+D GENES KO
#
KEGG Orthology (KO) - Aminobacterium sp. MB27-C1
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:amiz00010]
D RBH88_08875 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RBH88_03055 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBH88_02430 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBH88_04910 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RBH88_10840 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RBH88_07450 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBH88_05900 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RBH88_05910 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBH88_01885 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D RBH88_05905 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RBH88_07550 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBH88_08735 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBH88_07345 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RBH88_06510 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBH88_06355 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RBH88_06350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RBH88_01675 dihydrolipoamide acetyltransferase family protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_08210 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RBH88_08205 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RBH88_08220 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RBH88_08215 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RBH88_04750 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RBH88_02600 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_05060 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_06170 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_07870 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_02605 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_05065 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_06165 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_07865 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_01535 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RBH88_07530 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RBH88_08435 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RBH88_01800 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:amiz00020]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_02600 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_05060 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_06170 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_07870 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_02605 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_05065 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_06165 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_07865 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_05070 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RBH88_06160 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RBH88_07860 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RBH88_05055 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RBH88_06175 4Fe-4S dicluster domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RBH88_07845 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RBH88_07850 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RBH88_07855 ATP-grasp domain-containing protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RBH88_10270 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RBH88_06415 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D RBH88_01800 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RBH88_01675 dihydrolipoamide acetyltransferase family protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RBH88_08210 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RBH88_08205 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RBH88_08220 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RBH88_08215 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RBH88_04750 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:amiz00030]
D RBH88_03055 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBH88_08605 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RBH88_02535 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBH88_02540 transketolase C-terminal domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBH88_02920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBH88_02450 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RBH88_00080 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RBH88_09355 hypothetical protein K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RBH88_11530 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RBH88_08435 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RBH88_06440 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RBH88_01155 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RBH88_01065 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RBH88_01070 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RBH88_02955 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D RBH88_07920 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D RBH88_10010 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D RBH88_11335 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D RBH88_04045 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RBH88_10840 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RBH88_07450 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBH88_04910 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RBH88_02430 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:amiz00040]
D RBH88_01040 altronate dehydratase family protein K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D RBH88_01145 UxaA family hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D RBH88_04035 UxaA family hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D RBH88_01150 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D RBH88_04040 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D RBH88_06475 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBH88_08605 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RBH88_08110 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:amiz00051]
D RBH88_08435 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RBH88_08110 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RBH88_02430 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBH88_04910 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RBH88_06545 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RBH88_10840 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RBH88_07450 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBH88_05900 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RBH88_03100 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
C 00052 Galactose metabolism [PATH:amiz00052]
D RBH88_06475 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBH88_08435 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RBH88_08875 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RBH88_02430 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBH88_01075 dgoD; galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:amiz00500]
D RBH88_06475 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBH88_09710 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D RBH88_09695 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RBH88_09705 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RBH88_09700 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RBH88_09580 glycosyltransferase K13057 treT; trehalose synthase [EC:2.4.1.245]
D RBH88_09570 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D RBH88_09575 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D RBH88_08435 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RBH88_08875 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RBH88_03055 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:amiz00520]
D RBH88_06470 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RBH88_06480 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RBH88_06445 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RBH88_05670 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBH88_05975 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RBH88_06860 neuC; UDP-N-acetylglucosamine 2-epimerase K08068 siaA; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D RBH88_06855 acylneuraminate cytidylyltransferase family protein K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D RBH88_00735 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RBH88_05665 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RBH88_00720 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D RBH88_00715 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D RBH88_08875 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RBH88_08435 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RBH88_06475 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBH88_03055 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBH88_03100 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
C 00620 Pyruvate metabolism [PATH:amiz00620]
D RBH88_08210 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RBH88_08205 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RBH88_08220 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RBH88_08215 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RBH88_04750 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RBH88_02600 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_05060 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_06170 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_07870 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_02605 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_05065 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_06165 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_07865 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_01675 dihydrolipoamide acetyltransferase family protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01535 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RBH88_04780 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBH88_06510 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBH88_07530 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RBH88_07295 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RBH88_04120 larA; nickel-dependent lactate racemase K22373 larA; lactate racemase [EC:5.1.2.1]
D RBH88_09755 lactate racemase domain-containing protein K22373 larA; lactate racemase [EC:5.1.2.1]
D RBH88_00310 malic enzyme-like NAD(P)-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RBH88_03135 malic enzyme-like NAD(P)-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RBH88_10275 malic enzyme-like NAD(P)-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RBH88_01880 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_05650 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_09455 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_06415 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D RBH88_10270 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RBH88_01800 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RBH88_06355 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RBH88_06350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBH88_10375 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:amiz00630]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBH88_09475 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RBH88_05625 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RBH88_05620 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RBH88_04450 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D RBH88_01350 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RBH88_02790 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBH88_00345 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBH88_11115 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBH88_01695 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RBH88_00630 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RBH88_00635 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RBH88_01690 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RBH88_01705 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01700 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RBH88_04045 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RBH88_01155 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RBH88_01065 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RBH88_01845 molybdopterin-dependent oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
C 00640 Propanoate metabolism [PATH:amiz00640]
D RBH88_07530 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RBH88_04780 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_08210 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RBH88_08205 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RBH88_08220 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RBH88_08215 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RBH88_01095 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RBH88_00915 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RBH88_09475 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RBH88_05625 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RBH88_05620 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RBH88_07855 ATP-grasp domain-containing protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RBH88_07850 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:amiz00650]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBH88_04230 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RBH88_04235 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RBH88_01130 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D RBH88_11490 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D RBH88_11505 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D RBH88_00035 phosphate acyltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D RBH88_01135 phosphate acyltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D RBH88_11495 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D RBH88_11500 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D RBH88_01880 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_05650 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_09455 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_05645 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RBH88_09460 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RBH88_01095 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RBH88_00915 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RBH88_08210 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RBH88_08205 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RBH88_08220 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RBH88_08215 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RBH88_04750 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RBH88_02600 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_05060 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_06170 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_07870 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_02605 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_05065 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_06165 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_07865 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_03560 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RBH88_03130 NAD(P)-dependent alcohol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
D RBH88_10905 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:amiz00660]
D RBH88_07855 ATP-grasp domain-containing protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RBH88_07850 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RBH88_00805 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RBH88_10380 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RBH88_10385 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RBH88_10390 isocitrate/isopropylmalate family dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:amiz00562]
D RBH88_10770 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RBH88_01125 sugar phosphate isomerase/epimerase family protein K22233 iolO; 5-keto-L-gluconate epimerase [EC:5.1.-.-]
D RBH88_05900 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:amiz00190]
D RBH88_02975 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RBH88_01830 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RBH88_01840 NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RBH88_02970 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RBH88_05205 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RBH88_06055 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RBH88_05210 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RBH88_06050 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RBH88_05195 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D RBH88_06065 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D RBH88_05215 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RBH88_06045 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RBH88_06070 V-type ATP synthase subunit E family protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D RBH88_06060 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D RBH88_06085 cell envelope biogenesis protein TolA K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D RBH88_05180 V-type ATPase 116kDa subunit family protein K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RBH88_06080 V-type ATPase 116kDa subunit family protein K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RBH88_05185 ATPase K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D RBH88_06075 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D RBH88_03910 putative manganese-dependent inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:amiz00710]
D RBH88_05905 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RBH88_05910 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBH88_01885 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D RBH88_10840 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RBH88_07450 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBH88_04910 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RBH88_02535 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBH88_02540 transketolase C-terminal domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBH88_02920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBH88_05900 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RBH88_08605 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RBH88_02450 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RBH88_01800 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RBH88_06355 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:amiz00720]
D RBH88_08210 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RBH88_08205 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RBH88_08220 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RBH88_08215 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RBH88_04750 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RBH88_06350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RBH88_06355 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RBH88_06415 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D RBH88_10270 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RBH88_07850 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RBH88_07855 ATP-grasp domain-containing protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBH88_02600 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_05060 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_06170 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_07870 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBH88_02605 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_05065 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_06165 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_07865 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBH88_05070 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RBH88_06160 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RBH88_07860 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RBH88_05055 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RBH88_06175 4Fe-4S dicluster domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RBH88_07845 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RBH88_09475 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RBH88_05620 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RBH88_05625 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RBH88_01900 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RBH88_01945 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RBH88_01905 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RBH88_11085 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RBH88_01940 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RBH88_04780 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:amiz00680]
D RBH88_01845 molybdopterin-dependent oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RBH88_00345 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBH88_11115 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBH88_04045 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RBH88_07345 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RBH88_10840 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RBH88_07450 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBH88_04910 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RBH88_02430 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBH88_10610 FmdE family protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D RBH88_00695 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D RBH88_04780 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBH88_08210 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RBH88_08205 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RBH88_08220 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RBH88_08215 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RBH88_06350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RBH88_07550 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBH88_08735 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBH88_00870 C-terminal binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBH88_11205 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBH88_02285 cobC; alpha-ribazole phosphatase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D RBH88_02630 histidine phosphatase family protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D RBH88_03805 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D RBH88_01185 Ldh family oxidoreductase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337]
