+D GENES KO #

  KEGG Orthology (KO) - Azoarcus olearius DQS4

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:aoa00010] D dqs_2443 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_1949 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_1642 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D dqs_1597 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D dqs_1042 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D dqs_2982 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D dqs_1517 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D dqs_2976 putative glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D dqs_2978 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D dqs_2947 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D dqs_2933 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D dqs_2277 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D dqs_2981 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D dqs_2300 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D dqs_1495 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D dqs_1494 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_3766 alcohol dehydrogenase classIII K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D dqs_0121 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D dqs_3110 putative quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D dqs_4009 putative quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_3079 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D dqs_2558 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D dqs_2913 putative phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D dqs_1810 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D dqs_0890 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:aoa00020] D dqs_1677 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D dqs_1656 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D dqs_1657 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D dqs_1257 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D dqs_1258 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D dqs_1678 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D dqs_1679 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_3470 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D dqs_3471 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D dqs_3445 coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D dqs_1674 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D dqs_1675 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D dqs_1672 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D dqs_1673 succinate dehydrogenase, hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D dqs_2559 putative fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D dqs_0767 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D dqs_1670 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D dqs_0890 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D dqs_1495 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D dqs_1494 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:aoa00030] D dqs_1642 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D dqs_3465 putative ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D dqs_2975 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D dqs_1587 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D dqs_2965 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D dqs_2913 putative phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D dqs_0829 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D dqs_2471 putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D dqs_3070 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D dqs_1270 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D dqs_2982 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D dqs_1042 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D dqs_1597 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:aoa00040] D dqs_2365 putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D dqs_1184 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D dqs_2155 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D dqs_3465 putative ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D dqs_3500 putative L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:aoa00051] D dqs_2214 xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D dqs_2913 putative phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D dqs_2364 putative mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D dqs_3730 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D dqs_3729 putative GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D dqs_3742 putative GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D dqs_3500 putative L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D dqs_1597 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D dqs_1042 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D dqs_3408 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D dqs_2982 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D dqs_1517 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D dqs_3931 putative IIA component of sugar transport PTS system K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:aoa00052] D dqs_3528 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D dqs_2155 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D dqs_2913 putative phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D dqs_2443 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_1949 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_1597 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D dqs_2440 putative alpha-D-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:aoa00053] D dqs_2365 putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D dqs_1184 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D dqs_2471 putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D dqs_0923 putative nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:aoa00500] D dqs_2440 putative alpha-D-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D dqs_2155 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D dqs_2441 putative glucan 1,3-beta-glucosidase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D dqs_2369 putative endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D dqs_1946 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D dqs_1950 putative glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D dqs_1875 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D dqs_1945 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D dqs_1877 putative trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D dqs_1948 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D dqs_1876 putative glucanohydrolase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D dqs_1943 putative glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68] D dqs_1947 putative malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D dqs_2913 putative phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D dqs_2443 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_1949 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_1642 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:aoa00520] D dqs_0770 putative beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D dqs_1772 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D dqs_3781 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D dqs_1512 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D dqs_3782 UDP-N-acetylglucosamine pyrophosphorylase/diamine N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D dqs_3028 hypothetical protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D dqs_3029 nucleotidyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D dqs_0885 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D dqs_3834 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D dqs_3417 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D dqs_3322 NDPsugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D dqs_0036 putative dTDP-glucose 4-6-dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D dqs_1951 putative dTDP-glucose 4,6-dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D dqs_2443 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_1949 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_2913 putative phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D dqs_2155 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D dqs_2365 putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D dqs_1184 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D dqs_3528 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D dqs_0923 putative nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D dqs_3931 putative IIA component of sugar transport PTS system K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D dqs_1642 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D dqs_2364 putative mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D dqs_2214 xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D dqs_3730 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D dqs_3729 putative GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D dqs_3742 putative GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D