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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Amycolatopsis mediterranei U32</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
D      Pol II specific subunits
D      Pol I, II, III common subunits
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
D      TFIIB
D      TFIID
D      TFIIE
D      TFIIF
D      TFIIH
E        AMED_8547 DNA excision repair protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
C    Mediator complex
D      Head
D      Middle
D      Tail
D      CDK-module
D      Other mediators
C    Coactivators
D      SAGA/TFTC/STAGA complex
D      BAF/PBAF complex
D      SWI/SNF complex
D      RSC complex
D      Others
C    Other transcription-related factors
D      Transcription elongation factors
D      Transcription termination factor
D      PAF1 complex
D      NELF complex
D      Super elongation complex (SEC)
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
D      DBIRD complex
D      Others
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
D      Pol III specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
D      TFIIIC
D      TFIIIC, fungi type
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
D      Octamer transcription factors
D      Others
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
D      Pol I specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      SL1/TIF-1B
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
D      Transcription elongation factors
D      NoRC (nucleolar remodeling complex)
D      CTDK-I complex
D      Transcription termination factors
D      Others
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A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        AMED_0708 rpoA; DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        AMED_0656 rpoB; DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        AMED_0657 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        AMED_2756 rpoZ; DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] 
D      Sigma factors
E        AMED_2601 rpoD; RNA polymerase primary sigma factor	K03086 rpoD; RNA polymerase primary sigma factor 
E        AMED_2568 rpoS; RNA polymerase primary-like sigma factor	K03087 rpoS; RNA polymerase nonessential primary-like sigma factor 
E        AMED_6079 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_6373 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_7499 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_9351 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_4177 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_2731 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_4689 rpoE; RNA polymerase ECF-subfamily sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_7975 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_0475 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_6588 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_2953 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_2991 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_3519 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_3616 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_2541 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_7004 rpoE; RNA polymerase ECF-subfamily sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_8214 rpoE; ECF subfamily RNA polymerase sigma-24 factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_9148 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_2019 rpoE; RNA polymerase ECF-subfamily sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_0110 rpoE; ECF subfamily RNA polymerase sigma-24 factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_1179 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_1843 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_5611 putative RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_6181 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_3930 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_6376 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_4702 rpoE; RNA polymerase ECF-subfamily sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_0768 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_3183 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_4376 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_7508 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_7510 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_3760 rpoE; ECF subfamily RNA polymerase sigma-24 factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_8657 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_2462 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_3660 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_2676 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_6529 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_6530 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_1067 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_0076 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_8270 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_8674 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_0965 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_1938 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_6408 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_0887 rpoE; RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        AMED_5213 sigB; RNA polymerase sigma factor	K03090 sigB; RNA polymerase sigma-B factor 
E        AMED_6223 sigB; RNA polymerase sigma factor	K03090 sigB; RNA polymerase sigma-B factor 
E        AMED_0289 sigB; RNA polymerase sigma factor	K03090 sigB; RNA polymerase sigma-B factor 
E        AMED_1971 RNA polymerase sigma factor	K02405 fliA; RNA polymerase sigma factor FliA 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
E        AMED_6340 nusA; transcription elongation factor NusA	K02600 nusA; transcription termination/antitermination protein NusA 
E        AMED_2742 nusB; transcription antiterminator NusB	K03625 nusB; transcription antitermination protein NusB 
E        AMED_0594 nusG; transcription antiterminator NusG	K02601 nusG; transcription termination/antitermination protein NusG 
E        AMED_3051 putative anti-sigma regulatory factor, serine/threonine protein kinase	K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] 
E        AMED_3052 anti-anti-sigma factor	K17762 rsbS; rsbT antagonist protein RsbS 
E        AMED_3053 anti-anti-sigma factor	K17763 rsbR; rsbT co-antagonist protein RsbR 
E        AMED_7427 serine/threonine phosphatase	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        AMED_7426 hydrolase	K19707 rsbQ; sigma-B regulation protein RsbQ 
E        AMED_5589 rsbV; putative anti-anti-sigma factor	K04749 rsbV; anti-sigma B factor antagonist 
E        AMED_5212 anti-sigma factor	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] 
E        AMED_0290 anti-sigma factor	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] 
E        AMED_5890 putative anti-sigma regulatory factor, serine/threonine protein kinase	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] 
D      Transcription elongation factors
E        AMED_8092 greA; transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA 
E        AMED_8764 greA; transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA 
D      Transcription termination factor
E        AMED_7792 rho; transcription termination factor Rho	K03628 rho; transcription termination factor Rho 
E        AMED_5877 rho; transcription termination factor Rho	K03628 rho; transcription termination factor Rho 
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
D      TFE
D      TFS
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#Last updated: April 9, 2024