+D
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transfer RNA Biogenesis - Aquitalea magnusonii</h2>
%<!-- w=600, -->
!
A<b>Eukaryotic type</b>
B  5'processing factors
C    Ribonucrease P
B  3'processing and CCA adding factors
C    3'processing factors
D      DLM_3989 ribonuclease Z	K00784 rnz; ribonuclease Z [EC:3.1.26.11] 
C    CCA adding factors
D      DLM_1135 tRNA nucleotidyltransferase	K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] 
B  tRNA spricing factors
C    tRNA splicing endonuclease complex
C    tRNA splicing ligase complex
C    Other tRNA splicing factors
B  tRNA transport factors
C    tRNA export factors
C    tRNA import factors
B  Aminoacyl-tRNA synthetases (AARSs)
C    Multi-aminoacyl-tRNA synthetase complex (MSC)
D      DLM_2505 glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
D      DLM_3741 prolyl-tRNA synthetase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] 
D      DLM_3060 isoleucyl-tRNA synthetase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] 
D      DLM_3796 leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] 
D      DLM_0426 methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] 
D      DLM_0689 glutaminyl-tRNA synthetase	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] 
D      DLM_1169 arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] 
D      DLM_0344 lysyl-tRNA synthetase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] 
D      DLM_3182 aspartyl-tRNA synthetase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] 
C    Other AARSs
D      DLM_2595 alanyl-tRNA synthetase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] 
D      DLM_2405 threonyl-tRNA synthetase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] 
D      DLM_1187 seryl-tRNA synthetase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] 
D      DLM_0691 cysteinyl-tRNA synthetase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] 
D      DLM_2525 valyl-tRNA synthetase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] 
D      DLM_0570 histidyl-tRNA synthetase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] 
D      DLM_2401 phenylalanyl-tRNA synthetase alpha chain	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] 
D      DLM_2400 phenylalanyl-tRNA synthetase beta chain	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] 
D      DLM_1174 tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] 
D      DLM_3161 tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] 
D      DLM_0295 tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] 
C    Trans-editing factors
D      DLM_0433 D-tyrosyl-tRNA(Tyr) deacylase	K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] 
D      DLM_3195 Ser-tRNA(Ala) deacylase	K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] 
C    AARS associated factors
D      DLM_3703 diadenosine tetraphosphate hydrolase	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] 
B  tRNA modification factors
C    Deaminases
C    Dihydorouridine synthases
C    Methylthiotransferase
C    Methyltransferases
D      DLM_0112 tRNA (guanine46-N7-)-methyltransferase	K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] 
D      DLM_3673 uncharacterized conserved protein	K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] 
C    Psudouridine synthases
D      DLM_2458 tRNA pseudouridine synthase A	K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] 
D      DLM_2569 tRNA pseudouridine synthase B	K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] 
C    Thiolation factors
D      DLM_3220 cysteine desulfurase, IscS subfamily	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
C    KEOPS/EKC complex
C    Elongator complex
C    Elongator related proteins
C    Other tRNA modification factors
D      DLM_3757 TsaC protein	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
D      DLM_1688 TsaC protein	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
D      DLM_2416 tRNA dimethylallyltransferase	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] 
D      DLM_4108 GTPase and tRNA-U34 5-formylation enzyme TrmE	K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] 
D      DLM_3671 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 
D      DLM_1040 selenide water dikinase	K01008 selD; selenide, water dikinase [EC:2.7.9.3] 
B  tRNA degradation factors
C    TRAMP complex
C    Rapid tRNA decay (RTD) pathway factors
C    Other tRNA degradation factors
#
A<b>Prokaryotic type</b>
B  5'processing factors
C    Ribonucrease P
D      DLM_4105 ribonuclease P protein component	K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] 
B  3'processing and CCA adding factors
C    3'processing factors
D      DLM_3989 ribonuclease Z	K00784 rnz; ribonuclease Z [EC:3.1.26.11] 
D      DLM_0019 ribonuclease PH	K00989 rph; ribonuclease PH [EC:2.7.7.56] 
D      DLM_4135 exoribonuclease II	K01147 rnb; exoribonuclease II [EC:3.1.13.1] 
C    CCA adding factors
D      DLM_1135 tRNA nucleotidyltransferase	K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] 
B  tRNA spricing factors
C    tRNA splicing endonucleases
C    tRNA splicing ligases
C    Other tRNA splicing factors
B  tRNA transport factors
C    tRNA export factors
D      DLM_0229 glutathione-regulated potassium-efflux system ATP-binding protein	K06020 ettA; energy-dependent translational throttle protein EttA 
B  Aminoacyl-tRNA synthetases (AARSs)
C    Multi-aminoacyl-tRNA synthetase complex (MSC)
D      DLM_3796 leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] 
D      DLM_3741 prolyl-tRNA synthetase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] 
C    Other AARSs
D      DLM_1174 tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] 
D      DLM_3161 tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] 
D      DLM_0295 tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] 
D      DLM_2405 threonyl-tRNA synthetase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] 
D      DLM_3060 isoleucyl-tRNA synthetase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] 
D      DLM_0344 lysyl-tRNA synthetase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] 
D      DLM_2595 alanyl-tRNA synthetase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] 
D      DLM_2525 valyl-tRNA synthetase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] 
D      DLM_0426 methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] 