dqs_3408 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D dqs_3639 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D dqs_1946 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:aoa00620] D dqs_2558 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D dqs_1495 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D dqs_1494 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_2576 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2009 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2128 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_0121 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D dqs_3766 alcohol dehydrogenase classIII K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D dqs_3110 putative quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D dqs_4009 putative quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D dqs_3784 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D dqs_3783 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D dqs_2981 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D dqs_0987 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D dqs_0935 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D dqs_0933 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D dqs_1157 acetyl-coenzyme A carboxylase carboxyl transferase subunit b K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D dqs_3342 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_3079 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D dqs_3445 coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D dqs_1118 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D dqs_3575 D-lactate dehydrogenase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D dqs_1274 iron-sulfur binding oxidase K18930 dld; D-lactate dehydrogenase D dqs_3365 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D dqs_0762 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D dqs_1341 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D dqs_2183 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D dqs_1323 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D dqs_3975 Metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D dqs_3348 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D dqs_0891 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D dqs_1670 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D dqs_2559 putative fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D dqs_0767 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D dqs_1093 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D dqs_0890 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D dqs_2300 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D dqs_1267 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_3294 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D dqs_3666 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D dqs_0561 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:aoa00630] D dqs_1228 AceA protein K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D dqs_2558 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D dqs_1267 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D dqs_1670 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D dqs_1677 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D dqs_1656 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D dqs_1657 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_1124 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D dqs_1125 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D dqs_3327 hypothetical protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D dqs_0758 propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D dqs_0756 propionyl-coa carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D dqs_0754 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D dqs_1099 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D dqs_1101 glycolate oxidase FAD binding subunit K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D dqs_1102 glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D dqs_3919 putative catalase K03781 katE; catalase [EC:1.11.1.6] D dqs_0896 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D dqs_3464 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D dqs_1740 hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D dqs_2778 HAD superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D dqs_3146 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D dqs_2940 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D dqs_1400 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D dqs_1402 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1401 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D dqs_1271 putative hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D dqs_3502 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D dqs_1270 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D dqs_4004 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D dqs_3172 hypothetical protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D dqs_3625 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D dqs_3173 formate dehydrogenase (NADP+) subunit beta K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D dqs_3624 formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D dqs_3622 putative formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D dqs_3893 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D dqs_3138 formylglutamte aminohyrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:aoa00640] D dqs_2558 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D dqs_3311 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D dqs_3784 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D dqs_3783 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_0405 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D dqs_3455 zinc-binding alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D dqs_3313 dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0476 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D dqs_0987 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D dqs_0935 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D dqs_0933 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D dqs_1157 acetyl-coenzyme A carboxylase carboxyl transferase subunit b K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D dqs_0692 putative malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D dqs_2229 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D dqs_0758 propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D dqs_0756 propionyl-coa carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D dqs_0754 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D dqs_3471 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D dqs_3470 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D dqs_1657 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:aoa00650] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_1136 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D dqs_0314 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D dqs_3174 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D dqs_0479 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D dqs_0476 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0405 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D dqs_2576 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2009 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2128 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_3327 hypothetical protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D dqs_1472 poly-beta-hydroxybutyrate synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D dqs_1123 polyhydroxyalkanoate synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D dqs_0400 poly-beta-hydroxybutyrate synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D dqs_1124 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D dqs_1125 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D dqs_4004 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D dqs_1674 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D dqs_1675 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D dqs_1672 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D dqs_1673 succinate dehydrogenase, hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D dqs_0236 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D dqs_2075 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D dqs_3445 coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D dqs_3199 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D dqs_2282 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D dqs_3779 D-(-)-3-hydroxybutyrate oligomer hydrolase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22] D dqs_1334 aromatic/alkene monooxygenase subunit alpha K18223 prmA; propane 2-monooxygenase large subunit [EC:1.14.13.227] D dqs_1336 aromatic/alkene monooxygenase subunit beta K18224 prmC; propane 2-monooxygenase small subunit [EC:1.14.13.227] D dqs_1337 phenol 2-monooxygenase K18226 prmD; propane monooxygenase coupling protein D dqs_1335 aromatic/alkene monooxygenase subunit gamma K18225 prmB; propane monooxygenase reductase component [EC:1.18.1.