+D	GENES	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a> &nbsp; KEGG Orthology (KO) - Alkalimarinus alittae </h2>
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A09100 Metabolism
B
B  09101 Carbohydrate metabolism
C    00010 Glycolysis / Gluconeogenesis [PATH:alkm00010]
D      NKI27_17805 pgi; glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      NKI27_15490 6-phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      NKI27_15290 fba; fructose-bisphosphate aldolase class II	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      NKI27_03615 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      NKI27_11695 glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      NKI27_15295 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      NKI27_04600 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      NKI27_06310 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      NKI27_11545 ppsA; phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      NKI27_03735 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      NKI27_03740 aceF; dihydrolipoyllysine-residue acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_10660 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      NKI27_05235 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      NKI27_18495 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NKI27_16940 phosphomannomutase/phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      NKI27_02035 phosphoenolpyruvate carboxykinase	K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C    00020 Citrate cycle (TCA cycle) [PATH:alkm00020]
D      NKI27_08390 gltA; citrate synthase	K01647 CS; citrate synthase [EC:2.3.3.1]
D      NKI27_06125 acnA; aconitate hydratase AcnA	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      NKI27_11350 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      NKI27_15655 NADP-dependent isocitrate dehydrogenase	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      NKI27_08415 2-oxoglutarate dehydrogenase E1 component	K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D      NKI27_08420 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08435 sucD; succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      NKI27_08430 sucC; ADP-forming succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      NKI27_08405 sdhA; succinate dehydrogenase flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      NKI27_08410 succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      NKI27_11060 succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      NKI27_08395 sdhC; succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      NKI27_08400 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      NKI27_12450 fumarate hydratase	K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D      NKI27_00265 class II fumarate hydratase	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      NKI27_00855 malate:quinone oxidoreductase	K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D      NKI27_18775 mqo; malate dehydrogenase (quinone)	K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D      NKI27_15570 acetyl-CoA carboxylase biotin carboxylase subunit	K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D      NKI27_15575 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha	K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D      NKI27_02035 phosphoenolpyruvate carboxykinase	K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D      NKI27_03735 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      NKI27_03740 aceF; dihydrolipoyllysine-residue acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C    00030 Pentose phosphate pathway [PATH:alkm00030]
D      NKI27_17805 pgi; glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      NKI27_10710 zwf; glucose-6-phosphate dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      NKI27_10705 pgl; 6-phosphogluconolactonase	K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D      NKI27_02660 rpe; ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D      NKI27_15305 tkt; transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      NKI27_11635 tal; transaldolase	K00616 TALDO1; transaldolase [EC:2.2.1.2]
D      NKI27_03040 rpiA; ribose-5-phosphate isomerase RpiA	K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D      NKI27_18495 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NKI27_16940 phosphomannomutase/phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      NKI27_00440 phnN; ribose 1,5-bisphosphokinase	K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D      NKI27_04175 ribose-phosphate diphosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      NKI27_10455 ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      NKI27_13870 ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      NKI27_10700 edd; phosphogluconate dehydratase	K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D      NKI27_10695 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D      NKI27_15290 fba; fructose-bisphosphate aldolase class II	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      NKI27_15490 6-phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C    00040 Pentose and glucuronate interconversions [PATH:alkm00040]
D      NKI27_07570 UDP-glucose/GDP-mannose dehydrogenase family protein	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      NKI27_07940 galU; UTP--glucose-1-phosphate uridylyltransferase GalU	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      NKI27_02660 rpe; ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C    00051 Fructose and mannose metabolism [PATH:alkm00051]
D      NKI27_13050 ROK family protein	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D      NKI27_00740 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      NKI27_13665 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      NKI27_00735 phosphomannomutase	K01840 manB; phosphomannomutase [EC:5.4.2.8]
D      NKI27_16940 phosphomannomutase/phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      NKI27_15490 6-phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      NKI27_00790 UDP-glucose/GDP-mannose dehydrogenase family protein	K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D      NKI27_00785 glycosyltransferase family 2 protein	K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D      NKI27_00780 alginate biosynthesis protein Alg44	K19291 alg44; mannuronan synthase [EC:2.4.1.33]
D      NKI27_00770 right-handed parallel beta-helix repeat-containing protein	K01795 algG; mannuronan 5-epimerase [EC:5.1.3.37]
D      NKI27_00745 mannuronate-specific alginate lyase	K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D      NKI27_15290 fba; fructose-bisphosphate aldolase class II	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      NKI27_03615 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C    00052 Galactose metabolism [PATH:alkm00052]
D      NKI27_07565 galE; UDP-glucose 4-epimerase GalE	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      NKI27_07940 galU; UTP--glucose-1-phosphate uridylyltransferase GalU	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      NKI27_18495 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NKI27_16940 phosphomannomutase/phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      NKI27_15490 6-phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C    00053 Ascorbate and aldarate metabolism [PATH:alkm00053]
D      NKI27_07570 UDP-glucose/GDP-mannose dehydrogenase family protein	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      NKI27_07715 NAD-dependent epimerase	K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C    00500 Starch and sucrose metabolism [PATH:alkm00500]
D      NKI27_07940 galU; UTP--glucose-1-phosphate uridylyltransferase GalU	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      NKI27_18495 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NKI27_16940 phosphomannomutase/phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      NKI27_17805 pgi; glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      NKI27_13050 ROK family protein	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C    00520 Amino sugar and nucleotide sugar metabolism [PATH:alkm00520]
D      NKI27_11720 nagZ; beta-N-acetylhexosaminidase	K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D      NKI27_13050 ROK family protein	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D      NKI27_00095 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      NKI27_03610 glmM; phosphoglucosamine mutase	K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D      NKI27_00090 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D      NKI27_17675 anhydro-N-acetylmuramic acid kinase	K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D      NKI27_12640 HAD-IA family hydrolase	K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D      NKI27_02675 phosphotransferase	K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D      NKI27_02670 nucleotidyltransferase family protein	K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D      NKI27_14130 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      NKI27_09555 murB; UDP-N-acetylmuramate dehydrogenase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      NKI27_13690 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D      NKI27_13880 Gfo/Idh/MocA family oxidoreductase	K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D      NKI27_13890 DegT/DnrJ/EryC1/StrS family aminotransferase	K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D      NKI27_13885 N-acetyltransferase	K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D      NKI27_13895 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D      NKI27_13845 NAD-dependent epimerase/dehydratase family protein	K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D      NKI27_09565 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D      NKI27_13700 polysaccharide biosynthesis protein	K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D      NKI27_18495 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NKI27_16940 phosphomannomutase/phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      NKI27_07940 galU; UTP--glucose-1-phosphate uridylyltransferase GalU	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      NKI27_07570 UDP-glucose/GDP-mannose dehydrogenase family protein	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      NKI27_07565 galE; UDP-glucose 4-epimerase GalE	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      NKI27_07715 NAD-dependent epimerase	K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D      NKI27_17805 pgi; glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      NKI27_00735 phosphomannomutase	K01840 manB; phosphomannomutase [EC:5.4.2.8]
D      NKI27_00740 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      NKI27_13665 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      NKI27_00790 UDP-glucose/GDP-mannose dehydrogenase family protein	K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D      NKI27_01495 2Fe-2S iron-sulfur cluster-binding protein	K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C    00620 Pyruvate metabolism [PATH:alkm00620]
D      NKI27_05235 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      NKI27_03735 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      NKI27_03740 aceF; dihydrolipoyllysine-residue acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_10660 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      NKI27_08290 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      NKI27_08285 pta; phosphate acetyltransferase	K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      NKI27_06290 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      NKI27_02920 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      NKI27_02915 accC; acetyl-CoA carboxylase biotin carboxylase subunit	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      NKI27_09020 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      NKI27_10450 2-hydroxyacid dehydrogenase	K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D      NKI27_15710 gloA; lactoylglutathione lyase	K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D      NKI27_09145 gloB; hydroxyacylglutathione hydrolase	K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D      NKI27_11610 MBL fold metallo-hydrolase	K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D      NKI27_16970 malate dehydrogenase	K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D      NKI27_12940 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha	K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D      NKI27_12935 sodium ion-translocating decarboxylase subunit beta	K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D      NKI27_12945 OadG family protein	K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D      NKI27_15570 acetyl-CoA carboxylase biotin carboxylase subunit	K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D      NKI27_15575 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha	K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D      NKI27_00855 malate:quinone oxidoreductase	K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D      NKI27_18775 mqo; malate dehydrogenase (quinone)	K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D      NKI27_12450 fumarate hydratase	K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D      NKI27_00265 class II fumarate hydratase	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      NKI27_05135 ppc; phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      NKI27_02035 phosphoenolpyruvate carboxykinase	K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D      NKI27_11545 ppsA; phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      NKI27_09400 malate synthase G	K01638 aceB; malate synthase [EC:2.3.3.9]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_16180 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D      NKI27_18750 leuA; 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C    00630 Glyoxylate and dicarboxylate metabolism [PATH:alkm00630]
D      NKI27_11920 isocitrate lyase	K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D      NKI27_05235 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      NKI27_09400 malate synthase G	K01638 aceB; malate synthase [EC:2.3.3.9]
D      NKI27_08390 gltA; citrate synthase	K01647 CS; citrate synthase [EC:2.3.3.1]
D      NKI27_06125 acnA; aconitate hydratase AcnA	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      NKI27_11350 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12500 phbB; acetoacetyl-CoA reductase	K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D      NKI27_08790 MaoC family dehydratase N-terminal domain-containing protein	K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D      NKI27_11405 ccrA; crotonyl-CoA carboxylase/reductase	K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85]
D      NKI27_11410 mce; methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      NKI27_11395 protein meaA	K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D      NKI27_11390 acyl-CoA/acyl-ACP dehydrogenase	K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D      NKI27_02655 phosphoglycolate phosphatase	K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D      NKI27_11480 HAD-IA family hydrolase	K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D      NKI27_02390 glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_13225 glutamine synthetase III	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_17200 glnA; glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_16420 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      NKI27_17050 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA	K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D      NKI27_17045 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB	K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D      NKI27_17060 gcvT; glycine cleavage system aminomethyltransferase GcvT	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_17055 gcvH; glycine cleavage system protein GcvH	K02437 gcvH; glycine cleavage system H protein
D      NKI27_10695 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D      NKI27_12440 purU; formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      NKI27_03280 acetamidase/formamidase family protein	K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C    00640 Propanoate metabolism [PATH:alkm00640]
D      NKI27_05235 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      NKI27_10775 propionyl-CoA synthetase	K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D      NKI27_08290 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      NKI27_08285 pta; phosphate acetyltransferase	K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      NKI27_01660 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D      NKI27_01655 alpha-ketoacid dehydrogenase subunit beta	K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D      NKI27_01650 2-oxo acid dehydrogenase subunit E2	K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_02375 oxidoreductase	K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D      NKI27_08370 fadB; fatty acid oxidation complex subunit alpha FadB	K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D      NKI27_12605 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      NKI27_06290 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      NKI27_02920 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      NKI27_02915 accC; acetyl-CoA carboxylase biotin carboxylase subunit	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      NKI27_09020 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      NKI27_11410 mce; methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      NKI27_08430 sucC; ADP-forming succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      NKI27_08435 sucD; succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      NKI27_02265 CoA-acylating methylmalonate-semialdehyde dehydrogenase	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      NKI27_13325 prpC; 2-methylcitrate synthase	K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D      NKI27_13320 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD	K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D      NKI27_13315 prpF; 2-methylaconitate cis-trans isomerase PrpF	K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D      NKI27_11350 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      NKI27_13330 prpB; methylisocitrate lyase	K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D      NKI27_11565 methylglyoxal synthase	K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D      NKI27_09380 iron-containing alcohol dehydrogenase	K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C    00650 Butanoate metabolism [PATH:alkm00650]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_08370 fadB; fatty acid oxidation complex subunit alpha FadB	K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D      NKI27_12605 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      NKI27_13455 trans-2-enoyl-CoA reductase family protein	K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D      NKI27_08790 MaoC family dehydratase N-terminal domain-containing protein	K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D      NKI27_08965 phaC; class I poly(R)-hydroxyalkanoic acid synthase	K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D      NKI27_14685 alpha/beta fold hydrolase	K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D      NKI27_14505 alpha/beta fold hydrolase	K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D      NKI27_12500 phbB; acetoacetyl-CoA reductase	K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D      NKI27_12935 sodium ion-translocating decarboxylase subunit beta	K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D      NKI27_08405 sdhA; succinate dehydrogenase flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      NKI27_08410 succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      NKI27_11060 succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      NKI27_08395 sdhC; succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      NKI27_08400 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      NKI27_10195 hydroxymethylglutaryl-CoA lyase	K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D      NKI27_10190 acetoacetate--CoA ligase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      NKI27_03500 acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_16215 acetolactate synthase 3 large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_18890 ilvG; acetolactate synthase 2 catalytic subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_16210 ilvN; acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C    00660 C5-Branched dibasic acid metabolism [PATH:alkm00660]
D      NKI27_03500 acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_16215 acetolactate synthase 3 large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_18890 ilvG; acetolactate synthase 2 catalytic subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_16210 ilvN; acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      NKI27_08430 sucC; ADP-forming succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      NKI27_08435 sucD; succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      NKI27_08975 leuC; 3-isopropylmalate dehydratase large subunit	K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D      NKI27_08980 leuD; 3-isopropylmalate dehydratase small subunit	K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D      NKI27_08985 leuB; 3-isopropylmalate dehydrogenase	K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C    00562 Inositol phosphate metabolism [PATH:alkm00562]
D      NKI27_02265 CoA-acylating methylmalonate-semialdehyde dehydrogenase	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      NKI27_03615 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B  09102 Energy metabolism
C    00190 Oxidative phosphorylation [PATH:alkm00190]
D      NKI27_00840 NAD(P)/FAD-dependent oxidoreductase	K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      NKI27_08405 sdhA; succinate dehydrogenase flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      NKI27_08410 succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      NKI27_11060 succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      NKI27_08395 sdhC; succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      NKI27_08400 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      NKI27_16135 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit	K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D      NKI27_16130 cytochrome bc complex cytochrome b subunit	K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D      NKI27_16125 cytochrome c1	K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D      NKI27_18990 cyoE; heme o synthase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      NKI27_00530 cytochrome c oxidase subunit 3 family protein	K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D      NKI27_19015 cytochrome c oxidase subunit 3	K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D      NKI27_19025 ctaD; cytochrome c oxidase subunit I	K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D      NKI27_19030 coxB; cytochrome c oxidase subunit II	K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D      NKI27_19020 cytochrome c oxidase assembly protein	K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D      NKI27_18995 COX15/CtaA family protein	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      NKI27_06450 cbb3-type cytochrome c oxidase subunit I	K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D      NKI27_11165 ccoN; cytochrome-c oxidase, cbb3-type subunit I	K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D      NKI27_06445 cbb3-type cytochrome c oxidase subunit II	K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D      NKI27_11170 ccoO; cytochrome-c oxidase, cbb3-type subunit II	K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D      NKI27_11175 cbb3-type cytochrome c oxidase subunit 3	K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D      NKI27_11180 ccoP; cytochrome-c oxidase, cbb3-type subunit III	K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D      NKI27_08665 cytochrome ubiquinol oxidase subunit I	K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D      NKI27_08670 cydB; cytochrome d ubiquinol oxidase subunit II	K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D      NKI27_00070 atpA; F0F1 ATP synthase subunit alpha	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      NKI27_00080 atpD; F0F1 ATP synthase subunit beta	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      NKI27_00075 atpG; F0F1 ATP synthase subunit gamma	K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D      NKI27_00065 F0F1 ATP synthase subunit delta	K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D      NKI27_00085 F0F1 ATP synthase subunit epsilon	K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D      NKI27_00050 atpB; F0F1 ATP synthase subunit A	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      NKI27_00060 F0F1 ATP synthase subunit B	K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D      NKI27_00055 atpE; F0F1 ATP synthase subunit C	K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D      NKI27_02980 ppa; inorganic diphosphatase	K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D      NKI27_16575 ppk1; polyphosphate kinase 1	K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C    00195 Photosynthesis
C    00196 Photosynthesis - antenna proteins
C    00710 Carbon fixation by Calvin cycle [PATH:alkm00710]
D      NKI27_15295 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      NKI27_11695 glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      NKI27_15290 fba; fructose-bisphosphate aldolase class II	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      NKI27_15305 tkt; transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      NKI27_03040 rpiA; ribose-5-phosphate isomerase RpiA	K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D      NKI27_16900 phosphoribulokinase	K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D      NKI27_03615 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      NKI27_02660 rpe; ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D      NKI27_11635 tal; transaldolase	K00616 TALDO1; transaldolase [EC:2.2.1.2]
D      NKI27_05135 ppc; phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      NKI27_02035 phosphoenolpyruvate carboxykinase	K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D      NKI27_16970 malate dehydrogenase	K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
C    00720 Other carbon fixation pathways [PATH:alkm00720]
D      NKI27_11545 ppsA; phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      NKI27_05135 ppc; phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      NKI27_15570 acetyl-CoA carboxylase biotin carboxylase subunit	K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D      NKI27_15575 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha	K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D      NKI27_12450 fumarate hydratase	K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D      NKI27_00265 class II fumarate hydratase	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      NKI27_08405 sdhA; succinate dehydrogenase flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      NKI27_08410 succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      NKI27_11060 succinate dehydrogenase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      NKI27_08395 sdhC; succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      NKI27_08400 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      NKI27_08435 sucD; succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      NKI27_08430 sucC; ADP-forming succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_15655 NADP-dependent isocitrate dehydrogenase	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      NKI27_06125 acnA; aconitate hydratase AcnA	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      NKI27_11350 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      NKI27_06290 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      NKI27_02920 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      NKI27_02915 accC; acetyl-CoA carboxylase biotin carboxylase subunit	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      NKI27_09020 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      NKI27_11380 CoA transferase	K14470 mct; 2-methylfumaryl-CoA isomerase [EC:5.4.1.3]
D      NKI27_11375 MaoC family dehydratase N-terminal domain-containing protein	K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D      NKI27_11410 mce; methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      NKI27_11320 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      NKI27_15350 metF; methylenetetrahydrofolate reductase [NAD(P)H]	K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D      NKI27_08285 pta; phosphate acetyltransferase	K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      NKI27_08290 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      NKI27_05235 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C    00680 Methane metabolism [PATH:alkm00680]
D      NKI27_10660 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      NKI27_10655 fghA; S-formylglutathione hydrolase	K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D      NKI27_16420 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      NKI27_06310 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      NKI27_05135 ppc; phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      NKI27_15290 fba; fructose-bisphosphate aldolase class II	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      NKI27_15490 6-phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      NKI27_08290 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      NKI27_08285 pta; phosphate acetyltransferase	K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      NKI27_05235 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      NKI27_11545 ppsA; phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      NKI27_04600 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      NKI27_03845 glyoxylate/hydroxypyruvate reductase A	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      NKI27_15255 serA; phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      NKI27_12425 serC; 3-phosphoserine/phosphohydroxythreonine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      NKI27_18490 phosphoserine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      NKI27_04280 serB; phosphoserine phosphatase SerB	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D      NKI27_08860 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH	K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C    00910 Nitrogen metabolism [PATH:alkm00910]
D      NKI27_03280 acetamidase/formamidase family protein	K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D      NKI27_15690 NarK family nitrate/nitrite MFS transporter	K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D      NKI27_01430 napA; nitrate reductase catalytic subunit NapA	K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D      NKI27_01425 nitrate reductase cytochrome c-type subunit	K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D      NKI27_15705 molybdopterin-dependent oxidoreductase	K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D      NKI27_15695 nirB; nitrite reductase large subunit NirB	K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D      NKI27_15700 nirD; nitrite reductase small subunit NirD	K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D      NKI27_07190 nitrite reductase	K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D      NKI27_07200 cbb3-type cytochrome c oxidase subunit I	K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D      NKI27_07195 cytochrome c	K02305 norC; nitric oxide reductase subunit C
D      NKI27_02965 nosZ; TAT-dependent nitrous-oxide reductase	K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D      NKI27_07525 NAD-glutamate dehydrogenase	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      NKI27_02200 gdhA; NADP-specific glutamate dehydrogenase	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      NKI27_02390 glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_13225 glutamine synthetase III	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_17200 glnA; glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_16455 gltB; glutamate synthase large subunit	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      NKI27_16450 FAD-dependent oxidoreductase	K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D      NKI27_10725 cynS; cyanase	K01725 cynS; cyanate lyase [EC:4.2.1.104]
D      NKI27_15580 carbonic anhydrase	K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C    00920 Sulfur metabolism [PATH:alkm00920]
D      NKI27_05050 cysN; sulfate adenylyltransferase subunit CysN	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      NKI27_05055 cysD; sulfate adenylyltransferase subunit CysD	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      NKI27_02055 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ	K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D      NKI27_08855 phosphoadenylyl-sulfate reductase	K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D      NKI27_09185 nitrite/sulfite reductase	K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D      NKI27_04315 rhodanese-like domain-containing protein	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      NKI27_18525 glpE; thiosulfate sulfurtransferase GlpE	K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D      NKI27_08225 cysE; serine O-acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      NKI27_08730 cysK; cysteine synthase A	K01738 cysK; cysteine synthase [EC:2.5.1.47]
D      NKI27_18140 homoserine O-acetyltransferase	K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D      NKI27_09045 O-succinylhomoserine sulfhydrylase	K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D      NKI27_02540 acyl-CoA synthetase	K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D      NKI27_18860 3-(methylthio)propionyl-CoA ligase	K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D      NKI27_04910 acyl-CoA dehydrogenase C-terminal domain-containing protein	K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D      NKI27_04915 acyl-CoA dehydrogenase C-terminal domain-containing protein	K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D      NKI27_18245 acyl-CoA dehydrogenase C-terminal domain-containing protein	K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B  09103 Lipid metabolism
C    00061 Fatty acid biosynthesis [PATH:alkm00061]
D      NKI27_06290 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      NKI27_02920 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      NKI27_02915 accC; acetyl-CoA carboxylase biotin carboxylase subunit	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      NKI27_09020 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      NKI27_11440 acpP; acyl carrier protein	K02078 acpP; acyl carrier protein
D      NKI27_13445 acyl carrier protein	K02078 acpP; acyl carrier protein
D      NKI27_11450 fabD; ACP S-malonyltransferase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      NKI27_13460 beta-ketoacyl-ACP synthase I	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      NKI27_11435 fabF; beta-ketoacyl-ACP synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      NKI27_06670 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_11445 fabG; 3-oxoacyl-ACP reductase FabG	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_13295 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_13465 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D      NKI27_13510 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      NKI27_09105 enoyl-ACP reductase	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      NKI27_13455 trans-2-enoyl-CoA reductase family protein	K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D      NKI27_08800 AMP-binding protein	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C    00062 Fatty acid elongation
C    00071 Fatty acid degradation [PATH:alkm00071]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_08375 fadA; acetyl-CoA C-acyltransferase FadA	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      NKI27_08370 fadB; fatty acid oxidation complex subunit alpha FadB	K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D      NKI27_12605 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      NKI27_02985 acyl-CoA dehydrogenase family protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      NKI27_03015 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      NKI27_06560 acyl-CoA dehydrogenase family protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      NKI27_05255 acyl-CoA dehydrogenase family protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      NKI27_04660 acyl-CoA dehydrogenase family protein	K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D      NKI27_00860 acyl-CoA dehydrogenase	K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D      NKI27_10925 acyl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      NKI27_08800 AMP-binding protein	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      NKI27_00220 alkane 1-monooxygenase	K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D      NKI27_00235 FAD-dependent oxidoreductase	K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D      NKI27_16700 FAD-dependent oxidoreductase	K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D      NKI27_10660 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C    00073 Cutin, suberine and wax biosynthesis
C    00100 Steroid biosynthesis
C    00120 Primary bile acid biosynthesis
C    00121 Secondary bile acid biosynthesis
C    00140 Steroid hormone biosynthesis
C    00561 Glycerolipid metabolism [PATH:alkm00561]
D      NKI27_14465 glpK; glycerol kinase GlpK	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      NKI27_05170 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB	K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D      NKI27_11455 plsX; phosphate acyltransferase PlsX	K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D      NKI27_17820 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      NKI27_01900 1-acylglycerol-3-phosphate O-acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      NKI27_03765 wax ester/triacylglycerol synthase family O-acyltransferase	K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D      NKI27_10385 triacylglycerol lipase	K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D      NKI27_15035 triacylglycerol lipase	K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D      NKI27_18650 alpha/beta fold hydrolase	K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C    00564 Glycerophospholipid metabolism [PATH:alkm00564]
D      NKI27_10145 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D      NKI27_06635 glycerol-3-phosphate dehydrogenase/oxidase	K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D      NKI27_14475 glpD; glycerol-3-phosphate dehydrogenase	K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D      NKI27_05170 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB	K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D      NKI27_17820 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      NKI27_01900 1-acylglycerol-3-phosphate O-acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      NKI27_18905 phospholipase A	K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D      NKI27_11645 glycerophosphodiester phosphodiesterase	K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D      NKI27_13540 phosphatidate cytidylyltransferase	K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D      NKI27_16205 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase	K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D      NKI27_04310 asd; archaetidylserine decarboxylase	K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D      NKI27_09260 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D      NKI27_16380 phosphatidylglycerophosphatase A	K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D      NKI27_01635 cls; cardiolipin synthase	K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D      NKI27_01030 phospholipase D family protein	K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D      NKI27_13110 CDP-alcohol phosphatidyltransferase family protein	K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C    00565 Ether lipid metabolism [PATH:alkm00565]