D RBH88_03665 Ldh family oxidoreductase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337]
D RBH88_00810 3-isopropylmalate dehydratase small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
C 00910 Nitrogen metabolism [PATH:amiz00910]
D RBH88_11075 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D RBH88_10090 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RBH88_07375 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RBH88_08715 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RBH88_02790 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBH88_03040 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RBH88_09815 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:amiz00920]
D RBH88_07775 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RBH88_11140 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RBH88_07780 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RBH88_11135 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RBH88_11130 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RBH88_05295 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D RBH88_10395 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RBH88_09870 pyridoxal-phosphate dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RBH88_10400 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:amiz00061]
D RBH88_04825 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RBH88_04815 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RBH88_04805 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RBH88_04830 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RBH88_03125 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_11210 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_04820 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_11305 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_02320 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RBH88_04810 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RBH88_00305 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_01545 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_08695 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:amiz00071]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBH88_00305 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_01545 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_08695 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_01535 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:amiz00561]
D RBH88_04045 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RBH88_04800 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RBH88_07525 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RBH88_04685 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RBH88_10630 glycosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:amiz00564]
D RBH88_01445 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RBH88_07525 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RBH88_04685 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RBH88_05695 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RBH88_09545 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RBH88_09550 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RBH88_02720 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RBH88_08590 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D RBH88_05395 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:amiz00230]
D RBH88_05075 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RBH88_08435 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RBH88_06440 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RBH88_04570 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RBH88_04550 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RBH88_04560 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RBH88_04575 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RBH88_04585 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RBH88_04580 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RBH88_04565 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RBH88_04590 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RBH88_04905 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RBH88_04555 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RBH88_10600 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RBH88_01760 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RBH88_04495 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RBH88_05085 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RBH88_00610 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D RBH88_05600 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RBH88_06240 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RBH88_05250 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RBH88_09300 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RBH88_09630 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D RBH88_05555 FAD binding domain-containing protein K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D RBH88_07390 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RBH88_04705 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RBH88_10240 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RBH88_01795 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RBH88_07305 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RBH88_09400 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RBH88_02570 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RBH88_06460 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D RBH88_02845 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RBH88_07045 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RBH88_06420 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RBH88_11455 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D RBH88_07905 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D RBH88_07900 allB; allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5]
D RBH88_11175 M20 family metallo-hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RBH88_05120 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RBH88_09815 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:amiz00240]
D RBH88_08755 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RBH88_01600 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RBH88_00900 D-aminoacylase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RBH88_01605 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RBH88_01615 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D RBH88_01610 FAD-binding oxidoreductase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D RBH88_10405 dihydroorotate dehydrogenase-like protein K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D RBH88_01625 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RBH88_01620 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RBH88_04435 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RBH88_06420 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RBH88_02520 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RBH88_02465 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RBH88_04680 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RBH88_08410 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RBH88_01760 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RBH88_04495 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RBH88_00610 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D RBH88_05655 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBH88_01595 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBH88_04840 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBH88_02845 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RBH88_05090 thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D RBH88_06390 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RBH88_01795 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RBH88_10240 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RBH88_08505 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RBH88_04870 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RBH88_06675 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RBH88_06570 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RBH88_09820 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:amiz00250]
D RBH88_04455 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_07840 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_08740 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_00945 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RBH88_08515 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RBH88_07605 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RBH88_03450 carbon-nitrogen family hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D RBH88_08250 nitrilase-related carbon-nitrogen hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D RBH88_08335 carbon-nitrogen family hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D RBH88_04500 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RBH88_02265 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RBH88_02570 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RBH88_04905 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RBH88_01600 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RBH88_01095 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RBH88_00915 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RBH88_03040 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RBH88_08715 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RBH88_02790 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBH88_08755 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RBH88_08105 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RBH88_04580 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RBH88_06470 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RBH88_04570 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:amiz00260]
D RBH88_10955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBH88_10975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBH88_07835 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBH88_07960 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBH88_09345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBH88_07440 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RBH88_09875 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RBH88_10515 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RBH88_10520 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RBH88_07445 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RBH88_09325 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RBH88_00345 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBH88_11115 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBH88_04045 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RBH88_07550 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBH88_08735 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBH88_00870 C-terminal binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBH88_11205 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBH88_02285 cobC; alpha-ribazole phosphatase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D RBH88_02630 histidine phosphatase family protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D RBH88_00340 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RBH88_01695 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RBH88_00630 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RBH88_00635 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RBH88_01690 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RBH88_01705 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01700 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RBH88_09545 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RBH88_00540 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBH88_10485 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBH88_10490 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBH88_08825 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D RBH88_07880 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RBH88_07805 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:amiz00270]
D RBH88_10395 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RBH88_09870 pyridoxal-phosphate dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RBH88_10400 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RBH88_03485 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RBH88_10245 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RBH88_10120 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RBH88_07475 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RBH88_08890 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RBH88_05600 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RBH88_05000 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RBH88_08180 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RBH88_04990 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D RBH88_04995 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RBH88_10955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBH88_10975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBH88_07835 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBH88_07960 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBH88_09345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBH88_11480 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RBH88_04455 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_07840 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_08740 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_07880 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RBH88_00540 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBH88_10485 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBH88_10490 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBH88_00870 C-terminal binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBH88_11205 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:amiz00280]
D RBH88_11480 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_09475 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RBH88_05625 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RBH88_05620 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RBH88_10835 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RBH88_03560 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:amiz00290]
D RBH88_00805 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RBH88_10380 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RBH88_10385 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RBH88_10390 isocitrate/isopropylmalate family dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RBH88_01160 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RBH88_11230 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RBH88_11480 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RBH88_10375 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:amiz00300]
D RBH88_07835 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBH88_07960 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBH88_09345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBH88_10955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBH88_10975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBH88_00075 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RBH88_10970 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RBH88_10965 dihydrodipicolinate reductase C-terminal domain-containing protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RBH88_10950 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RBH88_00250 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBH88_00605 Sapep family Mn(2+)-dependent dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBH88_01915 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBH88_02725 M20 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBH88_09015 ArgE/DapE family deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBH88_09725 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RBH88_09740 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RBH88_10960 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D RBH88_00810 3-isopropylmalate dehydratase small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
D RBH88_08235 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RBH88_08770 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RBH88_09745 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RBH88_08765 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RBH88_10510 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RBH88_06010 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RBH88_06005 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:amiz00310]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBH88_07880 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RBH88_09935 ablA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D RBH88_04230 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RBH88_04235 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00220 Arginine biosynthesis [PATH:amiz00220]
D RBH88_05715 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RBH88_09845 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RBH88_04500 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RBH88_02265 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RBH88_04130 arginine deiminase family protein K01478 arcA; arginine deiminase [EC:3.5.3.6]
D RBH88_08105 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RBH88_04580 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RBH88_02790 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBH88_08755 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RBH88_09815 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RBH88_08715 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RBH88_04455 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_07840 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_08740 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_10950 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:amiz00330]
D RBH88_10880 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RBH88_05500 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RBH88_08885 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RBH88_08890 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RBH88_07475 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RBH88_00980 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RBH88_00595 pyrroline-5-carboxylate reductase dimerization domain-containing protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RBH88_06215 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RBH88_09685 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RBH88_09680 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RBH88_04455 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_07840 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_08740 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:amiz00340]
D RBH88_06780 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RBH88_06805 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D RBH88_06795 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RBH88_06790 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RBH88_06800 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RBH88_06785 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RBH88_04950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBH88_05675 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBH88_06770 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RBH88_11080 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RBH88_11270 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RBH88_11275 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RBH88_08170 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D RBH88_11280 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D RBH88_01935 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:amiz00350]
D RBH88_04455 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_07840 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_08740 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_04950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBH88_05675 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBH88_01535 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:amiz00360]
D RBH88_07790 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RBH88_04455 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_07840 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_08740 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_04950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBH88_05675 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBH88_00980 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:amiz00380]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBH88_07375 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RBH88_00980 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:amiz00400]
D RBH88_07805 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RBH88_04455 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_07840 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_08740 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_04950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBH88_05675 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:amiz00410]
D RBH88_01095 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RBH88_00915 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RBH88_10980 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RBH88_09820 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00430 Taurine and hypotaurine metabolism [PATH:amiz00430]
D RBH88_00420 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RBH88_00880 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RBH88_04780 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:amiz00450]
D RBH88_03485 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RBH88_10245 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RBH88_06550 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RBH88_04855 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RBH88_04615 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RBH88_07215 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:amiz00460]
