 E 122716958 nucleoporin GLE1 isoform X1 K18723 GLE1; nucleoporin GLE1 E 122717132 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 122711683 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor E 122720682 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 122715706 NTF2-related export protein isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2 D Ran-mediated transport factors E 122717960 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran E 122719094 acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D E 122719492 ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 122718262 FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2 E 122714610 transitional endoplasmic reticulum ATPase TER94 K13525 VCP; transitional endoplasmic reticulum ATPase E 122721124 exportin-1 K14290 XPO1; exportin-1 E 122713055 exportin-7 isoform X1 K18460 XPO7; exportin-7 E 122721152 ran GTPase-activating protein 1 K14319 RANGAP1; Ran GTPase-activating protein 1 D eIF4F and regulatory proteins E 122710852 eukaryotic translation initiation factor 4E type 2-like isoform X1 K03259 EIF4E; translation initiation factor 4E E 122717755 eukaryotic translation initiation factor 4E-1A K03259 EIF4E; translation initiation factor 4E E 122717324 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A E 122718791 eukaryotic translation initiation factor 4 gamma 2 isoform X1 K03260 EIF4G; translation initiation factor 4G E 122718834 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G E 122712481 eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B E 122720881 eukaryotic translation initiation factor 4H isoform X1 K24086 EIF4H; translation initiation factor 4H E 122717045 eukaryotic translation initiation factor 4E-binding protein K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 E 122717499 eukaryotic translation initiation factor 4E transporter-like isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 122712489 protein angel isoform X1 K18729 ANGEL; protein angel E 122714611 synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein E 122719308 cytoplasmic FMR1-interacting protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E 122716105 gem-associated protein 5 K13133 GEMIN5; gem associated protein 5 E 122716042 cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 122710828 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 122714234 putative ATP-dependent RNA helicase Pl10 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 122717153 GIGYF family protein Gyf isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 122714097 polyadenylate-binding protein 1 isoform X1 K13126 PABPC; polyadenylate-binding protein E 122716971 polyadenylate-binding protein-interacting protein 1-like isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 E 122712859 uncharacterized protein LOC122712859 isoform X1 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 E 122715372 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 122711299 deformed epidermal autoregulatory factor 1 K23041 DEAF1; deformed epidermal autoregulatory factor 1 E 122720453 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence E 122712224 density-regulated protein homolog isoform X1 K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E 122714357 partner of Y14 and mago K14294 WIBG; partner of Y14 and mago E 122714429 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 122716049 RNA-binding protein Musashi homolog 2 isoform X1 K14411 MSI; RNA-binding protein Musashi E 122716121 heterogeneous nuclear ribonucleoprotein 27C isoform X1 K14411 MSI; RNA-binding protein Musashi E 122720579 RNA-binding protein Musashi homolog Rbp6 isoform X1 K14411 MSI; RNA-binding protein Musashi E 122719678 HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein E 122712323 protein pelota K06965 PELO; protein pelota E 122716589 polyadenylate-binding protein 2-B K14396 PABPN1; polyadenylate-binding protein 2 E 122717665 DEAD-box helicase Dbp80 isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E 122712610 pre-mRNA-splicing factor syf1 homolog isoform X1 K12867 SYF1; pre-mRNA-splicing factor SYF1 E 122711765 SAP domain-containing ribonucleoprotein isoform X1 K18732 SARNP; SAP domain-containing ribonucleoprotein E 122718367 regulator of chromosome condensation isoform X1 K11493 RCC1; regulator of chromosome condensation E 122710586 la-related protein 6 K18733 LARP6; la-related protein 6 E 122710486 transcriptional activator protein Pur-beta isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha E 122720147 uncharacterized protein LOC122720147 K22414 POLDIP3; polymerase delta-interacting protein 3 E 122711536 zinc finger CCCH domain-containing protein 11A-like K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 E 122713519 leukocyte receptor cluster member 8 homolog isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E 122716595 eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1 E 122717825 eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3 E 122718044 regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 122711591 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 122714063 regulator of nonsense transcripts 3A K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E 122718929 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E 122714835 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E 122712842 protein phosphatase PP2A 55 kDa regulatory subunit isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 122710507 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 122712070 