-] D dqs_3286 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_2618 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_1142 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_3287 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D dqs_1143 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:aoa00660] D dqs_3286 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_2618 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_1142 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_3287 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D dqs_1143 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D dqs_3471 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D dqs_3470 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D dqs_2698 hypothetical protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D dqs_1147 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D dqs_1148 isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D dqs_1149 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:aoa00562] D dqs_2972 putative inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D dqs_2176 putative inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D dqs_1517 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:aoa00190] D dqs_1520 putative NADH-ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D dqs_1521 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D dqs_0899 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D dqs_1522 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D dqs_1523 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D dqs_1524 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D dqs_1525 putative NADH-ubiquinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D dqs_1526 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D dqs_1527 putative NADH-ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D dqs_1528 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D dqs_1529 NADH-ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D dqs_1530 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D dqs_1531 NADH-ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D dqs_1532 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D dqs_1533 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D dqs_1916 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D dqs_1984 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D dqs_1674 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D dqs_1675 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D dqs_1672 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D dqs_1673 succinate dehydrogenase, hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D dqs_1034 ubiquinol-cytochrome c reductase iron-sulfur protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D dqs_1350 ubiquinol-cytochrome C reductase iron-sulfur protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D dqs_1035 ubiquinol-cytochrome c reductase cytochrome b protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D dqs_1036 putative ubiquinol-cytochrome c reductase cytochrome c1 protein K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D dqs_3432 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D dqs_3437 cytochrome-c oxidase K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D dqs_3441 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D dqs_1907 quinol oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D dqs_3442 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D dqs_1906 quniol oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D dqs_3439 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D dqs_3433 putative cytochrome aa3 oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D dqs_1462 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D dqs_1463 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D dqs_1464 Cbb3-type cytochrome oxidase subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D dqs_1465 cytochrome c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D dqs_1921 cyanide insensitive terminal oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D dqs_1347 cytochrome bd type terminal oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D dqs_1922 cyanide insensitive terminal oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D dqs_1346 cytochrome bd type terminal oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D dqs_3643 cytochrome c-552 K08738 CYC; cytochrome c D dqs_0114 hypothetical protein K08738 CYC; cytochrome c D dqs_3077 cytochrome c-552 precourser K08738 CYC; cytochrome c D dqs_3104 hypothetical protein K08738 CYC; cytochrome c D dqs_0166 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D dqs_0168 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D dqs_0167 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D dqs_0165 putative ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D dqs_0169 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D dqs_0162 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D dqs_0164 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D dqs_0163 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D dqs_1480 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D dqs_1839 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:aoa00710] D dqs_2978 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D dqs_2976 putative glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D dqs_2982 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D dqs_1042 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D dqs_2975 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D dqs_2965 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D dqs_2974 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D dqs_1517 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D dqs_3465 putative ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D dqs_1587 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D dqs_1093 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D dqs_3348 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D dqs_0891 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D dqs_1670 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:aoa00720] D dqs_2300 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D dqs_1093 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D dqs_1670 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D dqs_2559 putative fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D dqs_0767 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D dqs_1674 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D dqs_1675 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D dqs_1672 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D dqs_1673 succinate dehydrogenase, hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D dqs_3470 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D dqs_3471 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_1257 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D dqs_1258 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D dqs_1656 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D dqs_1657 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D dqs_0987 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D dqs_0935 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D dqs_0933 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D dqs_1157 acetyl-coenzyme A carboxylase carboxyl transferase subunit b K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D dqs_0754 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D dqs_1499 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D dqs_0654 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D dqs_3071 hypothetical protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D dqs_3783 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D dqs_3784 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D dqs_2558 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:aoa00680] D dqs_3766 alcohol dehydrogenase classIII K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D dqs_3767 esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D dqs_3172 hypothetical protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D dqs_3625 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D dqs_3173 formate dehydrogenase (NADP+) subunit beta K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D dqs_3624 formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D dqs_3622 putative formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D dqs_3071 hypothetical protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D dqs_2940 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D dqs_0896 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D dqs_1270 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D dqs_2277 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D dqs_1093 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D dqs_1670 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D dqs_2982 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D dqs_1042 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D dqs_1597 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D dqs_2388 methylamine dehydrogenase, L chain K15228 mauA; methylamine dehydrogenase light chain [EC:1.4.9.1] D dqs_2391 putative methylamine dehydrogenase heavy