D RBH88_07375 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RBH88_00420 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RBH88_00880 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RBH88_08515 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RBH88_07605 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RBH88_00345 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBH88_11115 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:amiz00470]
D RBH88_02910 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RBH88_02495 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_09920 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_09925 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_07880 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RBH88_08105 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RBH88_04580 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RBH88_05995 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RBH88_09600 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D RBH88_00945 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RBH88_08825 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D RBH88_09725 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RBH88_09740 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RBH88_06495 alanine/ornithine racemase family PLP-dependent enzyme K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:amiz00480]
D RBH88_00420 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RBH88_00880 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RBH88_07930 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RBH88_01275 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RBH88_08885 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RBH88_08890 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:amiz00540]
D RBH88_02325 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RBH88_02315 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RBH88_02310 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RBH88_02340 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RBH88_02345 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RBH88_02370 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RBH88_02365 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RBH88_02385 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RBH88_02375 glycosyltransferase N-terminal domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RBH88_08465 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RBH88_09435 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RBH88_03090 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RBH88_08690 PfkB family carbohydrate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RBH88_03110 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RBH88_03095 nucleotidyltransferase family protein K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
D RBH88_02405 glycosyltransferase family 9 protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis [PATH:amiz00542]
D RBH88_05660 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:amiz00541]
D RBH88_06475 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBH88_00375 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RBH88_03100 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D RBH88_06445 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RBH88_00735 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RBH88_05665 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RBH88_06860 neuC; UDP-N-acetylglucosamine 2-epimerase K08068 siaA; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D RBH88_06855 acylneuraminate cytidylyltransferase family protein K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D RBH88_00720 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D RBH88_00715 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
C 00550 Peptidoglycan biosynthesis [PATH:amiz00550]
D RBH88_05670 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBH88_05975 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RBH88_05980 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RBH88_05995 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RBH88_06010 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RBH88_02495 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_09920 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_09925 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_06005 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RBH88_05690 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RBH88_02510 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RBH88_06000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBH88_05985 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RBH88_09995 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RBH88_07270 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RBH88_06015 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:amiz00552]
D RBH88_02510 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RBH88_05660 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RBH88_05860 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RBH88_10630 glycosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:amiz00543]
D RBH88_05660 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RBH88_10395 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:amiz00730]
D RBH88_09540 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RBH88_10030 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBH88_05815 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RBH88_09535 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RBH88_09530 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RBH88_05795 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D RBH88_07045 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:amiz00740]
D RBH88_05150 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RBH88_05140 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RBH88_03735 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D RBH88_05155 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RBH88_05145 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RBH88_05305 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RBH88_09535 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RBH88_05075 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism
D RBH88_09875 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RBH88_10515 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RBH88_10520 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RBH88_07445 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:amiz00760]
D RBH88_09290 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RBH88_05085 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RBH88_01760 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RBH88_04495 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RBH88_05855 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RBH88_06420 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RBH88_00120 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RBH88_11565 NADH pyrophosphatase zinc ribbon domain-containing protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RBH88_05725 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RBH88_03945 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RBH88_03810 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RBH88_08550 Sir2 family NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RBH88_05825 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RBH88_00825 isocitrate lyase/PEP mutase family protein K20454 dml; 2,3-dimethylmalate lyase [EC:4.1.3.32]
D RBH88_03590 isocitrate lyase/PEP mutase family protein K20454 dml; 2,3-dimethylmalate lyase [EC:4.1.3.32]
C 00770 Pantothenate and CoA biosynthesis [PATH:amiz00770]
D RBH88_01160 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RBH88_11230 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RBH88_01590 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RBH88_10445 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RBH88_10715 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RBH88_10440 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RBH88_10980 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RBH88_02995 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RBH88_04715 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RBH88_06420 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RBH88_04770 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RBH88_04480 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RBH88_06200 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RBH88_11480 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RBH88_09820 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00780 Biotin metabolism [PATH:amiz00780]
D RBH88_04830 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RBH88_03125 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_11210 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_04820 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_11305 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_02320 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RBH88_10750 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D RBH88_10745 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:amiz00785]
D RBH88_01710 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RBH88_01730 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01675 dihydrolipoamide acetyltransferase family protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RBH88_01695 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RBH88_00630 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RBH88_00635 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RBH88_01690 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RBH88_01705 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RBH88_01700 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:amiz00790]
D RBH88_02800 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D RBH88_02620 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RBH88_02625 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RBH88_05595 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RBH88_05150 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RBH88_02795 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RBH88_08385 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D RBH88_05940 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RBH88_05935 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RBH88_05930 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RBH88_05945 substrate-binding domain-containing protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RBH88_05950 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:amiz00670]
D RBH88_01900 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RBH88_01945 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RBH88_01905 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RBH88_11085 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RBH88_01940 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RBH88_00345 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBH88_11115 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBH88_04560 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RBH88_04555 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RBH88_08170 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D RBH88_11280 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D RBH88_01935 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D RBH88_05045 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RBH88_01705 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RBH88_06570 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:amiz00860]
D RBH88_03905 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBH88_05245 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBH88_08700 hypothetical protein K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RBH88_08310 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RBH88_04920 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RBH88_00380 ribonuclease HI family protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:amiz00130]
D RBH88_08115 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:amiz00900]
D RBH88_05815 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RBH88_05700 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RBH88_05240 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D RBH88_04630 hypothetical protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RBH88_05710 ispG; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RBH88_05030 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBH88_05810 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RBH88_05690 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
D RBH88_03560 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RBH88_02535 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBH88_02540 transketolase C-terminal domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBH88_02920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D RBH88_00375 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:amiz01054]
D RBH88_00945 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RBH88_09610 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:amiz00332]
D RBH88_09685 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RBH88_09680 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:amiz00261]
D RBH88_10955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBH88_10975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBH88_00075 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RBH88_10970 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RBH88_10965 dihydrodipicolinate reductase C-terminal domain-containing protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:amiz00521]
D RBH88_08875 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RBH88_08435 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RBH88_10770 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RBH88_00375 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RBH88_08875 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:amiz00401]
D RBH88_04455 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_07840 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_08740 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_04950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBH88_05675 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RBH88_10535 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
C 00333 Prodigiosin biosynthesis
D RBH88_04815 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RBH88_03125 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_11210 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_04820 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_11305 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:amiz00998]
D RBH88_04825 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RBH88_00230 ornithine cyclodeaminase K21721 sbnB; N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase [EC:1.5.1.51]
C 00999 Biosynthesis of various plant secondary metabolites
D RBH88_10120 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites [PATH:amiz00997]
D RBH88_00230 ornithine cyclodeaminase K21721 sbnB; N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase [EC:1.5.1.51]
D RBH88_06495 alanine/ornithine racemase family PLP-dependent enzyme K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:amiz00362]
D RBH88_04060 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RBH88_10260 purB; adenylosuccinate lyase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D RBH88_01880 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_05650 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_09455 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_05645 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RBH88_09460 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:amiz00627]
D RBH88_00980 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RBH88_07375 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RBH88_02330 HAD-IIIA family hydrolase K25935 ppcD; phenyl-phosphate phosphatase/carboxylase subunit delta [EC:4.1.1.123]
D RBH88_04230 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RBH88_04235 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:amiz00625]
D RBH88_01535 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D RBH88_04060 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
D RBH88_08210 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RBH88_08205 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RBH88_08220 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RBH88_08215 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:amiz00643]
D RBH88_00980 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RBH88_07375 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D RBH88_04060 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:amiz00626]
D RBH88_01535 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:amiz03020]
D RBH88_07190 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RBH88_07185 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RBH88_07005 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RBH88_02595 hydrogenase expression protein HypA/HybF K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:amiz03010]
D RBH88_05035 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D RBH88_04425 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RBH88_07120 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RBH88_07010 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RBH88_07065 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RBH88_02750 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RBH88_07170 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RBH88_07080 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RBH88_09280 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RBH88_07155 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RBH88_07015 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RBH88_07175 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RBH88_07020 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RBH88_07085 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RBH88_06685 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RBH88_07585 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RBH88_07105 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RBH88_02760 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RBH88_07130 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RBH88_06740 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RBH88_02680 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RBH88_09195 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RBH88_07135 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RBH88_07150 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RBH88_07145 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RBH88_07090 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RBH88_07075 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RBH88_09185 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RBH88_02770 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RBH88_09190 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RBH88_09200 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RBH88_09285 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RBH88_07100 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RBH88_07055 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RBH88_07115 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RBH88_07000 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RBH88_07070 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RBH88_07565 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RBH88_06655 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RBH88_05835 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RBH88_07125 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RBH88_07140 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RBH88_07095 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RBH88_06435 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RBH88_05845 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RBH88_05800 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RBH88_07110 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RBH88_07060 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RBH88_06575 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RBH88_04790 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RBH88_09220 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RBH88_06730 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RBH88_06660 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RBH88_07025 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RBH88_07180 ribosomal L7Ae/L30e/S12e/Gadd45 family protein K07590 RP-L7A; large subunit ribosomal protein L7A
C 00970 Aminoacyl-tRNA biosynthesis [PATH:amiz00970]
D RBH88_02270 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RBH88_03905 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBH88_05245 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBH88_03020 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RBH88_03025 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RBH88_03015 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RBH88_06590 alanine--tRNA ligase-related protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBH88_05005 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBH88_07650 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBH88_08705 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RBH88_06375 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RBH88_06370 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RBH88_06670 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RBH88_05160 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RBH88_04615 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RBH88_05130 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RBH88_07215 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RBH88_05045 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RBH88_05590 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RBH88_06750 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBH88_05340 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RBH88_03005 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RBH88_02740 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBH88_10475 YbaK/EbsC family protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBH88_09405 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBH88_06775 ATP phosphoribosyltransferase regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBH88_07655 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBH88_06640 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RBH88_06635 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RBH88_08475 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBH88_04655 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:amiz03060]
