+F Chromosome and associated proteins KO
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Chromosome and Associated Proteins - Azospirillum lipoferum
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AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
E AZOLI_0612 conserved protein of unknown function; putative TPR domain K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E AZOLI_1877 conserved protein of unknown function; glycosyltransferase and TPR domains K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E AZOLI_p30436 conserved protein of unknown function; putative TPR domains K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E AZOLI_3149 protein of unknown function; putative TPR repeat domains K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E AZOLI_p60009 conserved protein of unknown function; putative TPR domains K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E AZOLI_p60052 conserved protein of unknown function; putative TPR domains K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
E AZOLI_0612 conserved protein of unknown function; putative TPR domain K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E AZOLI_1877 conserved protein of unknown function; glycosyltransferase and TPR domains K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E AZOLI_p30436 conserved protein of unknown function; putative TPR domains K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E AZOLI_3149 protein of unknown function; putative TPR repeat domains K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E AZOLI_p60009 conserved protein of unknown function; putative TPR domains K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E AZOLI_p60052 conserved protein of unknown function; putative TPR domains K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
D AZOLI_p10441 dcm; Cytosine-specific methyltransferase HgiDII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E AZOLI_1504 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
D AZOLI_1986 conserved protein of unknown function; putative methylase domain K26273 SBNO; protein strawberry notch
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AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
C HU (heat unstable protein)
D AZOLI_1856 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D AZOLI_1275 hupA; HU DNA-binding transcriptional regulator, alpha subunit K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
D AZOLI_0880 ihfA; integration host factor alpha-subunit (IHF-alpha) K04764 ihfA; integration host factor subunit alpha
D AZOLI_2774 ihfB; Integration host factor beta-subunit (IHF-beta) K05788 ihfB; integration host factor subunit beta
C Other nucleoid associated proteins
D AZOLI_0002 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D AZOLI_2785 dps; DNA-binding ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D AZOLI_1349 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D AZOLI_2218 argP; Transcriptional regulator of dnaA and argK (replication initiation inhibitor) K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D AZOLI_p10012 transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AZOLI_p20633 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AZOLI_p10188 transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AZOLI_p20560 acdR; transcriptional regulator of AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AZOLI_p40360 transcriptional regulator, AsnC/Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
B Chromosome partitioning proteins
C MukBEF complex
C Condensin-like complex
D AZOLI_p30343 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D AZOLI_p10767 putative chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D AZOLI_p10766 putative chromosome segregation and condensation protein ScpB K06024 scpB; segregation and condensation protein B
C Divisome proteins
D AZOLI_2136 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AZOLI_p40125 ftsE; Cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D AZOLI_2124 ftsI; division-specific transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AZOLI_0155 ftsK1; DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AZOLI_p40638 ftsK2; DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AZOLI_2123 protein of unknown function K03586 ftsL; cell division protein FtsL
D AZOLI_2135 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D AZOLI_2129 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AZOLI_p40126 conserved membrane protein of unknown function K09811 ftsX; cell division transport system permease protein
D AZOLI_2137 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AZOLI_0821 conserved protein of unknown function K09888 zapA; cell division protein ZapA
D AZOLI_0707 putative ATPase, AFG1 family K06916 zapE; cell division protein ZapE
D AZOLI_p10327 putative N-acetylmuramoyl-L-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AZOLI_0387 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AZOLI_p20171 acrA2; Multidrug efflux transporter, AcrA component K03585 acrA; membrane fusion protein, multidrug efflux system
D AZOLI_p10827 RND efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AZOLI_p10815 putative RND efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AZOLI_p50394 acrA1; Multidrug efflux transporter, AcrA component K03585 acrA; membrane fusion protein, multidrug efflux system
C Inhibitors of FtsZ assembly
D AZOLI_0652 minC; Septum formation inhibitor K03610 minC; septum site-determining protein MinC
D AZOLI_0653 minD; Septum site-determining protein K03609 minD; septum site-determining protein MinD
D AZOLI_0654 minE; Septum formation topological specificity factor K03608 minE; cell division topological specificity factor
C Other chromosome partitioning proteins
D AZOLI_2228 mreB; Cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D AZOLI_2229 mreC; Cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D AZOLI_2230 mreD; Cell shape determining protein MreD K03571 mreD; rod shape-determining protein MreD
D AZOLI_p10649 mrdB; cell wall shape-determining protein K05837 rodA; rod shape determining protein RodA
D AZOLI_p20743 Putative ParA-like partition protein (ATPase) K03496 parA; chromosome partitioning protein
D AZOLI_2628 putative chromosome partition protein K03496 parA; chromosome partitioning protein
D AZOLI_3020 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein
D AZOLI_p20747 putative ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D AZOLI_2026 Putative conjugational transfer protein, VirC1-like K03496 parA; chromosome partitioning protein
D AZOLI_p30443 putative partition-related protein K03496 parA; chromosome partitioning protein
D AZOLI_2475 Putative cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D AZOLI_p20056 putative chromosome partition protein K03496 parA; chromosome partitioning protein
D AZOLI_p20058 Putative partition protein K03496 parA; chromosome partitioning protein
D AZOLI_p10435 putative partition protein (ParA) K03496 parA; chromosome partitioning protein
D AZOLI_p40067 putative ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D AZOLI_p60234 Putative ATPases involved in chromosome partitioning, ParA-like K03496 parA; chromosome partitioning protein
D AZOLI_p50414 Putative ParA-like partition protein (ATPase) K03496 parA; chromosome partitioning protein
D AZOLI_p10053 putative chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D AZOLI_p30243 putative ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AZOLI_3019 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AZOLI_p20742 Putative ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AZOLI_1985 conserved protein of unknown function; putative ParB nuclease domain K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AZOLI_p50415 Putative ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AZOLI_p10054 putative chromosome-partitioning ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AZOLI_1732 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AZOLI_1631 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AZOLI_3022 gidA; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AZOLI_3021 gidB; Glucose inhibited division protein B; Methyltransferase gidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AZOLI_1385 trmFO; Methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D AZOLI_2613 xerC; Site-specific tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D AZOLI_p10448 putative phage integrase K03733 xerC; integrase/recombinase XerC
D AZOLI_0097 putative Phage integrase K03733 xerC; integrase/recombinase XerC
D AZOLI_2940 xerD; site-specific tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D AZOLI_p40466 putative ATPase of the MinD/MRP superfamily K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AZOLI_0379 putative GTP-binding protein K03978 engB; GTP-binding protein
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024