+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Anopheles merus</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        121588606 mRNA cap guanine-N7 methyltransferase	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        121591751 mRNA-capping enzyme-like	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        121601242 mRNA-capping enzyme-like	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        121602913 cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        121594145 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        121592562 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        121590210 RNA guanine-N7 methyltransferase activating subunit	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        121588492 nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        121589155 nuclear cap-binding protein subunit 2	K12883 NCBP2; nuclear cap-binding protein subunit 2 
E        121601857 nuclear cap-binding protein subunit 2	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        121593744 cleavage and polyadenylation specificity factor subunit 5	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        121593505 cleavage and polyadenylation specificity factor subunit 6 isoform X1	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        121591405 protein CLP1 homolog	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        121599684 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        121587797 probable cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        121588129 cleavage and polyadenylation specificity factor 73-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        121587767 cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        121589841 pre-mRNA 3'-end-processing factor FIP1	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        121588418 pre-mRNA 3' end processing protein WDR33	K15542 PFS2; polyadenylation factor subunit 2 
E        121596100 WD repeat-containing protein 82	K14962 WDR82; COMPASS component SWD2 
E        121600203 serine/threonine-protein phosphatase alpha-2 isoform isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        121602327 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        121600532 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        121603546 cleavage stimulation factor subunit 1	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        121598346 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        121590686 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        121587713 protein suppressor of forked	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        121603706 symplekin	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        121591946 small nuclear ribonucleoprotein-associated protein B	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        121598545 small nuclear ribonucleoprotein Sm D3	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        121600028 probable small nuclear ribonucleoprotein E	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        121588029 small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        121589006 probable small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        121588443 uncharacterized protein LOC121588443	K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 
E        121594243 U7 snRNA-associated Sm-like protein LSm11	K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 
E        121587797 probable cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        121588129 cleavage and polyadenylation specificity factor 73-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        121598346 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        121590686 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        121603706 symplekin	K06100 SYMPK; symplekin 
E        121603503 histone RNA hairpin-binding protein	K18710 SLBP; histone RNA hairpin-binding protein 
D      DRB sensitivity inducing factor (DSIF) complex
E        121594816 transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        121591539 transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        121588653 N6-adenosine-methyltransferase MT-A70-like protein isoform X1	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        121595276 N6-adenosine-methyltransferase non-catalytic subunit	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        121595371 N(6)-adenine-specific methyltransferase METTL4	K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] 
E        121598652 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        121589500 protein virilizer	K22910 VIRMA; protein virilizer 
E        121592506 RNA-binding protein spenito-like	K13190 RBM15; RNA-binding protein 15 
E        121602737 RNA-binding protein spenito-like	K13190 RBM15; RNA-binding protein 15 
E        121597048 E3 ubiquitin-protein ligase Hakai	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        121590665 poly(A) polymerase beta	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
D      Negative regulators of mRNA 3' end processing
E        121595642 zinc finger protein swm-like	K13192 RBM26; RNA-binding protein 26 
E        121601959 zinc finger protein swm-like	K13192 RBM26; RNA-binding protein 26 
E        121588748 TAR DNA-binding protein 43-like	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      121599191 DNA/RNA-binding protein KIN17	K13102 KIN; DNA/RNA-binding protein KIN17 
D      121599436 methyltransferase-like protein 22 isoform X1	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      121591691 terminal nucleotidyltransferase 5C isoform X1	K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] 
D      121588480 zinc finger CCCH domain-containing protein 13	K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 