D RBH88_07050 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBH88_09210 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBH88_09295 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBH88_07330 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RBH88_07325 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RBH88_07335 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RBH88_06715 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RBH88_02730 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBH88_07590 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RBH88_04890 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RBH88_04070 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RBH88_01985 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RBH88_01950 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:amiz04122]
D RBH88_10030 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBH88_10095 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RBH88_04930 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RBH88_05940 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RBH88_10040 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D RBH88_05935 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RBH88_05930 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:amiz03018]
D RBH88_07345 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RBH88_06680 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RBH88_08845 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RBH88_02455 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RBH88_02840 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RBH88_02505 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RBH88_02430 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBH88_02665 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D RBH88_00240 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBH88_02645 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBH88_07395 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:amiz03030]
D RBH88_06515 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBH88_06520 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RBH88_11020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBH88_02775 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RBH88_07355 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RBH88_02755 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBH88_00380 ribonuclease HI family protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D RBH88_01995 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RBH88_03915 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBH88_03010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:amiz03410]
D RBH88_04940 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RBH88_08950 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RBH88_10015 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RBH88_01750 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RBH88_05685 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RBH88_01575 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RBH88_06500 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RBH88_03915 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBH88_07310 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RBH88_03010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:amiz03420]
D RBH88_06425 helicase-related protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RBH88_06225 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RBH88_06230 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RBH88_05135 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RBH88_04475 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBH88_03915 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBH88_03010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:amiz03430]
D RBH88_05015 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RBH88_06615 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D RBH88_05020 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RBH88_04475 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBH88_04985 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RBH88_05805 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RBH88_07310 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RBH88_02755 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBH88_06515 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBH88_11020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBH88_06520 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RBH88_03010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:amiz03440]
D RBH88_07310 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RBH88_02755 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBH88_11015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RBH88_06380 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RBH88_05230 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D RBH88_08575 recA; recombinase RecA K03553 recA; recombination protein RecA
D RBH88_03915 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBH88_05740 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RBH88_05745 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RBH88_05735 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RBH88_02830 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RBH88_06515 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBH88_11020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBH88_06520 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RBH88_04720 prephenate dehydrogenase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:amiz02010]
D RBH88_01815 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D RBH88_01820 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D RBH88_01825 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RBH88_07775 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RBH88_11140 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RBH88_07780 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RBH88_11135 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RBH88_11130 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RBH88_09520 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D RBH88_09515 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D RBH88_09510 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D RBH88_07705 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RBH88_07700 ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D RBH88_07695 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RBH88_01715 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RBH88_05480 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RBH88_11195 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RBH88_05485 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RBH88_01720 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RBH88_11190 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RBH88_11185 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RBH88_01330 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RBH88_07455 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RBH88_10785 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RBH88_10795 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D RBH88_10790 betaine/proline/choline family ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RBH88_09115 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RBH88_01765 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RBH88_09635 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RBH88_09840 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D RBH88_09830 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RBH88_01775 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RBH88_09645 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RBH88_09825 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RBH88_01770 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RBH88_09650 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RBH88_09835 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RBH88_01780 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RBH88_09640 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RBH88_01035 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RBH88_10720 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RBH88_01030 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RBH88_10725 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RBH88_01025 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RBH88_10730 ABC transporter permease subunit K02038 pstA; phosphate transport system permease protein
D RBH88_01020 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RBH88_10735 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RBH88_01480 ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RBH88_10530 ABC transporter substrate-binding protein/permease K02424 tcyA; L-cystine transport system substrate-binding protein
D RBH88_00490 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RBH88_10230 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RBH88_00495 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RBH88_10225 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RBH88_00500 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RBH88_04505 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RBH88_09750 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RBH88_02945 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RBH88_08050 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RBH88_08455 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RBH88_09030 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RBH88_00955 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_11245 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_02695 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_10070 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_00970 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_11265 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_02700 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_10065 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_00975 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_11260 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_02705 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_10060 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_00960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_11255 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_02710 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_10055 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_00965 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_11250 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_02715 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_10050 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_01080 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RBH88_01085 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RBH88_01090 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RBH88_01250 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RBH88_01265 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D RBH88_01300 ABC transporter permease K12369 dppB; dipeptide transport system permease protein
D RBH88_00390 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D RBH88_01225 glutathione ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D RBH88_11385 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D RBH88_11395 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RBH88_11390 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RBH88_10545 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D RBH88_10555 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RBH88_10560 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RBH88_05870 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D RBH88_10540 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D RBH88_10550 carboxypeptidase-like regulatory domain-containing protein K16915 cbiL; nickel transport protein
D RBH88_11465 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RBH88_06985 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D RBH88_06995 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RBH88_06990 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RBH88_02335 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D RBH88_07425 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RBH88_02550 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RBH88_02545 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D RBH88_02355 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS)
D RBH88_06545 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:amiz03070]
D RBH88_07995 TolC family protein K12340 tolC; outer membrane protein
D RBH88_09265 TolC family protein K12340 tolC; outer membrane protein
D RBH88_06310 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D RBH88_06315 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RBH88_07330 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RBH88_07325 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RBH88_09210 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBH88_09295 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBH88_07050 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBH88_07335 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RBH88_06715 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RBH88_02730 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBH88_04890 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RBH88_07590 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:amiz02020]
D RBH88_01005 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RBH88_01010 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RBH88_01035 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RBH88_10720 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RBH88_06700 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RBH88_09070 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D RBH88_02230 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RBH88_02130 motility protein A K02556 motA; chemotaxis protein MotA
D RBH88_10280 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RBH88_11215 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RBH88_08090 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RBH88_10285 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RBH88_11220 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RBH88_08095 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RBH88_10290 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RBH88_11225 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RBH88_11025 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RBH88_08230 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D RBH88_09660 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RBH88_00195 HTH domain-containing protein K11692 K11692; two-component system, CitB family, response regulator DctR
D RBH88_09970 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D RBH88_09975 transporter substrate-binding domain-containing protein K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D RBH88_11320 response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D RBH88_00310 malic enzyme-like NAD(P)-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RBH88_03135 malic enzyme-like NAD(P)-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RBH88_10275 malic enzyme-like NAD(P)-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RBH88_06890 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D RBH88_01455 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RBH88_04245 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RBH88_04250 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D RBH88_04255 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D RBH88_04275 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D RBH88_04280 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D RBH88_04285 response regulator K02282 cpaE; pilus assembly protein CpaE
D RBH88_04290 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBH88_04295 type II secretion system F family protein K12510 tadB; tight adherence protein B
D RBH88_04300 type II secretion system F family protein K12511 tadC; tight adherence protein C
D RBH88_02790 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBH88_04230 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RBH88_04235 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBH88_06040 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RBH88_00200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_01565 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_04020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_06105 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_09500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_11330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_09335 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBH88_10105 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBH88_02210 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RBH88_02155 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBH88_02205 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RBH88_03470 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RBH88_03585 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RBH88_01670 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RBH88_01925 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RBH88_08105 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RBH88_07995 TolC family protein K12340 tolC; outer membrane protein
D RBH88_09265 TolC family protein K12340 tolC; outer membrane protein
D RBH88_00735 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RBH88_05665 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RBH88_06915 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D RBH88_08885 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:amiz02024]
D RBH88_10535 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D RBH88_09070 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D RBH88_00365 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RBH88_00350 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RBH88_00370 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RBH88_00360 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RBH88_01725 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RBH88_05490 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RBH88_00955 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_11245 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_02695 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_10070 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_00970 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_11265 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_02700 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_10065 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_00975 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_11260 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_02705 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_10060 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_00960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_11255 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_02710 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_10055 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_00965 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_11250 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_02715 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_10050 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_00305 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_01545 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_08695 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_05140 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RBH88_01250 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RBH88_00455 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RBH88_04360 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RBH88_08135 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RBH88_01240 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBH88_04365 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBH88_08140 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBH88_00405 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBH88_00425 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBH88_00400 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_01245 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_01295 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_04370 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_08145 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_00430 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_00395 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBH88_00435 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBH88_01290 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBH88_04375 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBH88_08150 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBH88_01255 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RBH88_01285 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RBH88_04380 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RBH88_08155 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RBH88_00440 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RBH88_06715 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RBH88_09210 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBH88_09295 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBH88_07050 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBH88_07335 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RBH88_02730 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBH88_04890 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RBH88_07590 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RBH88_04250 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:amiz02030]