D      NKI27_06630 FAD-binding oxidoreductase	K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D      NKI27_18905 phospholipase A	K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C    00600 Sphingolipid metabolism [PATH:alkm00600]
D      NKI27_03510 neutral/alkaline ceramidase	K12349 ASAH2; neutral ceramidase [EC:3.5.1.23]
C    00590 Arachidonic acid metabolism
D      NKI27_18905 phospholipase A	K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C    00591 Linoleic acid metabolism
D      NKI27_18905 phospholipase A	K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C    00592 alpha-Linolenic acid metabolism [PATH:alkm00592]
D      NKI27_18905 phospholipase A	K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D      NKI27_08375 fadA; acetyl-CoA C-acyltransferase FadA	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    01040 Biosynthesis of unsaturated fatty acids [PATH:alkm01040]
D      NKI27_00130 fatty acid desaturase	K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D      NKI27_08545 acyl-CoA desaturase	K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D      NKI27_00965 acyl-CoA desaturase	K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D      NKI27_03260 fatty acid desaturase	K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D      NKI27_12300 arylesterase	K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D      NKI27_16685 acyl-CoA thioesterase II	K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D      NKI27_16870 acyl-CoA thioesterase	K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B  09104 Nucleotide metabolism
C    00230 Purine metabolism [PATH:alkm00230]
D      NKI27_17080 nudF; ADP-ribose diphosphatase	K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D      NKI27_18495 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NKI27_16940 phosphomannomutase/phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      NKI27_04175 ribose-phosphate diphosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      NKI27_10455 ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      NKI27_13870 ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      NKI27_09040 purF; amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D      NKI27_02885 purD; phosphoribosylamine--glycine ligase	K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D      NKI27_13125 purN; phosphoribosylglycinamide formyltransferase	K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D      NKI27_12550 purT; formate-dependent phosphoribosylglycinamide formyltransferase	K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D      NKI27_12575 purL; phosphoribosylformylglycinamidine synthase	K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D      NKI27_13120 purM; phosphoribosylformylglycinamidine cyclo-ligase	K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D      NKI27_06725 5-(carboxyamino)imidazole ribonucleotide synthase	K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D      NKI27_06730 purE; 5-(carboxyamino)imidazole ribonucleotide mutase	K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D      NKI27_07705 phosphoribosylaminoimidazolesuccinocarboxamide synthase	K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D      NKI27_09415 purB; adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      NKI27_02890 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D      NKI27_15180 adenine phosphoribosyltransferase	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      NKI27_02050 yrfG; GMP/IMP nucleotidase	K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D      NKI27_18380 pyrimidine/purine nucleoside phosphorylase	K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D      NKI27_16230 pgeF; peptidoglycan editing factor PgeF	K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D      NKI27_07550 guaB; IMP dehydrogenase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      NKI27_08240 ndk; nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      NKI27_18155 XTP/dITP diphosphatase	K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D      NKI27_07555 guaA; glutamine-hydrolyzing GMP synthase	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      NKI27_18175 nucleoside deaminase	K01487 guaD; guanine deaminase [EC:3.5.4.3]
D      NKI27_17970 gmk; guanylate kinase	K00942 gmk; guanylate kinase [EC:2.7.4.8]
D      NKI27_00485 ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      NKI27_07950 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      NKI27_00490 ribonucleotide-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      NKI27_17960 RelA/SpoT family protein	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D      NKI27_01405 ppx; exopolyphosphatase	K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D      NKI27_05095 relA; GTP diphosphokinase	K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D      NKI27_08070 adenylate/guanylate cyclase domain-containing protein	K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D      NKI27_01540 class I adenylate cyclase	K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D      NKI27_04405 adenylosuccinate synthase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      NKI27_02290 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN	K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D      NKI27_05145 adk; adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      NKI27_05100 mazG; nucleoside triphosphate pyrophosphohydrolase	K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D      NKI27_17070 cpdA; 3',5'-cyclic-AMP phosphodiesterase	K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D      NKI27_02700 symmetrical bis(5'-nucleosyl)-tetraphosphatase	K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D      NKI27_05050 cysN; sulfate adenylyltransferase subunit CysN	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      NKI27_05055 cysD; sulfate adenylyltransferase subunit CysD	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      NKI27_02855 ureC; urease subunit alpha	K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D      NKI27_02850 urease subunit beta	K01429 ureB; urease subunit beta [EC:3.5.1.5]
D      NKI27_02845 ureA; urease subunit gamma	K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C    00240 Pyrimidine metabolism [PATH:alkm00240]
D      NKI27_03580 carB; carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      NKI27_03575 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      NKI27_01990 aspartate carbamoyltransferase catalytic subunit	K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D      NKI27_01995 dihydroorotase	K01465 URA4; dihydroorotase [EC:3.5.2.3]
D      NKI27_12475 pyrC; dihydroorotase	K01465 URA4; dihydroorotase [EC:3.5.2.3]
D      NKI27_12350 quinone-dependent dihydroorotate dehydrogenase	K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D      NKI27_18070 pyrE; orotate phosphoribosyltransferase	K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D      NKI27_12380 pyrF; orotidine-5'-phosphate decarboxylase	K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D      NKI27_13555 pyrH; UMP kinase	K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D      NKI27_08240 ndk; nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      NKI27_05100 mazG; nucleoside triphosphate pyrophosphohydrolase	K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D      NKI27_14240 Maf-like protein	K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D      NKI27_09370 M48 family metallopeptidase	K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D      NKI27_06300 CTP synthase	K01937 pyrG; CTP synthase [EC:6.3.4.2]
D      NKI27_12405 cmk; (d)CMP kinase	K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D      NKI27_18380 pyrimidine/purine nucleoside phosphorylase	K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D      NKI27_04680 upp; uracil phosphoribosyltransferase	K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D      NKI27_01985 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D      NKI27_02290 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN	K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D      NKI27_06470 dcd; dCTP deaminase	K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D      NKI27_00485 ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      NKI27_07950 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      NKI27_00490 ribonucleotide-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      NKI27_11420 tmk; dTMP kinase	K00943 tmk; dTMP kinase [EC:2.7.4.9]
D      NKI27_16945 dut; dUTP diphosphatase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      NKI27_10460 thymidine phosphorylase family protein	K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D      NKI27_13865 thymidine phosphorylase family protein	K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D      NKI27_15920 thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B  09105 Amino acid metabolism
C    00250 Alanine, aspartate and glutamate metabolism [PATH:alkm00250]
D      NKI27_12370 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      NKI27_14340 nadB; L-aspartate oxidase	K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D      NKI27_11095 pyridoxal phosphate-dependent aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      NKI27_02365 ald; alanine dehydrogenase	K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D      NKI27_12465 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      NKI27_01530 argH; argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      NKI27_04405 adenylosuccinate synthase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      NKI27_09415 purB; adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      NKI27_01990 aspartate carbamoyltransferase catalytic subunit	K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D      NKI27_16455 gltB; glutamate synthase large subunit	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      NKI27_16450 FAD-dependent oxidoreductase	K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D      NKI27_07525 NAD-glutamate dehydrogenase	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      NKI27_02200 gdhA; NADP-specific glutamate dehydrogenase	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      NKI27_11865 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D      NKI27_02390 glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_13225 glutamine synthetase III	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_17200 glnA; glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_03580 carB; carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      NKI27_03575 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      NKI27_00095 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      NKI27_09040 purF; amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C    00260 Glycine, serine and threonine metabolism [PATH:alkm00260]
D      NKI27_12970 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      NKI27_17330 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      NKI27_08990 asd; aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      NKI27_14390 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      NKI27_18095 homoserine kinase	K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D      NKI27_08860 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH	K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D      NKI27_14385 thrC; threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      NKI27_14710 ltaE; low-specificity L-threonine aldolase	K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D      NKI27_16420 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      NKI27_04600 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      NKI27_03845 glyoxylate/hydroxypyruvate reductase A	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      NKI27_15255 serA; phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      NKI27_12425 serC; 3-phosphoserine/phosphohydroxythreonine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      NKI27_18490 phosphoserine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      NKI27_04280 serB; phosphoserine phosphatase SerB	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D      NKI27_17050 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA	K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D      NKI27_17045 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB	K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D      NKI27_17060 gcvT; glycine cleavage system aminomethyltransferase GcvT	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_17055 gcvH; glycine cleavage system protein GcvH	K02437 gcvH; glycine cleavage system H protein
D      NKI27_16205 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase	K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D      NKI27_01785 L-serine ammonia-lyase	K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D      NKI27_03070 ilvA; threonine ammonia-lyase, biosynthetic	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      NKI27_02435 aspartate/glutamate racemase family protein	K25316 racX; amino-acid racemase [EC:5.1.1.10]
D      NKI27_09015 trpA; tryptophan synthase subunit alpha	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      NKI27_09010 trpB; tryptophan synthase subunit beta	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      NKI27_17315 ectB; diaminobutyrate--2-oxoglutarate transaminase	K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D      NKI27_17310 ectA; diaminobutyrate acetyltransferase	K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D      NKI27_17325 ectoine synthase	K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C    00270 Cysteine and methionine metabolism [PATH:alkm00270]
D      NKI27_08225 cysE; serine O-acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      NKI27_08730 cysK; cysteine synthase A	K01738 cysK; cysteine synthase [EC:2.5.1.47]
D      NKI27_09190 metH; methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      NKI27_00475 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D      NKI27_15340 metK; methionine adenosyltransferase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      NKI27_16895 speD; adenosylmethionine decarboxylase	K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D      NKI27_18200 speE; polyamine aminopropyltransferase	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      NKI27_16230 pgeF; peptidoglycan editing factor PgeF	K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D      NKI27_12630 TRZ/ATZ family hydrolase	K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D      NKI27_11710 S-methyl-5'-thioinosine phosphorylase	K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D      NKI27_12625 mtnA; S-methyl-5-thioribose-1-phosphate isomerase	K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D      NKI27_06150 methylthioribulose 1-phosphate dehydratase	K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D      NKI27_06160 mtnC; acireductone synthase	K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D      NKI27_06155 acireductone dioxygenase	K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D      NKI27_15345 ahcY; adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      NKI27_12970 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      NKI27_17330 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      NKI27_08990 asd; aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      NKI27_14390 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      NKI27_18140 homoserine O-acetyltransferase	K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D      NKI27_16440 bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D      NKI27_09045 O-succinylhomoserine sulfhydrylase	K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D      NKI27_01865 gshA; glutamate--cysteine ligase	K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D      NKI27_01965 gshB; glutathione synthase	K01920 gshB; glutathione synthase [EC:6.3.2.3]
D      NKI27_12370 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      NKI27_04315 rhodanese-like domain-containing protein	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      NKI27_02435 aspartate/glutamate racemase family protein	K25316 racX; amino-acid racemase [EC:5.1.1.10]
D      NKI27_06795 pyridoxal-phosphate dependent enzyme	K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D      NKI27_01785 L-serine ammonia-lyase	K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D      NKI27_05085 cysM; cysteine synthase CysM	K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D      NKI27_03845 glyoxylate/hydroxypyruvate reductase A	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      NKI27_15255 serA; phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      NKI27_12425 serC; 3-phosphoserine/phosphohydroxythreonine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      NKI27_18490 phosphoserine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C    00280 Valine, leucine and isoleucine degradation [PATH:alkm00280]
D      NKI27_01660 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D      NKI27_01655 alpha-ketoacid dehydrogenase subunit beta	K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D      NKI27_01650 2-oxo acid dehydrogenase subunit E2	K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_02985 acyl-CoA dehydrogenase family protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      NKI27_03015 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      NKI27_06560 acyl-CoA dehydrogenase family protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      NKI27_05255 acyl-CoA dehydrogenase family protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      NKI27_10215 isovaleryl-CoA dehydrogenase	K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D      NKI27_08370 fadB; fatty acid oxidation complex subunit alpha FadB	K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D      NKI27_12605 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      NKI27_08375 fadA; acetyl-CoA C-acyltransferase FadA	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      NKI27_11410 mce; methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      NKI27_02245 mmsB; 3-hydroxyisobutyrate dehydrogenase	K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D      NKI27_02265 CoA-acylating methylmalonate-semialdehyde dehydrogenase	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      NKI27_10200 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D      NKI27_10210 methylcrotonoyl-CoA carboxylase	K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D      NKI27_10195 hydroxymethylglutaryl-CoA lyase	K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D      NKI27_10190 acetoacetate--CoA ligase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C    00290 Valine, leucine and isoleucine biosynthesis [PATH:alkm00290]
D      NKI27_03070 ilvA; threonine ammonia-lyase, biosynthetic	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      NKI27_08975 leuC; 3-isopropylmalate dehydratase large subunit	K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D      NKI27_08980 leuD; 3-isopropylmalate dehydratase small subunit	K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D      NKI27_08985 leuB; 3-isopropylmalate dehydrogenase	K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D      NKI27_03500 acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_16215 acetolactate synthase 3 large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_18890 ilvG; acetolactate synthase 2 catalytic subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_16210 ilvN; acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      NKI27_16740 ilvC; ketol-acid reductoisomerase	K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D      NKI27_15905 ilvD; dihydroxy-acid dehydratase	K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D      NKI27_06490 valine--pyruvate transaminase	K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D      NKI27_11095 pyridoxal phosphate-dependent aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      NKI27_16180 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D      NKI27_18750 leuA; 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C    00300 Lysine biosynthesis [PATH:alkm00300]
D      NKI27_14390 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      NKI27_12970 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      NKI27_17330 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      NKI27_08990 asd; aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      NKI27_07695 dapA; 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      NKI27_03570 dapB; 4-hydroxy-tetrahydrodipicolinate reductase	K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D      NKI27_13590 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D      NKI27_04455 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      NKI27_14450 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      NKI27_13580 dapC; succinyldiaminopimelate transaminase	K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D      NKI27_13595 dapE; succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      NKI27_01555 dapF; diaminopimelate epimerase	K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D      NKI27_01550 lysA; diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      NKI27_14545 PLP-dependent aminotransferase family protein	K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D      NKI27_16065 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      NKI27_16060 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C    00310 Lysine degradation [PATH:alkm00310]
D      NKI27_08420 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_10925 acyl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      NKI27_08370 fadB; fatty acid oxidation complex subunit alpha FadB	K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D      NKI27_12605 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_02435 aspartate/glutamate racemase family protein	K25316 racX; amino-acid racemase [EC:5.1.1.10]
D      NKI27_15820 dat; D-amino-acid transaminase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C    00220 Arginine biosynthesis [PATH:alkm00220]
D      NKI27_14455 argF; ornithine carbamoyltransferase	K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D      NKI27_12465 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      NKI27_01530 argH; argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      NKI27_02855 ureC; urease subunit alpha	K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D      NKI27_02850 urease subunit beta	K01429 ureB; urease subunit beta [EC:3.5.1.5]
D      NKI27_02845 ureA; urease subunit gamma	K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D      NKI27_02390 glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_13225 glutamine synthetase III	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_17200 glnA; glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_03580 carB; carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      NKI27_03575 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      NKI27_07525 NAD-glutamate dehydrogenase	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      NKI27_02200 gdhA; NADP-specific glutamate dehydrogenase	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      NKI27_12370 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      NKI27_11095 pyridoxal phosphate-dependent aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      NKI27_16915 argA; amino-acid N-acetyltransferase	K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D      NKI27_15990 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D      NKI27_16935 argB; acetylglutamate kinase	K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D      NKI27_17695 argC; N-acetyl-gamma-glutamyl-phosphate reductase	K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D      NKI27_04455 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      NKI27_14450 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      NKI27_16920 argE; acetylornithine deacetylase	K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C    00330 Arginine and proline metabolism [PATH:alkm00330]
D      NKI27_18205 speA; biosynthetic arginine decarboxylase	K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D      NKI27_09480 carbon-nitrogen hydrolase	K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D      NKI27_18200 speE; polyamine aminopropyltransferase	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      NKI27_16895 speD; adenosylmethionine decarboxylase	K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D      NKI27_18785 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      NKI27_04460 aruF; arginine/ornithine succinyltransferase subunit alpha	K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D      NKI27_04465 astA; arginine N-succinyltransferase	K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D      NKI27_11910 astA; arginine N-succinyltransferase	K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D      NKI27_04475 astB; N-succinylarginine dihydrolase	K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D      NKI27_04470 astD; succinylglutamate-semialdehyde dehydrogenase	K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D      NKI27_18125 proC; pyrroline-5-carboxylate reductase	K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D      NKI27_11865 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D      NKI27_16340 proB; glutamate 5-kinase	K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D      NKI27_15865 glutamate-5-semialdehyde dehydrogenase	K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D      NKI27_17190 pip; prolyl aminopeptidase	K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D      NKI27_12370 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      NKI27_15820 dat; D-amino-acid transaminase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C    00340 Histidine metabolism [PATH:alkm00340]
D      NKI27_14125 hisG; ATP phosphoribosyltransferase	K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D      NKI27_04400 ATP phosphoribosyltransferase regulatory subunit	K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D      NKI27_03145 phosphoribosyl-ATP diphosphatase	K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D      NKI27_03150 hisI; phosphoribosyl-AMP cyclohydrolase	K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D      NKI27_04570 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase	K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D      NKI27_04565 hisH; imidazole glycerol phosphate synthase subunit HisH	K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D      NKI27_04575 hisF; imidazole glycerol phosphate synthase subunit HisF	K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D      NKI27_04560 hisB; imidazoleglycerol-phosphate dehydratase HisB	K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D      NKI27_07245 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      NKI27_12415 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      NKI27_14120 hisD; histidinol dehydrogenase	K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C    00350 Tyrosine metabolism [PATH:alkm00350]
D      NKI27_12370 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      NKI27_07245 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      NKI27_12415 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      NKI27_10660 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C    00360 Phenylalanine metabolism [PATH:alkm00360]
D      NKI27_12370 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      NKI27_07245 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      NKI27_12415 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      NKI27_15820 dat; D-amino-acid transaminase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      NKI27_18785 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C    00380 Tryptophan metabolism [PATH:alkm00380]
D      NKI27_08420 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_10925 acyl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      NKI27_08370 fadB; fatty acid oxidation complex subunit alpha FadB	K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D      NKI27_12605 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_18785 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C    00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:alkm00400]
D      NKI27_02780 3-deoxy-7-phosphoheptulonate synthase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      NKI27_09080 3-deoxy-7-phosphoheptulonate synthase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      NKI27_14675 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      NKI27_16465 aroB; 3-dehydroquinate synthase	K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D      NKI27_02925 aroQ; type II 3-dehydroquinate dehydratase	K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D      NKI27_19075 aroE; shikimate dehydrogenase	K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D      NKI27_16470 aroK; shikimate kinase AroK	K00891 aroK; shikimate kinase [EC:2.7.1.71]
D      NKI27_12410 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase	K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D      NKI27_08950 aroC; chorismate synthase	K01736 aroC; chorismate synthase [EC:4.2.3.5]
D      NKI27_02650 trpE; anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      NKI27_02645 aminodeoxychorismate/anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      NKI27_02640 trpD; anthranilate phosphoribosyltransferase	K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D      NKI27_09005 phosphoribosylanthranilate isomerase	K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D      NKI27_02635 trpC; indole-3-glycerol phosphate synthase TrpC	K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D      NKI27_09015 trpA; tryptophan synthase subunit alpha	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      NKI27_09010 trpB; tryptophan synthase subunit beta	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      NKI27_12420 pheA; prephenate dehydratase	K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D      NKI27_02760 prephenate dehydratase	K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D      NKI27_12370 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      NKI27_07245 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      NKI27_12415 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B  09106 Metabolism of other amino acids
C    00410 beta-Alanine metabolism [PATH:alkm00410]
D      NKI27_17800 panC; pantoate--beta-alanine ligase	K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D      NKI27_08370 fadB; fatty acid oxidation complex subunit alpha FadB	K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D      NKI27_12605 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      NKI27_02265 CoA-acylating methylmalonate-semialdehyde dehydrogenase	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C    00430 Taurine and hypotaurine metabolism [PATH:alkm00430]
D      NKI27_03945 ggt; gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      NKI27_02365 ald; alanine dehydrogenase	K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D      NKI27_07525 NAD-glutamate dehydrogenase	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      NKI27_08285 pta; phosphate acetyltransferase	K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      NKI27_08290 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
C    00440 Phosphonate and phosphinate metabolism [PATH:alkm00440]
D      NKI27_00415 carbon-phosphorus lyase complex subunit PhnI	K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D      NKI27_00405 phnG; phosphonate C-P lyase system protein PhnG	K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D      NKI27_00430 phnL; phosphonate C-P lyase system protein PhnL	K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D      NKI27_00435 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase	K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D      NKI27_00420 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ	K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D      NKI27_00445 phnP; phosphonate metabolism protein PhnP	K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C    00450 Selenocompound metabolism [PATH:alkm00450]
D      NKI27_09190 metH; methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      NKI27_00475 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D      NKI27_15455 cysteine desulfurase	K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D      NKI27_09470 trxB; thioredoxin-disulfide reductase	K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D      NKI27_05050 cysN; sulfate adenylyltransferase subunit CysN	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      NKI27_05055 cysD; sulfate adenylyltransferase subunit CysD	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      NKI27_12095 selD; selenide, water dikinase SelD	K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D      NKI27_06425 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C    00460 Cyanoamino acid metabolism [PATH:alkm00460]
D      NKI27_03945 ggt; gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      NKI27_16420 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      NKI27_03280 acetamidase/formamidase family protein	K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C    00470 D-Amino acid metabolism [PATH:alkm00470]
D      NKI27_03885 alr; alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      NKI27_15820 dat; D-amino-acid transaminase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      NKI27_16030 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      NKI27_02435 aspartate/glutamate racemase family protein	K25316 racX; amino-acid racemase [EC:5.1.1.10]
D      NKI27_05190 murI; glutamate racemase	K01776 murI; glutamate racemase [EC:5.1.1.3]
D      NKI27_16050 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      NKI27_06795 pyridoxal-phosphate dependent enzyme	K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D      NKI27_01555 dapF; diaminopimelate epimerase	K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D      NKI27_01550 lysA; diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C    00480 Glutathione metabolism [PATH:alkm00480]
D      NKI27_03945 ggt; gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      NKI27_01865 gshA; glutamate--cysteine ligase	K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D      NKI27_01965 gshB; glutathione synthase	K01920 gshB; glutathione synthase [EC:6.3.2.3]
D      NKI27_13005 leucyl aminopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      NKI27_06830 pepN; aminopeptidase N	K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D      NKI27_18885 aminoacyl-histidine dipeptidase	K01270 pepD; dipeptidase D [EC:3.4.13.-]
D      NKI27_04995 glutathione S-transferase family protein	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      NKI27_07220 glutathione S-transferase family protein	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      NKI27_10910 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      NKI27_10285 gorA; glutathione-disulfide reductase	K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D      NKI27_15655 NADP-dependent isocitrate dehydrogenase	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      NKI27_10710 zwf; glucose-6-phosphate dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      NKI27_11070 glutathione peroxidase	K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D      NKI27_02790 glutathione peroxidase	K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D      NKI27_00260 peroxiredoxin	K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D      NKI27_18200 speE; polyamine aminopropyltransferase	K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B  09107 Glycan biosynthesis and metabolism
C    00510 N-Glycan biosynthesis
C    00513 Various types of N-glycan biosynthesis
C    00512 Mucin type O-glycan biosynthesis
C    00515 Mannose type O-glycan biosynthesis
C    00514 Other types of O-glycan biosynthesis
C    00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C    00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C    00533 Glycosaminoglycan biosynthesis - keratan sulfate
C    00531 Glycosaminoglycan degradation
C    00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C    00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C    00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C    00604 Glycosphingolipid biosynthesis - ganglio series
C    00511 Other glycan degradation
C    00540 Lipopolysaccharide biosynthesis [PATH:alkm00540]
D      NKI27_13505 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D      NKI27_15790 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase	K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D      NKI27_16010 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase	K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D      NKI27_13515 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D      NKI27_11340 UDP-2,3-diacylglucosamine diphosphatase	K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D      NKI27_13500 lpxB; lipid-A-disaccharide synthase	K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D      NKI27_09535 lpxK; tetraacyldisaccharide 4'-kinase	K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D      NKI27_14170 KpsF/GutQ family sugar-phosphate isomerase	K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D      NKI27_06305 kdsA; 3-deoxy-8-phosphooctulonate synthase	K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D      NKI27_09545 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase	K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D      NKI27_17095 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D      NKI27_16110 SIS domain-containing protein	K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
C    00542 O-Antigen repeat unit biosynthesis
C    00541 O-Antigen nucleotide sugar biosynthesis [PATH:alkm00541]
D      NKI27_07940 galU; UTP--glucose-1-phosphate uridylyltransferase GalU	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      NKI27_07565 galE; UDP-glucose 4-epimerase GalE	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      NKI27_07570 UDP-glucose/GDP-mannose dehydrogenase family protein	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      NKI27_07715 NAD-dependent epimerase	K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D      NKI27_13835 rfbA; glucose-1-phosphate thymidylyltransferase RfbA	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      NKI27_13840 rfbB; dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D      NKI27_13830 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase	K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D      NKI27_13825 rfbD; dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D      NKI27_13720 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase	K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D      NKI27_01495 2Fe-2S iron-sulfur cluster-binding protein	K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D      NKI27_00740 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      NKI27_13665 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      NKI27_00735 phosphomannomutase	K01840 manB; phosphomannomutase [EC:5.4.2.8]
D      NKI27_00090 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D      NKI27_13690 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D      NKI27_13700 polysaccharide biosynthesis protein	K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D      NKI27_13695 SDR family oxidoreductase	K24252 wbvR; UDP-6-deoxy-4-keto-L-IdoNAc 3-epimerase / UDP-4-keto-L-RhaNAc 4-reductase [EC:1.1.1.-]
