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Transcription Machinery - Anabaena sp. YBS01
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E EH233_04760 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E EH233_10940 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E EH233_10945 DNA-directed RNA polymerase subunit gamma K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E EH233_10950 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E EH233_17980 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E EH233_26745 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
E EH233_27740 RpoD/SigA family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
E EH233_13300 sigC; RNA polymerase sigma factor SigC K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E EH233_15975 RNA polymerase sigma factor, RpoD/SigA family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E EH233_15905 RNA polymerase sigma factor, RpoD/SigA family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E EH233_16795 RpoD/SigA family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E EH233_26015 RpoD/SigA family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E EH233_12595 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
E EH233_07665 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E EH233_22035 helicase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
E EH233_07795 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E EH233_19560 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
E EH233_18870 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
E EH233_16180 response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E EH233_19550 guanylate cyclase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E EH233_19665 response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E EH233_16185 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E EH233_07955 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E EH233_19395 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E EH233_19660 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E EH233_16175 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E EH233_29090 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E EH233_11470 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024