chain K15229 mauB; methylamine dehydrogenase heavy chain [EC:1.4.9.1] D dqs_1354 quinohemoprotein amine dehydrogenase subunit alpha K08685 qhpA; quinohemoprotein amine dehydrogenase [EC:1.4.9.1] D dqs_3147 amido phosphoribosyltransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D dqs_3148 protein GlxC K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D dqs_3149 glutamate synthase large subunit K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D dqs_3784 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D dqs_3783 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D dqs_2558 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D dqs_2300 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D dqs_2947 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D dqs_2933 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D dqs_3230 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D dqs_1175 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D dqs_1818 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D dqs_3894 phosphoserine phosphatase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] C 00910 Nitrogen metabolism [PATH:aoa00910] D dqs_1408 putative nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D dqs_2625 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D dqs_1016 nitrate transport system periplasmic-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D dqs_2626 nitrate ABC transporter, permease K15577 nrtB; nitrate/nitrite transport system permease protein D dqs_1017 putative nitrate transport system permease K15577 nrtB; nitrate/nitrite transport system permease protein D dqs_2627 nitrate ABC transporter, ATP-binding protein C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D dqs_1018 putative nitrate transport system ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D dqs_4085 nitrate reductase catalytic subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D dqs_0740 nitrate reductase catalytic subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D dqs_4082 diheme cytochrome c K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D dqs_0739 diheme cytochrome C K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D dqs_1021 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D dqs_1020 putative nitrate reductase small subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D dqs_1288 nitrite reductase (NAD(P)H) large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D dqs_1289 nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D dqs_3224 putative nitric-oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D dqs_3223 putative nitric-oxide reductase subunit C K02305 norC; nitric oxide reductase subunit C D dqs_3244 nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D dqs_0549 nitrogenase molybdenum-iron protein subunit alpha K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D dqs_0550 Mo-protein dinitrogenase reductase subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D dqs_0548 putative nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D dqs_1266 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D dqs_3973 putative 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D dqs_0336 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D dqs_3146 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D dqs_3787 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D dqs_3786 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D dqs_2628 cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104] D dqs_4120 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D dqs_0913 putative carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:aoa00920] D dqs_1457 putative sulfate transport system substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D dqs_2406 putative sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D dqs_2493 putative periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D dqs_1456 sulfate transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D dqs_1455 putative sulfate transport system permease K02047 cysW; sulfate/thiosulfate transport system permease protein D dqs_1454 putative sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D dqs_2530 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D dqs_2532 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D dqs_2529 ABC-type transporter membrane permease K15554 ssuC; sulfonate transport system permease protein D dqs_2528 ABC transporter-like protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D dqs_2519 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D dqs_2531 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D dqs_0439 putative sulfate adenylyltransferase subunit 1/adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D dqs_0440 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D dqs_1650 putative ATP adenylyltransferase K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53] D dqs_0441 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D dqs_1254 sulfur covalently-binding protein K17226 soxY; sulfur-oxidizing protein SoxY D dqs_3111 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY D dqs_1255 phosphodiesterase I K17227 soxZ; sulfur-oxidizing protein SoxZ D dqs_0443 putative sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D dqs_1252 sulfide dehydrogenase, flavoprtein subunit K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D dqs_1253 putative sulfide dehydrogenase, cytochrome subunit K17230 fccA; cytochrome subunit of sulfide dehydrogenase D dqs_2502 putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D dqs_2889 putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D dqs_0560 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D dqs_0378 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D dqs_2174 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D dqs_2543 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D dqs_4114 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D dqs_1162 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D dqs_2762 putative ferredoxin subunit of nitrite reductase K15762 tmoC; toluene monooxygenase system ferredoxin subunit D dqs_1845 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D dqs_2647 putative acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D dqs_1852 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D dqs_2651 enoyl-CoA hydratase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:aoa00061] D dqs_0987 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D dqs_0935 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D dqs_0933 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D dqs_1157 acetyl-coenzyme A carboxylase carboxyl transferase subunit b K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D dqs_1751 acyl carrier protein K02078 acpP; acyl carrier protein D dqs_0275 hypothetical protein K02078 acpP; acyl carrier protein D dqs_0298 acyl carrier protein K02078 acpP; acyl carrier protein D dqs_3389 hypothetical protein K02078 acpP; acyl carrier protein D dqs_1749 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D dqs_1748 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D dqs_0305 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D dqs_0297 putative Beta-ketoacyl synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D dqs_4022 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D dqs_4055 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D dqs_1752 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D dqs_1750 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D dqs_4058 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D dqs_2053 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D dqs_0272 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D dqs_2262 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D dqs_1692 enoyl-acyl carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D dqs_3304 putative long chain fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_3590 putative Acetyl-coenzyme A synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_1141 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:aoa00071] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0480 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D dqs_0476 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0479 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D dqs_0405 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D dqs_2086 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D dqs_0474 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D dqs_2079 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D dqs_2085 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D dqs_3304 putative long chain fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_3590 putative Acetyl-coenzyme A synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_1141 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_0159 bifunctional Aas protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D dqs_2686 putidaredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D dqs_2624 rubredoxin K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D dqs_3766 alcohol dehydrogenase classIII K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D dqs_0121 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:aoa00074] D