D      121598414 serrate RNA effector molecule homolog	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        121592798 RNA-binding protein 8A	K12876 RBM8A; RNA-binding protein 8A 
E        121600012 protein mago nashi	K12877 MAGOH; protein mago nashi 
E        121591969 THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        121596065 ATP-dependent RNA helicase WM6	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        121602693 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        121588569 coiled-coil domain-containing protein 174	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        121599275 ataxin-2 homolog	K14323 CASC3; protein CASC3 
E        121587748 histone deacetylase complex subunit SAP18	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        121589400 pinin	K13114 PNN; pinin 
E        121598030 apoptotic chromatin condensation inducer in the nucleus-like isoform X1	K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus 
E        121597812 RNA-binding protein with serine-rich domain 1-B	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        121592161 serine/arginine repetitive matrix protein 1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        121590418 THO complex subunit 1	K12878 THOC1; THO complex subunit 1 
E        121595865 THO complex subunit 2 isoform X1	K12879 THOC2; THO complex subunit 2 
E        121587872 THO complex subunit 3	K12880 THOC3; THO complex subunit 3 
E        121591969 THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        121593692 THO complex subunit 5 homolog	K13174 THOC5; THO complex subunit 5 
E        121594806 THO complex subunit 6	K13175 THOC6; THO complex subunit 6 
E        121603665 THO complex subunit 7 homolog	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        121595358 PCI domain-containing protein 2 homolog	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        121588498 26S proteasome complex subunit SEM1-like	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        121602087 26S proteasome complex subunit SEM1-like	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        121600450 enhancer of yellow 2 transcription factor-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
D      Nuclear pore complex
E        121601994 nucleoprotein TPR	K09291 TPR; nucleoprotein TPR 
E        121600446 protein Rae1	K14298 RAE1; mRNA export factor 
E        121589861 protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        121598653 nucleoporin Nup37	K14302 NUP37; nuclear pore complex protein Nup37 
E        121598586 nuclear pore complex protein Nup75	K14304 NUP85; nuclear pore complex protein Nup85 
E        121591629 nucleoporin Nup43	K14305 NUP43; nuclear pore complex protein Nup43 
E        121591879 probable nucleoporin Nup54	K14308 NUP54; nuclear pore complex protein Nup54 
E        121599420 nuclear pore glycoprotein p62	K14306 NUP62; nuclear pore complex protein Nup62 
E        121587816 nuclear pore complex protein Nup88	K14318 NUP88; nuclear pore complex protein Nup88 
E        121588605 nuclear pore complex protein Nup93-1	K14309 NUP93; nuclear pore complex protein Nup93 
E        121588897 nuclear pore complex protein Nup98-Nup96	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        121589499 nuclear pore complex protein Nup107	K14301 NUP107; nuclear pore complex protein Nup107 
E        121588932 nuclear pore complex protein Nup133	K14300 NUP133; nuclear pore complex protein Nup133 
E        121594667 nucleoporin Nup188-like	K14311 NUP188; nuclear pore complex protein Nup188 
E        121601598 LOW QUALITY PROTEIN: nucleoporin Nup188-like	K14311 NUP188; nuclear pore complex protein Nup188 
E        121593317 nucleoporin Nup188-like isoform X1	K14311 NUP188; nuclear pore complex protein Nup188 
E        121590280 nuclear pore complex protein Nup153	K14296 NUP153; nuclear pore complex protein Nup153 
E        121597840 nuclear pore complex protein Nup154 isoform X1	K14312 NUP155; nuclear pore complex protein Nup155 
E        121603588 nuclear pore complex protein Nup160 homolog isoform X1	K14303 NUP160; nuclear pore complex protein Nup160 
E        121597554 nucleoporin Nup35	K14313 NUP35; nuclear pore complex protein Nup53 
E        121596379 nuclear pore complex protein Nup205	K14310 NUP205; nuclear pore complex protein Nup205 
E        121594781 nuclear pore membrane glycoprotein 210	K14314 NUP210; nuclear pore complex protein Nup210 
E        121598017 nuclear pore complex protein Nup214 isoform X1	K14317 NUP214; nuclear pore complex protein Nup214 
E        121597156 nuclear pore complex protein Nup58	K14307 NUPL1; nucleoporin p58/p45 
E        121597985 nucleoporin AMO1-like	K14321 NUPL2; nucleoporin-like protein 2 
E        121603429 nucleoporin Ndc1	K14315 NDC1; nucleoporin NDC1 
E        121601397 nucleoporin seh1	K14299 SEH1; nucleoporin SEH1 
E        121592249 nucleoporin seh1-like	K14299 SEH1; nucleoporin SEH1 
E        121589373 E3 SUMO-protein ligase RanBP2	K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] 
E        121600045 aladin-like	K14320 AAAS; aladin 
E        121599263 nucleoporin Gle1	K18723 GLE1; nucleoporin GLE1 
E        121588551 nuclear RNA export factor 1	K14284 NXF; nuclear RNA export factor 
E        121597362 NTF2-related export protein	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        121591409 GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        121595237 ELAV-like protein 3 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        121595633 ELAV-like protein 2	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        121589176 protein elav isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        121597847 FAS-associated factor 2	K18726 FAF2; FAS-associated factor 2 
E        121591951 transitional endoplasmic reticulum ATPase TER94	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        121596638 exportin-1	K14290 XPO1; exportin-1 