D      NKI27_13670 polysaccharide biosynthesis protein	K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D      NKI27_13680 SDR family oxidoreductase	K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D      NKI27_09565 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D      NKI27_13880 Gfo/Idh/MocA family oxidoreductase	K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D      NKI27_13890 DegT/DnrJ/EryC1/StrS family aminotransferase	K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D      NKI27_13885 N-acetyltransferase	K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D      NKI27_13895 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D      NKI27_13845 NAD-dependent epimerase/dehydratase family protein	K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C    00550 Peptidoglycan biosynthesis [PATH:alkm00550]
D      NKI27_14130 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      NKI27_09555 murB; UDP-N-acetylmuramate dehydrogenase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      NKI27_16035 murC; UDP-N-acetylmuramate--L-alanine ligase	K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D      NKI27_16050 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      NKI27_16065 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      NKI27_16030 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      NKI27_16060 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D      NKI27_13545 uppS; polyprenyl diphosphate synthase	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D      NKI27_05155 undecaprenyl-diphosphate phosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      NKI27_16055 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      NKI27_16040 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D      NKI27_16505 penicillin-binding protein 1A	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      NKI27_17730 mrcB; penicillin-binding protein 1B	K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D      NKI27_15845 mrdA; penicillin-binding protein 2	K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D      NKI27_16070 penicillin-binding transpeptidase domain-containing protein	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      NKI27_15825 D-alanyl-D-alanine carboxypeptidase	K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C    00552 Teichoic acid biosynthesis [PATH:alkm00552]
D      NKI27_05155 undecaprenyl-diphosphate phosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      NKI27_13670 polysaccharide biosynthesis protein	K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C    00571 Lipoarabinomannan (LAM) biosynthesis
C    00572 Arabinogalactan biosynthesis - Mycobacterium
C    00543 Exopolysaccharide biosynthesis [PATH:alkm00543]
D      NKI27_00785 glycosyltransferase family 2 protein	K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D      NKI27_00780 alginate biosynthesis protein Alg44	K19291 alg44; mannuronan synthase [EC:2.4.1.33]
D      NKI27_00765 MBOAT family protein	K19294 algI; alginate O-acetyltransferase complex protein AlgI
D      NKI27_00760 alginate O-acetyltransferase	K19295 algJ; alginate O-acetyltransferase complex protein AlgJ
D      NKI27_08225 cysE; serine O-acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B  09108 Metabolism of cofactors and vitamins
C    00730 Thiamine metabolism [PATH:alkm00730]
D      NKI27_17085 thiC; phosphomethylpyrimidine synthase ThiC	K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D      NKI27_03420 cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      NKI27_08235 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      NKI27_02295 thiI; tRNA 4-thiouridine(8) synthase ThiI	K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D      NKI27_16260 thiO; glycine oxidase ThiO	K03153 thiO; glycine oxidase [EC:1.4.3.19]
D      NKI27_15965 dxs; 1-deoxy-D-xylulose-5-phosphate synthase	K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D      NKI27_02715 thiazole synthase	K03149 thiG; thiazole synthase [EC:2.8.1.10]
D      NKI27_17715 thiE; thiamine phosphate synthase	K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D      NKI27_16385 thiL; thiamine-phosphate kinase	K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D      NKI27_04335 rsgA; small ribosomal subunit biogenesis GTPase RsgA	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D      NKI27_13205 alkaline phosphatase	K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D      NKI27_05145 adk; adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
C    00740 Riboflavin metabolism [PATH:alkm00740]
D      NKI27_15970 ribA; GTP cyclohydrolase II	K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D      NKI27_16400 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D      NKI27_16410 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D      NKI27_01565 HAD family hydrolase	K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D      NKI27_16395 ribE; 6,7-dimethyl-8-ribityllumazine synthase	K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D      NKI27_11755 riboflavin synthase subunit alpha	K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D      NKI27_16405 riboflavin synthase	K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D      NKI27_16325 ribF; bifunctional riboflavin kinase/FAD synthetase	K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D      NKI27_12100 bluB; 5,6-dimethylbenzimidazole synthase	K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D      NKI27_17080 nudF; ADP-ribose diphosphatase	K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D      NKI27_04655 UbiX family flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C    00750 Vitamin B6 metabolism [PATH:alkm00750]
D      NKI27_15300 gap; type I glyceraldehyde-3-phosphate dehydrogenase	K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D      NKI27_11120 pdxB; 4-phosphoerythronate dehydrogenase PdxB	K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D      NKI27_12425 serC; 3-phosphoserine/phosphohydroxythreonine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      NKI27_18490 phosphoserine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      NKI27_02690 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA	K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D      NKI27_14275 pdxJ; pyridoxine 5'-phosphate synthase	K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D      NKI27_14385 thrC; threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
C    00760 Nicotinate and nicotinamide metabolism [PATH:alkm00760]
D      NKI27_14340 nadB; L-aspartate oxidase	K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D      NKI27_07660 nadA; quinolinate synthase NadA	K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D      NKI27_13080 nadC; carboxylating nicotinate-nucleotide diphosphorylase	K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D      NKI27_15860 nadD; nicotinate-nucleotide adenylyltransferase	K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D      NKI27_05100 mazG; nucleoside triphosphate pyrophosphohydrolase	K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D      NKI27_16245 NAD+ synthase	K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D      NKI27_06805 NAD(+) kinase	K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D      NKI27_11650 sthA; Si-specific NAD(P)(+) transhydrogenase	K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
C    00770 Pantothenate and CoA biosynthesis [PATH:alkm00770]
D      NKI27_03500 acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_16215 acetolactate synthase 3 large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_18890 ilvG; acetolactate synthase 2 catalytic subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      NKI27_16210 ilvN; acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      NKI27_16740 ilvC; ketol-acid reductoisomerase	K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D      NKI27_15905 ilvD; dihydroxy-acid dehydratase	K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D      NKI27_17795 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase	K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D      NKI27_17800 panC; pantoate--beta-alanine ligase	K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D      NKI27_16950 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D      NKI27_05100 mazG; nucleoside triphosphate pyrophosphohydrolase	K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D      NKI27_16540 coaD; pantetheine-phosphate adenylyltransferase	K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D      NKI27_14005 coaE; dephospho-CoA kinase	K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D      NKI27_05075 acpS; holo-ACP synthase	K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D      NKI27_16645 panP; putative pyridoxal-dependent aspartate 1-decarboxylase	K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
C    00780 Biotin metabolism [PATH:alkm00780]
D      NKI27_04890 bioC; malonyl-ACP O-methyltransferase BioC	K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D      NKI27_13460 beta-ketoacyl-ACP synthase I	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      NKI27_11435 fabF; beta-ketoacyl-ACP synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      NKI27_06670 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_11445 fabG; 3-oxoacyl-ACP reductase FabG	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_13295 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_13510 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      NKI27_09105 enoyl-ACP reductase	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      NKI27_04880 bioF; 8-amino-7-oxononanoate synthase	K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D      NKI27_04895 bioD; dethiobiotin synthase	K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D      NKI27_04875 bioB; biotin synthase BioB	K01012 bioB; biotin synthase [EC:2.8.1.6]
D      NKI27_17615 biotin--[acetyl-CoA-carboxylase] ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C    00785 Lipoic acid metabolism [PATH:alkm00785]
D      NKI27_15810 lipB; lipoyl(octanoyl) transferase LipB	K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D      NKI27_15805 lipA; lipoyl synthase	K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_03735 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      NKI27_03740 aceF; dihydrolipoyllysine-residue acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      NKI27_08415 2-oxoglutarate dehydrogenase E1 component	K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D      NKI27_08420 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      NKI27_01660 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D      NKI27_01655 alpha-ketoacid dehydrogenase subunit beta	K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D      NKI27_01650 2-oxo acid dehydrogenase subunit E2	K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D      NKI27_17050 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA	K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D      NKI27_17045 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB	K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D      NKI27_17060 gcvT; glycine cleavage system aminomethyltransferase GcvT	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      NKI27_17055 gcvH; glycine cleavage system protein GcvH	K02437 gcvH; glycine cleavage system H protein
C    00790 Folate biosynthesis [PATH:alkm00790]
D      NKI27_01350 folE; GTP cyclohydrolase I FolE	K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D      NKI27_13205 alkaline phosphatase	K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D      NKI27_17815 folB; dihydroneopterin aldolase	K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D      NKI27_17790 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D      NKI27_17810 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D      NKI27_03605 folP; dihydropteroate synthase	K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D      NKI27_15910 dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      NKI27_09025 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase	K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D      NKI27_15970 ribA; GTP cyclohydrolase II	K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D      NKI27_16400 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D      NKI27_08865 pabB; aminodeoxychorismate synthase component I	K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D      NKI27_01345 folX; dihydroneopterin triphosphate 2'-epimerase	K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D      NKI27_12445 4a-hydroxytetrahydrobiopterin dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      NKI27_04630 pteridine reductase	K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D      NKI27_18925 queE; 7-carboxy-7-deazaguanine synthase	K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D      NKI27_18930 queC; 7-cyano-7-deazaguanine synthase QueC	K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D      NKI27_08065 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D      NKI27_15975 moaA; GTP 3',8-cyclase MoaA	K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D      NKI27_15980 moaC; cyclic pyranopterin monophosphate synthase MoaC	K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D      NKI27_01460 moaE; molybdopterin synthase catalytic subunit MoaE	K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D      NKI27_01475 moaB; molybdenum cofactor biosynthesis protein B	K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D      NKI27_01470 molybdopterin molybdotransferase MoeA	K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C    00670 One carbon pool by folate [PATH:alkm00670]
D      NKI27_15910 dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      NKI27_11320 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      NKI27_16420 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      NKI27_13125 purN; phosphoribosylglycinamide formyltransferase	K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D      NKI27_02890 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D      NKI27_19105 fmt; methionyl-tRNA formyltransferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      NKI27_17060 gcvT; glycine cleavage system aminomethyltransferase GcvT	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      NKI27_09190 metH; methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      NKI27_15920 thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D      NKI27_12440 purU; formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      NKI27_15350 metF; methylenetetrahydrofolate reductase [NAD(P)H]	K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D      NKI27_03080 5-formyltetrahydrofolate cyclo-ligase	K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C    00830 Retinol metabolism
C    00860 Porphyrin metabolism [PATH:alkm00860]
D      NKI27_11605 gltX; glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      NKI27_04200 hemA; glutamyl-tRNA reductase	K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D      NKI27_17720 hemL; glutamate-1-semialdehyde 2,1-aminomutase	K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D      NKI27_16580 hemB; porphobilinogen synthase	K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D      NKI27_01515 hemC; hydroxymethylbilane synthase	K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D      NKI27_16445 hemE; uroporphyrinogen decarboxylase	K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D      NKI27_19080 hemF; oxygen-dependent coproporphyrinogen oxidase	K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D      NKI27_11210 hemN; oxygen-independent coproporphyrinogen III oxidase	K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D      NKI27_17705 hemJ; protoporphyrinogen oxidase HemJ	K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D      NKI27_02275 hemH; ferrochelatase	K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D      NKI27_07135 cobA; uroporphyrinogen-III C-methyltransferase	K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D      NKI27_09075 cysG; siroheme synthase CysG	K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D      NKI27_07145 AsnC family transcriptional regulator	K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D      NKI27_07150 AsnC family transcriptional regulator	K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D      NKI27_07155 hypothetical protein	K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D      NKI27_07160 hypothetical protein	K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D      NKI27_07130 nitrite reductase	K24867 nirN; dihydro-heme d1 dehydrogenase
D      NKI27_18990 cyoE; heme o synthase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      NKI27_18995 COX15/CtaA family protein	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      NKI27_07015 cobJ; precorrin-3B C(17)-methyltransferase	K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D      NKI27_07020 cobM; precorrin-4 C(11)-methyltransferase	K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D      NKI27_06985 cobalt-precorrin-5B (C(1))-methyltransferase	K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D      NKI27_06995 precorrin-8X methylmutase	K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D      NKI27_00145 AAA family ATPase	K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D      NKI27_06980 cobyrinate a,c-diamide synthase	K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D      NKI27_07040 cobN; cobaltochelatase subunit CobN	K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D      NKI27_05785 CbbQ/NirQ/NorQ/GpvN family protein	K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D      NKI27_04695 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase	K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      NKI27_06975 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase	K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      NKI27_07045 cobyric acid synthase	K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D      NKI27_07050 cbiB; adenosylcobinamide-phosphate synthase CbiB	K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D      NKI27_18230 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D      NKI27_03045 adenosylcobinamide-GDP ribazoletransferase	K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D      NKI27_18225 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D      NKI27_18220 alpha-ribazole phosphatase family protein	K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D      NKI27_00975 pyridoxamine 5'-phosphate oxidase family protein	K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D      NKI27_04710 bfr; bacterioferritin	K03594 bfr; bacterioferritin [EC:1.16.3.1]
D      NKI27_04715 bfr; bacterioferritin	K03594 bfr; bacterioferritin [EC:1.16.3.1]
C    00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:alkm00130]
D      NKI27_16710 chorismate lyase	K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D      NKI27_16715 ubiA; 4-hydroxybenzoate octaprenyltransferase	K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D      NKI27_01490 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase	K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D      NKI27_04655 UbiX family flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      NKI27_03115 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D      NKI27_12635 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D      NKI27_03110 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase	K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D      NKI27_03165 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D      NKI27_16815 FAD-dependent monooxygenase	K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D      NKI27_06215 wrbA; NAD(P)H:quinone oxidoreductase	K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B  09109 Metabolism of terpenoids and polyketides
C    00900 Terpenoid backbone biosynthesis [PATH:alkm00900]
D      NKI27_15965 dxs; 1-deoxy-D-xylulose-5-phosphate synthase	K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D      NKI27_13535 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase	K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D      NKI27_06320 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D      NKI27_04185 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D      NKI27_06325 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D      NKI27_08260 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D      NKI27_16305 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase	K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_04655 UbiX family flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      NKI27_15960 ispA; (2E,6E)-farnesyl diphosphate synthase	K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D      NKI27_16360 ispB; octaprenyl diphosphate synthase	K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D      NKI27_13545 uppS; polyprenyl diphosphate synthase	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C    00902 Monoterpenoid biosynthesis
C    00909 Sesquiterpenoid and triterpenoid biosynthesis
C    00904 Diterpenoid biosynthesis
C    00906 Carotenoid biosynthesis
C    00905 Brassinosteroid biosynthesis
C    00981 Insect hormone biosynthesis
C    00908 Zeatin biosynthesis
C    00903 Limonene degradation [PATH:alkm00903]
D      NKI27_14570 alpha/beta hydrolase	K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C    00907 Pinene, camphor and geraniol degradation [PATH:alkm00907]
D      NKI27_08370 fadB; fatty acid oxidation complex subunit alpha FadB	K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D      NKI27_12605 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      NKI27_15100 SDR family oxidoreductase	K13774 atuB; citronellol/citronellal dehydrogenase
D      NKI27_15125 NAD(P)-dependent oxidoreductase	K13775 atuG; citronellol/citronellal dehydrogenase
D      NKI27_03175 long-chain-acyl-CoA synthetase	K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-]
D      NKI27_15110 acyl-CoA dehydrogenase family protein	K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D      NKI27_15120 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D      NKI27_15105 acyl-CoA carboxylase subunit beta	K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D      NKI27_15115 enoyl-CoA hydratase-related protein	K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
D      NKI27_10195 hydroxymethylglutaryl-CoA lyase	K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D      NKI27_08375 fadA; acetyl-CoA C-acyltransferase FadA	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    01052 Type I polyketide structures
C    00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C    01051 Biosynthesis of ansamycins
D      NKI27_15305 tkt; transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C    01059 Biosynthesis of enediyne antibiotics
C    01056 Biosynthesis of type II polyketide backbone
C    01057 Biosynthesis of type II polyketide products
C    00253 Tetracycline biosynthesis
C    00523 Polyketide sugar unit biosynthesis [PATH:alkm00523]
D      NKI27_13835 rfbA; glucose-1-phosphate thymidylyltransferase RfbA	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      NKI27_13840 rfbB; dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D      NKI27_13830 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase	K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D      NKI27_13825 rfbD; dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C    01054 Nonribosomal peptide structures
C    01053 Biosynthesis of siderophore group nonribosomal peptides
D      NKI27_07070 isochorismate lyase	K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C    01055 Biosynthesis of vancomycin group antibiotics [PATH:alkm01055]
D      NKI27_10730 alpha-hydroxy-acid oxidizing protein	K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D      NKI27_13840 rfbB; dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B  09110 Biosynthesis of other secondary metabolites
C    00940 Phenylpropanoid biosynthesis
C    00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C    00941 Flavonoid biosynthesis
C    00944 Flavone and flavonol biosynthesis
C    00942 Anthocyanin biosynthesis
C    00943 Isoflavonoid biosynthesis
C    00946 Degradation of flavonoids
C    00901 Indole alkaloid biosynthesis
C    00403 Indole diterpene alkaloid biosynthesis
C    00950 Isoquinoline alkaloid biosynthesis
C    00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C    00996 Biosynthesis of various alkaloids
C    00232 Caffeine metabolism
C    00965 Betalain biosynthesis
C    00966 Glucosinolate biosynthesis
C    00402 Benzoxazinoid biosynthesis
C    00311 Penicillin and cephalosporin biosynthesis
D      NKI27_06085 bla; class A beta-lactamase	K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C    00332 Carbapenem biosynthesis [PATH:alkm00332]
D      NKI27_16340 proB; glutamate 5-kinase	K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D      NKI27_15865 glutamate-5-semialdehyde dehydrogenase	K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C    00261 Monobactam biosynthesis [PATH:alkm00261]
D      NKI27_10730 alpha-hydroxy-acid oxidizing protein	K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D      NKI27_05050 cysN; sulfate adenylyltransferase subunit CysN	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      NKI27_05055 cysD; sulfate adenylyltransferase subunit CysD	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      NKI27_12970 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      NKI27_17330 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      NKI27_08990 asd; aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      NKI27_07695 dapA; 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      NKI27_03570 dapB; 4-hydroxy-tetrahydrodipicolinate reductase	K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C    00331 Clavulanic acid biosynthesis
C    00521 Streptomycin biosynthesis [PATH:alkm00521]
D      NKI27_18495 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NKI27_16940 phosphomannomutase/phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      NKI27_13835 rfbA; glucose-1-phosphate thymidylyltransferase RfbA	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      NKI27_13840 rfbB; dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D      NKI27_13830 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase	K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D      NKI27_13825 rfbD; dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C    00524 Neomycin, kanamycin and gentamicin biosynthesis
C    00525 Acarbose and validamycin biosynthesis [PATH:alkm00525]
D      NKI27_13835 rfbA; glucose-1-phosphate thymidylyltransferase RfbA	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      NKI27_13840 rfbB; dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C    00401 Novobiocin biosynthesis [PATH:alkm00401]
D      NKI27_12410 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase	K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D      NKI27_12370 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      NKI27_07245 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      NKI27_12415 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C    00404 Staurosporine biosynthesis
C    00405 Phenazine biosynthesis
D      NKI27_02650 trpE; anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      NKI27_02645 aminodeoxychorismate/anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C    00333 Prodigiosin biosynthesis
D      NKI27_11450 fabD; ACP S-malonyltransferase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      NKI27_06670 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_11445 fabG; 3-oxoacyl-ACP reductase FabG	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_13295 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_09105 enoyl-ACP reductase	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C    00254 Aflatoxin biosynthesis
C    00998 Biosynthesis of various antibiotics
D      NKI27_11440 acpP; acyl carrier protein	K02078 acpP; acyl carrier protein
D      NKI27_13445 acyl carrier protein	K02078 acpP; acyl carrier protein
C    00999 Biosynthesis of various plant secondary metabolites [PATH:alkm00999]
D      NKI27_15340 metK; methionine adenosyltransferase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      NKI27_19075 aroE; shikimate dehydrogenase	K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C    00997 Biosynthesis of various other secondary metabolites
B
B  09111 Xenobiotics biodegradation and metabolism
C    00362 Benzoate degradation [PATH:alkm00362]
D      NKI27_08375 fadA; acetyl-CoA C-acyltransferase FadA	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      NKI27_18570 4-oxalocrotonate tautomerase family protein	K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D      NKI27_12605 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      NKI27_08370 fadB; fatty acid oxidation complex subunit alpha FadB	K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D      NKI27_12935 sodium ion-translocating decarboxylase subunit beta	K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D      NKI27_10925 acyl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C    00627 Aminobenzoate degradation [PATH:alkm00627]
D      NKI27_18785 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      NKI27_04655 UbiX family flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C    00364 Fluorobenzoate degradation
C    00625 Chloroalkane and chloroalkene degradation [PATH:alkm00625]
D      NKI27_12090 haloalkane dehalogenase	K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D      NKI27_10660 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C    00361 Chlorocyclohexane and chlorobenzene degradation [PATH:alkm00361]
D      NKI27_12090 haloalkane dehalogenase	K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
C    00623 Toluene degradation
C    00622 Xylene degradation
D      NKI27_18570 4-oxalocrotonate tautomerase family protein	K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C    00633 Nitrotoluene degradation
C    00642 Ethylbenzene degradation
D      NKI27_08375 fadA; acetyl-CoA C-acyltransferase FadA	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    00643 Styrene degradation [PATH:alkm00643]
D      NKI27_18785 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C    00791 Atrazine degradation
D      NKI27_02855 ureC; urease subunit alpha	K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D      NKI27_02850 urease subunit beta	K01429 ureB; urease subunit beta [EC:3.5.1.5]
D      NKI27_02845 ureA; urease subunit gamma	K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C    00930 Caprolactam degradation [PATH:alkm00930]
D      NKI27_00220 alkane 1-monooxygenase	K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D      NKI27_14570 alpha/beta hydrolase	K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D      NKI27_08370 fadB; fatty acid oxidation complex subunit alpha FadB	K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D      NKI27_12605 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C    00363 Bisphenol degradation
C    00621 Dioxin degradation
D      NKI27_18570 4-oxalocrotonate tautomerase family protein	K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C    00626 Naphthalene degradation [PATH:alkm00626]
D      NKI27_10660 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C    00624 Polycyclic aromatic hydrocarbon degradation
C    00365 Furfural degradation
C    00984 Steroid degradation
D      NKI27_04670 GMC oxidoreductase	K03333 choD; cholesterol oxidase [EC:1.1.3.6]
C    00980 Metabolism of xenobiotics by cytochrome P450
C    00982 Drug metabolism - cytochrome P450
C    00983 Drug metabolism - other enzymes
B
B  09112 Not included in regular maps
C    09113 Global maps only
#
A09120 Genetic Information Processing
B
B  09121 Transcription
C    03020 RNA polymerase [PATH:alkm03020]
D      NKI27_17545 rpoB; DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      NKI27_17540 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      NKI27_17385 rpoA; DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C    03022 Basal transcription factors
C    03040 Spliceosome
B
B  09122 Translation
C    03010 Ribosome [PATH:alkm03010]
D      NKI27_12400 rpsA; 30S ribosomal protein S1	K02945 RP-S1; small subunit ribosomal protein S1
D      NKI27_13565 rpsB; 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      NKI27_17480 rpsC; 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      NKI27_17390 rpsD; 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      NKI27_17425 rpsE; 30S ribosomal protein S5	K02988 RP-S5; small subunit ribosomal protein S5
D      NKI27_03860 rpsF; 30S ribosomal protein S6	K02990 RP-S6; small subunit ribosomal protein S6
D      NKI27_17530 rpsG; 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      NKI27_17440 rpsH; 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      NKI27_16140 rpsI; 30S ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      NKI27_17515 rpsJ; 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      NKI27_17395 rpsK; 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      NKI27_17535 rpsL; 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      NKI27_17400 rpsM; 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      NKI27_17445 rpsN; 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      NKI27_03655 rpsO; 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      NKI27_14415 rpsP; 30S ribosomal protein S16	K02959 RP-S16; small subunit ribosomal protein S16
D      NKI27_17465 rpsQ; 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      NKI27_03865 rpsR; 30S ribosomal protein S18	K02963 RP-S18; small subunit ribosomal protein S18
D      NKI27_17490 rpsS; 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      NKI27_16335 rpsT; 30S ribosomal protein S20	K02968 RP-S20; small subunit ribosomal protein S20
D      NKI27_17830 rpsU; 30S ribosomal protein S21	K02970 RP-S21; small subunit ribosomal protein S21
D      NKI27_17560 rplA; 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      NKI27_17495 rplB; 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      NKI27_17510 rplC; 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      NKI27_17505 rplD; 50S ribosomal protein L4	K02926 RP-L4; large subunit ribosomal protein L4
D      NKI27_17450 rplE; 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      NKI27_17435 rplF; 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      NKI27_17550 rplL; 50S ribosomal protein L7/L12	K02935 RP-L7; large subunit ribosomal protein L7/L12
D      NKI27_03875 rplI; 50S ribosomal protein L9	K02939 RP-L9; large subunit ribosomal protein L9
D      NKI27_17555 rplJ; 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      NKI27_17565 rplK; 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      NKI27_16145 rplM; 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      NKI27_17460 rplN; 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      NKI27_17415 rplO; 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      NKI27_17475 rplP; 50S ribosomal protein L16	K02878 RP-L16; large subunit ribosomal protein L16
D      NKI27_17380 rplQ; 50S ribosomal protein L17	K02879 RP-L17; large subunit ribosomal protein L17
D      NKI27_17430 rplR; 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      NKI27_14400 rplS; 50S ribosomal protein L19	K02884 RP-L19; large subunit ribosomal protein L19
D      NKI27_06875 rplT; 50S ribosomal protein L20	K02887 RP-L20; large subunit ribosomal protein L20
D      NKI27_16355 rplU; 50S ribosomal protein L21	K02888 RP-L21; large subunit ribosomal protein L21
D      NKI27_17485 rplV; 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      NKI27_17500 rplW; 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      NKI27_17455 rplX; 50S ribosomal protein L24	K02895 RP-L24; large subunit ribosomal protein L24
D      NKI27_04170 50S ribosomal protein L25/general stress protein Ctc	K02897 RP-L25; large subunit ribosomal protein L25
D      NKI27_16350 rpmA; 50S ribosomal protein L27	K02899 RP-L27; large subunit ribosomal protein L27
D      NKI27_16960 rpmB; 50S ribosomal protein L28	K02902 RP-L28; large subunit ribosomal protein L28
D      NKI27_17470 rpmC; 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      NKI27_17420 rpmD; 50S ribosomal protein L30	K02907 RP-L30; large subunit ribosomal protein L30
D      NKI27_16980 rpmE; 50S ribosomal protein L31	K02909 RP-L31; large subunit ribosomal protein L31
D      NKI27_11460 rpmF; 50S ribosomal protein L32	K02911 RP-L32; large subunit ribosomal protein L32
D      NKI27_16965 rpmG; 50S ribosomal protein L33	K02913 RP-L33; large subunit ribosomal protein L33
D      NKI27_19260 rpmH; 50S ribosomal protein L34	K02914 RP-L34; large subunit ribosomal protein L34
D      NKI27_06870 rpmI; 50S ribosomal protein L35	K02916 RP-L35; large subunit ribosomal protein L35
D      NKI27_17405 rpmJ; 50S ribosomal protein L36	K02919 RP-L36; large subunit ribosomal protein L36
D      NKI27_04505 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
C    00970 Aminoacyl-tRNA biosynthesis [PATH:alkm00970]
D      NKI27_04515 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      NKI27_12315 tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      NKI27_08325 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      NKI27_04510 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      NKI27_09275 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      NKI27_08140 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      NKI27_04155 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      NKI27_04530 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      NKI27_11315 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      NKI27_08620 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      NKI27_09240 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      NKI27_17580 tRNA-Trp	K14235 tRNA-Trp; tRNA Trp
D      NKI27_06770 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      NKI27_07725 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      NKI27_11605 gltX; glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      NKI27_14265 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      NKI27_14270 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      NKI27_14260 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      NKI27_11330 glutamine--tRNA ligase/YqeY domain fusion protein	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D      NKI27_12975 alaS; alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      NKI27_07595 aspS; aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      NKI27_18835 asnS; asparagine--tRNA ligase	K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D      NKI27_19140 glyQ; glycine--tRNA ligase subunit alpha	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D      NKI27_19145 glyS; glycine--tRNA ligase subunit beta	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D      NKI27_06860 thrS; threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      NKI27_09070 serS; serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      NKI27_11325 cysS; cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      NKI27_06425 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      NKI27_19105 fmt; methionyl-tRNA formyltransferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      NKI27_13020 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      NKI27_04935 leuS; leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      NKI27_16320 ileS; isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      NKI27_14365 lysS; lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      NKI27_16990 argS; arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      NKI27_07540 proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      NKI27_08265 hisS; histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      NKI27_06880 pheS; phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      NKI27_06885 pheT; phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      NKI27_17665 tyrS; tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      NKI27_08440 tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      NKI27_18875 trpS; tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C    03013 Nucleocytoplasmic transport