dqs_1771 holo K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D dqs_1751 acyl carrier protein K02078 acpP; acyl carrier protein D dqs_0275 hypothetical protein K02078 acpP; acyl carrier protein D dqs_0298 acyl carrier protein K02078 acpP; acyl carrier protein D dqs_3389 hypothetical protein K02078 acpP; acyl carrier protein D dqs_1749 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:aoa00561] D dqs_1270 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2886 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D dqs_1747 putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D dqs_3360 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D dqs_0858 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D dqs_0925 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D dqs_0930 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D dqs_4049 putative lipase family protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D dqs_1039 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:aoa00564] D dqs_2953 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D dqs_2885 putative glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D dqs_0707 hypothetical protein K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D dqs_0072 hypothetical protein K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D dqs_3360 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D dqs_0858 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D dqs_0925 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D dqs_0930 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D dqs_1932 hypothetical protein K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D dqs_3347 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D dqs_1114 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D dqs_2990 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D dqs_0159 bifunctional Aas protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D dqs_3981 ethanolamine ammonia-lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D dqs_3982 putative ethanolamine ammonia-lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D dqs_0737 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D dqs_2059 putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D dqs_3289 putative CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D dqs_3692 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D dqs_1774 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D dqs_0519 putative phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D dqs_0817 putative cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D dqs_1903 putative cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:aoa00565] D dqs_3347 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D dqs_1932 hypothetical protein K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D dqs_3347 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D dqs_3347 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:aoa00592] D dqs_3347 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D dqs_0480 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:aoa01040] D dqs_3251 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D dqs_1816 acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D dqs_2255 putative acyl-CoA thioesterase I K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D dqs_0477 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:aoa00230] D dqs_1534 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D dqs_2913 putative phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D dqs_0829 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D dqs_1161 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D dqs_3035 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D dqs_3256 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D dqs_1384 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D dqs_2291 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D dqs_3268 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D dqs_1501 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D dqs_1500 phosphoribosylaminoimidazole carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D dqs_3012 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D dqs_0972 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D dqs_3034 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D dqs_1606 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D dqs_1197 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D dqs_2317 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D dqs_1121 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D dqs_3815 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D dqs_1703 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D dqs_0995 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D dqs_4107 putative deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D dqs_2344 xanthine dehydrogenase K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D dqs_2345 xanthine dehydrogenase K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D dqs_1704 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D dqs_2688 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D dqs_2356 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D dqs_4096 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D dqs_1535 putative ribonucleoside reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D dqs_3788 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D dqs_4094 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D dqs_1840 putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D dqs_1838 GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D dqs_0697 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D dqs_3763 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D dqs_1010 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D dqs_0928 putative carbohydrate kinase K00856 ADK; adenosine kinase [EC:2.7.1.20] D dqs_0126 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D dqs_0250 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D dqs_1596 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D dqs_1650 putative ATP adenylyltransferase K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53] D dqs_0924 diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D dqs_0439 putative sulfate adenylyltransferase subunit 1/adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D dqs_0440 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D dqs_1297 putative transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D dqs_1295 hypothetical protein K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D dqs_1294 deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5] D dqs_1293 allantoicase K01477 alc; allantoicase [EC:3.5.3.4] D dqs_1292 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D dqs_3647 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D dqs_3648 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D dqs_3650 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:aoa00240] D dqs_1505 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D dqs_1504 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D dqs_3605 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D dqs_3606 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D dqs_0944 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D dqs_2343 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D dqs_3808 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D dqs_3804 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D dqs_2062 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D dqs_0995 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D dqs_3754 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D dqs_0730 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D dqs_2279 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D dqs_1606 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D dqs_1197 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D dqs_2317 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D dqs_3918 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D dqs_3604 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D dqs_3920 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D dqs_3337 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D dqs_1535 putative ribonucleoside reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D dqs_1718 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D dqs_1250 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D dqs_3334 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D dqs_0369 hypothetical protein K00560 thyA; thymidylate synthase [EC:2.1.1.45] D dqs_2098 HPA reductase K09024 rutF; flavin reductase [EC:1.5.