+E Transcription factors KO
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Transcription Factors - Arcticibacterium luteifluviistationis
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D DJ013_04255 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D DJ013_08825 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D DJ013_00535 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D DJ013_20265 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D DJ013_02395 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D DJ013_17095 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D DJ013_16470 AraC family transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D DJ013_14665 GyrI-like domain-containing protein K13653 K13653; AraC family transcriptional regulator
D DJ013_03850 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D DJ013_09405 hypothetical protein K07506 K07506; AraC family transcriptional regulator
D DJ013_07245 cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D DJ013_12995 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
C DeoR family
C LacI family
D DJ013_17795 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DJ013_17960 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DJ013_09485 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DJ013_05420 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DJ013_14475 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DJ013_10145 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DJ013_19500 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DJ013_16025 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DJ013_09080 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
C GntR family
D DJ013_02620 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DJ013_08705 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D DJ013_14715 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D DJ013_04220 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D DJ013_09025 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D DJ013_19045 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D DJ013_04390 TetR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
C Lrp/AsnC family
D DJ013_06250 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D DJ013_14165 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DJ013_03375 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DJ013_18020 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DJ013_09290 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DJ013_01895 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
C MarR family
D DJ013_17705 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DJ013_08860 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D DJ013_12900 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
C Fur family
D DJ013_06440 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DJ013_17015 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
C IclR family
C CRP/FNR family
D DJ013_01860 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DJ013_02495 hypothetical protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DJ013_10255 cyclic nucleotide-binding protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
C ArsR family
D DJ013_08555 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
C XRE family
D DJ013_20840 XRE family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
C PadR family
D DJ013_21890 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D DJ013_14125 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D DJ013_00055 iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D DJ013_02930 hypothetical protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D DJ013_12295 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DJ013_21595 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DJ013_18270 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DJ013_12660 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DJ013_21770 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D DJ013_03085 hypothetical protein K02019 modE; molybdate transport system regulatory protein
D DJ013_03100 tobe domain protein K02019 modE; molybdate transport system regulatory protein
D DJ013_03625 transcriptional regulator K07727 K07727; putative transcriptional regulator
D DJ013_00850 transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D DJ013_10990 aldehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D DJ013_07015 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DJ013_03670 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DJ013_07655 antitermination protein NusG K05785 rfaH; transcriptional antiterminator RfaH
D DJ013_13650 antitermination protein NusG K05785 rfaH; transcriptional antiterminator RfaH
D DJ013_20930 sugar kinase K15545 mlc; transcriptional regulator of PTS gene
D DJ013_21540 hypothetical protein K03973 pspC; phage shock protein C
D DJ013_21545 PspC domain-containing protein K03973 pspC; phage shock protein C
D DJ013_09585 PspC domain-containing protein K03973 pspC; phage shock protein C
D DJ013_13195 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DJ013_00265 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DJ013_16700 hypothetical protein K07735 algH; putative transcriptional regulator
D DJ013_17260 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0