C    03015 mRNA surveillance pathway
C    03008 Ribosome biogenesis in eukaryotes
B
B  09123 Folding, sorting and degradation
C    03060 Protein export [PATH:alkm03060]
D      NKI27_17410 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      NKI27_17575 secE; preprotein translocase subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      NKI27_03620 secG; preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      NKI27_08205 secD; protein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      NKI27_08210 secF; protein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      NKI27_08200 yajC; preprotein translocase subunit YajC	K03210 yajC; preprotein translocase subunit YajC
D      NKI27_00005 yidC; membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      NKI27_15995 secA; preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      NKI27_04615 secB; protein-export chaperone SecB	K03071 secB; preprotein translocase subunit SecB
D      NKI27_14420 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      NKI27_03140 tatA; Sec-independent protein translocase subunit TatA	K03116 tatA; sec-independent protein translocase protein TatA
D      NKI27_03135 tatB; Sec-independent protein translocase protein TatB	K03117 tatB; sec-independent protein translocase protein TatB
D      NKI27_03130 tatC; twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
D      NKI27_14300 lepB; signal peptidase I	K03100 lepB; signal peptidase I [EC:3.4.21.89]
D      NKI27_10560 lspA; signal peptidase II	K03101 lspA; signal peptidase II [EC:3.4.23.36]
D      NKI27_16315 lspA; signal peptidase II	K03101 lspA; signal peptidase II [EC:3.4.23.36]
C    04141 Protein processing in endoplasmic reticulum
C    04130 SNARE interactions in vesicular transport
C    04120 Ubiquitin mediated proteolysis
C    04122 Sulfur relay system [PATH:alkm04122]
D      NKI27_03420 cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      NKI27_08235 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      NKI27_04315 rhodanese-like domain-containing protein	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      NKI27_11140 tusA; sulfurtransferase TusA	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      NKI27_09220 tusB; sulfurtransferase complex subunit TusB	K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D      NKI27_09230 tusD; sulfurtransferase complex subunit TusD	K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D      NKI27_09215 TusE/DsrC/DsvC family sulfur relay protein	K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D      NKI27_09425 mnmA; tRNA 2-thiouridine(34) synthase MnmA	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D      NKI27_01460 moaE; molybdopterin synthase catalytic subunit MoaE	K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D      NKI27_15975 moaA; GTP 3',8-cyclase MoaA	K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D      NKI27_01465 MoaD/ThiS family protein	K03636 moaD; sulfur-carrier protein
D      NKI27_04215 molybdopterin-synthase adenylyltransferase MoeB	K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D      NKI27_15980 moaC; cyclic pyranopterin monophosphate synthase MoaC	K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D      NKI27_01475 moaB; molybdenum cofactor biosynthesis protein B	K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D      NKI27_02295 thiI; tRNA 4-thiouridine(8) synthase ThiI	K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D      NKI27_02710 thiS; sulfur carrier protein ThiS	K03154 thiS; sulfur carrier protein
C    03050 Proteasome
C    03018 RNA degradation [PATH:alkm03018]
D      NKI27_17025 RNA pyrophosphohydrolase	K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D      NKI27_11490 rne; ribonuclease E	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      NKI27_11125 rhlB; ATP-dependent RNA helicase RhlB	K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D      NKI27_06310 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      NKI27_03660 pnp; polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D      NKI27_14880 DEAD/DEAH box helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      NKI27_14980 DEAD/DEAH box helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      NKI27_15270 DEAD/DEAH box helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      NKI27_03850 rnr; ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      NKI27_19170 rnr; ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      NKI27_18395 DEAD/DEAH box helicase	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      NKI27_03325 RecQ family ATP-dependent DNA helicase	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      NKI27_07095 recQ; DNA helicase RecQ	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      NKI27_01485 rho; transcription termination factor Rho	K03628 rho; transcription termination factor Rho
D      NKI27_03560 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      NKI27_06685 groL; chaperonin GroEL	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      NKI27_04375 hfq; RNA chaperone Hfq	K03666 hfq; host factor-I protein
D      NKI27_16575 ppk1; polyphosphate kinase 1	K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D      NKI27_17785 pcnB; polynucleotide adenylyltransferase PcnB	K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B  09124 Replication and repair
C    03030 DNA replication [PATH:alkm03030]
D      NKI27_00280 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_03785 exonuclease domain-containing protein	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_06130 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_09155 dnaQ; DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_06285 dnaE; DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      NKI27_08680 dnaX; DNA polymerase III subunit gamma/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      NKI27_04925 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      NKI27_13010 DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      NKI27_19250 dnaN; DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      NKI27_03880 dnaB; replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      NKI27_17840 dnaG; DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      NKI27_17365 ssb; single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NKI27_13495 rnhB; ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      NKI27_18105 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NKI27_08480 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03410 Base excision repair [PATH:alkm03410]
D      NKI27_06390 nth; endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      NKI27_14360 ung; uracil-DNA glycosylase	K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D      NKI27_04545 mutY; A/G-specific adenine glycosylase	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D      NKI27_02065 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D      NKI27_10125 xthA; exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      NKI27_18065 exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      NKI27_18105 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NKI27_14380 recJ; single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      NKI27_08480 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03420 Nucleotide excision repair [PATH:alkm03420]
D      NKI27_11700 mfd; transcription-repair coupling factor	K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D      NKI27_17375 uvrA; excinuclease ABC subunit UvrA	K03701 uvrA; excinuclease ABC subunit A
D      NKI27_12365 uvrB; excinuclease ABC subunit UvrB	K03702 uvrB; excinuclease ABC subunit B
D      NKI27_09255 uvrC; excinuclease ABC subunit UvrC	K03703 uvrC; excinuclease ABC subunit C
D      NKI27_02470 uvrD; DNA helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      NKI27_18105 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NKI27_08480 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03430 Mismatch repair [PATH:alkm03430]
D      NKI27_13485 mutS; DNA mismatch repair protein MutS	K03555 mutS; DNA mismatch repair protein MutS
D      NKI27_04365 mutL; DNA mismatch repair endonuclease MutL	K03572 mutL; DNA mismatch repair protein MutL
D      NKI27_02470 uvrD; DNA helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      NKI27_12515 sbcB; exodeoxyribonuclease I	K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D      NKI27_07545 xseA; exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      NKI27_15955 exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      NKI27_14380 recJ; single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      NKI27_17365 ssb; single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NKI27_06285 dnaE; DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      NKI27_19250 dnaN; DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      NKI27_08680 dnaX; DNA polymerase III subunit gamma/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      NKI27_04925 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      NKI27_00280 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_03785 exonuclease domain-containing protein	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_06130 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_09155 dnaQ; DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_13010 DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      NKI27_08480 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03440 Homologous recombination [PATH:alkm03440]
D      NKI27_14380 recJ; single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      NKI27_17365 ssb; single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NKI27_19235 recF; DNA replication/repair protein RecF	K03629 recF; DNA replication and repair protein RecF
D      NKI27_08690 recR; recombination mediator RecR	K06187 recR; recombination protein RecR
D      NKI27_13480 recA; recombinase RecA	K03553 recA; recombination protein RecA
D      NKI27_18105 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NKI27_07605 ruvA; Holliday junction branch migration protein RuvA	K03550 ruvA; holliday junction DNA helicase RuvA
D      NKI27_07610 ruvB; Holliday junction branch migration DNA helicase RuvB	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D      NKI27_07600 ruvC; crossover junction endodeoxyribonuclease RuvC	K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D      NKI27_17940 recG; ATP-dependent DNA helicase RecG	K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D      NKI27_06285 dnaE; DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      NKI27_19250 dnaN; DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      NKI27_08680 dnaX; DNA polymerase III subunit gamma/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      NKI27_04925 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      NKI27_00280 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_03785 exonuclease domain-containing protein	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_06130 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_09155 dnaQ; DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_13010 DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      NKI27_16985 primosomal protein N'	K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C    03450 Non-homologous end-joining
C    03460 Fanconi anemia pathway
B
B  09126 Chromosome
C    03082 ATP-dependent chromatin remodeling
C    03083 Polycomb repressive complex
B
B  09125 Information processing in viruses
C    03230 Viral genome structure
C    03240 Viral replication
C    03250 Viral life cycle - HIV-1
C    03260 Virion - Human immunodeficiency virus
C    03271 Virion - Rotavirus
C    03262 Virion - Coronavirus
C    03261 Virion - Influenza virus
C    03263 Virion - Enterovirus
C    03264 Virion - Flavivirus
C    03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C    03266 Virion - Herpesvirus
C    03268 Virion - Orthopoxvirus
C    03267 Virion - Adenovirus
C    03259 Virion - Bacteriophages T4 and T7
C    03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B  09131 Membrane transport
C    02010 ABC transporters [PATH:alkm02010]
D      NKI27_06365 modA; molybdate ABC transporter substrate-binding protein	K02020 modA; molybdate transport system substrate-binding protein
D      NKI27_06370 modB; molybdate ABC transporter permease subunit	K02018 modB; molybdate transport system permease protein
D      NKI27_06375 modC; molybdenum ABC transporter ATP-binding protein	K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D      NKI27_16745 modF; molybdate ABC transporter ATP-binding protein ModF	K05776 modF; molybdate transport system ATP-binding protein
D      NKI27_08030 Fe(3+) ABC transporter substrate-binding protein	K02012 afuA; iron(III) transport system substrate-binding protein
D      NKI27_08025 iron ABC transporter permease	K02011 afuB; iron(III) transport system permease protein
D      NKI27_14460 ABC transporter ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      NKI27_00560 thiB; thiamine ABC transporter substrate binding subunit	K02064 thiB; thiamine transport system substrate-binding protein
D      NKI27_00570 ATP-binding cassette domain-containing protein	K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D      NKI27_02410 ABC transporter permease	K11070 potC; spermidine/putrescine transport system permease protein
D      NKI27_02415 ABC transporter permease	K11071 potB; spermidine/putrescine transport system permease protein
D      NKI27_02420 ABC transporter ATP-binding protein	K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D      NKI27_14145 ABC transporter substrate-binding protein	K07323 mlaC; phospholipid transport system substrate-binding protein
D      NKI27_14150 mlaD; outer membrane lipid asymmetry maintenance protein MlaD	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      NKI27_01745 MlaD family protein	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      NKI27_01735 ABC transporter permease	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      NKI27_14155 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      NKI27_14140 STAS domain-containing protein	K07122 mlaB; phospholipid transport system transporter-binding protein
D      NKI27_01740 ATP-binding cassette domain-containing protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      NKI27_14160 ATP-binding cassette domain-containing protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      NKI27_01290 ABC transporter substrate-binding protein	K17321 glpV; glycerol transport system substrate-binding protein
D      NKI27_16855 phosphate ABC transporter substrate-binding protein PstS family protein	K02040 pstS; phosphate transport system substrate-binding protein
D      NKI27_16850 ABC transporter permease subunit	K02037 pstC; phosphate transport system permease protein
D      NKI27_16845 pstA; phosphate ABC transporter permease PstA	K02038 pstA; phosphate transport system permease protein
D      NKI27_16840 pstB; phosphate ABC transporter ATP-binding protein PstB	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      NKI27_00390 phnD; phosphonate ABC transporter substrate-binding protein	K02044 phnD; phosphonate transport system substrate-binding protein
D      NKI27_16785 putative selenate ABC transporter substrate-binding protein	K02044 phnD; phosphonate transport system substrate-binding protein
D      NKI27_00395 phnE; phosphonate ABC transporter, permease protein PhnE	K02042 phnE; phosphonate transport system permease protein
D      NKI27_16795 ABC transporter permease	K02042 phnE; phosphonate transport system permease protein
D      NKI27_16790 ATP-binding cassette domain-containing protein	K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D      NKI27_00385 phnC; phosphonate ABC transporter ATP-binding protein	K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D      NKI27_18285 amino acid ABC transporter substrate-binding protein	K09969 aapJ; general L-amino acid transport system substrate-binding protein
D      NKI27_18290 ABC transporter permease subunit	K09970 aapQ; general L-amino acid transport system permease protein
D      NKI27_18295 amino acid ABC transporter permease	K09971 aapM; general L-amino acid transport system permease protein
D      NKI27_18300 amino acid ABC transporter ATP-binding protein	K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D      NKI27_04495 ABC transporter substrate-binding protein	K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D      NKI27_04485 ABC transporter permease	K10023 aotM; arginine/ornithine transport system permease protein
D      NKI27_04490 ABC transporter permease subunit	K10024 aotQ; arginine/ornithine transport system permease protein
D      NKI27_04500 ABC transporter ATP-binding protein	K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D      NKI27_03705 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      NKI27_03700 livH; high-affinity branched-chain amino acid ABC transporter permease LivH	K01997 livH; branched-chain amino acid transport system permease protein
D      NKI27_03695 high-affinity branched-chain amino acid ABC transporter permease LivM	K01998 livM; branched-chain amino acid transport system permease protein
D      NKI27_03690 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      NKI27_03685 ATP-binding cassette domain-containing protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      NKI27_03305 urtA; urea ABC transporter substrate-binding protein	K11959 urtA; urea transport system substrate-binding protein
D      NKI27_11805 urtA; urea ABC transporter substrate-binding protein	K11959 urtA; urea transport system substrate-binding protein
D      NKI27_03300 urtB; urea ABC transporter permease subunit UrtB	K11960 urtB; urea transport system permease protein
D      NKI27_11800 urtB; urea ABC transporter permease subunit UrtB	K11960 urtB; urea transport system permease protein
D      NKI27_03295 urtC; urea ABC transporter permease subunit UrtC	K11961 urtC; urea transport system permease protein
D      NKI27_11795 urtC; urea ABC transporter permease subunit UrtC	K11961 urtC; urea transport system permease protein
D      NKI27_03290 urtD; urea ABC transporter ATP-binding protein UrtD	K11962 urtD; urea transport system ATP-binding protein
D      NKI27_11790 urtD; urea ABC transporter ATP-binding protein UrtD	K11962 urtD; urea transport system ATP-binding protein
D      NKI27_03285 urtE; urea ABC transporter ATP-binding subunit UrtE	K11963 urtE; urea transport system ATP-binding protein
D      NKI27_11785 urtE; urea ABC transporter ATP-binding subunit UrtE	K11963 urtE; urea transport system ATP-binding protein
D      NKI27_09125 extracellular solute-binding protein	K13893 yejA; microcin C transport system substrate-binding protein
D      NKI27_09130 extracellular solute-binding protein	K13893 yejA; microcin C transport system substrate-binding protein
D      NKI27_09120 microcin C ABC transporter permease YejB	K13894 yejB; microcin C transport system permease protein
D      NKI27_09115 ABC transporter permease	K13895 yejE; microcin C transport system permease protein
D      NKI27_09110 ABC transporter ATP-binding protein	K13896 yejF; microcin C transport system ATP-binding protein
D      NKI27_04835 zinc ABC transporter substrate-binding protein	K09815 znuA; zinc transport system substrate-binding protein
D      NKI27_01910 znuB; zinc ABC transporter permease subunit ZnuB	K09816 znuB; zinc transport system permease protein
D      NKI27_04845 metal ABC transporter permease	K09816 znuB; zinc transport system permease protein
D      NKI27_01915 znuC; zinc ABC transporter ATP-binding protein ZnuC	K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D      NKI27_13780 ABC transporter permease	K09690 wzm; homopolymeric O-antigen transport system permease protein
D      NKI27_09500 lipoprotein-releasing ABC transporter permease subunit	K09808 lolC_E; lipoprotein-releasing system permease protein
D      NKI27_09505 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD	K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D      NKI27_12675 ccmD; heme exporter protein CcmD	K02196 ccmD; heme exporter protein D
D      NKI27_12680 heme ABC transporter permease	K02195 ccmC; heme exporter protein C
D      NKI27_12685 ccmB; heme exporter protein CcmB	K02194 ccmB; heme exporter protein B
D      NKI27_12690 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA	K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D      NKI27_13000 lptF; LPS export ABC transporter permease LptF	K07091 lptF; lipopolysaccharide export system permease protein
D      NKI27_12995 lptG; LPS export ABC transporter permease LptG	K11720 lptG; lipopolysaccharide export system permease protein
D      NKI27_14185 lptB; LPS export ABC transporter ATP-binding protein	K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D      NKI27_02950 ABC transporter permease	K19341 nosY; Cu-processing system permease protein
D      NKI27_02955 ABC transporter ATP-binding protein	K19340 nosF; Cu-processing system ATP-binding protein
D      NKI27_02085 ftsX; permease-like cell division protein FtsX	K09811 ftsX; cell division transport system permease protein
D      NKI27_02080 ftsE; cell division ATP-binding protein FtsE	K09812 ftsE; cell division transport system ATP-binding protein
D      NKI27_09530 msbA; lipid A export permease/ATP-binding protein MsbA	K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D      NKI27_18015 peptidase domain-containing ABC transporter	K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D      NKI27_12145 ABC transporter ATP-binding protein/permease	K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D      NKI27_00500 ABC transporter ATP-binding protein/permease	K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D      NKI27_13810 type I secretion system permease/ATPase	K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C    02060 Phosphotransferase system (PTS) [PATH:alkm02060]
D      NKI27_01200 ptsP; phosphoenolpyruvate--protein phosphotransferase	K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D      NKI27_17020 ptsP; phosphoenolpyruvate--protein phosphotransferase	K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D      NKI27_14210 HPr family phosphocarrier protein	K08485 ptsO; phosphocarrier protein NPr
D      NKI27_14200 ptsN; PTS IIA-like nitrogen regulatory protein PtsN	K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C    03070 Bacterial secretion system [PATH:alkm03070]
D      NKI27_17090 TolC family outer membrane protein	K12340 tolC; outer membrane protein
D      NKI27_06700 gspD; type II secretion system secretin GspD	K02453 gspD; general secretion pathway protein D
D      NKI27_10240 gspF; type II secretion system inner membrane protein GspF	K02455 gspF; general secretion pathway protein F
D      NKI27_10245 gspG; type II secretion system major pseudopilin GspG	K02456 gspG; general secretion pathway protein G
D      NKI27_06205 GspE/PulE family protein	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      NKI27_10235 gspE; type II secretion system ATPase GspE	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      NKI27_08205 secD; protein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      NKI27_08210 secF; protein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      NKI27_17575 secE; preprotein translocase subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      NKI27_03620 secG; preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      NKI27_17410 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      NKI27_08200 yajC; preprotein translocase subunit YajC	K03210 yajC; preprotein translocase subunit YajC
D      NKI27_00005 yidC; membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      NKI27_15995 secA; preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      NKI27_04615 secB; protein-export chaperone SecB	K03071 secB; preprotein translocase subunit SecB
D      NKI27_14420 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      NKI27_03140 tatA; Sec-independent protein translocase subunit TatA	K03116 tatA; sec-independent protein translocase protein TatA
D      NKI27_03135 tatB; Sec-independent protein translocase protein TatB	K03117 tatB; sec-independent protein translocase protein TatB
D      NKI27_03130 tatC; twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
D      NKI27_06170 tssJ; type VI secretion system lipoprotein TssJ	K11906 vasD; type VI secretion system protein VasD
D      NKI27_13625 tssH; type VI secretion system ATPase TssH	K11907 vasG; type VI secretion system protein VasG
B
B  09132 Signal transduction
C    02020 Two-component system [PATH:alkm02020]
D      NKI27_16725 phoR; phosphate regulon sensor histidine kinase PhoR	K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D      NKI27_16720 phoB; phosphate regulon transcriptional regulator PhoB	K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D      NKI27_13205 alkaline phosphatase	K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D      NKI27_16855 phosphate ABC transporter substrate-binding protein PstS family protein	K02040 pstS; phosphate transport system substrate-binding protein
D      NKI27_15505 response regulator transcription factor	K07660 phoP; two-component system, OmpR family, response regulator PhoP
D      NKI27_02620 response regulator transcription factor	K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D      NKI27_14480 ATP-binding protein	K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D      NKI27_14485 response regulator	K07661 rstA; two-component system, OmpR family, response regulator RstA
D      NKI27_14315 DegQ family serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      NKI27_10530 efflux RND transporter periplasmic adaptor subunit	K07798 cusB; membrane fusion protein, copper/silver efflux system
D      NKI27_14790 efflux RND transporter periplasmic adaptor subunit	K07798 cusB; membrane fusion protein, copper/silver efflux system
D      NKI27_10520 efflux RND transporter permease subunit	K07787 cusA; copper/silver efflux system protein
D      NKI27_14780 efflux RND transporter permease subunit	K07787 cusA; copper/silver efflux system protein
D      NKI27_03225 flagellin	K02406 fliC; flagellin
D      NKI27_12765 RNA polymerase sigma factor FliA	K02405 fliA; RNA polymerase sigma factor FliA
D      NKI27_04325 motA; flagellar motor stator protein MotA	K02556 motA; chemotaxis protein MotA
D      NKI27_12740 flagellar motor protein	K02556 motA; chemotaxis protein MotA
D      NKI27_15950 pomA; flagellar motor protein PomA	K02556 motA; chemotaxis protein MotA
D      NKI27_19070 MotA/TolQ/ExbB proton channel family protein	K02556 motA; chemotaxis protein MotA
D      NKI27_18995 COX15/CtaA family protein	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      NKI27_19255 dnaA; chromosomal replication initiator protein DnaA	K02313 dnaA; chromosomal replication initiator protein
D      NKI27_04775 response regulator transcription factor	K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D      NKI27_01525 histidine kinase	K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D      NKI27_01520 LytTR family DNA-binding domain-containing protein	K08083 algR; two-component system, LytTR family, response regulator AlgR
D      NKI27_00790 UDP-glucose/GDP-mannose dehydrogenase family protein	K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D      NKI27_01450 narL; two-component system response regulator NarL	K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D      NKI27_05080 response regulator	K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D      NKI27_09250 uvrY; UvrY/SirA/GacA family response regulator transcription factor	K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D      NKI27_12965 csrA; carbon storage regulator CsrA	K03563 csrA; carbon storage regulator
D      NKI27_13575 [protein-PII] uridylyltransferase	K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D      NKI27_17210 glnL; nitrogen regulation protein NR(II)	K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D      NKI27_17215 glnG; nitrogen regulation protein NR(I)	K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D      NKI27_02390 glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_13225 glutamine synthetase III	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_17200 glnA; glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_16250 ATP-binding protein	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      NKI27_16255 sigma-54 dependent transcriptional regulator	K02667 pilR; two-component system, NtrC family, response regulator PilR
D      NKI27_14190 RNA polymerase factor sigma-54	K03092 rpoN; RNA polymerase sigma-54 factor
D      NKI27_03355 sigma 54-interacting transcriptional regulator	K07715 glrR; two-component system, NtrC family, response regulator GlrR
D      NKI27_08525 protein-glutamate O-methyltransferase CheR	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      NKI27_12855 protein-glutamate O-methyltransferase	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      NKI27_12720 chemotaxis protein CheW	K03408 cheW; purine-binding chemotaxis protein CheW
D      NKI27_12860 chemotaxis protein CheW	K03408 cheW; purine-binding chemotaxis protein CheW
D      NKI27_12750 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      NKI27_12865 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      NKI27_12760 cheY; chemotaxis response regulator CheY	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      NKI27_12870 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      NKI27_12745 chemotaxis response regulator protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      NKI27_12845 chemotaxis response regulator protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      NKI27_08330 chemotaxis protein CheV	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_08520 chemotaxis protein CheV	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_10605 chemotaxis protein	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_01940 protein-glutamate O-methyltransferase CheR	K02661 pilK; type IV pilus assembly protein PilK
D      NKI27_01945 methyl-accepting chemotaxis protein	K02660 pilJ; twitching motility protein PilJ
D      NKI27_01950 chemotaxis protein CheW	K02659 pilI; twitching motility protein PilI
D      NKI27_01960 pilG; twitching motility response regulator PilG	K02657 pilG; twitching motility two-component system response regulator PilG
D      NKI27_01955 pilH; twitching motility response regulator PilH	K02658 pilH; twitching motility two-component system response regulator PilH
D      NKI27_01930 chemotaxis protein CheB	K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D      NKI27_12920 sigma-54 dependent transcriptional regulator	K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D      NKI27_12915 ATP-binding protein	K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D      NKI27_12910 sigma-54 dependent transcriptional regulator	K10943 flrC; two-component system, response regulator FlrC
D      NKI27_16880 crp; cAMP-activated global transcriptional regulator CRP	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      NKI27_16165 response regulator transcription factor	K15012 regA; two-component system, response regulator RegA
D      NKI27_16135 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit	K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D      NKI27_16130 cytochrome bc complex cytochrome b subunit	K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D      NKI27_16125 cytochrome c1	K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D      NKI27_06450 cbb3-type cytochrome c oxidase subunit I	K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D      NKI27_11165 ccoN; cytochrome-c oxidase, cbb3-type subunit I	K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D      NKI27_06445 cbb3-type cytochrome c oxidase subunit II	K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D      NKI27_11170 ccoO; cytochrome-c oxidase, cbb3-type subunit II	K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D      NKI27_11175 cbb3-type cytochrome c oxidase subunit 3	K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D      NKI27_11180 ccoP; cytochrome-c oxidase, cbb3-type subunit III	K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D      NKI27_08665 cytochrome ubiquinol oxidase subunit I	K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D      NKI27_08670 cydB; cytochrome d ubiquinol oxidase subunit II	K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D      NKI27_17090 TolC family outer membrane protein	K12340 tolC; outer membrane protein
D      NKI27_09550 low molecular weight phosphotyrosine protein phosphatase	K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D      NKI27_13690 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D      NKI27_09385 ATP-binding protein	K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D      NKI27_12830 Hpt domain-containing protein	K20976 hptB; histidine phosphotransfer protein HptB
D      NKI27_11500 fused response regulator/phosphatase	K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D      NKI27_12835 SpoIIE family protein phosphatase	K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D      NKI27_11505 STAS domain-containing protein	K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D      NKI27_12840 STAS domain-containing protein	K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
C    04010 MAPK signaling pathway
C    04013 MAPK signaling pathway - fly
C    04016 MAPK signaling pathway - plant
C    04011 MAPK signaling pathway - yeast
C    04012 ErbB signaling pathway
C    04014 Ras signaling pathway
C    04015 Rap1 signaling pathway
C    04310 Wnt signaling pathway
C    04330 Notch signaling pathway
C    04340 Hedgehog signaling pathway
C    04341 Hedgehog signaling pathway - fly
C    04350 TGF-beta signaling pathway
C    04390 Hippo signaling pathway
C    04391 Hippo signaling pathway - fly
C    04392 Hippo signaling pathway - multiple species
C    04370 VEGF signaling pathway
C    04371 Apelin signaling pathway
C    04630 JAK-STAT signaling pathway
C    04064 NF-kappa B signaling pathway
C    04668 TNF signaling pathway
C    04066 HIF-1 signaling pathway
C    04068 FoxO signaling pathway
C    04020 Calcium signaling pathway
C    04070 Phosphatidylinositol signaling system
C    04072 Phospholipase D signaling pathway
C    04071 Sphingolipid signaling pathway
C    04024 cAMP signaling pathway
C    04022 cGMP-PKG signaling pathway
C    04151 PI3K-Akt signaling pathway
C    04152 AMPK signaling pathway
C    04150 mTOR signaling pathway
C    04075 Plant hormone signal transduction
B
B  09133 Signaling molecules and interaction
C    04080 Neuroactive ligand-receptor interaction
C    04060 Cytokine-cytokine receptor interaction
C    04061 Viral protein interaction with cytokine and cytokine receptor
C    04512 ECM-receptor interaction
C    04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B  09141 Transport and catabolism
C    04144 Endocytosis
C    04145 Phagosome
C    04142 Lysosome
C    04146 Peroxisome
C    04140 Autophagy - animal
C    04138 Autophagy - yeast
C    04136 Autophagy - other
C    04137 Mitophagy - animal
C    04139 Mitophagy - yeast
C    04148 Efferocytosis
D      NKI27_16135 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit	K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B  09143 Cell growth and death
C    04110 Cell cycle
C    04111 Cell cycle - yeast
C    04112 Cell cycle - Caulobacter
C    04113 Meiosis - yeast
C    04114 Oocyte meiosis
C    04210 Apoptosis
C    04214 Apoptosis - fly
C    04215 Apoptosis - multiple species
C    04216 Ferroptosis
C    04217 Necroptosis
C    04115 p53 signaling pathway
C    04218 Cellular senescence
B
B  09144 Cellular community - eukaryotes
C    04510 Focal adhesion
C    04520 Adherens junction
C    04530 Tight junction
C    04540 Gap junction
C    04550 Signaling pathways regulating pluripotency of stem cells
B
B  09145 Cellular community - prokaryotes
C    02024 Quorum sensing [PATH:alkm02024]
D      NKI27_04375 hfq; RNA chaperone Hfq	K03666 hfq; host factor-I protein
D      NKI27_02650 trpE; anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      NKI27_02645 aminodeoxychorismate/anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      NKI27_02780 3-deoxy-7-phosphoheptulonate synthase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      NKI27_09080 3-deoxy-7-phosphoheptulonate synthase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      NKI27_14675 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      NKI27_03355 sigma 54-interacting transcriptional regulator	K07715 glrR; two-component system, NtrC family, response regulator GlrR
D      NKI27_03705 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      NKI27_03700 livH; high-affinity branched-chain amino acid ABC transporter permease LivH	K01997 livH; branched-chain amino acid transport system permease protein
D      NKI27_03695 high-affinity branched-chain amino acid ABC transporter permease LivM	K01998 livM; branched-chain amino acid transport system permease protein
D      NKI27_03690 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      NKI27_03685 ATP-binding cassette domain-containing protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      NKI27_08800 AMP-binding protein	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      NKI27_16880 crp; cAMP-activated global transcriptional regulator CRP	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      NKI27_15970 ribA; GTP cyclohydrolase II	K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D      NKI27_16410 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D      NKI27_02755 efflux RND transporter periplasmic adaptor subunit	K18306 mexH; membrane fusion protein, multidrug efflux system
D      NKI27_00005 yidC; membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      NKI27_17575 secE; preprotein translocase subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      NKI27_03620 secG; preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      NKI27_17410 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      NKI27_08200 yajC; preprotein translocase subunit YajC	K03210 yajC; preprotein translocase subunit YajC
D      NKI27_15995 secA; preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      NKI27_04615 secB; protein-export chaperone SecB	K03071 secB; preprotein translocase subunit SecB
D      NKI27_14420 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C    05111 Biofilm formation - Vibrio cholerae
C    02025 Biofilm formation - Pseudomonas aeruginosa
C    02026 Biofilm formation - Escherichia coli
B
B  09142 Cell motility
C    02030 Bacterial chemotaxis [PATH:alkm02030]
D      NKI27_12750 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      NKI27_12865 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      NKI27_12720 chemotaxis protein CheW	K03408 cheW; purine-binding chemotaxis protein CheW
D      NKI27_12860 chemotaxis protein CheW	K03408 cheW; purine-binding chemotaxis protein CheW
D      NKI27_12760 cheY; chemotaxis response regulator CheY	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      NKI27_12870 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      NKI27_12755 protein phosphatase CheZ	K03414 cheZ; chemotaxis protein CheZ
D      NKI27_12745 chemotaxis response regulator protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      NKI27_12845 chemotaxis response regulator protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      NKI27_08330 chemotaxis protein CheV	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_08520 chemotaxis protein CheV	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_10605 chemotaxis protein	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_12850 cheD; chemoreceptor glutamine deamidase CheD	K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D      NKI27_08525 protein-glutamate O-methyltransferase CheR	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      NKI27_12855 protein-glutamate O-methyltransferase	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      NKI27_12895 fliG; flagellar motor switch protein FliG	K02410 fliG; flagellar motor switch protein FliG
D      NKI27_12815 fliM; flagellar motor switch protein FliM	K02416 fliM; flagellar motor switch protein FliM