E        121587680 ran-binding protein 16	K18460 XPO7; exportin-7 
E        121597730 ran GTPase-activating protein	K14319 RANGAP1; Ran GTPase-activating protein 1 
D      eIF4F and regulatory proteins
E        121590756 eukaryotic translation initiation factor 4E type 2	K03259 EIF4E; translation initiation factor 4E 
E        121594309 eukaryotic translation initiation factor 4E isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        121595813 eukaryotic initiation factor 4A	K03257 EIF4A; translation initiation factor 4A 
E        121588430 eukaryotic translation initiation factor 4G-like	K03260 EIF4G; translation initiation factor 4G 
E        121594287 eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        121590620 eukaryotic translation initiation factor 4B-like isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        121588905 eukaryotic translation initiation factor 4H-like isoform X1	K24086 EIF4H; translation initiation factor 4H 
E        121597741 eukaryotic translation initiation factor 4E-binding protein	K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 
E        121599841 protein angel	K18729 ANGEL; protein angel 
E        121588141 cytoplasmic FMR1-interacting protein	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        121588950 translational regulator orb2-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121587710 ATP-dependent RNA helicase bel	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        121599833 polyadenylate-binding protein	K13126 PABPC; polyadenylate-binding protein 
E        121598296 polyadenylate-binding protein-interacting protein 1-like isoform X1	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        121587963 polyadenylate-binding protein-interacting protein 2B	K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
E        121589853 helicase SKI2W	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        121592485 deformed epidermal autoregulatory factor 1	K23041 DEAF1; deformed epidermal autoregulatory factor 1 
E        121587642 malignant T-cell-amplified sequence 1 homolog	K07575 MCTS; malignant T-cell-amplified sequence 
E        121592749 density-regulated protein homolog	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
D      Other transport factors
E        121593093 partner of Y14 and mago	K14294 WIBG; partner of Y14 and mago 
E        121587613 heterogeneous nuclear ribonucleoprotein 87F	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        121589397 RNA-binding protein Musashi homolog 1 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        121589929 heterogeneous nuclear ribonucleoprotein 27C	K14411 MSI; RNA-binding protein Musashi 
E        121592988 RNA-binding protein Musashi homolog Rbp6 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        121589675 HBS1-like protein	K14416 HBS1; elongation factor 1 alpha-like protein 
E        121597731 protein pelota	K06965 PELO; protein pelota 
E        121592129 polyadenylate-binding protein 2-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        121588675 DEAD-box helicase Dbp80	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        121600441 pre-mRNA-splicing factor syf1 homolog	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        121590923 SAP domain-containing ribonucleoprotein	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        121588739 LOW QUALITY PROTEIN: regulator of chromosome condensation-like	K11493 RCC1; regulator of chromosome condensation 
E        121601750 regulator of chromosome condensation-like	K11493 RCC1; regulator of chromosome condensation 
E        121591891 uncharacterized protein LOC121591891	K18733 LARP6; la-related protein 6 
E        121600646 transcriptional activator protein Pur-alpha	K21772 PURA; transcriptional activator protein Pur-alpha 
E        121594352 uncharacterized protein LOC121594352	K22414 POLDIP3; polymerase delta-interacting protein 3 
E        121598100 leukocyte receptor cluster member 8	K23802 LENG8; SAC3 family protein LENG8/THP3 
C    Surveillance factors
D      Surveillance complex
E        121601299 LOW QUALITY PROTEIN: eukaryotic peptide chain release factor subunit 1-like	K03265 ETF1; peptide chain release factor subunit 1 
E        121602062 eukaryotic peptide chain release factor subunit 1	K03265 ETF1; peptide chain release factor subunit 1 
E        121598031 eukaryotic peptide chain release factor GTP-binding subunit ERF3A	K03267 ERF3; peptide chain release factor subunit 3 
E        121589263 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        121593346 regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
D      Protein phosphatase 2A
E        121595315 serine/threonine-protein phosphatase PP2A	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        121598105 serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        121590275 protein phosphatase PP2A 55 kDa regulatory subunit isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        121599842 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        121590341 uncharacterized protein LOC121590341 isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        121597784 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        121599907 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        121589538 serine/threonine-protein kinase Smg1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        121597415 protein SMG5	K11125 SMG5; protein SMG5 
E        121592054 telomerase-binding protein EST1A isoform X1	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        121595687 protein SMG8	K18734 SMG8; protein SMG8 
E        121592566 protein SMG9-like	K18735 SMG9; protein SMG9 
E        121587699 selenocysteine insertion sequence-binding protein 2	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        121587650 probable ATP-dependent RNA helicase DHX34	K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] 