D RBH88_00200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_01565 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_04020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_06105 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_09500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_11330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_01265 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D RBH88_02210 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RBH88_09335 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBH88_10105 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBH88_02155 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBH88_02215 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D RBH88_09425 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D RBH88_02205 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RBH88_02220 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RBH88_06040 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RBH88_02080 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RBH88_02145 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RBH88_02150 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D RBH88_02130 motility protein A K02556 motA; chemotaxis protein MotA
D RBH88_02135 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:amiz02040]
D RBH88_02070 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RBH88_02075 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RBH88_02080 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RBH88_02090 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RBH88_02140 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D RBH88_02145 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RBH88_02150 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D RBH88_02165 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RBH88_02170 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RBH88_02175 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RBH88_02185 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RBH88_02180 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RBH88_06960 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RBH88_02060 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RBH88_02065 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RBH88_02115 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RBH88_06970 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RBH88_06965 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RBH88_06955 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RBH88_06950 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RBH88_06945 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RBH88_06900 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RBH88_06535 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D RBH88_02130 motility protein A K02556 motA; chemotaxis protein MotA
D RBH88_02135 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RBH88_06915 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RBH88_01480 ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RBH88_10530 ABC transporter substrate-binding protein/permease K02424 tcyA; L-cystine transport system substrate-binding protein
D RBH88_01415 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RBH88_02230 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RBH88_07345 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:amiz04980]
D RBH88_08310 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RBH88_05630 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:amiz01501]
D RBH88_01250 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RBH88_09610 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RBH88_04195 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RBH88_07995 TolC family protein K12340 tolC; outer membrane protein
D RBH88_09265 TolC family protein K12340 tolC; outer membrane protein
D RBH88_07270 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RBH88_06015 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:amiz01502]
D RBH88_09660 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RBH88_02495 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_09920 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_09925 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_02910 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RBH88_06005 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RBH88_06000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBH88_05985 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:amiz01503]
D RBH88_03750 copper resistance protein NlpE N-terminal domain-containing protein K06079 cutF; copper homeostasis protein (lipoprotein)
D RBH88_09315 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBH88_06700 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RBH88_04195 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RBH88_07995 TolC family protein K12340 tolC; outer membrane protein
D RBH88_09265 TolC family protein K12340 tolC; outer membrane protein
D RBH88_02325 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RBH88_08230 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:amiz01000]
C 01001 Protein kinases [BR:amiz01001]
D RBH88_06825 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RBH88_01005 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RBH88_09075 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RBH88_01455 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RBH88_04245 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RBH88_09975 transporter substrate-binding domain-containing protein K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D RBH88_02210 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:amiz01009]
D RBH88_04995 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RBH88_02430 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:amiz01002]
D RBH88_09490 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RBH88_04260 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RBH88_07420 hydrogenase 3 maturation endopeptidase HyCI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D RBH88_07390 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RBH88_04395 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D RBH88_04570 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RBH88_06470 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RBH88_09590 type 1 glutamine amidotransferase domain-containing protein K05520 yhbO; deglycase [EC:3.5.1.124]
D RBH88_09890 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RBH88_09660 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RBH88_01275 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RBH88_08005 M20 family metallopeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D RBH88_00250 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBH88_00605 Sapep family Mn(2+)-dependent dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBH88_01915 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBH88_02725 M20 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBH88_09015 ArgE/DapE family deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RBH88_04390 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D RBH88_11090 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D RBH88_04400 amidohydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A
D RBH88_04030 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D RBH88_11175 M20 family metallo-hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RBH88_05120 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RBH88_02935 Xaa-Pro peptidase family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RBH88_10865 iadA; beta-aspartyl-peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D RBH88_06235 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RBH88_08760 M48 family metallopeptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D RBH88_05705 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RBH88_01230 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D RBH88_01260 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D RBH88_06700 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RBH88_05570 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RBH88_05580 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RBH88_01985 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RBH88_01950 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RBH88_02560 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RBH88_02045 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RBH88_00420 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RBH88_00880 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RBH88_09320 TldD/PmbA family protein K03592 pmbA; PmbA protein
D RBH88_05785 TldD/PmbA family protein K03568 tldD; TldD protein
D RBH88_09990 MG2 domain-containing protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:amiz01003]
D RBH88_10630 glycosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RBH88_09710 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D RBH88_09995 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RBH88_05660 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RBH88_11570 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D RBH88_00125 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D RBH88_09570 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:amiz01005]
D RBH88_02325 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RBH88_02345 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RBH88_02315 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RBH88_02310 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RBH88_02340 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RBH88_08465 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RBH88_09435 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RBH88_02375 glycosyltransferase N-terminal domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RBH88_02365 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RBH88_02385 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RBH88_02370 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RBH88_08690 PfkB family carbohydrate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RBH88_02405 glycosyltransferase family 9 protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RBH88_03090 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RBH88_03110 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RBH88_05660 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:amiz01011]
D RBH88_05670 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBH88_05975 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RBH88_05980 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RBH88_05995 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RBH88_06010 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RBH88_02495 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_09920 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_09925 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBH88_02910 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RBH88_06000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBH88_05985 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RBH88_02510 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RBH88_07415 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RBH88_09995 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RBH88_07270 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RBH88_06015 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RBH88_09660 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RBH88_08750 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RBH88_05775 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RBH88_05755 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D RBH88_09315 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:amiz01004]
D RBH88_04815 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RBH88_04805 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RBH88_04830 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RBH88_03125 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_11210 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_04820 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_11305 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBH88_02320 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RBH88_04810 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RBH88_07530 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RBH88_00305 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_01545 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_08695 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_04800 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RBH88_07525 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RBH88_04685 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:amiz01008]
D RBH88_00945 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:amiz01006]
D RBH88_05810 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RBH88_05690 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RBH88_05025 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:amiz01007]
D RBH88_03905 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBH88_05245 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBH88_08475 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBH88_04655 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RBH88_05130 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RBH88_02740 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBH88_07215 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RBH88_05340 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RBH88_05590 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RBH88_06750 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBH88_03005 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RBH88_07650 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBH88_08705 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RBH88_06775 ATP phosphoribosyltransferase regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBH88_07655 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBH88_06375 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RBH88_06370 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RBH88_05160 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RBH88_10475 YbaK/EbsC family protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBH88_09405 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBH88_06670 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RBH88_06590 alanine--tRNA ligase-related protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBH88_05005 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBH88_06640 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RBH88_06635 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RBH88_04455 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_07840 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_08740 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RBH88_00840 pyridoxal phosphate-dependent aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D RBH88_04950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBH88_05675 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBH88_00340 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RBH88_03485 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RBH88_10245 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RBH88_10950 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RBH88_01095 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RBH88_00915 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RBH88_08225 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00596 E4.1.1.64; 2,2-dialkylglycine decarboxylase (pyruvate) [EC:4.1.1.64]
D RBH88_11480 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:amiz03000]
D RBH88_07975 GyrI-like domain-containing protein K13652 K13652; AraC family transcriptional regulator
D RBH88_09885 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RBH88_08405 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RBH88_00515 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RBH88_00520 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RBH88_00875 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RBH88_08080 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RBH88_10685 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RBH88_08415 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RBH88_01105 GntR family transcriptional regulator K07978 plmA; GntR family transcriptional regulator
D RBH88_10915 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RBH88_00935 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D RBH88_01585 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D RBH88_10450 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D RBH88_11285 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D RBH88_11510 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D RBH88_10035 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D RBH88_03965 DtxR family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RBH88_10745 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RBH88_00775 NrpR regulatory domain-containing protein K09720 nrpRI; HTH-type transcriptional regulator, global nitrogen regulator NrpRI
D RBH88_04635 phosphoribosyltransferase family protein K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D RBH88_08810 sugar diacid recognition domain-containing protein K02647 cdaR; carbohydrate diacid regulator
D RBH88_07340 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D RBH88_02055 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D RBH88_05720 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D RBH88_04420 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RBH88_00885 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D RBH88_01910 helix-turn-helix domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D RBH88_09000 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D RBH88_11420 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D RBH88_02780 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBH88_11450 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBH88_02635 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RBH88_07520 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D RBH88_01595 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBH88_04840 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBH88_02690 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RBH88_06030 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:amiz03021]
D RBH88_07005 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RBH88_07190 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RBH88_07185 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RBH88_01415 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RBH88_00665 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
D RBH88_02230 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RBH88_05265 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RBH88_04980 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RBH88_09205 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RBH88_06825 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RBH88_02500 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RBH88_02455 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RBH88_02595 hydrogenase expression protein HypA/HybF K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03019 Messenger RNA biogenesis [BR:amiz03019]
D RBH88_08745 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RBH88_07235 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D RBH88_04835 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RBH88_02505 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RBH88_02840 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RBH88_08730 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D RBH88_08845 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RBH88_07345 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RBH88_06680 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RBH88_02455 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RBH88_02430 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBH88_02665 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D RBH88_00240 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBH88_02645 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBH88_07395 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBH88_06890 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D RBH88_05925 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:amiz03011]