uncharacterized protein LOC122712070 isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 122715132 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E 122710911 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E 122710974 serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 122718713 protein SMG5 K11125 SMG5; protein SMG5 E 122712259 telomerase-binding protein EST1A-like isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 122714152 protein SMG7-like K14409 SMG7; protein SMG7 E 122711459 protein SMG8 K18734 SMG8; protein SMG8 E 122711431 protein SMG9 isoform X1 K18735 SMG9; protein SMG9 E 122717153 GIGYF family protein Gyf isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 122713846 uncharacterized protein LOC122713846 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 E 122718456 probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E 122720201 GTP-binding protein 1 isoform X1 K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E 122712111 pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6 E 122716203 unconventional myosin-Va isoform X1 K10357 MYO5; myosin V E 122716237 protein bicaudal D isoform X1 K18739 BICD; protein bicaudal D E 122716246 egalitarian protein homolog K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals E 122716691 actin-5C K05692 ACTB_G1; actin beta/gamma 1 E 122717718 actin, clone 403-like E 122719662 uncharacterized protein LOC122719662 isoform X1 K04377 MYC; Myc proto-oncogene protein E 122720512 T-box protein 2-like K10180 TBX6; T-box protein 6 E 122719548 nanos homolog 3 K18741 NANOS1; protein nanos 1 E 122715588 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 122715589 enhancer of split m7 protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 122712134 protein hairy-like K09090 HESN; hairy and enhancer of split, invertebrate E 122712192 protein hairy K09090 HESN; hairy and enhancer of split, invertebrate E 122715552 enhancer of split mgamma protein-like K09090 HESN; hairy and enhancer of split, invertebrate D Trans-acting binding proteins E 122715614 far upstream element-binding protein 3 K13210 FUBP; far upstream element-binding protein E 122721094 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 122714789 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 122717927 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma E 122711920 uncharacterized protein LOC122711920 K16220 HAX1; HCLS1-associated protein X-1 E 122713445 arf-GAP domain and FG repeat-containing protein 1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 E 122711854 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 122717197 polypyrimidine tract-binding protein 2 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1 E 122719028 RNA-binding protein squid isoform X1 K03102 SQD; squid E 122720164 RNA-binding protein squid-like K03102 SQD; squid E 122716042 cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 122710828 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein D Other mRNA localization factors E 122714611 synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein E 122719308 cytoplasmic FMR1-interacting protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E 122715602 poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 122717443 caprin homolog K18743 CAPRIN1; caprin-1 E 122714451 CUGBP Elav-like family member 2 isoform X1 K02177 BRU; bruno E 122713529 maternal protein exuperantia K18745 EXU; maternal protein exuperantia E 122717721 Y-box factor homolog isoform X1 K09276 YBX1; Y-box-binding protein 1 E 122717167 sex-lethal homolog isoform X1 K18747 SXL; protein sex-lethal C mRNA cycle factors D Common to processing body (P body) and stress granule E 122717355 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 122717611 protein argonaute-2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 122711968 protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C E 122710852 eukaryotic translation initiation factor 4E type 2-like isoform X1 K03259 EIF4E; translation initiation factor 4E E 122717755 eukaryotic translation initiation factor 4E-1A K03259 EIF4E; translation initiation factor 4E E 122718044 regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 122714234 putative ATP-dependent RNA helicase Pl10 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 122711294 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 122719312 RNA-binding protein MEX3D-like K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] E 122711194 protein LSM14 homolog A isoform X1 K18749 LSM14; protein LSM14 E 122717721 Y-box factor homolog isoform X1 K09276 YBX1; Y-box-binding protein 1 E 122716147 LIM domain-containing protein jub K16682 AJUBA; LIM domain-containing protein E 122713931 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2 E 122714712 transportin-1 K18752 TNPO1; transportin-1 E 122710974 serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 122718713 protein SMG5 K11125 SMG5; protein SMG5 E 122712259 telomerase-binding protein EST1A-like isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 122714152 protein SMG7-like K14409 SMG7; protein SMG7 E 122712168 protein TIS11 K15308 TTP; tristetraprolin E 122716034 huntingtin isoform X1 K04533 HD; huntingtin E 122716344 protein bicaudal C homolog 1-B isoform X1 K18756 BICC1; protein bicaudal C E 122714429 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 122715902 cAMP-dependent protein kinase catalytic subunit 1-like K04345 PKA; protein kinase A [EC:2.7.11.11] E 122711603 cAMP-dependent protein kinase catalytic subunit 1 K04345 PKA; protein