E        121593033 GTP-binding protein 1	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        121595807 LOW QUALITY PROTEIN: protein penguin-like	K14844 PUF6; pumilio homology domain family member 6 
E        121589604 protein penguin-like	K14844 PUF6; pumilio homology domain family member 6 
E        121592041 unconventional myosin-Va isoform X1	K10357 MYO5; myosin V 
E        121596829 protein bicaudal D-like	K18739 BICD; protein bicaudal D 
E        121602398 protein bicaudal D-like	K18739 BICD; protein bicaudal D 
E        121594662 uncharacterized protein LOC121594662	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
D      Factors that have mRNA localization signals
E        121587822 actin-5C	K05692 ACTB_G1; actin beta/gamma 1 
E        121593723 T-box transcription factor TBX6-like	K10180 TBX6; T-box protein 6 
E        121594053 T-box transcription factor TBX6-like	K10180 TBX6; T-box protein 6 
E        121591535 protein nanos isoform X1	K18741 NANOS1; protein nanos 1 
E        121589291 uncharacterized protein LOC121589291 isoform X1	K18742 OSK; maternal effect protein oskar 
E        121593266 protein hairy	K09090 HESN; hairy and enhancer of split, invertebrate 
E        121600036 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        121600315 transcription factor HES-4-like	K09090 HESN; hairy and enhancer of split, invertebrate 
D      Trans-acting binding proteins
E        121598623 far upstream element-binding protein 2 isoform X1	K13210 FUBP; far upstream element-binding protein 
E        121593126 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        121588391 elongation factor 1-gamma	K03233 EEF1G; elongation factor 1-gamma 
E        121603709 polypyrimidine tract-binding protein 1 isoform X1	K13218 PTBP1; polypyrimidine tract-binding protein 1 
E        121597457 RNA-binding protein squid-like isoform X1	K03102 SQD; squid 
E        121594127 RNA-binding protein squid-like	K03102 SQD; squid 
E        121588950 translational regulator orb2-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        121588141 cytoplasmic FMR1-interacting protein	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        121594278 poly(rC)-binding protein 3 isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        121597432 CUGBP Elav-like family member 2 isoform X1	K02177 BRU; bruno 
E        121594593 maternal protein exuperantia-like isoform X1	K18745 EXU; maternal protein exuperantia 
E        121593279 maternal protein exuperantia-like isoform X1	K18745 EXU; maternal protein exuperantia 
E        121594689 Y-box-binding protein 1	K09276 YBX1; Y-box-binding protein 1 
E        121590260 protein sex-lethal-like isoform X1	K18747 SXL; protein sex-lethal 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        121590674 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        121599295 protein argonaute-2-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        121600539 protein argonaute-2 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        121601350 LOW QUALITY PROTEIN: protein argonaute-2-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        121590756 eukaryotic translation initiation factor 4E type 2	K03259 EIF4E; translation initiation factor 4E 
E        121594309 eukaryotic translation initiation factor 4E isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        121589263 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        121587710 ATP-dependent RNA helicase bel	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        121597981 ATP-dependent RNA helicase me31b	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        121591908 PE-PGRS family protein PE_PGRS30-like	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        121594689 Y-box-binding protein 1	K09276 YBX1; Y-box-binding protein 1 
E        121587675 LOW QUALITY PROTEIN: LIM domain-containing protein jub-like	K16682 AJUBA; LIM domain-containing protein 
E        121602326 LIM domain-containing protein jub-like isoform X1	K16682 AJUBA; LIM domain-containing protein 
E        121599896 putative helicase MOV-10 isoform X1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        121594668 transportin-1	K18752 TNPO1; transportin-1 
E        121589538 serine/threonine-protein kinase Smg1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        121597415 protein SMG5	K11125 SMG5; protein SMG5 
E        121592054 telomerase-binding protein EST1A isoform X1	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        121598337 protein TIS11	K15308 TTP; tristetraprolin 
E        121593945 protein lin-28 homolog	K18754 LIN28; protein lin-28 
E        121588197 huntingtin	K04533 HD; huntingtin 
E        121596636 protein bicaudal C	K18756 BICC1; protein bicaudal C 
E        121587613 heterogeneous nuclear ribonucleoprotein 87F	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        121596820 cAMP-dependent protein kinase catalytic subunit alpha-like	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        121588205 cAMP-dependent protein kinase catalytic subunit 1	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        121591454 la-related protein 1 isoform X1	K18757 LARP1; la-related protein 1 
D      P-body specific factors
E        121596671 mRNA-decapping enzyme 1A	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        121589502 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        121602425 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        121592808 LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        121603622 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        121597629 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        121593813 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        121594075 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        121596518 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        121600653 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        121596838 kinesin light chain-like	K10407 KLC; kinesin light chain 