D RBH88_05035 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D RBH88_04425 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RBH88_07120 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RBH88_07010 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RBH88_07065 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RBH88_02750 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RBH88_07170 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RBH88_07080 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RBH88_09280 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RBH88_07155 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RBH88_07015 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RBH88_07175 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RBH88_07020 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RBH88_07085 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RBH88_06685 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RBH88_07585 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RBH88_07105 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RBH88_02760 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RBH88_07130 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RBH88_06740 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RBH88_02680 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RBH88_09195 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RBH88_07135 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RBH88_07150 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RBH88_07145 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RBH88_07090 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RBH88_07075 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RBH88_02770 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RBH88_09190 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RBH88_09200 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RBH88_09185 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RBH88_09285 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RBH88_07100 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RBH88_07055 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RBH88_07115 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RBH88_07000 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RBH88_07070 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RBH88_07565 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RBH88_06655 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RBH88_05835 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RBH88_07125 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RBH88_07140 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RBH88_07095 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RBH88_05845 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RBH88_05800 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RBH88_07110 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RBH88_07060 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RBH88_06575 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RBH88_04790 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RBH88_09220 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RBH88_06730 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RBH88_06660 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RBH88_07025 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RBH88_06435 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RBH88_07180 ribosomal L7Ae/L30e/S12e/Gadd45 family protein K07590 RP-L7A; large subunit ribosomal protein L7A
C 03009 Ribosome biogenesis [BR:amiz03009]
D RBH88_04835 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RBH88_08745 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RBH88_06385 era; GTPase Era K03595 era; GTPase
D RBH88_05850 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D RBH88_05265 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RBH88_04980 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RBH88_09205 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RBH88_04735 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RBH88_08615 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RBH88_11440 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RBH88_06025 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RBH88_07220 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RBH88_05820 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RBH88_06220 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RBH88_05220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RBH88_10370 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RBH88_09795 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RBH88_06145 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RBH88_07690 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RBH88_04670 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RBH88_08725 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RBH88_05345 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RBH88_02575 N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RBH88_07575 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D RBH88_08595 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RBH88_02655 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RBH88_07235 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D RBH88_05010 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RBH88_08845 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RBH88_04725 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D RBH88_01990 GTPase K14540 rbgA; ribosome biogenesis GTPase A
D RBH88_04690 hflX; GTPase HflX K03665 hflX; GTPase
D RBH88_07200 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RBH88_07305 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RBH88_05290 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D RBH88_05260 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D RBH88_05865 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D RBH88_06400 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RBH88_04460 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D RBH88_08375 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D RBH88_04785 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:amiz03016]
D RBH88_01205 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RBH88_04485 CBS domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RBH88_01895 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D RBH88_01890 archease K24956 ZBTB8OS; protein archease
D RBH88_03905 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBH88_05245 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBH88_10475 YbaK/EbsC family protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBH88_09405 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBH88_05340 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RBH88_06750 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBH88_07215 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RBH88_02740 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBH88_03005 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RBH88_07650 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBH88_06590 alanine--tRNA ligase-related protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBH88_05005 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBH88_08705 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RBH88_06670 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RBH88_05160 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RBH88_05130 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RBH88_05590 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RBH88_06775 ATP phosphoribosyltransferase regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBH88_07655 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBH88_06640 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RBH88_06635 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RBH88_08475 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBH88_04655 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RBH88_07300 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RBH88_02675 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RBH88_04755 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RBH88_10305 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D RBH88_06980 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RBH88_05300 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RBH88_10030 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBH88_07200 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RBH88_05025 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RBH88_08775 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RBH88_11010 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RBH88_04855 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RBH88_06725 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RBH88_09305 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RBH88_08580 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RBH88_06375 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RBH88_06370 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RBH88_04090 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RBH88_03000 tRNA-dihydrouridine synthase family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RBH88_02980 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RBH88_02660 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RBH88_02035 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RBH88_07570 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RBH88_04930 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RBH88_03075 ATP-binding protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RBH88_10095 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RBH88_05760 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RBH88_02795 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RBH88_02925 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D RBH88_07205 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RBH88_06180 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RBH88_07405 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RBH88_06185 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RBH88_04775 nucleotidyltransferase family protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D RBH88_06680 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:amiz03012]
D RBH88_05105 translation initiation factor K03113 EIF1; translation initiation factor 1
D RBH88_05280 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RBH88_06665 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RBH88_08860 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RBH88_04430 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RBH88_07160 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RBH88_09225 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RBH88_03030 fusA; elongation factor G K02355 fusA; elongation factor G
D RBH88_07165 fusA; elongation factor G K02355 fusA; elongation factor G
D RBH88_04620 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D RBH88_06560 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RBH88_04440 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D RBH88_06555 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RBH88_06430 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RBH88_07030 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RBH88_04960 efp; elongation factor P K02356 efp; elongation factor P
D RBH88_04860 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:amiz03110]
D RBH88_09985 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RBH88_07515 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RBH88_05575 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RBH88_02050 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RBH88_02665 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D RBH88_00240 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBH88_02645 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBH88_07395 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBH88_02650 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RBH88_10000 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein
D RBH88_02640 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RBH88_09900 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D RBH88_07400 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D RBH88_06700 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RBH88_06235 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RBH88_04465 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RBH88_04470 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RBH88_07505 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RBH88_10470 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RBH88_01500 thioredoxin fold domain-containing protein K03671 TXN; thioredoxin
D RBH88_02875 thioredoxin domain-containing protein K03671 TXN; thioredoxin
D RBH88_03050 glutaredoxin domain-containing protein K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:amiz04131]
D RBH88_08745 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RBH88_04070 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RBH88_05910 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBH88_06510 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBH88_08510 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:amiz03032]
D RBH88_04730 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RBH88_11025 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RBH88_02775 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RBH88_03495 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D RBH88_07355 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RBH88_02755 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBH88_06515 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBH88_11020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBH88_06520 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RBH88_00380 ribonuclease HI family protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D RBH88_01995 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RBH88_03915 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBH88_03010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RBH88_09555 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RBH88_01305 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RBH88_02030 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:amiz03036]
D RBH88_04835 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RBH88_04730 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RBH88_10000 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein
D RBH88_11025 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RBH88_07230 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D RBH88_04660 hypothetical protein K05896 scpA; segregation and condensation protein A
D RBH88_04665 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D RBH88_05965 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RBH88_02545 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D RBH88_06015 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RBH88_05790 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RBH88_05990 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D RBH88_02550 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RBH88_05960 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RBH88_09315 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBH88_07265 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RBH88_07260 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RBH88_07255 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RBH88_02825 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D RBH88_02820 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D RBH88_06975 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBH88_07285 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBH88_07280 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RBH88_07250 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D RBH88_11445 AAA family ATPase K03496 parA; chromosome partitioning protein
D RBH88_02780 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBH88_11450 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBH88_11010 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RBH88_11440 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RBH88_02035 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RBH88_02040 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RBH88_05080 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D RBH88_05585 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
D RBH88_05915 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:amiz03400]
D RBH88_08120 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RBH88_11470 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RBH88_08950 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RBH88_04940 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RBH88_05100 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RBH88_06675 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RBH88_01750 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RBH88_05685 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RBH88_10015 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RBH88_01575 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RBH88_06500 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RBH88_09180 nfi; deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D RBH88_07310 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RBH88_03010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RBH88_03915 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBH88_06225 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RBH88_06230 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RBH88_05135 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RBH88_04475 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBH88_07190 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RBH88_07185 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RBH88_07005 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RBH88_06425 helicase-related protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RBH88_05015 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RBH88_06615 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D RBH88_05020 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RBH88_04985 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RBH88_05805 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RBH88_06515 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBH88_11020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBH88_06520 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RBH88_02755 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBH88_08575 recA; recombinase RecA K03553 recA; recombination protein RecA
D RBH88_05740 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RBH88_05745 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RBH88_05735 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RBH88_04720 prephenate dehydrogenase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RBH88_03410 exonuclease SbcCD subunit D C-terminal domain-containing protein K03547 sbcD; DNA repair protein SbcD/Mre11
D RBH88_06765 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RBH88_11015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RBH88_02830 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RBH88_06380 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RBH88_05230 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D RBH88_05830 AAA family ATPase K03631 recN; DNA repair protein RecN (Recombination protein N)
D RBH88_01320 UvrD-helicase domain-containing protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RBH88_10185 cas1b; type I-B CRISPR-associated endonuclease Cas1b K15342 cas1; CRISP-associated protein Cas1
D RBH88_09555 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RBH88_01305 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RBH88_02030 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RBH88_04730 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RBH88_02835 regulatory protein RecX K03565 recX; regulatory protein
D RBH88_06735 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RBH88_10240 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RBH88_05295 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:amiz03029]
D RBH88_05280 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RBH88_06665 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RBH88_04430 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RBH88_07160 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RBH88_09225 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RBH88_03030 fusA; elongation factor G K02355 fusA; elongation factor G
D RBH88_07165 fusA; elongation factor G K02355 fusA; elongation factor G
D RBH88_06385 era; GTPase Era K03595 era; GTPase
D RBH88_08475 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBH88_06750 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBH88_07650 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBH88_02740 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBH88_03020 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RBH88_03025 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RBH88_03015 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RBH88_02755 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBH88_02300 BamA/TamA family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D RBH88_02665 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D RBH88_00240 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBH88_02645 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBH88_02640 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RBH88_07395 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBH88_07400 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D RBH88_02650 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RBH88_10030 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBH88_06715 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:amiz02000]
D RBH88_02355 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RBH88_07705 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RBH88_07700 ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D RBH88_07695 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RBH88_01815 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D RBH88_01820 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D RBH88_01825 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RBH88_07775 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RBH88_11140 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RBH88_07780 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RBH88_11135 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RBH88_11130 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RBH88_01715 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RBH88_05480 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RBH88_11195 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RBH88_05485 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RBH88_01720 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RBH88_11190 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RBH88_11185 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RBH88_00365 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RBH88_00350 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RBH88_00370 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RBH88_00360 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RBH88_01725 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RBH88_05490 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RBH88_01330 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RBH88_07455 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RBH88_10785 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RBH88_10795 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D RBH88_10790 betaine/proline/choline family ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RBH88_09520 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D RBH88_09515 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D RBH88_09510 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D RBH88_09115 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RBH88_01765 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RBH88_09635 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RBH88_09840 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D RBH88_09830 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RBH88_01775 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RBH88_09645 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RBH88_09825 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RBH88_01770 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RBH88_09650 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RBH88_09835 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RBH88_01780 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RBH88_09640 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RBH88_09130 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBH88_09125 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBH88_09120 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBH88_08790 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D RBH88_08795 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D RBH88_08800 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RBH88_01035 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RBH88_10720 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RBH88_01030 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RBH88_10725 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RBH88_01025 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RBH88_10730 ABC transporter permease subunit K02038 pstA; phosphate transport system permease protein