D      NKI27_12810 fliN; flagellar motor switch protein FliN	K02417 fliN; flagellar motor switch protein FliN
D      NKI27_04325 motA; flagellar motor stator protein MotA	K02556 motA; chemotaxis protein MotA
D      NKI27_12740 flagellar motor protein	K02556 motA; chemotaxis protein MotA
D      NKI27_15950 pomA; flagellar motor protein PomA	K02556 motA; chemotaxis protein MotA
D      NKI27_19070 MotA/TolQ/ExbB proton channel family protein	K02556 motA; chemotaxis protein MotA
D      NKI27_04330 motB; flagellar motor protein MotB	K02557 motB; chemotaxis protein MotB
D      NKI27_12735 motD; flagellar motor protein MotD	K02557 motB; chemotaxis protein MotB
D      NKI27_15945 flagellar motor protein MotB	K02557 motB; chemotaxis protein MotB
C    02040 Flagellar assembly [PATH:alkm02040]
D      NKI27_12905 fliE; flagellar hook-basal body complex protein FliE	K02408 fliE; flagellar hook-basal body complex protein FliE
D      NKI27_12900 fliF; flagellar M-ring protein FliF	K02409 fliF; flagellar M-ring protein FliF
D      NKI27_12895 fliG; flagellar motor switch protein FliG	K02410 fliG; flagellar motor switch protein FliG
D      NKI27_12885 fliI; flagellar protein export ATPase FliI	K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D      NKI27_12820 flagellar basal body-associated FliL family protein	K02415 fliL; flagellar protein FliL
D      NKI27_12815 fliM; flagellar motor switch protein FliM	K02416 fliM; flagellar motor switch protein FliM
D      NKI27_12810 fliN; flagellar motor switch protein FliN	K02417 fliN; flagellar motor switch protein FliN
D      NKI27_12800 fliP; flagellar type III secretion system pore protein FliP	K02419 fliP; flagellar biosynthesis protein FliP
D      NKI27_12795 fliQ; flagellar biosynthesis protein FliQ	K02420 fliQ; flagellar biosynthesis protein FliQ
D      NKI27_12790 fliR; flagellar biosynthetic protein FliR	K02421 fliR; flagellar biosynthesis protein FliR
D      NKI27_12780 flhA; flagellar biosynthesis protein FlhA	K02400 flhA; flagellar biosynthesis protein FlhA
D      NKI27_12785 flhB; flagellar biosynthesis protein FlhB	K02401 flhB; flagellar biosynthesis protein FlhB
D      NKI27_08085 flgB; flagellar basal body rod protein FlgB	K02387 flgB; flagellar basal-body rod protein FlgB
D      NKI27_08090 flgC; flagellar basal body rod protein FlgC	K02388 flgC; flagellar basal-body rod protein FlgC
D      NKI27_08095 flagellar hook assembly protein FlgD	K02389 flgD; flagellar basal-body rod modification protein FlgD
D      NKI27_08105 flgF; flagellar basal-body rod protein FlgF	K02391 flgF; flagellar basal-body rod protein FlgF
D      NKI27_08110 flgG; flagellar basal-body rod protein FlgG	K02392 flgG; flagellar basal-body rod protein FlgG
D      NKI27_08115 flgH; flagellar basal body L-ring protein FlgH	K02393 flgH; flagellar L-ring protein FlgH
D      NKI27_08120 flagellar basal body P-ring protein FlgI	K02394 flgI; flagellar P-ring protein FlgI
D      NKI27_03225 flagellin	K02406 fliC; flagellin
D      NKI27_07450 fliS; flagellar export chaperone FliS	K02422 fliS; flagellar secretion chaperone FliS
D      NKI27_04325 motA; flagellar motor stator protein MotA	K02556 motA; chemotaxis protein MotA
D      NKI27_12740 flagellar motor protein	K02556 motA; chemotaxis protein MotA
D      NKI27_15950 pomA; flagellar motor protein PomA	K02556 motA; chemotaxis protein MotA
D      NKI27_19070 MotA/TolQ/ExbB proton channel family protein	K02556 motA; chemotaxis protein MotA
D      NKI27_04330 motB; flagellar motor protein MotB	K02557 motB; chemotaxis protein MotB
D      NKI27_12735 motD; flagellar motor protein MotD	K02557 motB; chemotaxis protein MotB
D      NKI27_15945 flagellar motor protein MotB	K02557 motB; chemotaxis protein MotB
D      NKI27_17845 rpoD; RNA polymerase sigma factor RpoD	K03086 rpoD; RNA polymerase primary sigma factor
D      NKI27_12920 sigma-54 dependent transcriptional regulator	K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D      NKI27_14190 RNA polymerase factor sigma-54	K03092 rpoN; RNA polymerase sigma-54 factor
D      NKI27_12910 sigma-54 dependent transcriptional regulator	K10943 flrC; two-component system, response regulator FlrC
D      NKI27_12765 RNA polymerase sigma factor FliA	K02405 fliA; RNA polymerase sigma factor FliA
C    04814 Motor proteins
C    04820 Cytoskeleton in muscle cells
D      NKI27_06310 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C    04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B  09151 Immune system
C    04640 Hematopoietic cell lineage
C    04610 Complement and coagulation cascades
C    04611 Platelet activation
C    04613 Neutrophil extracellular trap formation
C    04620 Toll-like receptor signaling pathway
C    04624 Toll and Imd signaling pathway
C    04621 NOD-like receptor signaling pathway
C    04622 RIG-I-like receptor signaling pathway
C    04623 Cytosolic DNA-sensing pathway
C    04625 C-type lectin receptor signaling pathway
C    04650 Natural killer cell mediated cytotoxicity
C    04612 Antigen processing and presentation
C    04660 T cell receptor signaling pathway
C    04658 Th1 and Th2 cell differentiation
C    04659 Th17 cell differentiation
C    04657 IL-17 signaling pathway
C    04662 B cell receptor signaling pathway
C    04664 Fc epsilon RI signaling pathway
C    04666 Fc gamma R-mediated phagocytosis
C    04670 Leukocyte transendothelial migration
C    04672 Intestinal immune network for IgA production
C    04062 Chemokine signaling pathway
B
B  09152 Endocrine system
C    04911 Insulin secretion
C    04910 Insulin signaling pathway
C    04922 Glucagon signaling pathway
C    04923 Regulation of lipolysis in adipocytes
C    04920 Adipocytokine signaling pathway
C    03320 PPAR signaling pathway
C    04929 GnRH secretion
C    04912 GnRH signaling pathway
C    04913 Ovarian steroidogenesis
C    04915 Estrogen signaling pathway
C    04914 Progesterone-mediated oocyte maturation
C    04917 Prolactin signaling pathway
C    04921 Oxytocin signaling pathway
C    04926 Relaxin signaling pathway
C    04935 Growth hormone synthesis, secretion and action
C    04918 Thyroid hormone synthesis
C    04919 Thyroid hormone signaling pathway
C    04928 Parathyroid hormone synthesis, secretion and action
C    04916 Melanogenesis
C    04924 Renin secretion
C    04614 Renin-angiotensin system
C    04925 Aldosterone synthesis and secretion
C    04927 Cortisol synthesis and secretion
B
B  09153 Circulatory system
C    04260 Cardiac muscle contraction
C    04261 Adrenergic signaling in cardiomyocytes
C    04270 Vascular smooth muscle contraction
B
B  09154 Digestive system
C    04970 Salivary secretion
C    04971 Gastric acid secretion
C    04972 Pancreatic secretion
C    04976 Bile secretion
C    04973 Carbohydrate digestion and absorption
C    04974 Protein digestion and absorption
C    04975 Fat digestion and absorption
C    04979 Cholesterol metabolism
C    04977 Vitamin digestion and absorption
C    04980 Cobalamin transport and metabolism
D      NKI27_09190 metH; methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C    04978 Mineral absorption
B
B  09155 Excretory system
C    04962 Vasopressin-regulated water reabsorption
C    04960 Aldosterone-regulated sodium reabsorption
C    04961 Endocrine and other factor-regulated calcium reabsorption
C    04964 Proximal tubule bicarbonate reclamation
C    04966 Collecting duct acid secretion
B
B  09156 Nervous system
C    04724 Glutamatergic synapse
C    04727 GABAergic synapse
C    04725 Cholinergic synapse
C    04728 Dopaminergic synapse
C    04726 Serotonergic synapse
C    04720 Long-term potentiation
C    04730 Long-term depression
C    04723 Retrograde endocannabinoid signaling
C    04721 Synaptic vesicle cycle
C    04722 Neurotrophin signaling pathway
B
B  09157 Sensory system
C    04744 Phototransduction
C    04745 Phototransduction - fly
C    04740 Olfactory transduction
C    04742 Taste transduction
C    04750 Inflammatory mediator regulation of TRP channels
B
B  09158 Development and regeneration
C    04320 Dorso-ventral axis formation
C    04360 Axon guidance
C    04361 Axon regeneration
C    04380 Osteoclast differentiation
B
B  09149 Aging
C    04211 Longevity regulating pathway
C    04212 Longevity regulating pathway - worm
C    04213 Longevity regulating pathway - multiple species
B
B  09159 Environmental adaptation
C    04710 Circadian rhythm
C    04713 Circadian entrainment
C    04711 Circadian rhythm - fly
C    04712 Circadian rhythm - plant
C    04714 Thermogenesis
C    04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B  09161 Cancer: overview
C    05200 Pathways in cancer
C    05202 Transcriptional misregulation in cancer
C    05206 MicroRNAs in cancer
C    05205 Proteoglycans in cancer
C    05204 Chemical carcinogenesis - DNA adducts
C    05207 Chemical carcinogenesis - receptor activation
C    05208 Chemical carcinogenesis - reactive oxygen species
C    05203 Viral carcinogenesis
C    05230 Central carbon metabolism in cancer
C    05231 Choline metabolism in cancer
C    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B  09162 Cancer: specific types
C    05210 Colorectal cancer
C    05212 Pancreatic cancer
C    05225 Hepatocellular carcinoma
C    05226 Gastric cancer
C    05214 Glioma
C    05216 Thyroid cancer
C    05221 Acute myeloid leukemia
C    05220 Chronic myeloid leukemia
C    05217 Basal cell carcinoma
C    05218 Melanoma
C    05211 Renal cell carcinoma
C    05219 Bladder cancer
C    05215 Prostate cancer
C    05213 Endometrial cancer
C    05224 Breast cancer
C    05222 Small cell lung cancer
C    05223 Non-small cell lung cancer
B
B  09172 Infectious disease: viral
C    05166 Human T-cell leukemia virus 1 infection
C    05170 Human immunodeficiency virus 1 infection
C    05161 Hepatitis B
C    05160 Hepatitis C
C    05171 Coronavirus disease - COVID-19
C    05164 Influenza A
C    05162 Measles
C    05168 Herpes simplex virus 1 infection
C    05163 Human cytomegalovirus infection
C    05167 Kaposi sarcoma-associated herpesvirus infection
C    05169 Epstein-Barr virus infection
C    05165 Human papillomavirus infection
B
B  09171 Infectious disease: bacterial
C    05110 Vibrio cholerae infection
C    05120 Epithelial cell signaling in Helicobacter pylori infection
C    05130 Pathogenic Escherichia coli infection
C    05132 Salmonella infection
C    05131 Shigellosis
C    05135 Yersinia infection
C    05133 Pertussis
C    05134 Legionellosis
C    05150 Staphylococcus aureus infection
C    05152 Tuberculosis
C    05100 Bacterial invasion of epithelial cells
B
B  09174 Infectious disease: parasitic
C    05146 Amoebiasis
C    05144 Malaria
C    05145 Toxoplasmosis
C    05140 Leishmaniasis
C    05142 Chagas disease
C    05143 African trypanosomiasis
B
B  09163 Immune disease
C    05310 Asthma
C    05322 Systemic lupus erythematosus
C    05323 Rheumatoid arthritis
C    05320 Autoimmune thyroid disease
C    05321 Inflammatory bowel disease
C    05330 Allograft rejection
C    05332 Graft-versus-host disease
C    05340 Primary immunodeficiency
B
B  09164 Neurodegenerative disease
C    05010 Alzheimer disease
C    05012 Parkinson disease
C    05014 Amyotrophic lateral sclerosis
C    05016 Huntington disease
C    05017 Spinocerebellar ataxia
C    05020 Prion disease
C    05022 Pathways of neurodegeneration - multiple diseases
B
B  09165 Substance dependence
C    05030 Cocaine addiction
C    05031 Amphetamine addiction
C    05032 Morphine addiction
C    05033 Nicotine addiction
C    05034 Alcoholism
B
B  09166 Cardiovascular disease
C    05417 Lipid and atherosclerosis
C    05418 Fluid shear stress and atherosclerosis
C    05410 Hypertrophic cardiomyopathy
C    05412 Arrhythmogenic right ventricular cardiomyopathy
C    05414 Dilated cardiomyopathy
C    05415 Diabetic cardiomyopathy
C    05416 Viral myocarditis
B
B  09167 Endocrine and metabolic disease
C    04930 Type II diabetes mellitus
C    04940 Type I diabetes mellitus
C    04950 Maturity onset diabetes of the young
C    04936 Alcoholic liver disease
C    04932 Non-alcoholic fatty liver disease
C    04931 Insulin resistance
C    04933 AGE-RAGE signaling pathway in diabetic complications
C    04934 Cushing syndrome
B
B  09175 Drug resistance: antimicrobial
C    01501 beta-Lactam resistance [PATH:alkm01501]
D      NKI27_06660 AmpG family muropeptide MFS transporter	K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D      NKI27_11720 nagZ; beta-N-acetylhexosaminidase	K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D      NKI27_06085 bla; class A beta-lactamase	K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D      NKI27_19160 efflux RND transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      NKI27_02750 efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_19165 efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_12280 multidrug efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_17090 TolC family outer membrane protein	K12340 tolC; outer membrane protein
D      NKI27_16505 penicillin-binding protein 1A	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      NKI27_15845 mrdA; penicillin-binding protein 2	K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D      NKI27_16070 penicillin-binding transpeptidase domain-containing protein	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C    01502 Vancomycin resistance [PATH:alkm01502]
D      NKI27_16030 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      NKI27_03885 alr; alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      NKI27_16060 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D      NKI27_16055 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      NKI27_16040 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C    01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:alkm01503]
D      NKI27_15505 response regulator transcription factor	K07660 phoP; two-component system, OmpR family, response regulator PhoP
D      NKI27_02620 response regulator transcription factor	K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D      NKI27_04360 N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      NKI27_14315 DegQ family serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      NKI27_16515 thiol:disulfide interchange protein DsbA/DsbL	K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D      NKI27_19160 efflux RND transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      NKI27_02750 efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_19165 efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_12280 multidrug efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_17090 TolC family outer membrane protein	K12340 tolC; outer membrane protein
D      NKI27_13505 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B  09176 Drug resistance: antineoplastic
C    01521 EGFR tyrosine kinase inhibitor resistance
C    01524 Platinum drug resistance
C    01523 Antifolate resistance
C    01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B  09181 Protein families: metabolism
C    01000 Enzymes [BR:alkm01000]
C    01001 Protein kinases [BR:alkm01001]
D      NKI27_11935 serine protein kinase RIO	K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D      NKI27_16725 phoR; phosphate regulon sensor histidine kinase PhoR	K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D      NKI27_14480 ATP-binding protein	K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D      NKI27_19190 sensor histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      NKI27_05080 response regulator	K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D      NKI27_01525 histidine kinase	K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D      NKI27_17210 glnL; nitrogen regulation protein NR(II)	K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D      NKI27_16250 ATP-binding protein	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      NKI27_12750 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      NKI27_12865 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      NKI27_12915 ATP-binding protein	K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D      NKI27_09385 ATP-binding protein	K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
C    01009 Protein phosphatases and associated proteins [BR:alkm01009]
D      NKI27_15345 ahcY; adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      NKI27_12200 htpG; molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
D      NKI27_04280 serB; phosphoserine phosphatase SerB	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C    01002 Peptidases and inhibitors [BR:alkm01002]
D      NKI27_10560 lspA; signal peptidase II	K03101 lspA; signal peptidase II [EC:3.4.23.36]
D      NKI27_16315 lspA; signal peptidase II	K03101 lspA; signal peptidase II [EC:3.4.23.36]
D      NKI27_13990 A24 family peptidase	K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D      NKI27_07555 guaA; glutamine-hydrolyzing GMP synthase	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      NKI27_18015 peptidase domain-containing ABC transporter	K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D      NKI27_09040 purF; amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D      NKI27_16455 gltB; glutamate synthase large subunit	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      NKI27_00095 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      NKI27_02165 class GN sortase	K07284 srtA; sortase A [EC:3.4.22.70]
D      NKI27_06830 pepN; aminopeptidase N	K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D      NKI27_19050 prlC; oligopeptidase A	K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D      NKI27_11555 insulinase family protein	K06972 PITRM1; presequence protease [EC:3.4.24.-]
D      NKI27_13005 leucyl aminopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      NKI27_13595 dapE; succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      NKI27_18885 aminoacyl-histidine dipeptidase	K01270 pepD; dipeptidase D [EC:3.4.13.-]
D      NKI27_10880 M23 family metallopeptidase	K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D      NKI27_13570 map; type I methionyl aminopeptidase	K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D      NKI27_03105 pepP; Xaa-Pro aminopeptidase	K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D      NKI27_03600 ftsH; ATP-dependent zinc metalloprotease FtsH	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      NKI27_11415 htpX; protease HtpX	K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D      NKI27_07665 M48 family metalloprotease	K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D      NKI27_13530 rseP; RIP metalloprotease RseP	K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D      NKI27_05700 HlyD family efflux transporter periplasmic adaptor subunit	K16922 yydH; putative peptide zinc metalloprotease protein
D      NKI27_14575 zinc-dependent peptidase	K09933 mtfA; MtfA peptidase
D      NKI27_14315 DegQ family serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      NKI27_15825 D-alanyl-D-alanine carboxypeptidase	K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D      NKI27_11290 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP	K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D      NKI27_11280 lon; endopeptidase La	K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D      NKI27_12160 lexA; transcriptional repressor LexA	K01356 lexA; repressor LexA [EC:3.4.21.88]
D      NKI27_07090 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit	K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D      NKI27_07305 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit	K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D      NKI27_14300 lepB; signal peptidase I	K03100 lepB; signal peptidase I [EC:3.4.21.89]
D      NKI27_17190 pip; prolyl aminopeptidase	K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D      NKI27_12610 carboxy terminal-processing peptidase	K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D      NKI27_11475 S49 family peptidase	K04773 sppA; protease IV [EC:3.4.21.-]
D      NKI27_09170 sohB; protease SohB	K04774 sohB; serine protease SohB [EC:3.4.21.-]
D      NKI27_17000 hslV; ATP-dependent protease subunit HslV	K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D      NKI27_03945 ggt; gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      NKI27_13340 U32 family peptidase	K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D      NKI27_18090 yegQ; tRNA 5-hydroxyuridine modification protein YegQ	K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D      NKI27_13420 U32 family peptidase	K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D      NKI27_13425 U32 family peptidase	K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D      NKI27_04390 hflC; protease modulator HflC	K04087 hflC; modulator of FtsH protease HflC
D      NKI27_04385 hflK; FtsH protease activity modulator HflK	K04088 hflK; modulator of FtsH protease HflK
C    01003 Glycosyltransferases [BR:alkm01003]
D      NKI27_17730 mrcB; penicillin-binding protein 1B	K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D      NKI27_16505 penicillin-binding protein 1A	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      NKI27_00785 glycosyltransferase family 2 protein	K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D      NKI27_05020 glycosyl transferase	K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C    01005 Lipopolysaccharide biosynthesis proteins [BR:alkm01005]
D      NKI27_13505 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D      NKI27_13500 lpxB; lipid-A-disaccharide synthase	K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D      NKI27_15790 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase	K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D      NKI27_16010 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase	K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D      NKI27_13515 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D      NKI27_11340 UDP-2,3-diacylglucosamine diphosphatase	K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D      NKI27_09535 lpxK; tetraacyldisaccharide 4'-kinase	K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D      NKI27_17095 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D      NKI27_06305 kdsA; 3-deoxy-8-phosphooctulonate synthase	K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D      NKI27_09545 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase	K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D      NKI27_14170 KpsF/GutQ family sugar-phosphate isomerase	K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D      NKI27_16110 SIS domain-containing protein	K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D      NKI27_13775 glycosyltransferase family 2 protein	K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C    01011 Peptidoglycan biosynthesis and degradation proteins [BR:alkm01011]
D      NKI27_14130 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      NKI27_09555 murB; UDP-N-acetylmuramate dehydrogenase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      NKI27_16035 murC; UDP-N-acetylmuramate--L-alanine ligase	K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D      NKI27_16050 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      NKI27_16065 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      NKI27_16030 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      NKI27_03885 alr; alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      NKI27_05190 murI; glutamate racemase	K01776 murI; glutamate racemase [EC:5.1.1.3]
D      NKI27_16055 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      NKI27_16040 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D      NKI27_05155 undecaprenyl-diphosphate phosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      NKI27_16330 murJ; murein biosynthesis integral membrane protein MurJ	K03980 murJ; putative peptidoglycan lipid II flippase
D      NKI27_16505 penicillin-binding protein 1A	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      NKI27_17730 mrcB; penicillin-binding protein 1B	K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D      NKI27_15845 mrdA; penicillin-binding protein 2	K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D      NKI27_16070 penicillin-binding transpeptidase domain-containing protein	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      NKI27_15825 D-alanyl-D-alanine carboxypeptidase	K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D      NKI27_10880 M23 family metallopeptidase	K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D      NKI27_02165 class GN sortase	K07284 srtA; sortase A [EC:3.4.22.70]
D      NKI27_15835 mltB; lytic murein transglycosylase B	K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D      NKI27_09140 LysM peptidoglycan-binding domain-containing protein	K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D      NKI27_00135 mltF; membrane-bound lytic murein transglycosylase MltF	K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D      NKI27_12580 mltF; membrane-bound lytic murein transglycosylase MltF	K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D      NKI27_11425 mltG; endolytic transglycosylase MltG	K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D      NKI27_04360 N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      NKI27_13065 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C    01004 Lipid biosynthesis proteins [BR:alkm01004]
D      NKI27_11450 fabD; ACP S-malonyltransferase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      NKI27_13460 beta-ketoacyl-ACP synthase I	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      NKI27_11435 fabF; beta-ketoacyl-ACP synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      NKI27_06670 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_11445 fabG; 3-oxoacyl-ACP reductase FabG	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_13295 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      NKI27_13465 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D      NKI27_13510 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      NKI27_09105 enoyl-ACP reductase	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      NKI27_13455 trans-2-enoyl-CoA reductase family protein	K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D      NKI27_12300 arylesterase	K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D      NKI27_16685 acyl-CoA thioesterase II	K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D      NKI27_16870 acyl-CoA thioesterase	K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D      NKI27_14375 acyl-CoA thioesterase	K12500 tesC; thioesterase III [EC:3.1.2.-]
D      NKI27_00130 fatty acid desaturase	K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D      NKI27_08545 acyl-CoA desaturase	K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D      NKI27_00965 acyl-CoA desaturase	K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D      NKI27_03260 fatty acid desaturase	K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D      NKI27_05235 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      NKI27_10775 propionyl-CoA synthetase	K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D      NKI27_10190 acetoacetate--CoA ligase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      NKI27_03175 long-chain-acyl-CoA synthetase	K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-]
D      NKI27_08800 AMP-binding protein	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      NKI27_05170 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB	K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D      NKI27_11455 plsX; phosphate acyltransferase PlsX	K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D      NKI27_17820 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      NKI27_01900 1-acylglycerol-3-phosphate O-acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C    01008 Polyketide biosynthesis proteins [BR:alkm01008]
D      NKI27_10730 alpha-hydroxy-acid oxidizing protein	K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C    01006 Prenyltransferases [BR:alkm01006]
D      NKI27_15960 ispA; (2E,6E)-farnesyl diphosphate synthase	K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D      NKI27_16360 ispB; octaprenyl diphosphate synthase	K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D      NKI27_13545 uppS; polyprenyl diphosphate synthase	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D      NKI27_04370 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D      NKI27_15605 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D      NKI27_16715 ubiA; 4-hydroxybenzoate octaprenyltransferase	K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D      NKI27_18990 cyoE; heme o synthase	K02257 COX10; heme o synthase [EC:2.5.1.141]
C    01007 Amino acid related enzymes [BR:alkm01007]
D      NKI27_11605 gltX; glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      NKI27_11330 glutamine--tRNA ligase/YqeY domain fusion protein	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D      NKI27_17770 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS	K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D      NKI27_17665 tyrS; tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      NKI27_08440 tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      NKI27_18875 trpS; tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      NKI27_11325 cysS; cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      NKI27_16990 argS; arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      NKI27_06425 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      NKI27_16320 ileS; isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      NKI27_13020 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      NKI27_04935 leuS; leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      NKI27_14365 lysS; lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      NKI27_07595 aspS; aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      NKI27_18835 asnS; asparagine--tRNA ligase	K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D      NKI27_08265 hisS; histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      NKI27_19140 glyQ; glycine--tRNA ligase subunit alpha	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D      NKI27_19145 glyS; glycine--tRNA ligase subunit beta	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D      NKI27_09070 serS; serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      NKI27_07540 proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      NKI27_06860 thrS; threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      NKI27_12975 alaS; alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      NKI27_06880 pheS; phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      NKI27_06885 pheT; phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      NKI27_12370 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      NKI27_06490 valine--pyruvate transaminase	K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D      NKI27_11095 pyridoxal phosphate-dependent aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      NKI27_13580 dapC; succinyldiaminopimelate transaminase	K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D      NKI27_07245 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      NKI27_12415 hisC; histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      NKI27_04880 bioF; 8-amino-7-oxononanoate synthase	K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D      NKI27_04455 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      NKI27_14450 aspartate aminotransferase family protein	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      NKI27_17315 ectB; diaminobutyrate--2-oxoglutarate transaminase	K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D      NKI27_17720 hemL; glutamate-1-semialdehyde 2,1-aminomutase	K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D      NKI27_15820 dat; D-amino-acid transaminase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      NKI27_12425 serC; 3-phosphoserine/phosphohydroxythreonine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      NKI27_18490 phosphoserine transaminase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      NKI27_13890 DegT/DnrJ/EryC1/StrS family aminotransferase	K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D      NKI27_13720 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase	K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C    00199 Cytochrome P450
C    00194 Photosynthesis proteins [BR:alkm00194]
D      NKI27_00085 F0F1 ATP synthase subunit epsilon	K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D      NKI27_00080 atpD; F0F1 ATP synthase subunit beta	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      NKI27_00075 atpG; F0F1 ATP synthase subunit gamma	K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D      NKI27_00070 atpA; F0F1 ATP synthase subunit alpha	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      NKI27_00065 F0F1 ATP synthase subunit delta	K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D      NKI27_00060 F0F1 ATP synthase subunit B	K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D      NKI27_00055 atpE; F0F1 ATP synthase subunit C	K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D      NKI27_00050 atpB; F0F1 ATP synthase subunit A	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      NKI27_00045 F0F1 ATP synthase subunit I	K02116 atpI; ATP synthase protein I
B
B  09182 Protein families: genetic information processing
C    03000 Transcription factors [BR:alkm03000]
D      NKI27_01070 methylated-DNA--[protein]-cysteine S-methyltransferase	K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D      NKI27_16735 ilvY; HTH-type transcriptional activator IlvY	K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D      NKI27_00480 LysR family transcriptional regulator	K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D      NKI27_17945 LysR substrate-binding domain-containing protein	K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D      NKI27_00700 LysR family transcriptional regulator ArgP	K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D      NKI27_08850 cysB; HTH-type transcriptional regulator CysB	K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D      NKI27_15565 LysR family transcriptional regulator	K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator
D      NKI27_04230 LysR family transcriptional regulator	K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D      NKI27_15140 LysR family transcriptional regulator	K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D      NKI27_14470 DeoR/GlpR family transcriptional regulator	K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D      NKI27_02720 slmA; nucleoid occlusion factor SlmA	K05501 slmA; TetR/AcrR family transcriptional regulator
D      NKI27_07580 fabR; HTH-type transcriptional repressor FabR	K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D      NKI27_15090 TetR/AcrR family transcriptional regulator	K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D      NKI27_18745 Lrp/AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      NKI27_11065 MarR family transcriptional regulator	K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D      NKI27_03545 fur; ferric iron uptake transcriptional regulator	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D      NKI27_16880 crp; cAMP-activated global transcriptional regulator CRP	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      NKI27_03895 fnr; fumarate/nitrate reduction transcriptional regulator Fnr	K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D      NKI27_13440 Crp/Fnr family transcriptional regulator	K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D      NKI27_08230 iscR; Fe-S cluster assembly transcriptional regulator IscR	K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D      NKI27_08645 Rrf2 family transcriptional regulator	K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D      NKI27_00535 metalloregulator ArsR/SmtB family transcription factor	K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D      NKI27_17615 biotin--[acetyl-CoA-carboxylase] ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D      NKI27_12920 sigma-54 dependent transcriptional regulator	K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D      NKI27_04075 helix-turn-helix transcriptional regulator	K07727 K07727; putative transcriptional regulator
D      NKI27_11865 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D      NKI27_02970 NosR/NirI family protein	K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D      NKI27_07280 BolA/IbaG family iron-sulfur metabolism protein	K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D      NKI27_00040 ParB/RepB/Spo0J family partition protein	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D      NKI27_07690 glycine cleavage system protein R	K03567 gcvR; glycine cleavage system transcriptional repressor
D      NKI27_13240 rnk; nucleoside diphosphate kinase regulator	K06140 rnk; regulator of nucleoside diphosphate kinase
D      NKI27_01985 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D      NKI27_09295 AlpA family transcriptional regulator	K07733 alpA; prophage regulatory protein
D      NKI27_17870 AlpA family transcriptional regulator	K07733 alpA; prophage regulatory protein
D      NKI27_01975 YqgE/AlgH family protein	K07735 algH; putative transcriptional regulator
D      NKI27_17765 dksA; RNA polymerase-binding protein DksA	K06204 dksA; RNA polymerase-binding transcription factor
D      NKI27_16415 nrdR; transcriptional regulator NrdR	K07738 nrdR; transcriptional repressor NrdR
D      NKI27_16085 mraZ; division/cell wall cluster transcriptional repressor MraZ	K03925 mraZ; transcriptional regulator MraZ
C    03021 Transcription machinery [BR:alkm03021]
D      NKI27_17385 rpoA; DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      NKI27_17545 rpoB; DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      NKI27_17540 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      NKI27_17845 rpoD; RNA polymerase sigma factor RpoD	K03086 rpoD; RNA polymerase primary sigma factor
D      NKI27_06355 rpoS; RNA polymerase sigma factor RpoS	K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D      NKI27_08535 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      NKI27_14335 rpoE; RNA polymerase sigma factor RpoE	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      NKI27_02090 rpoH; RNA polymerase sigma factor RpoH	K03089 rpoH; RNA polymerase sigma-32 factor
D      NKI27_14190 RNA polymerase factor sigma-54	K03092 rpoN; RNA polymerase sigma-54 factor
D      NKI27_12765 RNA polymerase sigma factor FliA	K02405 fliA; RNA polymerase sigma factor FliA
D      NKI27_18500 rapA; RNA polymerase-associated protein RapA	K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D      NKI27_03635 nusA; transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA
D      NKI27_16390 nusB; transcription antitermination factor NusB	K03625 nusB; transcription antitermination protein NusB
D      NKI27_17570 nusG; transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG
D      NKI27_16120 sspA; stringent starvation protein A	K03599 sspA; stringent starvation protein A
D      NKI27_16115 ClpXP protease specificity-enhancing factor	K03600 sspB; stringent starvation protein B
D      NKI27_10135 SpoIIE family protein phosphatase	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D      NKI27_17765 dksA; RNA polymerase-binding protein DksA	K06204 dksA; RNA polymerase-binding transcription factor
D      NKI27_03585 greA; transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA
D      NKI27_02120 greB; transcription elongation factor GreB	K04760 greB; transcription elongation factor GreB
D      NKI27_01485 rho; transcription termination factor Rho	K03628 rho; transcription termination factor Rho
C    03019 Messenger RNA biogenesis [BR:alkm03019]
D      NKI27_11490 rne; ribonuclease E	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      NKI27_14235 rng; ribonuclease G	K08301 rng; ribonuclease G [EC:3.1.26.-]
D      NKI27_14290 rnc; ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      NKI27_03850 rnr; ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      NKI27_19170 rnr; ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      NKI27_04340 orn; oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-]