D      DLM_1187 seryl-tRNA synthetase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] 
D      DLM_3182 aspartyl-tRNA synthetase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] 
D      DLM_3008 Glycyl-tRNA synthetase alpha chain	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] 
D      DLM_3006 Glycyl-tRNA synthetase beta chain	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] 
D      DLM_0691 cysteinyl-tRNA synthetase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] 
D      DLM_2505 glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
D      DLM_0689 glutaminyl-tRNA synthetase	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] 
D      DLM_1169 arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] 
D      DLM_2401 phenylalanyl-tRNA synthetase alpha chain	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] 
D      DLM_2400 phenylalanyl-tRNA synthetase beta chain	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] 
D      DLM_0570 histidyl-tRNA synthetase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] 
D      DLM_2883 glutamyl-Q-tRNA synthetase	K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] 
C    Trans-editing factors
D      DLM_0433 D-tyrosyl-tRNA(Tyr) deacylase	K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] 
D      DLM_1736 hypothetical protein	K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] 
D      DLM_3195 Ser-tRNA(Ala) deacylase	K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] 
B  tRNA modification factors
C    Deaminases
D      DLM_2921 tRNA-specific adenosine-34 deaminase	K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] 
C    Dihydorouridine synthases
D      DLM_0034 tRNA dihydrouridine synthase A	K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] 
D      DLM_3764 tRNA dihydrouridine synthase B	K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] 
D      DLM_1643 tRNA-dihydrouridine synthase C	K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] 
C    Methylthiotransferases
D      DLM_4427 tRNA-i(6)A37 methylthiotransferase	K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] 
C    Methyltransferases
D      DLM_3284 tRNA:Cm32/Um32 methyltransferase	K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] 
D      DLM_0112 tRNA (guanine46-N7-)-methyltransferase	K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] 
D      DLM_3308 tRNA (Guanine37-N1) -methyltransferase	K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] 
D      DLM_4108 GTPase and tRNA-U34 5-formylation enzyme TrmE	K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] 
D      DLM_4162 tRNA (cytidine(34)-2'-O)-methyltransferase	K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] 
D      DLM_3673 uncharacterized conserved protein	K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] 
D      DLM_1132 rRNA methylase	K03437 spoU; RNA methyltransferase, TrmH family 
C    Psudouridine synthases
D      DLM_2458 tRNA pseudouridine synthase A	K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] 
D      DLM_2569 tRNA pseudouridine synthase B	K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] 
D      DLM_1485 tRNA pseudouridine synthase C	K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] 
D      DLM_3194 ribosomal large subunit pseudouridine synthase A	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] 
D      DLM_0368 ribosomal large subunit pseudouridine synthase D	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] 
C    Thiolation factors
D      DLM_2426 tRNA-specific 2-thiouridylase MnmA	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] 
D      DLM_4443 tRNA(cytosine32)-2-thiocytidine synthetase	K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA 
D      DLM_4211 molybdopterin biosynthesis protein MoeB	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] 
D      DLM_3222 iron binding protein IscA for iron-sulfur cluster assembly	K13628 iscA; iron-sulfur cluster assembly protein 
D      DLM_3220 cysteine desulfurase, IscS subfamily	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
D      DLM_2367 folate-dependent protein	K06980 ygfZ; tRNA-modifying protein YgfZ 
C    KEOPS/EKC complex
C    Other tRNA modification factors
D      DLM_3671 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 
D      DLM_2416 tRNA dimethylallyltransferase	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] 
D      DLM_1038 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] 
D      DLM_0170 S-adenosylmethionine:tRNA ribosyltransferase-isomerase	K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] 
D      DLM_2987 queuosine Biosynthesis QueC ATPase	K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] 
D      DLM_2988 6-carboxytetrahydropterin synthase	K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] 
D      DLM_2989 queuosine Biosynthesis QueE radical SAM	K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] 
D      DLM_3191 NADPH dependent preQ0 reductase	K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] 
D      DLM_0089 epoxyqueuosine reductase QueG	K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] 
D      DLM_1040 selenide water dikinase	K01008 selD; selenide, water dikinase [EC:2.7.9.3] 
D      DLM_1039 selenophosphate-dependent tRNA 2-selenouridine synthase	K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] 
D      DLM_2408 tRNA-guanine transglycosylase	K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] 
D      DLM_1087 tRNA(Ile)-lysidine synthetase	K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] 
D      DLM_2901 TsaB protein	K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB 
D      DLM_3757 TsaC protein	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
D      DLM_1688 TsaC protein	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
D      DLM_2450 TsaD/Kae1/Qri7 protein	K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] 
D      DLM_0088 TsaE protein	K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE 
D      DLM_4218 molybdopterin biosynthesis protein MoeB	K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase 
B  tRNA degradation factors
C    DLM_0588 3'-to-5' exoribonuclease RNase R	K12573 rnr; ribonuclease R [EC:3.1.13.1] 
C    DLM_2567 polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
!
#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: February 29, 2024