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:aoa00250] D dqs_1754 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D dqs_0447 L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D dqs_0449 periplasmic L-asparaginase II K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D dqs_3384 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D dqs_3410 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D dqs_3412 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D dqs_2211 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D dqs_0448 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D dqs_2319 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D dqs_1090 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D dqs_1010 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D dqs_0972 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D dqs_3605 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D dqs_0236 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D dqs_2075 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D dqs_3787 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D dqs_3786 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D dqs_3904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D dqs_3146 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D dqs_1505 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D dqs_1504 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D dqs_3781 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D dqs_1161 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:aoa00260] D dqs_3247 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D dqs_1150 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D dqs_2210 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D dqs_3747 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D dqs_3894 phosphoserine phosphatase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D dqs_2209 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D dqs_2940 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D dqs_0896 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D dqs_1270 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D dqs_2947 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D dqs_2933 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D dqs_3230 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D dqs_1175 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D dqs_1818 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D dqs_2919 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D dqs_1400 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D dqs_1402 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1401 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D dqs_3289 putative CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D dqs_0510 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D dqs_1156 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D dqs_1155 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:aoa00270] D dqs_0560 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D dqs_0378 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D dqs_2174 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D dqs_2543 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D dqs_3519 putative transaminase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D dqs_3877 B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D dqs_0658 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D dqs_4129 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D dqs_2179 putative spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D dqs_1121 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D dqs_2747 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D dqs_2153 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D dqs_3499 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D dqs_1735 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D dqs_0656 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D dqs_3247 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D dqs_1150 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D dqs_2210 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D dqs_4114 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D dqs_2326 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D dqs_1546 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D dqs_0483 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D dqs_1162 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D dqs_0142 branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D dqs_2910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D dqs_3907 GshA protein K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D dqs_3906 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D dqs_2502 putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D dqs_2889 putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D dqs_1670 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D dqs_1185 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D dqs_3230 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D dqs_1175 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:aoa00280] D dqs_0142 branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D dqs_2910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_0405 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D dqs_2086 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D dqs_3216 acyl-coa dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0476 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D dqs_0480 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D dqs_0758 propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D dqs_0756 propionyl-coa carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D dqs_0754 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2229 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D dqs_3202 biotin carboxylase K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D dqs_3204 carboxyltransferase subunit of acetyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D dqs_3203 enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D dqs_3199 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D dqs_2282 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:aoa00290] D dqs_0510 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D dqs_1147 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D dqs_1148 isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D dqs_1149 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D dqs_3286 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_2618 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_1142 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_3287 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D dqs_1143 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D dqs_3288 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D dqs_0701 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D dqs_0142 branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D dqs_2910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D dqs_2211 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D dqs_3294 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D dqs_3666 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:aoa00300] D dqs_2210 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D dqs_3247 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D dqs_1150 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D dqs_1206 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D dqs_2737 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D dqs_2160 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D dqs_2321 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D dqs_1310 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D dqs_2159 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D dqs_2162 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D dqs_0662 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D dqs_3385 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D dqs_3799 LysA2 protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D dqs_0950 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D dqs_0951 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:aoa00310] D dqs_2251 piperideine-6-carboxylate dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D dqs_1679 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_2079 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D dqs_2085 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0476 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0236 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D dqs_2075 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D dqs_2078 hypothetical protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D dqs_0190 D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:aoa00220] D dqs_2320 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D dqs_2319 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D dqs_1090 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D dqs_3647 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D dqs_3648 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D dqs_3650 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D dqs_0449 periplasmic L-asparaginase II K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D dqs_3146 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D dqs_1505 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D dqs_1504 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D dqs_2211 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D dqs_3856 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D dqs_2969 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D dqs_0966 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D dqs_3381 