D      NKI27_11125 rhlB; ATP-dependent RNA helicase RhlB	K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D      NKI27_14880 DEAD/DEAH box helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      NKI27_14980 DEAD/DEAH box helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      NKI27_15270 DEAD/DEAH box helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      NKI27_18395 DEAD/DEAH box helicase	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      NKI27_03325 RecQ family ATP-dependent DNA helicase	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      NKI27_07095 recQ; DNA helicase RecQ	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      NKI27_06310 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      NKI27_03660 pnp; polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D      NKI27_01485 rho; transcription termination factor Rho	K03628 rho; transcription termination factor Rho
D      NKI27_03560 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      NKI27_06685 groL; chaperonin GroEL	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      NKI27_04375 hfq; RNA chaperone Hfq	K03666 hfq; host factor-I protein
D      NKI27_16575 ppk1; polyphosphate kinase 1	K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D      NKI27_17785 pcnB; polynucleotide adenylyltransferase PcnB	K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D      NKI27_17025 RNA pyrophosphohydrolase	K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D      NKI27_12965 csrA; carbon storage regulator CsrA	K03563 csrA; carbon storage regulator
D      NKI27_11530 rraA; ribonuclease E activity regulator RraA	K02553 rraA; regulator of ribonuclease activity A
D      NKI27_14205 rapZ; RNase adapter RapZ	K06958 rapZ; RNase adapter protein RapZ
D      NKI27_08805 hrpA; ATP-dependent RNA helicase HrpA	K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D      NKI27_13135 hrpB; ATP-dependent helicase HrpB	K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C    03041 Spliceosome
C    03011 Ribosome [BR:alkm03011]
D      NKI27_12400 rpsA; 30S ribosomal protein S1	K02945 RP-S1; small subunit ribosomal protein S1
D      NKI27_13565 rpsB; 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      NKI27_17480 rpsC; 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      NKI27_17390 rpsD; 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      NKI27_17425 rpsE; 30S ribosomal protein S5	K02988 RP-S5; small subunit ribosomal protein S5
D      NKI27_03860 rpsF; 30S ribosomal protein S6	K02990 RP-S6; small subunit ribosomal protein S6
D      NKI27_17530 rpsG; 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      NKI27_17440 rpsH; 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      NKI27_16140 rpsI; 30S ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      NKI27_17515 rpsJ; 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      NKI27_17395 rpsK; 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      NKI27_17535 rpsL; 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      NKI27_17400 rpsM; 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      NKI27_17445 rpsN; 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      NKI27_03655 rpsO; 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      NKI27_14415 rpsP; 30S ribosomal protein S16	K02959 RP-S16; small subunit ribosomal protein S16
D      NKI27_17465 rpsQ; 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      NKI27_03865 rpsR; 30S ribosomal protein S18	K02963 RP-S18; small subunit ribosomal protein S18
D      NKI27_17490 rpsS; 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      NKI27_16335 rpsT; 30S ribosomal protein S20	K02968 RP-S20; small subunit ribosomal protein S20
D      NKI27_17830 rpsU; 30S ribosomal protein S21	K02970 RP-S21; small subunit ribosomal protein S21
D      NKI27_17560 rplA; 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      NKI27_17495 rplB; 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      NKI27_17510 rplC; 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      NKI27_17505 rplD; 50S ribosomal protein L4	K02926 RP-L4; large subunit ribosomal protein L4
D      NKI27_17450 rplE; 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      NKI27_17435 rplF; 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      NKI27_03875 rplI; 50S ribosomal protein L9	K02939 RP-L9; large subunit ribosomal protein L9
D      NKI27_17555 rplJ; 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      NKI27_17565 rplK; 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      NKI27_17550 rplL; 50S ribosomal protein L7/L12	K02935 RP-L7; large subunit ribosomal protein L7/L12
D      NKI27_16145 rplM; 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      NKI27_17460 rplN; 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      NKI27_17415 rplO; 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      NKI27_17475 rplP; 50S ribosomal protein L16	K02878 RP-L16; large subunit ribosomal protein L16
D      NKI27_17380 rplQ; 50S ribosomal protein L17	K02879 RP-L17; large subunit ribosomal protein L17
D      NKI27_17430 rplR; 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      NKI27_14400 rplS; 50S ribosomal protein L19	K02884 RP-L19; large subunit ribosomal protein L19
D      NKI27_06875 rplT; 50S ribosomal protein L20	K02887 RP-L20; large subunit ribosomal protein L20
D      NKI27_16355 rplU; 50S ribosomal protein L21	K02888 RP-L21; large subunit ribosomal protein L21
D      NKI27_17485 rplV; 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      NKI27_17500 rplW; 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      NKI27_17455 rplX; 50S ribosomal protein L24	K02895 RP-L24; large subunit ribosomal protein L24
D      NKI27_16350 rpmA; 50S ribosomal protein L27	K02899 RP-L27; large subunit ribosomal protein L27
D      NKI27_16960 rpmB; 50S ribosomal protein L28	K02902 RP-L28; large subunit ribosomal protein L28
D      NKI27_17470 rpmC; 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      NKI27_17420 rpmD; 50S ribosomal protein L30	K02907 RP-L30; large subunit ribosomal protein L30
D      NKI27_16980 rpmE; 50S ribosomal protein L31	K02909 RP-L31; large subunit ribosomal protein L31
D      NKI27_11460 rpmF; 50S ribosomal protein L32	K02911 RP-L32; large subunit ribosomal protein L32
D      NKI27_16965 rpmG; 50S ribosomal protein L33	K02913 RP-L33; large subunit ribosomal protein L33
D      NKI27_19260 rpmH; 50S ribosomal protein L34	K02914 RP-L34; large subunit ribosomal protein L34
D      NKI27_06870 rpmI; 50S ribosomal protein L35	K02916 RP-L35; large subunit ribosomal protein L35
D      NKI27_17405 rpmJ; 50S ribosomal protein L36	K02919 RP-L36; large subunit ribosomal protein L36
D      NKI27_04170 50S ribosomal protein L25/general stress protein Ctc	K02897 RP-L25; large subunit ribosomal protein L25
D      NKI27_04505 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
C    03009 Ribosome biogenesis [BR:alkm03009]
D      NKI27_14290 rnc; ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      NKI27_11935 serine protein kinase RIO	K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D      NKI27_04340 orn; oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-]
D      NKI27_14285 era; GTPase Era	K03595 era; GTPase
D      NKI27_16345 cgtA; Obg family GTPase CgtA	K03979 obgE; GTPase [EC:3.6.5.-]
D      NKI27_17765 dksA; RNA polymerase-binding protein DksA	K06204 dksA; RNA polymerase-binding transcription factor
D      NKI27_03635 nusA; transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA
D      NKI27_16390 nusB; transcription antitermination factor NusB	K03625 nusB; transcription antitermination protein NusB
D      NKI27_17570 nusG; transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG
D      NKI27_14875 pseudouridine synthase	K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D      NKI27_15745 pseudouridine synthase	K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D      NKI27_15765 pseudouridine synthase	K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D      NKI27_02695 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D      NKI27_19110 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D      NKI27_11830 methyltransferase	K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D      NKI27_02070 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D      NKI27_15355 16S rRNA (uracil(1498)-N(3))-methyltransferase	K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D      NKI27_00030 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D      NKI27_16080 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D      NKI27_16095 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase	K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D      NKI27_05165 class I SAM-dependent methyltransferase	K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D      NKI27_03855 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D      NKI27_03595 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE	K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D      NKI27_14900 rlmF; 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF	K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D      NKI27_11760 methyltransferase	K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D      NKI27_15850 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D      NKI27_11105 class I SAM-dependent methyltransferase	K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D      NKI27_17040 class I SAM-dependent rRNA methyltransferase	K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D      NKI27_02440 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D      NKI27_12340 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D      NKI27_11150 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM	K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D      NKI27_08245 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D      NKI27_05090 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D      NKI27_11035 pseudouridine synthase	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      NKI27_11845 TIGR01621 family pseudouridine synthase	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      NKI27_16765 pseudouridine synthase	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      NKI27_08455 pseudouridine synthase	K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D      NKI27_11485 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC	K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D      NKI27_16235 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D      NKI27_09435 pseudouridine synthase	K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D      NKI27_15235 rluF; 23S rRNA pseudouridine(2604) synthase RluF	K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D      NKI27_16170 rimI; ribosomal protein S18-alanine N-acetyltransferase	K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D      NKI27_15150 rimK; 30S ribosomal protein S6--L-glutamate ligase	K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D      NKI27_14410 rimM; ribosome maturation factor RimM	K02860 rimM; 16S rRNA processing protein RimM
D      NKI27_05070 rimO; 30S ribosomal protein S12 methylthiotransferase RimO	K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D      NKI27_02910 prmA; 50S ribosomal protein L11 methyltransferase	K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D      NKI27_08945 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase	K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D      NKI27_09410 cupin domain-containing protein	K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D      NKI27_11490 rne; ribonuclease E	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      NKI27_14235 rng; ribonuclease G	K08301 rng; ribonuclease G [EC:3.1.26.-]
D      NKI27_01980 ruvX; Holliday junction resolvase RuvX	K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D      NKI27_05005 dbpA; ATP-dependent RNA helicase DbpA	K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D      NKI27_18395 DEAD/DEAH box helicase	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      NKI27_04335 rsgA; small ribosomal subunit biogenesis GTPase RsgA	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D      NKI27_18720 ylqF; ribosome biogenesis GTPase YlqF	K14540 rbgA; ribosome biogenesis GTPase A
D      NKI27_04380 hflX; GTPase HflX	K03665 hflX; GTPase
D      NKI27_10615 hflX; GTPase HflX	K03665 hflX; GTPase
D      NKI27_19085 L-threonylcarbamoyladenylate synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      NKI27_17960 RelA/SpoT family protein	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D      NKI27_03645 rbfA; 30S ribosome-binding factor RbfA	K02834 rbfA; ribosome-binding factor A
D      NKI27_03630 rimP; ribosome maturation factor RimP	K09748 rimP; ribosome maturation factor RimP
D      NKI27_15855 rsfS; ribosome silencing factor	K09710 ybeB; ribosome-associated protein
D      NKI27_04955 ybeY; rRNA maturation RNase YbeY	K07042 ybeY; probable rRNA maturation factor
D      NKI27_03590 yhbY; ribosome assembly RNA-binding protein YhbY	K07574 yhbY; RNA-binding protein
D      NKI27_15620 YibL family ribosome-associated protein	K14762 yibL; ribosome-associated protein
D      NKI27_14220 DUF615 domain-containing protein	K09889 yjgA; ribosome-associated protein
D      NKI27_12345 rmf; ribosome modulation factor	K03812 rmf; ribosome modulation factor
D      NKI27_14195 hpf; ribosome hibernation promoting factor	K05808 hpf; ribosome hibernation promoting factor
D      NKI27_04160 ychF; redox-regulated ATPase YchF	K06942 ychF; ribosome-binding ATPase
C    03016 Transfer RNA biogenesis [BR:alkm03016]
D      NKI27_04635 multifunctional CCA addition/repair protein	K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D      NKI27_11605 gltX; glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      NKI27_07540 proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      NKI27_16320 ileS; isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      NKI27_04935 leuS; leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      NKI27_06425 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      NKI27_11330 glutamine--tRNA ligase/YqeY domain fusion protein	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D      NKI27_16990 argS; arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      NKI27_14365 lysS; lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      NKI27_07595 aspS; aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      NKI27_12975 alaS; alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      NKI27_18835 asnS; asparagine--tRNA ligase	K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D      NKI27_06860 thrS; threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      NKI27_09070 serS; serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      NKI27_11325 cysS; cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      NKI27_13020 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      NKI27_08265 hisS; histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      NKI27_06880 pheS; phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      NKI27_06885 pheT; phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      NKI27_17665 tyrS; tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      NKI27_08440 tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      NKI27_18875 trpS; tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      NKI27_17185 dtd; D-aminoacyl-tRNA deacylase	K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D      NKI27_16820 histidine triad nucleotide-binding protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      NKI27_14015 HIT family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      NKI27_18170 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB	K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D      NKI27_14030 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D      NKI27_09000 truA; tRNA pseudouridine(38-40) synthase TruA	K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D      NKI27_03650 truB; tRNA pseudouridine(55) synthase TruB	K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D      NKI27_03420 cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      NKI27_08235 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      NKI27_19085 L-threonylcarbamoyladenylate synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      NKI27_04370 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D      NKI27_15605 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D      NKI27_00010 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D      NKI27_00025 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D      NKI27_12095 selD; selenide, water dikinase SelD	K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D      NKI27_02055 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ	K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D      NKI27_19265 rnpA; ribonuclease P protein component	K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D      NKI27_16090 rnpB; RNase P RNA component class A	K01978 rnpB; M1 RNA
D      NKI27_12480 rnt; ribonuclease T	K03683 rnt; ribonuclease T [EC:3.1.13.-]
D      NKI27_17985 rph; ribonuclease PH	K00989 rph; ribonuclease PH [EC:2.7.7.56]
D      NKI27_16425 ettA; energy-dependent translational throttle protein EttA	K06020 ettA; energy-dependent translational throttle protein EttA
D      NKI27_19140 glyQ; glycine--tRNA ligase subunit alpha	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D      NKI27_19145 glyS; glycine--tRNA ligase subunit beta	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D      NKI27_17770 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS	K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D      NKI27_00690 ybaK; Cys-tRNA(Pro) deacylase	K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D      NKI27_16810 YbaK/EbsC family protein	K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D      NKI27_07560 tadA; tRNA adenosine(34) deaminase TadA	K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D      NKI27_11630 dusA; tRNA dihydrouridine(20/20a) synthase DusA	K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D      NKI27_02900 dusB; tRNA dihydrouridine synthase DusB	K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D      NKI27_11750 tRNA-dihydrouridine synthase	K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D      NKI27_04415 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA	K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D      NKI27_04410 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D      NKI27_11825 methyltransferase domain-containing protein	K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D      NKI27_15000 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA	K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D      NKI27_14405 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD	K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D      NKI27_04975 trmH; tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D      NKI27_08220 RNA methyltransferase	K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D      NKI27_04620 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL	K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D      NKI27_11855 pseudouridine synthase	K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D      NKI27_11035 pseudouridine synthase	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      NKI27_11845 TIGR01621 family pseudouridine synthase	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      NKI27_16765 pseudouridine synthase	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      NKI27_09425 mnmA; tRNA 2-thiouridine(34) synthase MnmA	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D      NKI27_11230 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA	K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D      NKI27_11140 tusA; sulfurtransferase TusA	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      NKI27_09220 tusB; sulfurtransferase complex subunit TusB	K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D      NKI27_09230 tusD; sulfurtransferase complex subunit TusD	K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D      NKI27_09215 TusE/DsrC/DsvC family sulfur relay protein	K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D      NKI27_15460 iron-sulfur cluster assembly accessory protein	K13628 iscA; iron-sulfur cluster assembly protein
D      NKI27_11345 tRNA-(ms[2]io[6]A)-hydroxylase	K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D      NKI27_08190 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D      NKI27_18930 queC; 7-cyano-7-deazaguanine synthase QueC	K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D      NKI27_18925 queE; 7-carboxy-7-deazaguanine synthase	K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D      NKI27_08065 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D      NKI27_04345 queG; tRNA epoxyqueuosine(34) reductase QueG	K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D      NKI27_16780 mnmH; tRNA 2-selenouridine(34) synthase MnmH	K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D      NKI27_08195 tgt; tRNA guanosine(34) transglycosylase Tgt	K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D      NKI27_02295 thiI; tRNA 4-thiouridine(8) synthase ThiI	K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D      NKI27_05150 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D      NKI27_17825 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D      NKI27_04355 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D      NKI27_18255 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D      NKI27_03850 rnr; ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      NKI27_19170 rnr; ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      NKI27_03660 pnp; polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C    03012 Translation factors [BR:alkm03012]
D      NKI27_12150 translation initiation factor Sui1	K03113 EIF1; translation initiation factor 1
D      NKI27_03640 infB; translation initiation factor IF-2	K02519 infB; translation initiation factor IF-2
D      NKI27_06865 infC; translation initiation factor IF-3	K02520 infC; translation initiation factor IF-3
D      NKI27_01395 ATP-binding cassette domain-containing protein	K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D      NKI27_13560 tsf; translation elongation factor Ts	K02357 tsf; elongation factor Ts
D      NKI27_17520 tuf; elongation factor Tu	K02358 tuf; elongation factor Tu
D      NKI27_02740 fusA; elongation factor G	K02355 fusA; elongation factor G
D      NKI27_17525 fusA; elongation factor G	K02355 fusA; elongation factor G
D      NKI27_04205 prfA; peptide chain release factor 1	K02835 prfA; peptide chain release factor 1
D      NKI27_13550 frr; ribosome recycling factor	K02838 frr; ribosome recycling factor
D      NKI27_04210 prmC; peptide chain release factor N(5)-glutamine methyltransferase	K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D      NKI27_04165 pth; aminoacyl-tRNA hydrolase	K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D      NKI27_09455 infA; translation initiation factor IF-1	K02518 infA; translation initiation factor IF-1
D      NKI27_04300 efp; elongation factor P	K02356 efp; elongation factor P
D      NKI27_04690 yeiP; elongation factor P-like protein YeiP	K02356 efp; elongation factor P
D      NKI27_04305 epmA; EF-P lysine aminoacylase EpmA	K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D      NKI27_04295 epmB; EF-P beta-lysylation protein EpmB	K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D      NKI27_11130 elongation factor P hydroxylase	K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D      NKI27_14370 prfB; peptide chain release factor 2	K02836 prfB; peptide chain release factor 2
D      NKI27_16155 prfC; peptide chain release factor 3	K02837 prfC; peptide chain release factor 3
D      NKI27_15770 arfB; aminoacyl-tRNA hydrolase	K15034 yaeJ; ribosome-associated protein
C    03110 Chaperones and folding catalysts [BR:alkm03110]
D      NKI27_09450 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA	K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D      NKI27_16225 clpB; ATP-dependent chaperone ClpB	K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D      NKI27_11285 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX	K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D      NKI27_17005 hslU; HslU--HslV peptidase ATPase subunit	K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D      NKI27_12200 htpG; molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
D      NKI27_03560 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      NKI27_01100 yegD; molecular chaperone	K04046 yegD; hypothetical chaperone protein
D      NKI27_06685 groL; chaperonin GroEL	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      NKI27_03565 dnaJ; molecular chaperone DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      NKI27_14765 DnaJ domain-containing protein	K05516 cbpA; curved DNA-binding protein
D      NKI27_02095 djlA; co-chaperone DjlA	K05801 djlA; DnaJ like chaperone protein
D      NKI27_02040 hslO; Hsp33 family molecular chaperone HslO	K04083 hslO; molecular chaperone Hsp33
D      NKI27_03555 grpE; nucleotide exchange factor GrpE	K03687 GRPE; molecular chaperone GrpE
D      NKI27_01065 Hsp20 family protein	K04080 ibpA; molecular chaperone IbpA
D      NKI27_02045 hslR; ribosome-associated heat shock protein Hsp15	K04762 hslR; ribosome-associated heat shock protein Hsp15
D      NKI27_06680 co-chaperone GroES	K04078 groES; chaperonin GroES
D      NKI27_14315 DegQ family serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      NKI27_03600 ftsH; ATP-dependent zinc metalloprotease FtsH	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      NKI27_00050 atpB; F0F1 ATP synthase subunit A	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      NKI27_04615 secB; protein-export chaperone SecB	K03071 secB; preprotein translocase subunit SecB
D      NKI27_08490 peptidylprolyl isomerase	K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D      NKI27_11335 peptidylprolyl isomerase	K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D      NKI27_00695 FKBP-type peptidyl-prolyl cis-trans isomerase	K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D      NKI27_01380 FKBP-type peptidyl-prolyl cis-trans isomerase	K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D      NKI27_18655 FKBP-type peptidyl-prolyl cis-trans isomerase	K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D      NKI27_18810 FKBP-type peptidyl-prolyl cis-trans isomerase	K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D      NKI27_16310 peptidylprolyl isomerase	K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D      NKI27_14490 peptidylprolyl isomerase	K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D      NKI27_18405 peptidylprolyl isomerase	K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D      NKI27_18685 peptidylprolyl isomerase	K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D      NKI27_05000 peptidylprolyl isomerase	K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D      NKI27_13150 peptidyl-prolyl cis-trans isomerase	K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D      NKI27_02685 peptidylprolyl isomerase	K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D      NKI27_01410 trxA; thioredoxin TrxA	K03671 TXN; thioredoxin
D      NKI27_02575 trxC; thioredoxin TrxC	K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D      NKI27_15520 GrxA family glutaredoxin	K03674 grxA; glutaredoxin 1
D      NKI27_04610 grxC; glutaredoxin 3	K03676 grxC; glutaredoxin 3
D      NKI27_14445 grxD; Grx4 family monothiol glutaredoxin	K07390 grxD; monothiol glutaredoxin
D      NKI27_16515 thiol:disulfide interchange protein DsbA/DsbL	K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D      NKI27_01365 disulfide bond formation protein B	K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D      NKI27_14395 DsbC family protein	K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D      NKI27_11135 dsbD; protein-disulfide reductase DsbD	K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D      NKI27_12660 DsbE family thiol:disulfide interchange protein	K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C    04131 Membrane trafficking [BR:alkm04131]
D      NKI27_08240 ndk; nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      NKI27_01285 TMEM165/GDT1 family protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      NKI27_11695 glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      NKI27_12200 htpG; molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
C    04121 Ubiquitin system
C    03051 Proteasome [BR:alkm03051]
D      NKI27_12200 htpG; molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
C    03032 DNA replication proteins [BR:alkm03032]
D      NKI27_02010 HU family DNA-binding protein	K05787 hupA; DNA-binding protein HU-alpha
D      NKI27_11275 hupB; DNA-binding protein HU-beta	K03530 hupB; DNA-binding protein HU-beta
D      NKI27_06890 ihfA; integration host factor subunit alpha	K04764 ihfA; integration host factor subunit alpha
D      NKI27_12395 integration host factor subunit beta	K05788 ihfB; integration host factor subunit beta
D      NKI27_19255 dnaA; chromosomal replication initiator protein DnaA	K02313 dnaA; chromosomal replication initiator protein
D      NKI27_03880 dnaB; replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      NKI27_17840 dnaG; DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      NKI27_17365 ssb; single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NKI27_06285 dnaE; DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      NKI27_19250 dnaN; DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      NKI27_13010 DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      NKI27_04925 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      NKI27_00280 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_03785 exonuclease domain-containing protein	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_06130 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_09155 dnaQ; DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_08680 dnaX; DNA polymerase III subunit gamma/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      NKI27_13495 rnhB; ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      NKI27_18105 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NKI27_08480 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      NKI27_13105 hda; DnaA regulatory inactivator Hda	K10763 hda; DnaA-homolog protein
D      NKI27_12430 gyrA; DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      NKI27_19230 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      NKI27_04275 parC; DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      NKI27_15060 parE; DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      NKI27_08385 topA; type I DNA topoisomerase	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D      NKI27_07275 DNA topoisomerase 3	K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D      NKI27_10795 DNA topoisomerase III	K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C    03036 Chromosome and associated proteins [BR:alkm03036]
D      NKI27_14290 rnc; ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      NKI27_02010 HU family DNA-binding protein	K05787 hupA; DNA-binding protein HU-alpha
D      NKI27_11275 hupB; DNA-binding protein HU-beta	K03530 hupB; DNA-binding protein HU-beta
D      NKI27_06890 ihfA; integration host factor subunit alpha	K04764 ihfA; integration host factor subunit alpha
D      NKI27_12395 integration host factor subunit beta	K05788 ihfB; integration host factor subunit beta
D      NKI27_14765 DnaJ domain-containing protein	K05516 cbpA; curved DNA-binding protein
D      NKI27_14760 chaperone modulator CbpM	K18997 cbpM; chaperone modulatory protein CbpM
D      NKI27_19255 dnaA; chromosomal replication initiator protein DnaA	K02313 dnaA; chromosomal replication initiator protein
D      NKI27_04375 hfq; RNA chaperone Hfq	K03666 hfq; host factor-I protein
D      NKI27_00700 LysR family transcriptional regulator ArgP	K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D      NKI27_18745 Lrp/AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      NKI27_08470 smc; chromosome segregation protein SMC	K03529 smc; chromosome segregation protein
D      NKI27_08445 segregation/condensation protein A	K05896 scpA; segregation and condensation protein A
D      NKI27_08450 scpB; SMC-Scp complex subunit ScpB	K06024 scpB; segregation and condensation protein B
D      NKI27_16020 ftsA; cell division protein FtsA	K03590 ftsA; cell division protein FtsA
D      NKI27_06315 ftsB; cell division protein FtsB	K05589 ftsB; cell division protein FtsB
D      NKI27_02080 ftsE; cell division ATP-binding protein FtsE	K09812 ftsE; cell division transport system ATP-binding protein
D      NKI27_16070 penicillin-binding transpeptidase domain-containing protein	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      NKI27_09050 DNA translocase FtsK 4TM domain-containing protein	K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D      NKI27_16075 ftsL; cell division protein FtsL	K03586 ftsL; cell division protein FtsL
D      NKI27_16045 ftsW; putative lipid II flippase FtsW	K03588 ftsW; cell division protein FtsW
D      NKI27_02085 ftsX; permease-like cell division protein FtsX	K09811 ftsX; cell division transport system permease protein
D      NKI27_16015 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      NKI27_03090 cell division protein ZapA	K09888 zapA; cell division protein ZapA
D      NKI27_03095 TIGR02449 family protein	K09892 zapB; cell division protein ZapB
D      NKI27_14105 zapE; cell division protein ZapE	K06916 zapE; cell division protein ZapE
D      NKI27_14870 zapE; cell division protein ZapE	K06916 zapE; cell division protein ZapE
D      NKI27_04360 N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      NKI27_19160 efflux RND transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      NKI27_04265 minC; septum site-determining protein MinC	K03610 minC; septum site-determining protein MinC
D      NKI27_04260 minD; septum site-determining protein MinD	K03609 minD; septum site-determining protein MinD
D      NKI27_04255 minE; cell division topological specificity factor MinE	K03608 minE; cell division topological specificity factor
D      NKI27_02720 slmA; nucleoid occlusion factor SlmA	K05501 slmA; TetR/AcrR family transcriptional regulator
D      NKI27_14255 rod shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins
D      NKI27_14250 mreC; rod shape-determining protein MreC	K03570 mreC; rod shape-determining protein MreC
D      NKI27_15840 rodA; rod shape-determining protein RodA	K05837 rodA; rod shape determining protein RodA
D      NKI27_00035 AAA family ATPase	K03496 parA; chromosome partitioning protein
D      NKI27_12730 ParA family protein	K03496 parA; chromosome partitioning protein
D      NKI27_13100 ParA family protein	K03496 parA; chromosome partitioning protein
D      NKI27_00040 ParB/RepB/Spo0J family partition protein	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D      NKI27_04275 parC; DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      NKI27_15060 parE; DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      NKI27_00025 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D      NKI27_00030 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D      NKI27_06430 apbC; iron-sulfur cluster carrier protein ApbC	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      NKI27_16525 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC	K03978 engB; GTP-binding protein
C    03400 DNA repair and recombination proteins [BR:alkm03400]
D      NKI27_08540 phrB; deoxyribodipyrimidine photo-lyase	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D      NKI27_14360 ung; uracil-DNA glycosylase	K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D      NKI27_04545 mutY; A/G-specific adenine glycosylase	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D      NKI27_06390 nth; endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      NKI27_15985 Nudix family hydrolase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      NKI27_16945 dut; dUTP diphosphatase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      NKI27_01070 methylated-DNA--[protein]-cysteine S-methyltransferase	K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D      NKI27_02065 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D      NKI27_10125 xthA; exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      NKI27_18065 exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      NKI27_14380 recJ; single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      NKI27_08480 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      NKI27_18105 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NKI27_17375 uvrA; excinuclease ABC subunit UvrA	K03701 uvrA; excinuclease ABC subunit A
D      NKI27_12365 uvrB; excinuclease ABC subunit UvrB	K03702 uvrB; excinuclease ABC subunit B
D      NKI27_09255 uvrC; excinuclease ABC subunit UvrC	K03703 uvrC; excinuclease ABC subunit C
D      NKI27_02470 uvrD; DNA helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      NKI27_17545 rpoB; DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      NKI27_17540 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      NKI27_17385 rpoA; DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      NKI27_11700 mfd; transcription-repair coupling factor	K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D      NKI27_13485 mutS; DNA mismatch repair protein MutS	K03555 mutS; DNA mismatch repair protein MutS
D      NKI27_04365 mutL; DNA mismatch repair endonuclease MutL	K03572 mutL; DNA mismatch repair protein MutL
D      NKI27_12515 sbcB; exodeoxyribonuclease I	K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D      NKI27_07545 xseA; exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      NKI27_15955 exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      NKI27_06285 dnaE; DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      NKI27_19250 dnaN; DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      NKI27_13010 DNA polymerase III subunit chi	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      NKI27_04925 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      NKI27_00280 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_03785 exonuclease domain-containing protein	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_06130 3'-5' exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_09155 dnaQ; DNA polymerase III subunit epsilon	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      NKI27_08680 dnaX; DNA polymerase III subunit gamma/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      NKI27_17365 ssb; single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NKI27_13480 recA; recombinase RecA	K03553 recA; recombination protein RecA
D      NKI27_07605 ruvA; Holliday junction branch migration protein RuvA	K03550 ruvA; holliday junction DNA helicase RuvA
D      NKI27_07610 ruvB; Holliday junction branch migration DNA helicase RuvB	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D      NKI27_07600 ruvC; crossover junction endodeoxyribonuclease RuvC	K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D      NKI27_16985 primosomal protein N'	K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D      NKI27_14965 SMC family ATPase	K03546 sbcC; DNA repair protein SbcC/Rad50
D      NKI27_14960 exonuclease SbcCD subunit D	K03547 sbcD; DNA repair protein SbcD/Mre11
D      NKI27_16435 radA; DNA repair protein RadA	K04485 radA; DNA repair protein RadA/Sms
D      NKI27_19235 recF; DNA replication/repair protein RecF	K03629 recF; DNA replication and repair protein RecF
D      NKI27_17940 recG; ATP-dependent DNA helicase RecG	K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D      NKI27_08690 recR; recombination mediator RecR	K06187 recR; recombination protein RecR
D      NKI27_03550 recN; DNA repair protein RecN	K03631 recN; DNA repair protein RecN (Recombination protein N)
D      NKI27_07465 rdgC; recombination-associated protein RdgC	K03554 rdgC; recombination associated protein RdgC
D      NKI27_14920 DEAD/DEAH box helicase	K19789 radD; DNA repair protein RadD