E        121602923 kinesin light chain-like	K10407 KLC; kinesin light chain 
E        121592041 unconventional myosin-Va isoform X1	K10357 MYO5; myosin V 
E        121588134 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        121588135 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        121589562 tubulin alpha chain-like isoform X1	K07374 TUBA; tubulin alpha 
E        121599630 tubulin alpha-1 chain	K07374 TUBA; tubulin alpha 
E        121590932 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        121591819 tubulin alpha-8 chain-like isoform X1	K07374 TUBA; tubulin alpha 
E        121588950 translational regulator orb2-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121597059 protein Gawky-like	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        121595506 protein Gawky-like	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        121597058 protein Gawky-like	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        121597669 CCR4-NOT transcription complex subunit 1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        121589709 regulator of gene activity isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        121597965 CCR4-NOT transcription complex subunit 3 isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        121597343 myb-like protein Q isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        121589849 CCR4-NOT transcription complex subunit 6-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        121598799 CCR4-NOT transcription complex subunit 7-like isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        121601470 CCR4-NOT transcription complex subunit 7-like isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        121598640 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        121592163 PAN2-PAN3 deadenylation complex subunit PAN3	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        121595157 maternal B9.15 protein-like	K14443 TOB; protein Tob/BTG 
E        121591723 protein PAT1 homolog 1-like	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        121595978 protein PAT1 homolog 1-like	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        121589626 enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        121595914 enhancer of mRNA-decapping protein 4 homolog isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        121593346 regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
E        121594703 protein wech-like	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        121602935 protein wech-like	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        121591753 RING finger protein nhl-1 isoform X1	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        121589209 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        121590075 YTH domain-containing family protein-like	K20102 YTHDF; YTH domain-containing family protein 
E        121601388 YTH domain-containing family protein-like	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        121590648 nucleolysin TIAR	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        121591824 nucleolysin TIAR	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        121599833 polyadenylate-binding protein	K13126 PABPC; polyadenylate-binding protein 
E        121603766 RNA-binding protein FUS	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        121603627 eukaryotic translation initiation factor 2A	K15026 EIF2A; translation initiation factor 2A 
E        121598328 eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        121595813 eukaryotic initiation factor 4A	K03257 EIF4A; translation initiation factor 4A 
E        121602693 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        121590620 eukaryotic translation initiation factor 4B-like isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        121588430 eukaryotic translation initiation factor 4G-like	K03260 EIF4G; translation initiation factor 4G 
E        121594287 eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        121587709 ribosomal protein S6 kinase 2 beta-like isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        121595693 guanine nucleotide-binding protein subunit beta-like protein	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        121588551 nuclear RNA export factor 1	K14284 NXF; nuclear RNA export factor 
E        121587998 histone deacetylase 6 isoform X1	K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        121596671 mRNA-decapping enzyme 1A	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        121597981 ATP-dependent RNA helicase me31b	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        121589626 enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        121595914 enhancer of mRNA-decapping protein 4 homolog isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        121591723 protein PAT1 homolog 1-like	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        121595978 protein PAT1 homolog 1-like	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
D      Lsm complex
E        121589502 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        121602425 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        121592808 LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        121603622 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        121597629 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        121593813 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        121594075 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        121596518 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        121600653 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        121590674 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        121588687 5'-3' exoribonuclease 2 homolog isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