D RBH88_01020 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RBH88_10735 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RBH88_01480 ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RBH88_10530 ABC transporter substrate-binding protein/permease K02424 tcyA; L-cystine transport system substrate-binding protein
D RBH88_04505 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RBH88_09750 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RBH88_02945 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RBH88_08050 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RBH88_08455 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RBH88_09030 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RBH88_00955 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_11245 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_02695 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_10070 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RBH88_00970 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_11265 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_02700 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_10065 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RBH88_00975 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_11260 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_02705 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_10060 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RBH88_00960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_11255 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_02710 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_10055 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RBH88_00965 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_11250 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_02715 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_10050 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RBH88_01080 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RBH88_01085 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RBH88_01090 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RBH88_00490 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RBH88_10230 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RBH88_00495 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RBH88_10225 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RBH88_00500 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RBH88_09025 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RBH88_10690 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RBH88_09035 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RBH88_10695 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RBH88_10705 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RBH88_08450 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RBH88_10525 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RBH88_10700 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RBH88_01250 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RBH88_01265 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D RBH88_01300 ABC transporter permease K12369 dppB; dipeptide transport system permease protein
D RBH88_00390 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D RBH88_01225 glutathione ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D RBH88_00455 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RBH88_04360 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RBH88_08135 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RBH88_01240 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBH88_04365 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBH88_08140 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBH88_00405 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBH88_00425 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RBH88_00400 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_01245 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_01295 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_04370 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_08145 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_00430 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RBH88_00395 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBH88_00435 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBH88_01290 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBH88_04375 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBH88_08150 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RBH88_01255 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RBH88_01285 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RBH88_04380 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RBH88_08155 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RBH88_00440 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RBH88_10625 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RBH88_10620 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RBH88_10615 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RBH88_08925 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D RBH88_08920 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D RBH88_08915 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D RBH88_11385 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D RBH88_11395 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RBH88_11390 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RBH88_10555 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RBH88_10545 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D RBH88_10560 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RBH88_05870 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D RBH88_10540 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D RBH88_10550 carboxypeptidase-like regulatory domain-containing protein K16915 cbiL; nickel transport protein
D RBH88_11465 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RBH88_06985 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D RBH88_06995 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RBH88_06990 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RBH88_02335 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D RBH88_07425 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RBH88_02550 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RBH88_02545 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D RBH88_03645 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RBH88_07980 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RBH88_03635 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RBH88_07985 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RBH88_03060 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RBH88_10740 cation:proton antiporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D RBH88_00150 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBH88_03710 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBH88_07380 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBH88_11590 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBH88_01375 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBH88_01805 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBH88_03480 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D RBH88_09945 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D RBH88_08510 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D RBH88_01570 potassium channel protein K10716 kch; voltage-gated potassium channel
D RBH88_03620 potassium channel family protein K10716 kch; voltage-gated potassium channel
D RBH88_08350 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D RBH88_00415 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D RBH88_08255 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D RBH88_07495 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D RBH88_04355 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D RBH88_09275 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D RBH88_02130 motility protein A K02556 motA; chemotaxis protein MotA
D RBH88_02135 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RBH88_08900 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D RBH88_08905 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR
D RBH88_03800 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D RBH88_03745 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBH88_06395 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBH88_06095 S8 family serine peptidase K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D RBH88_08930 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D RBH88_07995 TolC family protein K12340 tolC; outer membrane protein
D RBH88_09265 TolC family protein K12340 tolC; outer membrane protein
D RBH88_02300 BamA/TamA family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D RBH88_03695 CidA/LrgA family protein K06518 cidA; holin-like protein
D RBH88_09785 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D RBH88_04195 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RBH88_00590 DMT family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D RBH88_01560 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D RBH88_11240 DMT family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D RBH88_08975 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D RBH88_04115 L-lactate permease K03303 lutP; lactate permease
D RBH88_07730 BCCT family transporter K05020 opuD; glycine betaine transporter
D RBH88_08675 BCCT family transporter K05020 opuD; glycine betaine transporter
D RBH88_00895 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D RBH88_10875 sodium:solute symporter family protein K14392 panF; sodium/pantothenate symporter
D RBH88_10455 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D RBH88_04015 hypothetical protein K11928 putP; sodium/proline symporter
D RBH88_08175 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D RBH88_03755 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D RBH88_06650 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D RBH88_03760 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D RBH88_03765 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RBH88_06645 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D RBH88_04445 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RBH88_10605 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RBH88_09420 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D RBH88_03790 chromate transporter K07240 chrA; chromate transporter
D RBH88_03795 chromate transporter K07240 chrA; chromate transporter
D RBH88_03690 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D RBH88_03470 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RBH88_03585 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RBH88_01670 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RBH88_01925 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RBH88_08340 citrate transporter K21393 yiaN; TRAP-type transport system large permease protein
D RBH88_09665 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein
D RBH88_01055 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein
D RBH88_00530 TRAP transporter small permease subunit K21394 yiaM; TRAP-type transport system small permease protein
D RBH88_00930 TRAP transporter small permease subunit K21394 yiaM; TRAP-type transport system small permease protein
D RBH88_03465 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein
D RBH88_10680 TRAP transporter small permease subunit K21394 yiaM; TRAP-type transport system small permease protein
D RBH88_00545 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein
D RBH88_01165 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D RBH88_03475 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D RBH88_09675 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein
D RBH88_10665 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein
D RBH88_01045 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D RBH88_01660 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D RBH88_09395 Na/Pi symporter K03324 yjbB; phosphate:Na+ symporter
D RBH88_10765 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D RBH88_04070 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RBH88_05445 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D RBH88_03860 MnhB domain-containing protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D RBH88_03865 cation:proton antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D RBH88_03870 proton-conducting transporter membrane subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RBH88_03835 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D RBH88_03840 monovalent cation/H+ antiporter complex subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D RBH88_03845 mnhG; monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D RBH88_07415 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RBH88_08430 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D RBH88_01355 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D RBH88_01360 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D RBH88_10280 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RBH88_11215 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RBH88_08090 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RBH88_10285 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RBH88_11220 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RBH88_08095 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RBH88_10290 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RBH88_11225 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RBH88_09505 thiT; energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter
D RBH88_10595 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D RBH88_05990 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D RBH88_09780 manganese efflux pump MntP family protein K23242 mntP; manganese efflux pump family protein
D RBH88_07360 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RBH88_01880 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_05650 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_09455 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBH88_05635 acyl-CoA carboxylase subunit beta K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D RBH88_09470 acyl-CoA carboxylase subunit beta K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D RBH88_05645 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RBH88_09460 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RBH88_01495 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D RBH88_03955 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RBH88_05885 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RBH88_09800 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RBH88_03960 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RBH88_03950 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RBH88_05880 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RBH88_09805 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:amiz02044]
D RBH88_07995 TolC family protein K12340 tolC; outer membrane protein
D RBH88_09265 TolC family protein K12340 tolC; outer membrane protein
D RBH88_06315 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RBH88_06310 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D RBH88_09490 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RBH88_06265 secretin N-terminal domain-containing protein K02666 pilQ; type IV pilus assembly protein PilQ
D RBH88_04260 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RBH88_04275 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D RBH88_04280 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D RBH88_04285 response regulator K02282 cpaE; pilus assembly protein CpaE
D RBH88_04290 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBH88_04295 type II secretion system F family protein K12510 tadB; tight adherence protein B
D RBH88_04300 type II secretion system F family protein K12511 tadC; tight adherence protein C
D RBH88_04255 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D RBH88_02985 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D RBH88_08505 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RBH88_02185 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RBH88_02180 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RBH88_02005 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D RBH88_02075 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RBH88_02090 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RBH88_02150 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D RBH88_02165 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RBH88_02170 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RBH88_02175 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RBH88_06095 S8 family serine peptidase K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D RBH88_02730 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBH88_07330 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RBH88_09210 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBH88_07325 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RBH88_09295 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBH88_07050 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBH88_07590 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RBH88_04890 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RBH88_07335 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RBH88_06715 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:amiz02042]
D RBH88_03745 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBH88_06395 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:amiz02022]
D RBH88_01005 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RBH88_01010 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RBH88_09070 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D RBH88_09075 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RBH88_01455 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RBH88_04245 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RBH88_04250 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D RBH88_00195 HTH domain-containing protein K11692 K11692; two-component system, CitB family, response regulator DctR
D RBH88_09970 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D RBH88_09975 transporter substrate-binding domain-containing protein K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D RBH88_11320 response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D RBH88_02210 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RBH88_02155 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBH88_02205 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02035 Bacterial motility proteins [BR:amiz02035]
D RBH88_02210 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RBH88_09335 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBH88_10105 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBH88_09425 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D RBH88_02215 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D RBH88_02220 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RBH88_06040 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RBH88_02205 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RBH88_02155 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBH88_00200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_01565 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_04020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_06105 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_09500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_11330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBH88_02090 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RBH88_02165 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RBH88_02170 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RBH88_02175 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RBH88_02185 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RBH88_02180 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RBH88_02080 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RBH88_02145 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RBH88_02150 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D RBH88_02075 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RBH88_06950 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RBH88_06960 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RBH88_06955 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RBH88_02140 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D RBH88_02070 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RBH88_02060 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RBH88_02065 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RBH88_02115 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RBH88_06970 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RBH88_06965 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RBH88_06945 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RBH88_06900 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RBH88_06535 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D RBH88_02230 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RBH88_02130 motility protein A K02556 motA; chemotaxis protein MotA