D      NKI27_12430 gyrA; DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      NKI27_19230 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      NKI27_08385 topA; type I DNA topoisomerase	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D      NKI27_02010 HU family DNA-binding protein	K05787 hupA; DNA-binding protein HU-alpha
D      NKI27_11275 hupB; DNA-binding protein HU-beta	K03530 hupB; DNA-binding protein HU-beta
D      NKI27_06890 ihfA; integration host factor subunit alpha	K04764 ihfA; integration host factor subunit alpha
D      NKI27_12395 integration host factor subunit beta	K05788 ihfB; integration host factor subunit beta
D      NKI27_03325 RecQ family ATP-dependent DNA helicase	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      NKI27_07095 recQ; DNA helicase RecQ	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      NKI27_04270 dinB; DNA polymerase IV	K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D      NKI27_07085 Y-family DNA polymerase	K03502 umuC; DNA polymerase V
D      NKI27_07300 Y-family DNA polymerase	K03502 umuC; DNA polymerase V
D      NKI27_07090 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit	K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D      NKI27_07305 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit	K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D      NKI27_12160 lexA; transcriptional repressor LexA	K01356 lexA; repressor LexA [EC:3.4.21.88]
D      NKI27_14585 DNA polymerase II	K02336 polB; DNA polymerase II [EC:2.7.7.7]
D      NKI27_01850 rep; DNA helicase Rep	K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D      NKI27_08835 dinG; ATP-dependent DNA helicase DinG	K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D      NKI27_04105 DEAD/DEAH box helicase	K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D      NKI27_00485 ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      NKI27_07950 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      NKI27_00490 ribonucleotide-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C    03029 Mitochondrial biogenesis [BR:alkm03029]
D      NKI27_16130 cytochrome bc complex cytochrome b subunit	K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D      NKI27_03640 infB; translation initiation factor IF-2	K02519 infB; translation initiation factor IF-2
D      NKI27_06865 infC; translation initiation factor IF-3	K02520 infC; translation initiation factor IF-3
D      NKI27_13560 tsf; translation elongation factor Ts	K02357 tsf; elongation factor Ts
D      NKI27_17520 tuf; elongation factor Tu	K02358 tuf; elongation factor Tu
D      NKI27_02740 fusA; elongation factor G	K02355 fusA; elongation factor G
D      NKI27_17525 fusA; elongation factor G	K02355 fusA; elongation factor G
D      NKI27_14285 era; GTPase Era	K03595 era; GTPase
D      NKI27_17665 tyrS; tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      NKI27_04935 leuS; leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      NKI27_07595 aspS; aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      NKI27_16990 argS; arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      NKI27_14265 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      NKI27_14270 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      NKI27_14260 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      NKI27_17365 ssb; single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NKI27_13525 bamA; outer membrane protein assembly factor BamA	K07277 SAM50; outer membrane protein insertion porin family
D      NKI27_03560 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      NKI27_03555 grpE; nucleotide exchange factor GrpE	K03687 GRPE; molecular chaperone GrpE
D      NKI27_06685 groL; chaperonin GroEL	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      NKI27_06680 co-chaperone GroES	K04078 groES; chaperonin GroES
D      NKI27_03565 dnaJ; molecular chaperone DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      NKI27_03420 cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      NKI27_08235 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      NKI27_14445 grxD; Grx4 family monothiol glutaredoxin	K07390 grxD; monothiol glutaredoxin
D      NKI27_06430 apbC; iron-sulfur cluster carrier protein ApbC	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      NKI27_18990 cyoE; heme o synthase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      NKI27_19020 cytochrome c oxidase assembly protein	K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D      NKI27_18995 COX15/CtaA family protein	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      NKI27_00005 yidC; membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      NKI27_12200 htpG; molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
B
B  09183 Protein families: signaling and cellular processes
C    02000 Transporters [BR:alkm02000]
D      NKI27_09530 msbA; lipid A export permease/ATP-binding protein MsbA	K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D      NKI27_18015 peptidase domain-containing ABC transporter	K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D      NKI27_12145 ABC transporter ATP-binding protein/permease	K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D      NKI27_00500 ABC transporter ATP-binding protein/permease	K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D      NKI27_15015 ABC transporter transmembrane domain-containing protein	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      NKI27_13810 type I secretion system permease/ATPase	K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D      NKI27_00365 ATP-binding cassette domain-containing protein	K15738 uup; ABC transport system ATP-binding/permease protein
D      NKI27_08345 ATP-binding cassette domain-containing protein	K15738 uup; ABC transport system ATP-binding/permease protein
D      NKI27_06365 modA; molybdate ABC transporter substrate-binding protein	K02020 modA; molybdate transport system substrate-binding protein
D      NKI27_06370 modB; molybdate ABC transporter permease subunit	K02018 modB; molybdate transport system permease protein
D      NKI27_06375 modC; molybdenum ABC transporter ATP-binding protein	K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D      NKI27_16745 modF; molybdate ABC transporter ATP-binding protein ModF	K05776 modF; molybdate transport system ATP-binding protein
D      NKI27_08030 Fe(3+) ABC transporter substrate-binding protein	K02012 afuA; iron(III) transport system substrate-binding protein
D      NKI27_08025 iron ABC transporter permease	K02011 afuB; iron(III) transport system permease protein
D      NKI27_14460 ABC transporter ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      NKI27_00560 thiB; thiamine ABC transporter substrate binding subunit	K02064 thiB; thiamine transport system substrate-binding protein
D      NKI27_00570 ATP-binding cassette domain-containing protein	K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D      NKI27_02410 ABC transporter permease	K11070 potC; spermidine/putrescine transport system permease protein
D      NKI27_02415 ABC transporter permease	K11071 potB; spermidine/putrescine transport system permease protein
D      NKI27_02420 ABC transporter ATP-binding protein	K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D      NKI27_04735 hypothetical protein	K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D      NKI27_04730 ABC transporter permease	K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D      NKI27_04725 ATP-binding cassette domain-containing protein	K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D      NKI27_01290 ABC transporter substrate-binding protein	K17321 glpV; glycerol transport system substrate-binding protein
D      NKI27_06460 fetB; iron export ABC transporter permease subunit FetB	K02069 STAR2; UDP-glucose/iron transport system permease protein
D      NKI27_06465 ATP-binding cassette domain-containing protein	K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D      NKI27_14150 mlaD; outer membrane lipid asymmetry maintenance protein MlaD	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      NKI27_01745 MlaD family protein	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      NKI27_01735 ABC transporter permease	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      NKI27_14155 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      NKI27_01740 ATP-binding cassette domain-containing protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      NKI27_14160 ATP-binding cassette domain-containing protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      NKI27_14145 ABC transporter substrate-binding protein	K07323 mlaC; phospholipid transport system substrate-binding protein
D      NKI27_14140 STAS domain-containing protein	K07122 mlaB; phospholipid transport system transporter-binding protein
D      NKI27_16855 phosphate ABC transporter substrate-binding protein PstS family protein	K02040 pstS; phosphate transport system substrate-binding protein
D      NKI27_16850 ABC transporter permease subunit	K02037 pstC; phosphate transport system permease protein
D      NKI27_16845 pstA; phosphate ABC transporter permease PstA	K02038 pstA; phosphate transport system permease protein
D      NKI27_16840 pstB; phosphate ABC transporter ATP-binding protein PstB	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      NKI27_00390 phnD; phosphonate ABC transporter substrate-binding protein	K02044 phnD; phosphonate transport system substrate-binding protein
D      NKI27_16785 putative selenate ABC transporter substrate-binding protein	K02044 phnD; phosphonate transport system substrate-binding protein
D      NKI27_00395 phnE; phosphonate ABC transporter, permease protein PhnE	K02042 phnE; phosphonate transport system permease protein
D      NKI27_16795 ABC transporter permease	K02042 phnE; phosphonate transport system permease protein
D      NKI27_16790 ATP-binding cassette domain-containing protein	K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D      NKI27_00385 phnC; phosphonate ABC transporter ATP-binding protein	K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D      NKI27_18285 amino acid ABC transporter substrate-binding protein	K09969 aapJ; general L-amino acid transport system substrate-binding protein
D      NKI27_18290 ABC transporter permease subunit	K09970 aapQ; general L-amino acid transport system permease protein
D      NKI27_18295 amino acid ABC transporter permease	K09971 aapM; general L-amino acid transport system permease protein
D      NKI27_18300 amino acid ABC transporter ATP-binding protein	K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D      NKI27_04495 ABC transporter substrate-binding protein	K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D      NKI27_04485 ABC transporter permease	K10023 aotM; arginine/ornithine transport system permease protein
D      NKI27_04490 ABC transporter permease subunit	K10024 aotQ; arginine/ornithine transport system permease protein
D      NKI27_04500 ABC transporter ATP-binding protein	K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D      NKI27_03705 branched-chain amino acid ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      NKI27_03700 livH; high-affinity branched-chain amino acid ABC transporter permease LivH	K01997 livH; branched-chain amino acid transport system permease protein
D      NKI27_03695 high-affinity branched-chain amino acid ABC transporter permease LivM	K01998 livM; branched-chain amino acid transport system permease protein
D      NKI27_03690 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      NKI27_03685 ATP-binding cassette domain-containing protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      NKI27_03305 urtA; urea ABC transporter substrate-binding protein	K11959 urtA; urea transport system substrate-binding protein
D      NKI27_11805 urtA; urea ABC transporter substrate-binding protein	K11959 urtA; urea transport system substrate-binding protein
D      NKI27_03300 urtB; urea ABC transporter permease subunit UrtB	K11960 urtB; urea transport system permease protein
D      NKI27_11800 urtB; urea ABC transporter permease subunit UrtB	K11960 urtB; urea transport system permease protein
D      NKI27_03295 urtC; urea ABC transporter permease subunit UrtC	K11961 urtC; urea transport system permease protein
D      NKI27_11795 urtC; urea ABC transporter permease subunit UrtC	K11961 urtC; urea transport system permease protein
D      NKI27_03290 urtD; urea ABC transporter ATP-binding protein UrtD	K11962 urtD; urea transport system ATP-binding protein
D      NKI27_11790 urtD; urea ABC transporter ATP-binding protein UrtD	K11962 urtD; urea transport system ATP-binding protein
D      NKI27_03285 urtE; urea ABC transporter ATP-binding subunit UrtE	K11963 urtE; urea transport system ATP-binding protein
D      NKI27_11785 urtE; urea ABC transporter ATP-binding subunit UrtE	K11963 urtE; urea transport system ATP-binding protein
D      NKI27_08010 ABC transporter substrate-binding protein	K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D      NKI27_08005 ABC transporter permease	K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D      NKI27_08000 ABC transporter ATP-binding protein	K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D      NKI27_05195 ABC transporter substrate-binding protein	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      NKI27_13180 transporter substrate-binding domain-containing protein	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      NKI27_09125 extracellular solute-binding protein	K13893 yejA; microcin C transport system substrate-binding protein
D      NKI27_09130 extracellular solute-binding protein	K13893 yejA; microcin C transport system substrate-binding protein
D      NKI27_09120 microcin C ABC transporter permease YejB	K13894 yejB; microcin C transport system permease protein
D      NKI27_09115 ABC transporter permease	K13895 yejE; microcin C transport system permease protein
D      NKI27_09110 ABC transporter ATP-binding protein	K13896 yejF; microcin C transport system ATP-binding protein
D      NKI27_01010 iron ABC transporter permease	K25133 hmuU; heme transport system permease protein
D      NKI27_01595 iron ABC transporter permease	K25133 hmuU; heme transport system permease protein
D      NKI27_01015 heme ABC transporter ATP-binding protein	K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D      NKI27_04760 iron ABC transporter substrate-binding protein	K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D      NKI27_04755 iron ABC transporter permease	K02015 ABC.FEV.P; iron complex transport system permease protein
D      NKI27_04750 ABC transporter ATP-binding protein	K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D      NKI27_01590 heme ABC transporter ATP-binding protein	K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D      NKI27_04835 zinc ABC transporter substrate-binding protein	K09815 znuA; zinc transport system substrate-binding protein
D      NKI27_01910 znuB; zinc ABC transporter permease subunit ZnuB	K09816 znuB; zinc transport system permease protein
D      NKI27_04845 metal ABC transporter permease	K09816 znuB; zinc transport system permease protein
D      NKI27_01915 znuC; zinc ABC transporter ATP-binding protein ZnuC	K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D      NKI27_13780 ABC transporter permease	K09690 wzm; homopolymeric O-antigen transport system permease protein
D      NKI27_13000 lptF; LPS export ABC transporter permease LptF	K07091 lptF; lipopolysaccharide export system permease protein
D      NKI27_12995 lptG; LPS export ABC transporter permease LptG	K11720 lptG; lipopolysaccharide export system permease protein
D      NKI27_14185 lptB; LPS export ABC transporter ATP-binding protein	K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D      NKI27_02950 ABC transporter permease	K19341 nosY; Cu-processing system permease protein
D      NKI27_02955 ABC transporter ATP-binding protein	K19340 nosF; Cu-processing system ATP-binding protein
D      NKI27_05180 ABC transporter permease	K25151 gldF; gliding motility-associated transport system permease protein
D      NKI27_05175 ABC transporter ATP-binding protein	K25152 gldA; gliding motility-associated transport system ATP-binding protein
D      NKI27_05185 Gldg family protein	K25153 gldG; gliding motility-associatede transport system auxiliary component
D      NKI27_09500 lipoprotein-releasing ABC transporter permease subunit	K09808 lolC_E; lipoprotein-releasing system permease protein
D      NKI27_09505 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD	K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D      NKI27_12675 ccmD; heme exporter protein CcmD	K02196 ccmD; heme exporter protein D
D      NKI27_12680 heme ABC transporter permease	K02195 ccmC; heme exporter protein C
D      NKI27_12685 ccmB; heme exporter protein CcmB	K02194 ccmB; heme exporter protein B
D      NKI27_12690 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA	K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D      NKI27_02085 ftsX; permease-like cell division protein FtsX	K09811 ftsX; cell division transport system permease protein
D      NKI27_02080 ftsE; cell division ATP-binding protein FtsE	K09812 ftsE; cell division transport system ATP-binding protein
D      NKI27_08060 ABC transporter permease	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      NKI27_08055 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      NKI27_15640 ABC transporter permease	K02004 ABC.CD.P; putative ABC transport system permease protein
D      NKI27_12295 ATP-binding cassette domain-containing protein	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      NKI27_15635 ABC transporter ATP-binding protein	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      NKI27_15445 sufC; Fe-S cluster assembly ATPase SufC	K09013 sufC; Fe-S cluster assembly ATP-binding protein
D      NKI27_05010 MATE family efflux transporter	K26939 norM; MATE family, multidrug efflux pump
D      NKI27_19035 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      NKI27_06510 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      NKI27_01190 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      NKI27_04675 OFA family MFS transporter	K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D      NKI27_08955 MFS transporter	K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D      NKI27_00545 arsJ; organoarsenical effux MFS transporter ArsJ	K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D      NKI27_15690 NarK family nitrate/nitrite MFS transporter	K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D      NKI27_06660 AmpG family muropeptide MFS transporter	K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D      NKI27_01200 ptsP; phosphoenolpyruvate--protein phosphotransferase	K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D      NKI27_17020 ptsP; phosphoenolpyruvate--protein phosphotransferase	K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D      NKI27_14210 HPr family phosphocarrier protein	K08485 ptsO; phosphocarrier protein NPr
D      NKI27_14200 ptsN; PTS IIA-like nitrogen regulatory protein PtsN	K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D      NKI27_06255 potassium channel family protein	K10716 kch; voltage-gated potassium channel
D      NKI27_14725 ion transporter	K10716 kch; voltage-gated potassium channel
D      NKI27_00470 ion transporter	K08714 VGSC; voltage-gated sodium channel
D      NKI27_11735 ammonium transporter	K03320 amt; ammonium transporter, Amt family
D      NKI27_18195 ammonium transporter	K03320 amt; ammonium transporter, Amt family
D      NKI27_04995 glutathione S-transferase family protein	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      NKI27_07220 glutathione S-transferase family protein	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      NKI27_10910 glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      NKI27_16120 sspA; stringent starvation protein A	K03599 sspA; stringent starvation protein A
D      NKI27_01155 VWA domain-containing protein	K07114 yfbK; Ca-activated chloride channel homolog
D      NKI27_07505 VWA domain-containing protein	K07114 yfbK; Ca-activated chloride channel homolog
D      NKI27_09235 Bax inhibitor-1/YccA family protein	K19416 yccA; modulator of FtsH protease
D      NKI27_10720 formate/nitrite transporter family protein	K21993 fdhC; formate transporter
D      NKI27_15055 mechanosensitive ion channel	K03442 mscS; small conductance mechanosensitive channel
D      NKI27_16805 mechanosensitive ion channel	K03442 mscS; small conductance mechanosensitive channel
D      NKI27_11715 mechanosensitive ion channel family protein	K16052 ynaI; MscS family membrane protein
D      NKI27_02380 mechanosensitive ion channel family protein	K16053 ybdG; miniconductance mechanosensitive channel
D      NKI27_10675 mgtE; magnesium transporter	K06213 mgtE; magnesium transporter
D      NKI27_14215 mgtE; magnesium transporter	K06213 mgtE; magnesium transporter
D      NKI27_04325 motA; flagellar motor stator protein MotA	K02556 motA; chemotaxis protein MotA
D      NKI27_12740 flagellar motor protein	K02556 motA; chemotaxis protein MotA
D      NKI27_15950 pomA; flagellar motor protein PomA	K02556 motA; chemotaxis protein MotA
D      NKI27_19070 MotA/TolQ/ExbB proton channel family protein	K02556 motA; chemotaxis protein MotA
D      NKI27_04330 motB; flagellar motor protein MotB	K02557 motB; chemotaxis protein MotB
D      NKI27_12735 motD; flagellar motor protein MotD	K02557 motB; chemotaxis protein MotB
D      NKI27_15945 flagellar motor protein MotB	K02557 motB; chemotaxis protein MotB
D      NKI27_00330 MotA/TolQ/ExbB proton channel family protein	K03561 exbB; biopolymer transport protein ExbB
D      NKI27_00335 MotA/TolQ/ExbB proton channel family protein	K03561 exbB; biopolymer transport protein ExbB
D      NKI27_00995 MotA/TolQ/ExbB proton channel family protein	K03561 exbB; biopolymer transport protein ExbB
D      NKI27_04805 MotA/TolQ/ExbB proton channel family protein	K03561 exbB; biopolymer transport protein ExbB
D      NKI27_09520 MotA/TolQ/ExbB proton channel family protein	K03561 exbB; biopolymer transport protein ExbB
D      NKI27_08770 MotA/TolQ/ExbB proton channel family protein	K03561 exbB; biopolymer transport protein ExbB
D      NKI27_00340 biopolymer transporter ExbD	K03559 exbD; biopolymer transport protein ExbD
D      NKI27_04800 biopolymer transporter ExbD	K03559 exbD; biopolymer transport protein ExbD
D      NKI27_09525 biopolymer transporter ExbD	K03559 exbD; biopolymer transport protein ExbD
D      NKI27_07620 tolQ; protein TolQ	K03562 tolQ; biopolymer transport protein TolQ
D      NKI27_07625 tolR; protein TolR	K03560 tolR; biopolymer transport protein TolR
D      NKI27_15190 zinc transporter ZntB	K16074 zntB; zinc transporter
D      NKI27_09065 crcB; fluoride efflux transporter CrcB	K06199 crcB; fluoride exporter
D      NKI27_14430 HlyC/CorC family transporter	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      NKI27_17090 TolC family outer membrane protein	K12340 tolC; outer membrane protein
D      NKI27_13525 bamA; outer membrane protein assembly factor BamA	K07277 SAM50; outer membrane protein insertion porin family
D      NKI27_08275 bamB; outer membrane protein assembly factor BamB	K17713 bamB; outer membrane protein assembly factor BamB
D      NKI27_16240 outer membrane protein assembly factor BamD	K05807 bamD; outer membrane protein assembly factor BamD
D      NKI27_03540 bamE; outer membrane protein assembly factor BamE	K06186 bamE; outer membrane protein assembly factor BamE
D      NKI27_14175 lptC; LPS export ABC transporter periplasmic protein LptC	K11719 lptC; lipopolysaccharide export system protein LptC
D      NKI27_04950 CBS domain-containing protein	K06189 corC; hemolysin (HlyC) family protein
D      NKI27_10520 efflux RND transporter permease subunit	K07787 cusA; copper/silver efflux system protein
D      NKI27_14780 efflux RND transporter permease subunit	K07787 cusA; copper/silver efflux system protein
D      NKI27_02750 efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_19165 efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_12280 multidrug efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_14695 efflux RND transporter permease subunit	K18989 vexF; multidrug efflux pump
D      NKI27_12025 TRAP transporter large permease subunit	K07084 yuiF; putative amino acid transporter
D      NKI27_14165 calcium/sodium antiporter	K07301 yrbG; cation:H+ antiporter
D      NKI27_11870 putP; sodium/proline symporter PutP	K11928 putP; sodium/proline symporter
D      NKI27_05310 cation acetate symporter	K14393 actP; cation/acetate symporter
D      NKI27_02800 gltS; sodium/glutamate symporter	K03312 gltS; glutamate:Na+ symporter, ESS family
D      NKI27_10630 cation:proton antiporter	K03455 KEA1_2_3; K+:H+ antiporter
D      NKI27_16875 monovalent cation:proton antiporter-2 (CPA2) family protein	K03455 KEA1_2_3; K+:H+ antiporter
D      NKI27_19120 TrkH family potassium uptake protein	K03498 trkH; trk/ktr system potassium uptake protein
D      NKI27_19115 trkA; Trk system potassium transporter TrkA	K03499 trkA; trk/ktr system potassium uptake protein
D      NKI27_04685 uracil-xanthine permease family protein	K02824 uraA; uracil permease
D      NKI27_15175 NCS2 family permease	K06901 pbuG; adenine/guanine/hypoxanthine permease
D      NKI27_17700 chloride channel protein	K03281 clcA; chloride channel protein, CIC family
D      NKI27_00115 SulP family inorganic anion transporter	K03321 TC.SULP; sulfate permease, SulP family
D      NKI27_15740 sulP; sulfate permease	K03321 TC.SULP; sulfate permease, SulP family
D      NKI27_00650 monovalent cation/H+ antiporter subunit A	K05559 phaA; multicomponent K+:H+ antiporter subunit A
D      NKI27_00645 Na+/H+ antiporter subunit C	K05560 phaC; multicomponent K+:H+ antiporter subunit C
D      NKI27_00640 monovalent cation/H+ antiporter subunit D	K05561 phaD; multicomponent K+:H+ antiporter subunit D
D      NKI27_00635 Na+/H+ antiporter subunit E	K05562 phaE; multicomponent K+:H+ antiporter subunit E
D      NKI27_00630 K+/H+ antiporter subunit F	K05563 phaF; multicomponent K+:H+ antiporter subunit F
D      NKI27_00625 Na+/H+ antiporter subunit G	K05564 phaG; multicomponent K+:H+ antiporter subunit G
D      NKI27_16330 murJ; murein biosynthesis integral membrane protein MurJ	K03980 murJ; putative peptidoglycan lipid II flippase
D      NKI27_11620 AEC family transporter	K13936 mdcF; malonate transporter and related proteins
D      NKI27_01755 AEC family transporter	K24180 mleP; malate permease and related proteins
D      NKI27_00705 LysE/ArgO family amino acid transporter	K06895 lysE; L-lysine exporter family protein LysE/ArgO
D      NKI27_14805 LysE family translocator	K05834 rhtB; homoserine/homoserine lactone efflux protein
D      NKI27_06945 LysE family transporter	K05835 rhtC; threonine efflux protein
D      NKI27_03010 AzlC family ABC transporter permease	K26605 azlC; branched chain amino acid efflux pump
D      NKI27_03005 AzlD domain-containing protein	K26606 azlD; branched chain amino acid efflux pump
D      NKI27_07675 AI-2E family transporter	K03548 perM; putative permease
D      NKI27_00375 MarC family protein	K05595 marC; multiple antibiotic resistance protein
D      NKI27_01135 MarC family protein	K05595 marC; multiple antibiotic resistance protein
D      NKI27_11940 MarC family protein	K05595 marC; multiple antibiotic resistance protein
D      NKI27_16045 ftsW; putative lipid II flippase FtsW	K03588 ftsW; cell division protein FtsW
D      NKI27_01285 TMEM165/GDT1 family protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      NKI27_01970 TonB family protein	K03832 tonB; periplasmic protein TonB
D      NKI27_07640 pal; peptidoglycan-associated lipoprotein Pal	K03640 pal; peptidoglycan-associated lipoprotein
D      NKI27_07635 tolB; Tol-Pal system beta propeller repeat protein TolB	K03641 tolB; TolB protein
D      NKI27_12935 sodium ion-translocating decarboxylase subunit beta	K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D      NKI27_12940 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha	K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D      NKI27_12945 OadG family protein	K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D      NKI27_10530 efflux RND transporter periplasmic adaptor subunit	K07798 cusB; membrane fusion protein, copper/silver efflux system
D      NKI27_14790 efflux RND transporter periplasmic adaptor subunit	K07798 cusB; membrane fusion protein, copper/silver efflux system
D      NKI27_02755 efflux RND transporter periplasmic adaptor subunit	K18306 mexH; membrane fusion protein, multidrug efflux system
D      NKI27_19160 efflux RND transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      NKI27_14700 efflux RND transporter periplasmic adaptor subunit	K18990 vexE; membrane fusion protein, multidrug efflux system
D      NKI27_12665 heme lyase CcmF/NrfE family subunit	K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D      NKI27_15230 MgtC/SapB family protein	K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C    02044 Secretion system [BR:alkm02044]
D      NKI27_17090 TolC family outer membrane protein	K12340 tolC; outer membrane protein
D      NKI27_13810 type I secretion system permease/ATPase	K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D      NKI27_18015 peptidase domain-containing ABC transporter	K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D      NKI27_06700 gspD; type II secretion system secretin GspD	K02453 gspD; general secretion pathway protein D
D      NKI27_06205 GspE/PulE family protein	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      NKI27_10235 gspE; type II secretion system ATPase GspE	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      NKI27_10240 gspF; type II secretion system inner membrane protein GspF	K02455 gspF; general secretion pathway protein F
D      NKI27_10245 gspG; type II secretion system major pseudopilin GspG	K02456 gspG; general secretion pathway protein G
D      NKI27_13990 A24 family peptidase	K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D      NKI27_13980 pilB; type IV-A pilus assembly ATPase PilB	K02652 pilB; type IV pilus assembly protein PilB
D      NKI27_13985 type II secretion system F family protein	K02653 pilC; type IV pilus assembly protein PilC
D      NKI27_16270 type IV pilin protein	K02655 pilE; type IV pilus assembly protein PilE
D      NKI27_08250 pilW; type IV pilus biogenesis/stability protein PilW	K02656 pilF; type IV pilus assembly protein PilF
D      NKI27_01960 pilG; twitching motility response regulator PilG	K02657 pilG; twitching motility two-component system response regulator PilG
D      NKI27_01955 pilH; twitching motility response regulator PilH	K02658 pilH; twitching motility two-component system response regulator PilH
D      NKI27_01950 chemotaxis protein CheW	K02659 pilI; twitching motility protein PilI
D      NKI27_01945 methyl-accepting chemotaxis protein	K02660 pilJ; twitching motility protein PilJ
D      NKI27_01940 protein-glutamate O-methyltransferase CheR	K02661 pilK; type IV pilus assembly protein PilK
D      NKI27_16500 pilus assembly protein PilM	K02662 pilM; type IV pilus assembly protein PilM
D      NKI27_16495 PilN domain-containing protein	K02663 pilN; type IV pilus assembly protein PilN
D      NKI27_16490 type 4a pilus biogenesis protein PilO	K02664 pilO; type IV pilus assembly protein PilO
D      NKI27_16485 pilus assembly protein PilP	K02665 pilP; type IV pilus assembly protein PilP
D      NKI27_16480 type IV pilus secretin PilQ	K02666 pilQ; type IV pilus assembly protein PilQ
D      NKI27_18115 type IV pilus twitching motility protein PilT	K02669 pilT; twitching motility protein PilT
D      NKI27_18110 PilT/PilU family type 4a pilus ATPase	K02670 pilU; twitching motility protein PilU
D      NKI27_08920 PilZ domain-containing protein	K02676 pilZ; type IV pilus assembly protein PilZ
D      NKI27_09160 hypothetical protein	K27041 fimL; scaffold protein FimL
D      NKI27_17265 GspE/PulE family protein	K12276 mshE; MSHA biogenesis protein MshE
D      NKI27_17260 type II secretion system F family protein	K12278 mshG; MSHA biogenesis protein MshG
D      NKI27_17280 mshL; pilus (MSHA type) biogenesis protein MshL	K12282 mshL; MSHA biogenesis protein MshL
D      NKI27_17275 AAA family ATPase	K12283 mshM; MSHA biogenesis protein MshM
D      NKI27_18130 YggT family protein	K02221 yggT; YggT family protein
D      NKI27_12780 flhA; flagellar biosynthesis protein FlhA	K02400 flhA; flagellar biosynthesis protein FlhA
D      NKI27_12785 flhB; flagellar biosynthesis protein FlhB	K02401 flhB; flagellar biosynthesis protein FlhB
D      NKI27_12700 EscU/YscU/HrcU family type III secretion system export apparatus switch protein	K04061 flhB2; flagellar biosynthesis protein
D      NKI27_12900 fliF; flagellar M-ring protein FliF	K02409 fliF; flagellar M-ring protein FliF
D      NKI27_12885 fliI; flagellar protein export ATPase FliI	K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D      NKI27_12810 fliN; flagellar motor switch protein FliN	K02417 fliN; flagellar motor switch protein FliN
D      NKI27_12800 fliP; flagellar type III secretion system pore protein FliP	K02419 fliP; flagellar biosynthesis protein FliP
D      NKI27_12795 fliQ; flagellar biosynthesis protein FliQ	K02420 fliQ; flagellar biosynthesis protein FliQ
D      NKI27_12790 fliR; flagellar biosynthetic protein FliR	K02421 fliR; flagellar biosynthesis protein FliR
D      NKI27_14395 DsbC family protein	K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D      NKI27_13645 tssC; type VI secretion system contractile sheath large subunit	K11900 impC; type VI secretion system protein ImpC
D      NKI27_13650 tssB; type VI secretion system contractile sheath small subunit	K11901 impB; type VI secretion system protein ImpB
D      NKI27_06170 tssJ; type VI secretion system lipoprotein TssJ	K11906 vasD; type VI secretion system protein VasD
D      NKI27_13625 tssH; type VI secretion system ATPase TssH	K11907 vasG; type VI secretion system protein VasG
D      NKI27_15995 secA; preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      NKI27_04615 secB; protein-export chaperone SecB	K03071 secB; preprotein translocase subunit SecB
D      NKI27_08205 secD; protein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      NKI27_17575 secE; preprotein translocase subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      NKI27_08210 secF; protein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      NKI27_03620 secG; preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      NKI27_17410 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      NKI27_14420 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      NKI27_08200 yajC; preprotein translocase subunit YajC	K03210 yajC; preprotein translocase subunit YajC
D      NKI27_00005 yidC; membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      NKI27_03140 tatA; Sec-independent protein translocase subunit TatA	K03116 tatA; sec-independent protein translocase protein TatA
D      NKI27_03135 tatB; Sec-independent protein translocase protein TatB	K03117 tatB; sec-independent protein translocase protein TatB
D      NKI27_03130 tatC; twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
C    02042 Bacterial toxins [BR:alkm02042]
D      NKI27_14430 HlyC/CorC family transporter	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      NKI27_01310 hemolysin III family protein	K11068 hlyIII; hemolysin III
C    02022 Two-component system [BR:alkm02022]
D      NKI27_16725 phoR; phosphate regulon sensor histidine kinase PhoR	K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D      NKI27_16720 phoB; phosphate regulon transcriptional regulator PhoB	K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D      NKI27_15505 response regulator transcription factor	K07660 phoP; two-component system, OmpR family, response regulator PhoP
D      NKI27_14480 ATP-binding protein	K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D      NKI27_14485 response regulator	K07661 rstA; two-component system, OmpR family, response regulator RstA
D      NKI27_02620 response regulator transcription factor	K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D      NKI27_04775 response regulator transcription factor	K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D      NKI27_19190 sensor histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      NKI27_02100 response regulator transcription factor	K02483 K02483; two-component system, OmpR family, response regulator
D      NKI27_02155 pdsR; proteobacterial dedicated sortase system response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      NKI27_19195 response regulator transcription factor	K02483 K02483; two-component system, OmpR family, response regulator
D      NKI27_01450 narL; two-component system response regulator NarL	K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D      NKI27_05080 response regulator	K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D      NKI27_09250 uvrY; UvrY/SirA/GacA family response regulator transcription factor	K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D      NKI27_01525 histidine kinase	K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D      NKI27_01520 LytTR family DNA-binding domain-containing protein	K08083 algR; two-component system, LytTR family, response regulator AlgR
D      NKI27_17210 glnL; nitrogen regulation protein NR(II)	K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D      NKI27_17215 glnG; nitrogen regulation protein NR(I)	K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D      NKI27_16250 ATP-binding protein	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      NKI27_16255 sigma-54 dependent transcriptional regulator	K02667 pilR; two-component system, NtrC family, response regulator PilR
D      NKI27_03355 sigma 54-interacting transcriptional regulator	K07715 glrR; two-component system, NtrC family, response regulator GlrR
D      NKI27_09720 prsR; PEP-CTERM-box response regulator transcription factor	K02481 flgR; two-component system, NtrC family, response regulator
D      NKI27_12750 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      NKI27_12865 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      NKI27_12760 cheY; chemotaxis response regulator CheY	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      NKI27_12870 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      NKI27_12745 chemotaxis response regulator protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      NKI27_12845 chemotaxis response regulator protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      NKI27_08330 chemotaxis protein CheV	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_08520 chemotaxis protein CheV	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_10605 chemotaxis protein	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_01960 pilG; twitching motility response regulator PilG	K02657 pilG; twitching motility two-component system response regulator PilG
D      NKI27_01955 pilH; twitching motility response regulator PilH	K02658 pilH; twitching motility two-component system response regulator PilH
D      NKI27_01930 chemotaxis protein CheB	K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D      NKI27_12915 ATP-binding protein	K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D      NKI27_12910 sigma-54 dependent transcriptional regulator	K10943 flrC; two-component system, response regulator FlrC
D      NKI27_16165 response regulator transcription factor	K15012 regA; two-component system, response regulator RegA
D      NKI27_09385 ATP-binding protein	K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D      NKI27_12830 Hpt domain-containing protein	K20976 hptB; histidine phosphotransfer protein HptB
D      NKI27_11500 fused response regulator/phosphatase	K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D      NKI27_12835 SpoIIE family protein phosphatase	K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
C    02035 Bacterial motility proteins [BR:alkm02035]
D      NKI27_12750 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      NKI27_12865 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      NKI27_12720 chemotaxis protein CheW	K03408 cheW; purine-binding chemotaxis protein CheW
D      NKI27_12860 chemotaxis protein CheW	K03408 cheW; purine-binding chemotaxis protein CheW