kinase A [EC:2.7.11.11] E 122718798 la-related protein 1B isoform X1 K18757 LARP1; la-related protein 1 E 122716920 ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L D P-body specific factors E 122716014 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 122716205 mRNA-decapping enzyme 1A K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 122715852 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 122712063 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 122720554 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 122716323 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 122710571 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 122715789 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 122718168 U6 snRNA-associated Sm-like protein LSm7 isoform X1 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 122713854 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E 122713386 kinesin light chain isoform X1 K10407 KLC; kinesin light chain E 122716203 unconventional myosin-Va isoform X1 K10357 MYO5; myosin V E 122715665 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 122710875 tubulin alpha-1C chain-like K07374 TUBA; tubulin alpha E 122718912 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 122713001 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 122713030 tubulin alpha chain-like K07374 TUBA; tubulin alpha E 122713046 tubulin alpha chain-like K07374 TUBA; tubulin alpha E 122721034 tubulin alpha-1 chain K07374 TUBA; tubulin alpha E 122716042 cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 122710828 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 122716105 gem-associated protein 5 K13133 GEMIN5; gem associated protein 5 E 122714606 protein Gawky isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein E 122716711 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 122713595 CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 122711832 CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 122713709 alpha-protein kinase 1 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 122719083 CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 122718711 CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 122711290 DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E 122712140 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 122716897 PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E 122718382 maternal B9.10 protein-like K14443 TOB; protein Tob/BTG E 122712420 protein Tob1-like isoform X1 K14443 TOB; protein Tob/BTG E 122719226 protein BTG2-like K14443 TOB; protein Tob/BTG E 122717499 eukaryotic translation initiation factor 4E transporter-like isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 122720774 protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 122720406 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 122721114 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 122711591 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 122714063 regulator of nonsense transcripts 3A K14328 UPF3; regulator of nonsense transcripts 3 E 122715568 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 122716113 RING finger protein nhl-1 isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 122716382 DNA-directed RNA polymerase II subunit RPB7 isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E 122714058 YTH domain-containing family protein 1 K20102 YTHDF; YTH domain-containing family protein D Stress granule specific factors E 122715719 nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR E 122714740 nucleolysin TIAR K13201 TIA1; nucleolysin TIA-1/TIAR E 122714097 polyadenylate-binding protein 1 isoform X1 K13126 PABPC; polyadenylate-binding protein E 122711854 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 122714611 synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein E 122719072 ras GTPase-activating protein-binding protein 1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E 122714786 eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A E 122715596 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B E 122717324 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A E 122714696 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 122712481 eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B E 122718791 eukaryotic translation initiation factor 4 gamma 2 isoform X1 K03260 EIF4G; translation initiation factor 4G E 122718834 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G E 122715352 ribosomal protein S6 kinase 2 beta-like isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] E 122718927 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 122717132 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 122711683 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor E 122720682 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 122713471 histone deacetylase 6 isoform X1 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] E 122717893 tudor domain-containing protein 3 isoform X1 K18404 TDRD3; tudor domain-containing protein 3 E 122716223 la-related protein 4 isoform X1 K18763 LARP4; la-related protein 4 B mRNA degradation factors C 5'-3' decay D Decapping complex E 122716205 mRNA-decapping enzyme 1A K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 122716014 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 122711294 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 122720406 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 122721114 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 122720774 protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D Lsm complex E 122715852 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 122712063 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 122720554 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 122716323 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 122710571 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 122715789 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 122718168 U6 snRNA-associated Sm-like protein LSm7 isoform X1 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 122713854 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases E 122717355 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 122714732 5'-3' exoribonuclease 2 homolog isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D Other 5'-3' decay factors E 122716957 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E 122715126 probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] C 3'-5' decay D Core exosome factors E 122713884 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4 E 122716358 uncharacterized protein LOC122716358 K03679 RRP4; exosome complex component RRP4 E 122719109 exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40 E 122710819 exosome complex component RRP41 isoform X1 K11600 RRP41; exosome complex component RRP41 E 122715103 exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46 E 122714538 exosome complex component MTR3-like K12587 MTR3; exosome complex component MTR3 E 122715775 exosome complex component RRP42-like isoform X1 K12589 RRP42; exosome complex component RRP42 E 122718422 exosome complex component RRP43-like K12586 RRP43; exosome complex component RRP43 E 122715037 exosome complex component RRP45 isoform X1 K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E 122717964 exosome complex exonuclease RRP44 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] E 122717664 exosome component 10 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E 122714203 nuclear nucleic acid-binding protein C1D-like isoform X1 K12592 C1D; exosome complex protein LRP1 E 122710889 M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type D TRAMP complex E 122718463 terminal nucleotidyltransferase 4B-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E 122718438 exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E 122715372 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 122719031 tetratricopeptide repeat protein 37 isoform X1 K12600 SKI3; superkiller protein 3 E 122718543 WD repeat-containing protein 61 K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E 122719083 CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 122716711 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 122713595 CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 122711832 CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 122713709 alpha-protein kinase 1 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 122718711 CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 122717743 CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9 E 122710623 CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10 D Pan complex E 122712140 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 122716897 PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E 122716483 poly(A)-specific ribonuclease PARN-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 122720959 pre-piRNA 3'-exonuclease trimmer-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 122712597 ATP-dependent DNA/RNA helicase DHX36-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E 122718382 maternal B9.10 protein-like K14443 TOB; protein Tob/BTG E 122712420 protein Tob1-like isoform X1 K14443 TOB; protein Tob/BTG E 122719226 protein BTG2-like K14443 TOB; protein Tob/BTG E 122716957 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E 122713293 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E 122715126 probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] E 122720126 nuclear exosome regulator NRDE2 K26109 NRDE2; nuclear exosome regulator NRDE2 E 122710368 protein Smaug homolog 1 K27396 SMG; protein Smaug E 122714886 focadhesin isoform X1 K27498 FOCAD; focadhesin C Other degradation factors D RNases E 122712347 NEDD4-binding protein 1-like K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] E 122714954 LOW QUALITY PROTEIN: probable ribonuclease ZC3H12C K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E 122716445 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] E 122715931 LOW QUALITY PROTEIN: probable oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] E 122720759 probable oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E 122717609 enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 122719665 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 122715065 polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E 122711831 ATP-dependent 6-phosphofructokinase isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E 122715708 heat shock 70 kDa protein cognate 5 K04043 dnaK; molecular chaperone DnaK E 122717733 heat shock protein 60A-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E 122716358 uncharacterized protein LOC122716358 K03679 RRP4; exosome complex component RRP4 E 122713884 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4 D Cofactors E 122710819 exosome complex component RRP41 isoform X1 K11600 RRP41; exosome complex component RRP41 E 122715775 exosome complex component RRP42-like isoform X1 K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024