D      Other 5'-3' decay factors
E        121598368 m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        121599074 uncharacterized protein LOC121599074	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    3'-5' decay
D      Core exosome factors
E        121596295 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
E        121599174 exosome complex component RRP4 isoform X1	K03679 RRP4; exosome complex component RRP4 
E        121597820 exosome complex component RRP40	K03681 RRP40; exosome complex component RRP40 
E        121598847 exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41 
E        121600991 exosome complex component RRP46	K12590 RRP46; exosome complex component RRP46 
E        121599094 exosome complex component MTR3-like	K12587 MTR3; exosome complex component MTR3 
E        121600156 exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
E        121600478 exosome complex component RRP43-like	K12586 RRP43; exosome complex component RRP43 
E        121589281 exosome complex component rrp45	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        121601599 exosome complex exonuclease RRP44-like	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        121593581 exosome complex exonuclease RRP44-like	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        121590976 exosome component 10 isoform X1	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        121594578 uncharacterized protein LOC121594578	K12592 C1D; exosome complex protein LRP1 
E        121599365 uncharacterized protein LOC121599365	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
D      TRAMP complex
E        121590672 non-canonical poly(A) RNA polymerase protein Trf4-1-like	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        121597218 exosome RNA helicase MTR4-like	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
E        121601952 exosome RNA helicase MTR4-like	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        121589853 helicase SKI2W	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        121589330 tetratricopeptide repeat protein 37	K12600 SKI3; superkiller protein 3 
E        121594760 WD repeat-containing protein 61	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        121589849 CCR4-NOT transcription complex subunit 6-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        121597669 CCR4-NOT transcription complex subunit 1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        121589709 regulator of gene activity isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        121597965 CCR4-NOT transcription complex subunit 3 isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        121597343 myb-like protein Q isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        121598799 CCR4-NOT transcription complex subunit 7-like isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        121601470 CCR4-NOT transcription complex subunit 7-like isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        121599996 CCR4-NOT transcription complex subunit 9	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        121597468 CCR4-NOT transcription complex subunit 10	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        121598640 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        121592163 PAN2-PAN3 deadenylation complex subunit PAN3	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
D      Other 3'-5' decay factors
E        121592693 poly(A)-specific ribonuclease PARN-like isoform X1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        121597258 ATP-dependent DNA/RNA helicase DHX36-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        121595157 maternal B9.15 protein-like	K14443 TOB; protein Tob/BTG 
E        121595200 nocturnin isoform X1	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        121598368 m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        121595675 2',5'-phosphodiesterase 12	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        121599074 uncharacterized protein LOC121599074	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
E        121599718 uncharacterized protein LOC121599718	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        121592133 protein Smaug	K27396 SMG; protein Smaug 
E        121591617 uncharacterized protein LOC121591617	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
E        121603735 probable ribonuclease ZC3H12C isoform X1	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        121597229 ribonuclease 3	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        121592776 oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
D      Other RNA degradosome components
E        121598051 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        121599742 polyribonucleotide nucleotidyltransferase 1, mitochondrial	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        121594418 ATP-dependent 6-phosphofructokinase isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        121600329 heat shock 70 kDa protein cognate 5	K04043 dnaK; molecular chaperone DnaK 
E        121589245 heat shock protein 60A	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        121599174 exosome complex component RRP4 isoform X1	K03679 RRP4; exosome complex component RRP4 
E        121596295 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        121598847 exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41 
E        121600156 exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
D      Others
!
#<hr>
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#Last updated: April 25, 2024