+E Transcription factors KO
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Transcription Factors - Anoxybacillus sp. PDR2
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D GRQ40_01385 ABC transporter substrate-binding protein K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
D GRQ40_01305 helix-turn-helix domain-containing protein K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
D GRQ40_05295 helix-turn-helix domain-containing protein K13652 K13652; AraC family transcriptional regulator
D GRQ40_07940 helix-turn-helix domain-containing protein K13653 K13653; AraC family transcriptional regulator
D GRQ40_08510 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
C LysR family
D GRQ40_07785 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D GRQ40_11355 LysR family transcriptional regulator K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD
D GRQ40_05015 LysR family transcriptional regulator K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD
D GRQ40_04530 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D GRQ40_08120 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D GRQ40_17480 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D GRQ40_13205 CBS domain-containing protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D GRQ40_11525 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GRQ40_05415 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GRQ40_17395 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GRQ40_17435 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GRQ40_14765 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GRQ40_07760 substrate-binding domain-containing protein K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D GRQ40_09550 substrate-binding domain-containing protein K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D GRQ40_03785 substrate-binding domain-containing protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
C GntR family
D GRQ40_07975 substrate-binding domain-containing protein K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D GRQ40_09355 UTRA domain-containing protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GRQ40_06990 UTRA domain-containing protein K03710 K03710; GntR family transcriptional regulator
D GRQ40_02470 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D GRQ40_14550 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D GRQ40_10680 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D GRQ40_09635 GntR family transcriptional regulator K07979 ytrA; GntR family transcriptional regulator
C TetR/AcrR family
D GRQ40_07165 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D GRQ40_14305 TetR family transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D GRQ40_09735 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
C Lrp/AsnC family
D GRQ40_09120 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D GRQ40_14195 gerE; spore germination protein GerE K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
C MarR family
D GRQ40_03705 HTH-type transcriptional regulator Hpr K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr
D GRQ40_05530 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D GRQ40_02785 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D GRQ40_14190 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D GRQ40_09690 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D GRQ40_07305 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D GRQ40_16395 MerR family transcriptional regulator K11923 cueR; MerR family transcriptional regulator, copper efflux regulator
D GRQ40_15965 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D GRQ40_08095 MerR family transcriptional regulator K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator
D GRQ40_09450 MerR family transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
C Fur family
D GRQ40_12335 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D GRQ40_13125 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D GRQ40_03060 perR; peroxide-responsive transcriptional repressor PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
D GRQ40_05340 helix-turn-helix domain-containing protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
C Rrf2 family
D GRQ40_08650 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D GRQ40_13590 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
C ArsR family
D GRQ40_09020 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D GRQ40_16490 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D GRQ40_16450 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D GRQ40_16375 metalloregulator ArsR/SmtB family transcription factor K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D GRQ40_11415 autorepressor SdpR family transcription factor K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
C XRE family
D GRQ40_01320 helix-turn-helix domain-containing protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D GRQ40_17085 helix-turn-helix domain-containing protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D GRQ40_12820 mntR; transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D GRQ40_11665 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D GRQ40_14940 helix-turn-helix domain-containing protein K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D GRQ40_00290 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D GRQ40_02050 AAA domain-containing protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D GRQ40_01790 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D GRQ40_06650 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D GRQ40_04950 helix-turn-helix domain-containing protein K07727 K07727; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D GRQ40_01650 antitoxin endoai K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C Other families
B Other transcription factors
C BglG family
D GRQ40_05705 PRD domain-containing protein K03480 glcT; transcriptional antiterminator
D GRQ40_10760 PRD domain-containing protein K03483 mtlR; mannitol operon transcriptional activator
D GRQ40_04745 PRD domain-containing protein K03483 mtlR; mannitol operon transcriptional activator
C Others
D GRQ40_09485 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D GRQ40_07840 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D GRQ40_07595 PucR family transcriptional regulator K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator
D GRQ40_00240 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D GRQ40_00335 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D GRQ40_18200 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GRQ40_18210 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GRQ40_11555 glycerol-3-phosphate responsive antiterminator GlpP K02443 glpP; glycerol uptake operon antiterminator
D GRQ40_12680 argR; transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D GRQ40_13310 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D GRQ40_03555 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D GRQ40_03575 tenI; thiazole tautomerase TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D GRQ40_00550 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D GRQ40_10610 paaX; phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D GRQ40_10955 phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D GRQ40_16315 PspC domain-containing protein K03973 pspC; phage shock protein C
D GRQ40_16180 hypothetical protein K05311 cggR; central glycolytic genes regulator
D GRQ40_11835 mtrB; trp RNA-binding attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D GRQ40_06330 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GRQ40_17875 RsfA family transcriptional regulator K06314 rsfA; prespore-specific regulator
D GRQ40_06165 RsfA family transcriptional regulator K06314 rsfA; prespore-specific regulator
D GRQ40_14450 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D GRQ40_02430 hutP; hut operon transcriptional regulator HutP K09683 hutP; hut operon positive regulatory protein
D GRQ40_03855 competence protein ComK K02250 comK; competence protein ComK
D GRQ40_17285 competence transcription factor (CTF) K02250 comK; competence protein ComK
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0