D      NKI27_12850 cheD; chemoreceptor glutamine deamidase CheD	K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D      NKI27_08525 protein-glutamate O-methyltransferase CheR	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      NKI27_12855 protein-glutamate O-methyltransferase	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      NKI27_12745 chemotaxis response regulator protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      NKI27_12845 chemotaxis response regulator protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      NKI27_12760 cheY; chemotaxis response regulator CheY	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      NKI27_12870 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      NKI27_12755 protein phosphatase CheZ	K03414 cheZ; chemotaxis protein CheZ
D      NKI27_08330 chemotaxis protein CheV	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_08520 chemotaxis protein CheV	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_10605 chemotaxis protein	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      NKI27_12885 fliI; flagellar protein export ATPase FliI	K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D      NKI27_12800 fliP; flagellar type III secretion system pore protein FliP	K02419 fliP; flagellar biosynthesis protein FliP
D      NKI27_12795 fliQ; flagellar biosynthesis protein FliQ	K02420 fliQ; flagellar biosynthesis protein FliQ
D      NKI27_12790 fliR; flagellar biosynthetic protein FliR	K02421 fliR; flagellar biosynthesis protein FliR
D      NKI27_12780 flhA; flagellar biosynthesis protein FlhA	K02400 flhA; flagellar biosynthesis protein FlhA
D      NKI27_12785 flhB; flagellar biosynthesis protein FlhB	K02401 flhB; flagellar biosynthesis protein FlhB
D      NKI27_12895 fliG; flagellar motor switch protein FliG	K02410 fliG; flagellar motor switch protein FliG
D      NKI27_12815 fliM; flagellar motor switch protein FliM	K02416 fliM; flagellar motor switch protein FliM
D      NKI27_12810 fliN; flagellar motor switch protein FliN	K02417 fliN; flagellar motor switch protein FliN
D      NKI27_12900 fliF; flagellar M-ring protein FliF	K02409 fliF; flagellar M-ring protein FliF
D      NKI27_08120 flagellar basal body P-ring protein FlgI	K02394 flgI; flagellar P-ring protein FlgI
D      NKI27_08115 flgH; flagellar basal body L-ring protein FlgH	K02393 flgH; flagellar L-ring protein FlgH
D      NKI27_12820 flagellar basal body-associated FliL family protein	K02415 fliL; flagellar protein FliL
D      NKI27_12905 fliE; flagellar hook-basal body complex protein FliE	K02408 fliE; flagellar hook-basal body complex protein FliE
D      NKI27_08085 flgB; flagellar basal body rod protein FlgB	K02387 flgB; flagellar basal-body rod protein FlgB
D      NKI27_08090 flgC; flagellar basal body rod protein FlgC	K02388 flgC; flagellar basal-body rod protein FlgC
D      NKI27_08095 flagellar hook assembly protein FlgD	K02389 flgD; flagellar basal-body rod modification protein FlgD
D      NKI27_08105 flgF; flagellar basal-body rod protein FlgF	K02391 flgF; flagellar basal-body rod protein FlgF
D      NKI27_08110 flgG; flagellar basal-body rod protein FlgG	K02392 flgG; flagellar basal-body rod protein FlgG
D      NKI27_03225 flagellin	K02406 fliC; flagellin
D      NKI27_07450 fliS; flagellar export chaperone FliS	K02422 fliS; flagellar secretion chaperone FliS
D      NKI27_12765 RNA polymerase sigma factor FliA	K02405 fliA; RNA polymerase sigma factor FliA
D      NKI27_04325 motA; flagellar motor stator protein MotA	K02556 motA; chemotaxis protein MotA
D      NKI27_12740 flagellar motor protein	K02556 motA; chemotaxis protein MotA
D      NKI27_15950 pomA; flagellar motor protein PomA	K02556 motA; chemotaxis protein MotA
D      NKI27_19070 MotA/TolQ/ExbB proton channel family protein	K02556 motA; chemotaxis protein MotA
D      NKI27_04330 motB; flagellar motor protein MotB	K02557 motB; chemotaxis protein MotB
D      NKI27_12735 motD; flagellar motor protein MotD	K02557 motB; chemotaxis protein MotB
D      NKI27_15945 flagellar motor protein MotB	K02557 motB; chemotaxis protein MotB
D      NKI27_12920 sigma-54 dependent transcriptional regulator	K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D      NKI27_12915 ATP-binding protein	K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D      NKI27_12910 sigma-54 dependent transcriptional regulator	K10943 flrC; two-component system, response regulator FlrC
D      NKI27_12770 MinD/ParA family protein	K04562 flhG; flagellar biosynthesis protein FlhG
D      NKI27_01960 pilG; twitching motility response regulator PilG	K02657 pilG; twitching motility two-component system response regulator PilG
D      NKI27_01955 pilH; twitching motility response regulator PilH	K02658 pilH; twitching motility two-component system response regulator PilH
D      NKI27_01950 chemotaxis protein CheW	K02659 pilI; twitching motility protein PilI
D      NKI27_01945 methyl-accepting chemotaxis protein	K02660 pilJ; twitching motility protein PilJ
D      NKI27_01940 protein-glutamate O-methyltransferase CheR	K02661 pilK; type IV pilus assembly protein PilK
D      NKI27_16255 sigma-54 dependent transcriptional regulator	K02667 pilR; two-component system, NtrC family, response regulator PilR
D      NKI27_16250 ATP-binding protein	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      NKI27_18115 type IV pilus twitching motility protein PilT	K02669 pilT; twitching motility protein PilT
D      NKI27_18110 PilT/PilU family type 4a pilus ATPase	K02670 pilU; twitching motility protein PilU
D      NKI27_01930 chemotaxis protein CheB	K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D      NKI27_13980 pilB; type IV-A pilus assembly ATPase PilB	K02652 pilB; type IV pilus assembly protein PilB
D      NKI27_13985 type II secretion system F family protein	K02653 pilC; type IV pilus assembly protein PilC
D      NKI27_13990 A24 family peptidase	K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D      NKI27_08250 pilW; type IV pilus biogenesis/stability protein PilW	K02656 pilF; type IV pilus assembly protein PilF
D      NKI27_16480 type IV pilus secretin PilQ	K02666 pilQ; type IV pilus assembly protein PilQ
D      NKI27_16485 pilus assembly protein PilP	K02665 pilP; type IV pilus assembly protein PilP
D      NKI27_16490 type 4a pilus biogenesis protein PilO	K02664 pilO; type IV pilus assembly protein PilO
D      NKI27_16495 PilN domain-containing protein	K02663 pilN; type IV pilus assembly protein PilN
D      NKI27_16500 pilus assembly protein PilM	K02662 pilM; type IV pilus assembly protein PilM
D      NKI27_08920 PilZ domain-containing protein	K02676 pilZ; type IV pilus assembly protein PilZ
D      NKI27_16270 type IV pilin protein	K02655 pilE; type IV pilus assembly protein PilE
C    03037 Cilium and associated proteins
C    04812 Cytoskeleton proteins [BR:alkm04812]
D      NKI27_14255 rod shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins
D      NKI27_16015 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      NKI27_16020 ftsA; cell division protein FtsA	K03590 ftsA; cell division protein FtsA
D      NKI27_04265 minC; septum site-determining protein MinC	K03610 minC; septum site-determining protein MinC
D      NKI27_04260 minD; septum site-determining protein MinD	K03609 minD; septum site-determining protein MinD
D      NKI27_04255 minE; cell division topological specificity factor MinE	K03608 minE; cell division topological specificity factor
D      NKI27_00035 AAA family ATPase	K03496 parA; chromosome partitioning protein
D      NKI27_12730 ParA family protein	K03496 parA; chromosome partitioning protein
D      NKI27_13100 ParA family protein	K03496 parA; chromosome partitioning protein
D      NKI27_00040 ParB/RepB/Spo0J family partition protein	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C    04147 Exosome [BR:alkm04147]
D      NKI27_12200 htpG; molecular chaperone HtpG	K04079 HSP90A; molecular chaperone HtpG
D      NKI27_06310 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      NKI27_11695 glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      NKI27_15295 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      NKI27_12485 peroxiredoxin	K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D      NKI27_06685 groL; chaperonin GroEL	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      NKI27_03560 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      NKI27_17805 pgi; glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      NKI27_07550 guaB; IMP dehydrogenase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      NKI27_17520 tuf; elongation factor Tu	K02358 tuf; elongation factor Tu
D      NKI27_16820 histidine triad nucleotide-binding protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      NKI27_14015 HIT family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      NKI27_08800 AMP-binding protein	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      NKI27_04625 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_12600 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_13290 acetyl-CoA C-acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_14100 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      NKI27_15345 ahcY; adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      NKI27_05145 adk; adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      NKI27_15180 adenine phosphoribosyltransferase	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      NKI27_01530 argH; argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      NKI27_12465 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      NKI27_14465 glpK; glycerol kinase GlpK	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      NKI27_02390 glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_13225 glutamine synthetase III	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_17200 glnA; glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      NKI27_16580 hemB; porphobilinogen synthase	K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D      NKI27_12445 4a-hydroxytetrahydrobiopterin dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      NKI27_13205 alkaline phosphatase	K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D      NKI27_03845 glyoxylate/hydroxypyruvate reductase A	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      NKI27_15255 serA; phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      NKI27_02890 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D      NKI27_02795 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_08425 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NKI27_10185 FAD-binding protein	K03522 fixB; electron transfer flavoprotein alpha subunit
D      NKI27_10710 zwf; glucose-6-phosphate dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      NKI27_03615 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C    02048 Prokaryotic defense system [BR:alkm02048]
D      NKI27_07765 DEAD/DEAH box helicase family protein	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D      NKI27_07795 HsdR family type I site-specific deoxyribonuclease	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D      NKI27_07865 restriction endonuclease subunit S	K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D      NKI27_07815 type I restriction-modification system subunit M	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D      NKI27_10075 McrC family protein	K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D      NKI27_06020 type II toxin-antitoxin system RelE/ParE family toxin	K06218 relE; mRNA interferase RelE/StbE
D      NKI27_06025 type II toxin-antitoxin system Phd/YefM family antitoxin	K18923 stbD; antitoxin StbD
D      NKI27_06100 type II toxin-antitoxin system YafQ family toxin	K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D      NKI27_06105 type II toxin-antitoxin system RelB/DinJ family antitoxin	K07473 dinJ; DNA-damage-inducible protein J
D      NKI27_05335 Txe/YoeB family addiction module toxin	K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D      NKI27_06075 Txe/YoeB family addiction module toxin	K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D      NKI27_05330 type II toxin-antitoxin system prevent-host-death family antitoxin	K19159 yefM; antitoxin YefM
D      NKI27_06070 type II toxin-antitoxin system prevent-host-death family antitoxin	K19159 yefM; antitoxin YefM
D      NKI27_06040 type II toxin-antitoxin system CcdA family antitoxin	K19164 ccdA; antitoxin CcdA
D      NKI27_06090 type II toxin-antitoxin system RelE/ParE family toxin	K19092 parE1_3_4; toxin ParE1/3/4
D      NKI27_05970 type II toxin-antitoxin system RelE/ParE family toxin	K19092 parE1_3_4; toxin ParE1/3/4
D      NKI27_00360 type II toxin-antitoxin system ParD family antitoxin	K07746 parD1_3_4; antitoxin ParD1/3/4
D      NKI27_06095 type II toxin-antitoxin system ParD family antitoxin	K07746 parD1_3_4; antitoxin ParD1/3/4
D      NKI27_16015 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      NKI27_14255 rod shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins
D      NKI27_04275 parC; DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      NKI27_15060 parE; DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      NKI27_11605 gltX; glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      NKI27_14345 succinate dehydrogenase assembly factor 2	K09159 cptB; antitoxin CptB
D      NKI27_03420 cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      NKI27_08235 IscS subfamily cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C    04030 G protein-coupled receptors
C    04050 Cytokine receptors
C    04054 Pattern recognition receptors
C    03310 Nuclear receptors
C    04040 Ion channels
C    04031 GTP-binding proteins
C    04052 Cytokines and neuropeptides
C    04515 Cell adhesion molecules
C    04090 CD molecules
C    01504 Antimicrobial resistance genes [BR:alkm01504]
D      NKI27_06085 bla; class A beta-lactamase	K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D      NKI27_15505 response regulator transcription factor	K07660 phoP; two-component system, OmpR family, response regulator PhoP
D      NKI27_19160 efflux RND transporter periplasmic adaptor subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      NKI27_02750 efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_19165 efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_12280 multidrug efflux RND transporter permease subunit	K18138 acrB; multidrug efflux pump
D      NKI27_17090 TolC family outer membrane protein	K12340 tolC; outer membrane protein
C    00535 Proteoglycans
C    00536 Glycosaminoglycan binding proteins
C    00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:alkm00537]
D      NKI27_13205 alkaline phosphatase	K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C    04091 Lectins
C    04990 Domain-containing proteins not elsewhere classified
B
B  09185 Viral protein families
C    03200 Viral proteins
C    03210 Viral fusion proteins
B
B  09184 RNA family
C    03100 Non-coding RNAs [BR:alkm03100]
D      NKI27_04515 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      NKI27_12315 tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      NKI27_08325 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      NKI27_04510 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      NKI27_09275 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      NKI27_08140 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      NKI27_04155 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      NKI27_04530 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      NKI27_11315 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      NKI27_08620 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      NKI27_09240 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      NKI27_17580 tRNA-Trp	K14235 tRNA-Trp; tRNA Trp
D      NKI27_06770 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      NKI27_07725 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      NKI27_04505 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      NKI27_16090 rnpB; RNase P RNA component class A	K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B  09191 Unclassified: metabolism
C    99980 Enzymes with EC numbers
D      NKI27_08605 PQQ-dependent sugar dehydrogenase	K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D      NKI27_16535 coniferyl aldehyde dehydrogenase	K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D      NKI27_00540 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase	K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D      NKI27_01175 NADPH-dependent 2,4-dienoyl-CoA reductase	K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D      NKI27_10770 NADPH-dependent 2,4-dienoyl-CoA reductase	K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D      NKI27_04990 NADP-dependent oxidoreductase	K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D      NKI27_03800 (2Fe-2S)-binding protein	K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D      NKI27_03805 molybdopterin-dependent oxidoreductase	K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D      NKI27_00660 electron transfer flavoprotein-ubiquinone oxidoreductase	K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D      NKI27_10175 electron transfer flavoprotein-ubiquinone oxidoreductase	K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D      NKI27_12040 zinc-binding alcohol dehydrogenase family protein	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      NKI27_18270 NADP-dependent oxidoreductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      NKI27_00290 FMN-dependent NADH-azoreductase	K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D      NKI27_08165 NAD(P)H-dependent oxidoreductase	K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D      NKI27_11815 msrA; peptide-methionine (S)-S-oxide reductase MsrA	K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D      NKI27_18560 msrB; peptide-methionine (R)-S-oxide reductase MsrB	K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D      NKI27_07080 yghU; glutathione-dependent disulfide-bond oxidoreductase	K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D      NKI27_02585 glutathione S-transferase family protein	K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D      NKI27_07685 peroxiredoxin	K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D      NKI27_12195 Dyp-type peroxidase	K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D      NKI27_08145 pirin family protein	K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D      NKI27_10735 Fe2+-dependent dioxygenase	K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D      NKI27_08650 hmpA; NO-inducible flavohemoprotein	K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D      NKI27_00830 ferredoxin--NADP reductase	K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D      NKI27_06220 arsC; arsenate reductase (glutaredoxin)	K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D      NKI27_06340 protein-L-isoaspartate(D-aspartate) O-methyltransferase	K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D      NKI27_08570 cyclopropane-fatty-acyl-phospholipid synthase family protein	K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D      NKI27_15665 tehB; tellurite resistance methyltransferase TehB	K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D      NKI27_08810 beta-ketoacyl-ACP synthase III	K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D      NKI27_04945 lnt; apolipoprotein N-acyltransferase	K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D      NKI27_09465 aat; leucyl/phenylalanyl-tRNA--protein transferase	K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D      NKI27_09460 arginyltransferase	K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D      NKI27_05025 sugar phosphorylase	K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352]
D      NKI27_08050 DTW domain-containing protein	K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D      NKI27_18275 DTW domain-containing protein	K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D      NKI27_15925 lgt; prolipoprotein diacylglyceryl transferase	K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D      NKI27_11660 FAD:protein FMN transferase	K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D      NKI27_11550 kinase/pyrophosphorylase	K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D      NKI27_17140 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D      NKI27_10635 YdiU family protein	K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D      NKI27_07615 ybgC; tol-pal system-associated acyl-CoA thioesterase	K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D      NKI27_11510 PHP domain-containing protein	K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D      NKI27_10155 sixA; phosphohistidine phosphatase SixA	K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D      NKI27_05610 endonuclease	K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D      NKI27_08925 TatD family hydrolase	K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D      NKI27_16150 TatD family hydrolase	K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D      NKI27_18345 alpha/beta fold hydrolase	K01175 ybfF; esterase [EC:3.1.-.-]
D      NKI27_19100 def; peptide deformylase	K01462 PDF; peptide deformylase [EC:3.5.1.88]
D      NKI27_14225 carbon-nitrogen hydrolase family protein	K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D      NKI27_11470 Maf family nucleotide pyrophosphatase	K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D      NKI27_07520 MoxR family ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      NKI27_09475 MoxR family ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      NKI27_04350 NAD(P)H-hydrate dehydratase	K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D      NKI27_04650 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D      NKI27_06405 rsxD; electron transport complex subunit RsxD	K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D      NKI27_06410 rsxC; electron transport complex subunit RsxC	K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D      NKI27_06415 rsxB; electron transport complex subunit RsxB	K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D      NKI27_11690 Na(+)-translocating NADH-quinone reductase subunit A	K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D      NKI27_11685 NADH:ubiquinone reductase (Na(+)-transporting) subunit B	K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D      NKI27_11680 Na(+)-translocating NADH-quinone reductase subunit C	K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D      NKI27_11675 NADH:ubiquinone reductase (Na(+)-transporting) subunit D	K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D      NKI27_11670 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E	K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D      NKI27_11665 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F	K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D      NKI27_11195 heavy metal translocating P-type ATPase	K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C    99981 Carbohydrate metabolism
D      NKI27_17760 sfsA; DNA/RNA nuclease SfsA	K06206 sfsA; sugar fermentation stimulation protein A
C    99982 Energy metabolism
D      NKI27_13490 ferredoxin family protein	K05524 fdxA; ferredoxin
D      NKI27_06400 rsxG; electron transport complex subunit RsxG	K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D      NKI27_06395 electron transport complex subunit E	K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D      NKI27_06420 rsxA; electron transport complex subunit RsxA	K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D      NKI27_04865 flavodoxin	K03840 fldB; flavodoxin II
D      NKI27_07205 VWA domain-containing protein	K02448 norD; nitric oxide reductase NorD protein
D      NKI27_07210 cytochrome c oxidase subunit 3 family protein	K02164 norE; nitric oxide reductase NorE protein
D      NKI27_07115 CbbQ/NirQ/NorQ/GpvN family protein	K04748 norQ; nitric oxide reductase NorQ protein
D      NKI27_01420 cytochrome c3 family protein	K02569 napC; cytochrome c-type protein NapC
D      NKI27_10180 electron transfer flavoprotein subunit beta/FixA family protein	K03521 fixA; electron transfer flavoprotein beta subunit
C    99983 Lipid metabolism
D      NKI27_16615 acyl-CoA dehydrogenase family protein	K09456 aidB; putative acyl-CoA dehydrogenase
C    99984 Nucleotide metabolism
C    99985 Amino acid metabolism
D      NKI27_16755 cysZ; sulfate transporter CysZ	K06203 cysZ; CysZ protein
D      NKI27_18120 YggS family pyridoxal phosphate-dependent enzyme	K06997 yggS; PLP dependent protein
C    99986 Glycan metabolism
D      NKI27_12385 lapB; lipopolysaccharide assembly protein LapB	K19804 lapB; lipopolysaccharide assembly protein B
C    99987 Cofactor metabolism
D      NKI27_07035 cobW; cobalamin biosynthesis protein CobW	K02234 cobW; cobalamin biosynthesis protein CobW
D      NKI27_07140 nirJ; heme d1 biosynthesis radical SAM protein NirJ	K24868 nirJ; heme d1 biosynthesis protein
D      NKI27_03155 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB	K03688 ubiB; ubiquinone biosynthesis protein
D      NKI27_18185 accessory factor UbiK family protein	K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D      NKI27_13435 SCP2 sterol-binding domain-containing protein	K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
C    99988 Secondary metabolism
C    99999 Others
D      NKI27_12035 DoxX family protein	K15977 K15977; putative oxidoreductase
D      NKI27_18765 alpha/beta hydrolase	K06999 K06999; phospholipase/carboxylesterase
D      NKI27_07460 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	K09181 yfiQ; acetyltransferase
B
B  09192 Unclassified: genetic information processing
C    99973 Transcription
D      NKI27_01800 cold-shock protein	K03704 cspA; cold shock protein
D      NKI27_03760 cold-shock protein	K03704 cspA; cold shock protein
D      NKI27_04010 cold-shock protein	K03704 cspA; cold shock protein
D      NKI27_11930 cold-shock protein	K03704 cspA; cold shock protein
D      NKI27_13615 cold shock domain-containing protein	K03704 cspA; cold shock protein
D      NKI27_18365 cold-shock protein	K03704 cspA; cold shock protein
D      NKI27_18400 cold-shock protein	K03704 cspA; cold shock protein
D      NKI27_19175 cold-shock protein	K03704 cspA; cold shock protein
D      NKI27_01370 rsd; sigma D regulator	K07740 rsd; regulator of sigma D
D      NKI27_18190 glnK; P-II family nitrogen regulator	K04752 glnK; nitrogen regulatory protein P-II 2
D      NKI27_01860 RNA-binding transcriptional accessory protein	K06959 tex; protein Tex
C    99974 Translation
D      NKI27_10465 MBL fold metallo-hydrolase	K07576 K07576; metallo-beta-lactamase family protein
D      NKI27_13850 MBL fold metallo-hydrolase	K07576 K07576; metallo-beta-lactamase family protein
D      NKI27_13860 MBL fold metallo-hydrolase	K07576 K07576; metallo-beta-lactamase family protein
C    99975 Protein processing
D      NKI27_12460 META domain-containing protein	K03668 hslJ; heat shock protein HslJ
D      NKI27_09445 clpS; ATP-dependent Clp protease adapter ClpS	K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D      NKI27_11295 tig; trigger factor	K03545 tig; trigger factor
D      NKI27_02865 urease accessory protein UreF	K03188 ureF; urease accessory protein
D      NKI27_02870 ureG; urease accessory protein UreG	K03189 ureG; urease accessory protein
D      NKI27_02875 HupE/UreJ family protein	K03192 ureJ; urease accessory protein
D      NKI27_07060 HupE/UreJ family protein	K03192 ureJ; urease accessory protein
D      NKI27_03520 smpB; SsrA-binding protein SmpB	K03664 smpB; SsrA-binding protein
D      NKI27_18180 YifB family Mg chelatase-like AAA ATPase	K07391 comM; magnesium chelatase family protein
D      NKI27_18600 2OG-Fe(II) oxygenase	K07394 K07394; SM-20-related protein
D      NKI27_05705 hypothetical protein	K07396 K07396; putative protein-disulfide isomerase
D      NKI27_19225 hypothetical protein	K07396 K07396; putative protein-disulfide isomerase
D      NKI27_16885 OsmC family protein	K07397 yhfA; putative redox protein
D      NKI27_09195 nfuA; Fe-S biogenesis protein NfuA	K07400 nfuA; Fe/S biogenesis protein NfuA
D      NKI27_03810 XdhC family protein	K07402 xdhC; xanthine dehydrogenase accessory factor
C    99976 Replication and repair
D      NKI27_06665 MGMT family protein	K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D      NKI27_05830 radC; DNA repair protein RadC	K03630 radC; DNA repair protein RadC
D      NKI27_16955 radC; DNA repair protein RadC	K03630 radC; DNA repair protein RadC
D      NKI27_07100 DNA recombination protein RmuC	K09760 rmuC; DNA recombination protein RmuC
D      NKI27_16105 YraN family protein	K07460 yraN; putative endonuclease
D      NKI27_01330 GIY-YIG nuclease family protein	K07461 K07461; putative endonuclease
D      NKI27_07860 GIY-YIG nuclease family protein	K07461 K07461; putative endonuclease
D      NKI27_19090 dprA; DNA-processing protein DprA	K04096 smf; DNA processing protein
D      NKI27_09060 replication-associated recombination protein A	K07478 ycaJ; putative ATPase
D      NKI27_04130 DUF927 domain-containing protein	K06919 K06919; putative DNA primase/helicase
D      NKI27_09800 tnpB; IS66 family insertion sequence element accessory protein TnpB	K07484 K07484; transposase
D      NKI27_09820 IS66 family transposase	K07484 K07484; transposase
D      NKI27_09970 transposase	K07484 K07484; transposase
D      NKI27_02520 transposase	K07491 rayT; REP-associated tyrosine transposase
D      NKI27_15375 IS3 family transposase	K07497 K07497; putative transposase
C    99979 Viral proteins
C    99998 Others
D      NKI27_10855 rhodanese-like domain-containing protein	K03972 pspE; phage shock protein E
D      NKI27_08685 YbaB/EbfC family nucleoid-associated protein	K09747 ebfC; nucleoid-associated protein EbfC
B
B  09193 Unclassified: signaling and cellular processes
C    99977 Transport
D      NKI27_00285 BCCT family transporter	K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D      NKI27_16665 inorganic phosphate transporter	K03306 TC.PIT; inorganic phosphate transporter, PiT family
D      NKI27_03525 sodium-dependent transporter	K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D      NKI27_13215 brnQ; branched-chain amino acid transport system II carrier protein	K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D      NKI27_12020 bile acid:sodium symporter family protein	K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C    99978 Cell growth
D      NKI27_15425 SpoVR family protein	K06415 spoVR; stage V sporulation protein R
D      NKI27_04595 peptidoglycan DD-metalloendopeptidase family protein	K22719 envC; murein hydrolase activator
C    99993 Cell motility
D      NKI27_16630 lpoB; penicillin-binding protein activator LpoB	K07337 K07337; penicillin-binding protein activator
C    99995 Signaling proteins
D      NKI27_08355 universal stress protein	K06149 uspA; universal stress protein A
D      NKI27_00895 universal stress protein	K14061 uspF; universal stress protein F
D      NKI27_17195 typA; translational GTPase TypA	K06207 typA; GTP-binding protein
D      NKI27_04960 PhoH family protein	K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D      NKI27_04235 PhoH family protein	K07175 phoH2; PhoH-like ATPase
D      NKI27_15415 PrkA family serine protein kinase	K07180 prkA; serine protein kinase
D      NKI27_00275 DUF294 nucleotidyltransferase-like domain-containing protein	K07182 K07182; CBS domain-containing protein
D      NKI27_06135 DUF294 nucleotidyltransferase-like domain-containing protein	K07182 K07182; CBS domain-containing protein
D      NKI27_06650 YajQ family cyclic di-GMP-binding protein	K09767 yajQ; cyclic-di-GMP-binding protein
C    99992 Structural proteins
D      NKI27_09055 lolA; outer membrane lipoprotein chaperone LolA	K03634 lolA; outer membrane lipoprotein carrier protein
D      NKI27_08815 VacJ family lipoprotein	K04754 mlaA; phospholipid-binding lipoprotein MlaA
D      NKI27_06350 peptidoglycan DD-metalloendopeptidase family protein	K06194 nlpD; lipoprotein NlpD
D      NKI27_10895 NfeD family protein	K07340 ybbJ; inner membrane protein
D      NKI27_16570 AI-2E family transporter	K11744 tqsA; AI-2 transport protein TqsA
D      NKI27_12670 ccmE; cytochrome c maturation protein CcmE	K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D      NKI27_12655 cytochrome c-type biogenesis protein CcmH	K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C    99994 Others
D      NKI27_16835 phoU; phosphate signaling complex protein PhoU	K02039 phoU; phosphate transport system protein
D      NKI27_04705 (2Fe-2S)-binding protein	K02192 bfd; bacterioferritin-associated ferredoxin
D      NKI27_00425 phnK; phosphonate C-P lyase system protein PhnK	K05781 phnK; putative phosphonate transport system ATP-binding protein
D      NKI27_02960 nitrous oxide reductase family maturation protein NosD	K07218 nosD; nitrous oxidase accessory protein
D      NKI27_00980 hutX; heme utilization cystosolic carrier protein HutX	K07227 chuX; heme iron utilization protein
D      NKI27_18780 NnrS family protein	K07234 K07234; uncharacterized protein involved in response to NO
D      NKI27_02945 nitrous oxide reductase accessory protein NosL	K19342 nosL; copper chaperone NosL
B
B  09194 Poorly characterized
C    99996 General function prediction only
D      NKI27_09035 CvpA family protein	K03558 cvpA; membrane protein required for colicin V production
D      NKI27_14075 glucosaminidase domain-containing protein	K03796 bax; Bax protein
D      NKI27_08820 DUF3336 domain-containing protein	K07001 K07001; NTE family protein
D      NKI27_08940 patatin-like phospholipase family protein	K07001 K07001; NTE family protein
D      NKI27_17015 patatin-like phospholipase family protein	K07001 K07001; NTE family protein
D      NKI27_17680 erpA; iron-sulfur cluster insertion protein ErpA	K15724 erpA; iron-sulfur cluster insertion protein
D      NKI27_15440 sufB; Fe-S cluster assembly protein SufB	K09014 sufB; Fe-S cluster assembly protein SufB
D      NKI27_06675 FxsA family protein	K07113 fxsA; UPF0716 protein FxsA
D      NKI27_15470 SufE family protein	K02426 sufE; cysteine desulfuration protein SufE
D      NKI27_06525 rhodanese-related sulfurtransferase	K07146 K07146; UPF0176 protein
D      NKI27_09420 hflD; high frequency lysogenization protein HflD	K07153 hflD; high frequency lysogenization protein
D      NKI27_06710 LemA family protein	K03744 lemA; LemA protein
D      NKI27_09345 LemA family protein	K03744 lemA; LemA protein
D      NKI27_13620 SlyX family protein	K03745 slyX; SlyX protein
D      NKI27_06345 DUF368 domain-containing protein	K08974 K08974; putative membrane protein
D      NKI27_18355 DUF2238 domain-containing protein	K08984 yjdF; putative membrane protein
D      NKI27_06245 DUF350 domain-containing protein	K08989 K08989; putative membrane protein
D      NKI27_12105 YchJ family protein	K09858 K09858; SEC-C motif domain protein
D      NKI27_01690 phnA protein	K06193 phnA; protein PhnA
D      NKI27_12140 PhnA domain-containing protein	K06193 phnA; protein PhnA
C    99997 Function unknown
D      NKI27_01340 CoA-binding protein	K06929 K06929; uncharacterized protein
D      NKI27_04645 DUF1289 domain-containing protein	K06938 K06938; uncharacterized protein
D      NKI27_12555 DUF1289 domain-containing protein	K06938 K06938; uncharacterized protein
D      NKI27_01235 YkgJ family cysteine cluster protein	K06940 K06940; uncharacterized protein
D      NKI27_14040 YkgJ family cysteine cluster protein	K06940 K06940; uncharacterized protein
D      NKI27_08560 FAD-dependent oxidoreductase	K06954 K06954; uncharacterized protein
D      NKI27_15155 succinylglutamate desuccinylase/aspartoacylase family protein	K06987 K06987; uncharacterized protein
D      NKI27_11265 C39 family peptidase	K06992 K06992; uncharacterized protein
D      NKI27_17065 esterase YqiA	K07000 K07000; uncharacterized protein
D      NKI27_06845 MMPL family transporter	K07003 K07003; uncharacterized protein
D      NKI27_12305 alpha/beta fold hydrolase	K07019 K07019; uncharacterized protein
D      NKI27_18415 dienelactone hydrolase family protein	K07020 K07020; uncharacterized protein
D      NKI27_17735 AAA family ATPase	K07028 K07028; uncharacterized protein
D      NKI27_03380 TIGR01777 family oxidoreductase	K07071 K07071; uncharacterized protein
D      NKI27_06850 TAXI family TRAP transporter solute-binding subunit	K07080 K07080; uncharacterized protein
D      NKI27_08845 sulfite exporter TauE/SafE family protein	K07090 K07090; uncharacterized protein
D      NKI27_15930 sulfite exporter TauE/SafE family protein	K07090 K07090; uncharacterized protein
D      NKI27_18075 sulfite exporter TauE/SafE family protein	K07090 K07090; uncharacterized protein
D      NKI27_18555 sulfite exporter TauE/SafE family protein	K07090 K07090; uncharacterized protein
D      NKI27_06385 hypoxanthine phosphoribosyltransferase	K07101 K07101; uncharacterized protein
D      NKI27_02530 YeeE/YedE family protein	K07112 K07112; uncharacterized protein
D      NKI27_02535 YeeE/YedE family protein	K07112 K07112; uncharacterized protein
D      NKI27_13430 TIGR01212 family radical SAM protein	K07139 K07139; uncharacterized protein
D      NKI27_08335 MOSC domain-containing protein	K07140 K07140; MOSC domain-containing protein
D      NKI27_15885 LON peptidase substrate-binding domain-containing protein	K07157 K07157; uncharacterized protein
D      NKI27_19270 yidD; membrane protein insertion efficiency factor YidD	K08998 K08998; uncharacterized protein
D      NKI27_17835 GatB/YqeY domain-containing protein	K09117 K09117; uncharacterized protein
D      NKI27_15815 DUF493 domain-containing protein	K09158 K09158; uncharacterized protein
D      NKI27_08705 YcgN family cysteine cluster protein	K09160 K09160; uncharacterized protein
D      NKI27_08565 DUF1365 domain-containing protein	K09701 K09701; uncharacterized protein
D      NKI27_18410 YaiI/YqxD family protein	K09768 K09768; uncharacterized protein
D      NKI27_11515 YciI family protein	K09780 K09780; uncharacterized protein
D      NKI27_18725 DUF808 domain-containing protein	K09781 K09781; uncharacterized protein
D      NKI27_15420 YeaH/YhbH family protein	K09786 K09786; uncharacterized protein
D      NKI27_18690 YbaN family protein	K09790 K09790; uncharacterized protein
D      NKI27_09540 Trm112 family protein	K09791 K09791; uncharacterized protein
D      NKI27_11205 sulfite exporter TauE/SafE family protein	K09792 K09792; uncharacterized protein
D      NKI27_15560 SIMPL domain-containing protein	K09797 K09797; uncharacterized protein
D      NKI27_03535 RnfH family protein	K09801 K09801; uncharacterized protein
D      NKI27_11655 nqrM; (Na+)-NQR maturation NqrM	K05952 K05952; uncharacterized protein
D      NKI27_13145 S1-like domain-containing RNA-binding protein	K00243 K00243; uncharacterized protein
D      NKI27_07475 yaaA; peroxide stress protein YaaA	K09861 K09861; uncharacterized protein
D      NKI27_14010 yacG; DNA gyrase inhibitor YacG	K09862 K09862; uncharacterized protein
D      NKI27_18460 YheU family protein	K09898 K09898; uncharacterized protein
D      NKI27_08700 YcgL domain-containing protein	K09902 K09902; uncharacterized protein
D      NKI27_18485 DUF2058 domain-containing protein	K09912 K09912; uncharacterized protein
D      NKI27_06820 YeaC family protein	K09916 K09916; uncharacterized protein
D      NKI27_03220 YebG family protein	K09918 K09918; uncharacterized protein
D      NKI27_18520 GNAT family N-acetyltransferase	K09919 K09919; uncharacterized protein
D      NKI27_17075 DUF1249 domain-containing protein	K09920 K09920; uncharacterized protein
D      NKI27_09510 DUF2062 domain-containing protein	K09928 K09928; uncharacterized protein
D      NKI27_04395 DUF2065 domain-containing protein	K09937 K09937; uncharacterized protein
D      NKI27_16595 DUF1415 domain-containing protein	K09941 K09941; uncharacterized protein
D      NKI27_01325 DUF1244 domain-containing protein	K09948 K09948; uncharacterized protein
D      NKI27_15645 DUF3299 domain-containing protein	K09950 K09950; uncharacterized protein
D      NKI27_18680 DUF3820 family protein	K09954 K09954; uncharacterized protein
D      NKI27_03035 DUF2237 domain-containing protein	K09966 K09966; uncharacterized protein
D      NKI27_10170 DUF1285 domain-containing protein	K09986 K09986; uncharacterized protein
D      NKI27_08740 VWA domain-containing protein	K09989 K09989; uncharacterized protein
!
#<hr>
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#Last updated: June 15, 2024