D RBH88_02135 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RBH88_01480 ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RBH88_10530 ABC transporter substrate-binding protein/permease K02424 tcyA; L-cystine transport system substrate-binding protein
D RBH88_06895 fliW; flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D RBH88_06915 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RBH88_06875 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D RBH88_02125 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D RBH88_02190 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D RBH88_02195 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D RBH88_09490 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RBH88_06265 secretin N-terminal domain-containing protein K02666 pilQ; type IV pilus assembly protein PilQ
D RBH88_04255 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D RBH88_04260 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RBH88_04275 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D RBH88_04280 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D RBH88_04285 response regulator K02282 cpaE; pilus assembly protein CpaE
D RBH88_04290 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins [BR:amiz03037]
D RBH88_10740 cation:proton antiporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:amiz04812]
D RBH88_06975 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBH88_07285 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBH88_05960 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RBH88_05965 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RBH88_07265 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RBH88_07260 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RBH88_07255 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RBH88_11445 AAA family ATPase K03496 parA; chromosome partitioning protein
D RBH88_02780 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBH88_11450 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:amiz04147]
D RBH88_07345 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RBH88_05910 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBH88_05905 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RBH88_06510 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBH88_07395 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBH88_02665 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D RBH88_00240 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBH88_02645 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBH88_03055 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBH88_05250 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RBH88_07160 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RBH88_09225 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RBH88_08745 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RBH88_02675 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RBH88_00305 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_01545 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_08695 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RBH88_04240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RBH88_04995 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RBH88_07045 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RBH88_10600 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RBH88_02265 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RBH88_04500 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RBH88_09820 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RBH88_09695 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RBH88_02790 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBH88_00870 C-terminal binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBH88_11205 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBH88_04555 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RBH88_01680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_01685 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBH88_08715 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RBH88_05900 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:amiz02048]
D RBH88_10185 cas1b; type I-B CRISPR-associated endonuclease Cas1b K15342 cas1; CRISP-associated protein Cas1
D RBH88_10190 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D RBH88_10220 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RBH88_10180 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RBH88_10170 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D RBH88_10195 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D RBH88_10210 cas7b; type I-B CRISPR-associated protein Cas7/Csh2 K19115 csh2; CRISPR-associated protein Csh2
D RBH88_10215 cas5b; type I-B CRISPR-associated protein Cas5b K19116 cas5h; CRISPR-associated protein Cas5h
D RBH88_10135 cmr1; type III-B CRISPR module RAMP protein Cmr1 K07061 cmr1; CRISPR-associated protein Cmr1
D RBH88_10140 cas10; type III-B CRISPR-associated protein Cas10/Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2
D RBH88_10145 cmr3; type III-B CRISPR module-associated protein Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3
D RBH88_10150 cmr4; type III-B CRISPR module RAMP protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4
D RBH88_10155 cmr5; type III-B CRISPR module-associated protein Cmr5 K19141 cmr5; CRISPR-associated protein Cmr5
D RBH88_10160 cmr6; type III-B CRISPR module RAMP protein Cmr6 K19142 cmr6; CRISPR-associated protein Cmr6
D RBH88_03540 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RBH88_03515 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RBH88_03510 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RBH88_08290 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RBH88_08295 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE
D RBH88_03605 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D RBH88_05960 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RBH88_06975 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBH88_07285 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBH88_03905 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBH88_05245 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBH88_10030 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:amiz01504]
D RBH88_04740 catB; type B chloramphenicol O-acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D RBH88_09610 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RBH88_09660 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RBH88_08230 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D RBH88_04195 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RBH88_07995 TolC family protein K12340 tolC; outer membrane protein
D RBH88_09265 TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:amiz03100]
D RBH88_02270 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RBH88_01195 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D RBH88_01645 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D RBH88_01650 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D RBH88_05530 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RBH88_05525 FAD binding domain-containing protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RBH88_01970 iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D RBH88_01975 2-oxoacid:acceptor oxidoreductase family protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D RBH88_00225 NAD/NADP octopine/nopaline dehydrogenase family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D RBH88_00570 NAD/NADP octopine/nopaline dehydrogenase family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D RBH88_10660 NAD/NADP octopine/nopaline dehydrogenase family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D RBH88_10670 NAD/NADP octopine/nopaline dehydrogenase family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D RBH88_08055 NAD/NADP octopine/nopaline dehydrogenase family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D RBH88_04055 FAD-dependent oxidoreductase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3]
D RBH88_08275 hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RBH88_00105 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RBH88_11550 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RBH88_01855 Ni/Fe hydrogenase subunit alpha K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2]
D RBH88_01850 NADP oxidoreductase K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2]
D RBH88_01835 (2Fe-2S) ferredoxin domain-containing protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D RBH88_03890 nickel-dependent hydrogenase large subunit K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2]
D RBH88_03885 NADH-quinone oxidoreductase subunit C K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2]
D RBH88_03880 NADH-quinone oxidoreductase subunit B family protein K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D RBH88_08540 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D RBH88_08535 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D RBH88_03045 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RBH88_05450 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RBH88_08660 grdA; glycine/sarcosine/betaine reductase complex selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D RBH88_02885 grdA; glycine/sarcosine/betaine reductase complex selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D RBH88_00555 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D RBH88_03995 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D RBH88_07740 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D RBH88_02880 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D RBH88_00560 glycine/betaine/sarcosine/D-proline family reductase selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D RBH88_04000 glycine/betaine/sarcosine/D-proline family reductase selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D RBH88_07735 glycine/betaine/sarcosine/D-proline family reductase selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D RBH88_02890 grdB; glycine reductase complex selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D RBH88_02900 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D RBH88_02895 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D RBH88_08665 glycine/sarcosine/betaine reductase component B subunit K21578 grdI; betaine reductase complex component B subunit alpha [EC:1.21.4.4]
D RBH88_08670 glycine/betaine/sarcosine/D-proline family reductase selenoprotein B K21579 grdH; betaine reductase complex component B subunit beta [EC:1.21.4.4]
D RBH88_00850 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RBH88_01790 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RBH88_05770 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RBH88_08260 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RBH88_08940 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RBH88_00910 ortA; 2-amino-4-oxopentanoate thiolase subunit OrtA K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263]
D RBH88_00905 ortB; 2-amino-4-oxopentanoate thiolase subunit OrtB K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263]
D RBH88_01525 larB; nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D RBH88_06705 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RBH88_10320 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RBH88_06360 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RBH88_06365 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RBH88_06490 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D RBH88_00750 sugar transferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]
D RBH88_10830 thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D RBH88_01965 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RBH88_09330 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RBH88_06405 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D RBH88_10805 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RBH88_07210 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RBH88_06205 serine hydrolase domain-containing protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D RBH88_07910 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D RBH88_05040 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RBH88_10295 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RBH88_06195 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RBH88_08265 formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4]
D RBH88_00300 asparagine synthase-related protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D RBH88_00295 larC; nickel pincer cofactor biosynthesis protein LarC K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D RBH88_09775 gamma-polyglutamic acid synthetase K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-]
D RBH88_10355 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D RBH88_10360 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D RBH88_10335 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RBH88_04925 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RBH88_10580 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D RBH88_09445 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D RBH88_04640 ferredoxin K05337 fer; ferredoxin
D RBH88_10350 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D RBH88_10345 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D RBH88_10340 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D RBH88_10025 nifU; Fe-S cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D RBH88_05890 flavodoxin K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RBH88_02815 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RBH88_00710 O-antigen ligase family protein K16705 tuaE; teichuronic acid biosynthesis protein TuaE
D RBH88_03115 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D RBH88_07365 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D RBH88_10890 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
D RBH88_10895 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RBH88_05560 cold-shock protein K03704 cspA; cold shock protein
D RBH88_07955 cold-shock protein K03704 cspA; cold shock protein
D RBH88_08850 cold-shock protein K03704 cspA; cold shock protein
D RBH88_07670 Tex family protein K06959 tex; protein Tex
D RBH88_04700 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D RBH88_02255 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein
D RBH88_08485 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D RBH88_05565 tig; trigger factor K03545 tig; trigger factor
D RBH88_03155 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RBH88_02860 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D RBH88_02855 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D RBH88_02850 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D RBH88_02930 AIR synthase family protein K04655 hypE; hydrogenase expression/formation protein HypE
D RBH88_04915 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D RBH88_02015 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D RBH88_05520 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D RBH88_06760 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D RBH88_07290 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RBH88_02010 YraN family protein K07460 yraN; putative endonuclease
D RBH88_02020 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D RBH88_08320 replication-associated recombination protein A K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D RBH88_05225 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RBH88_08830 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D RBH88_03660 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RBH88_06595 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RBH88_01485 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RBH88_02865 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RBH88_07460 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RBH88_08895 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RBH88_09230 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RBH88_08100 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RBH88_02905 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RBH88_10315 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D RBH88_06710 jag; RNA-binding cell elongation regulator Jag/EloR K06346 jag; spoIIIJ-associated protein
D RBH88_07935 biotin-dependent carboxyltransferase family protein K06350 kipA; antagonist of KipI
D RBH88_07660 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
C 99995 Signaling proteins
D RBH88_02590 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D RBH88_01460 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D RBH88_06410 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D RBH88_06850 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D RBH88_09770 poly-gamma-glutamate biosynthesis protein PgsC/CapC K22116 capC; gamma-polyglutamate biosynthesis protein CapC
D RBH88_07990 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D RBH88_00585 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D RBH88_01015 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D RBH88_09390 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D RBH88_00135 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D RBH88_11580 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D RBH88_05945 substrate-binding domain-containing protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RBH88_06620 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D RBH88_09410 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RBH88_10125 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RBH88_05510 LemA family protein K03744 lemA; LemA protein
D RBH88_05955 SPOR domain-containing protein K03749 dedD; DedD protein
D RBH88_07755 SHOCT domain-containing protein K08982 K08982; putative membrane protein
D RBH88_09950 cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein
D RBH88_04345 AroM family protein K14591 aroM; protein AroM
C 99997 Function unknown
D RBH88_01365 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D RBH88_03290 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D RBH88_03270 contractile injection system protein, VgrG/Pvc8 family K06905 D; Bacteriophage probable baseplate hub protein
D RBH88_03240 phage tail sheath family protein K06907 FI; Bacteriophage tail sheath protein
D RBH88_03245 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D RBH88_01960 CoA-binding protein K06929 K06929; uncharacterized protein
D RBH88_01655 DNA-binding protein K06934 K06934; uncharacterized protein
D RBH88_07615 DNA-binding protein K06934 K06934; uncharacterized protein
D RBH88_06940 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D RBH88_07580 KH domain-containing protein K06960 K06960; uncharacterized protein
D RBH88_08625 zinc metallopeptidase K06973 K06973; uncharacterized protein
D RBH88_06130 VOC family protein K07032 K07032; uncharacterized protein
D RBH88_03065 SufD family Fe-S cluster assembly protein K07033 K07033; uncharacterized protein
D RBH88_00160 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D RBH88_11615 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D RBH88_09175 amidohydrolase family protein K07045 K07045; uncharacterized protein
D RBH88_11290 aldo/keto reductase K07079 K07079; uncharacterized protein
D RBH88_04220 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RBH88_00210 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RBH88_00815 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RBH88_05430 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RBH88_06585 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RBH88_05440 permease K07089 K07089; uncharacterized protein
D RBH88_10575 permease K07089 K07089; uncharacterized protein
D RBH88_07610 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RBH88_09340 YfcE family phosphodiesterase K07095 K07095; uncharacterized protein
D RBH88_00940 metallophosphoesterase K07098 K07098; uncharacterized protein
D RBH88_00165 transcription repressor NadR K07105 K07105; uncharacterized protein
D RBH88_11620 transcription repressor NadR K07105 K07105; uncharacterized protein
D RBH88_07830 YeeE/YedE thiosulfate transporter family protein K07112 K07112; uncharacterized protein
D RBH88_07825 YeeE/YedE thiosulfate transporter family protein K07112 K07112; uncharacterized protein
D RBH88_10100 yedE; YedE family putative selenium transporter K07112 K07112; uncharacterized protein
D RBH88_10415 FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D RBH88_09655 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D RBH88_06720 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D RBH88_04305 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D RBH88_02260 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D RBH88_02685 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D RBH88_10310 UPF0182 family protein K09118 K09118; uncharacterized protein
D RBH88_07545 Mut7-C RNAse domain-containing protein K09122 K09122; uncharacterized protein
D RBH88_06840 adenosine-specific kinase K09129 K09129; uncharacterized protein
D RBH88_08935 cyclophilin-like fold protein K09143 K09143; uncharacterized protein
D RBH88_09905 ferritin-like domain-containing protein K09700 K09700; uncharacterized protein
D RBH88_04330 DUF917 family protein K09703 K09703; uncharacterized protein
D RBH88_02235 FapA family protein K09749 K09749; uncharacterized protein
D RBH88_04125 FapA family protein K09749 K09749; uncharacterized protein
D RBH88_05285 DUF503 domain-containing protein K09764 K09764; uncharacterized protein
D RBH88_04025 ribonuclease H-like YkuK family protein K09776 K09776; uncharacterized protein
D RBH88_07595 sigma factor-like helix-turn-helix DNA-binding protein K09787 K09787; uncharacterized protein
D RBH88_02565 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D RBH88_00245 phosphatidylglycerol lysyltransferase domain-containing protein K01163 K01163; uncharacterized protein
D RBH88_05840 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D RBH88_02390 ELM1/GtrOC1 family putative glycosyltransferase K07276 K07276; uncharacterized protein
D RBH88_05270 YlxR family protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024