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D dqs_4060 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D dqs_2321 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D dqs_1310 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:aoa00330] D dqs_3920 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D dqs_3336 putative Orn/Arg/Lys decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D dqs_4129 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D dqs_2179 putative spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2919 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D dqs_2487 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D dqs_2111 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D dqs_0388 hypothetical protein K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D dqs_3609 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D dqs_3904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D dqs_3302 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D dqs_3355 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D dqs_1298 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D dqs_0190 D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:aoa00340] D dqs_0887 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D dqs_1009 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D dqs_3479 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D dqs_3480 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D dqs_3482 1-(5-phosphoribosyl)-5 K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D dqs_3483 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D dqs_3481 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D dqs_3484 Imidazoleglycerol-phosphate dehydratase protein K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D dqs_3485 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_1177 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_3976 putative inositol monophosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D dqs_0888 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D dqs_3138 formylglutamte aminohyrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2919 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D dqs_1873 hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:aoa00350] D dqs_3485 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_1177 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_1735 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D dqs_1308 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D dqs_3821 maleylpyruvate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D dqs_3823 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D dqs_2919 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D dqs_2381 succinate semialdehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D dqs_3156 succinate semialdehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D dqs_3766 alcohol dehydrogenase classIII K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D dqs_0121 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D dqs_2693 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D dqs_0236 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D dqs_2075 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D dqs_2564 gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4] D dqs_2567 maleylpyruvate isomerase K01801 nagL; maleylpyruvate isomerase [EC:5.2.1.4] D dqs_0688 hypothetical protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] D dqs_2565 fumarylpyruvate hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:aoa00360] D dqs_2919 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D dqs_2381 succinate semialdehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D dqs_3156 succinate semialdehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D dqs_2523 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D dqs_2539 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D dqs_0316 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D dqs_0315 phenylacetic acid degradation protein PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D dqs_0317 phenylacetate-CoA oxygenase subunit PaaA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D dqs_0318 phenylacetate-CoA oxygenase subunit PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D dqs_0319 phenylacetic acid degradation protein PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D dqs_0320 phenylacetic acid degradation protein PaaD K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D dqs_0321 phenylacetic acid degradation NADH oxidoreductase PaaE K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D dqs_0313 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D dqs_0481 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_1136 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D dqs_0314 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D dqs_3174 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D dqs_2101 phenylacetyl-CoA:acceptor oxidoreductase K18361 padB; phenylacetyl-CoA:acceptor oxidoreductase [EC:1.17.5.1 3.1.2.25] D dqs_2102 phenylacetyl-CoA:acceptor oxidoreductase K18362 padC; phenylacetyl-CoA:acceptor oxidoreductase 27-kDa subunit D dqs_2103 phenylacetyl-CoA:acceptor oxidoreductase K18363 padD; phenylacetyl-CoA:acceptor oxidoreductase 26-kDa subunit D dqs_3485 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_1177 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_1735 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D dqs_1308 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D dqs_4068 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D dqs_1041 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D dqs_0190 D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D dqs_3125 putative catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D dqs_2487 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D dqs_2111 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D dqs_2686 putidaredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D dqs_3826 FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D dqs_2130 3-(2,3-dihydroxyphenyl)propionate dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D dqs_2131 2-hydroxy-6-ketonona-2,4-dienedoic acid hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D dqs_2129 MhpD protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:aoa00380] D dqs_2579 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D dqs_2005 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D dqs_1679 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_2079 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D dqs_2085 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0476 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2919 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2487 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D dqs_2111 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D dqs_2110 indole acetimide hydrolase K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-] D dqs_3919 putative catalase K03781 katE; catalase [EC:1.11.1.6] D dqs_3125 putative catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:aoa00400] D dqs_1819 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D dqs_2923 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D dqs_3789 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D dqs_0936 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D dqs_0776 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D dqs_3790 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D dqs_1179 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D dqs_1144 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D dqs_3463 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D dqs_3462 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D dqs_3461 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D dqs_1154 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D dqs_3460 indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D dqs_1156 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D dqs_1155 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D dqs_1176 chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D dqs_1178 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D dqs_3485 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_1177 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_1735 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D dqs_4064 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:aoa00410] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_3277 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D dqs_2229 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0476 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D dqs_0405 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D dqs_0692 putative malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] C 00430 Taurine and hypotaurine metabolism [PATH:aoa00430] D dqs_1598 Ggt protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D dqs_3783 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D dqs_3784 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:aoa00440] D dqs_2833 putative phosphoenolpyruvate phosphomutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104] D dqs_2834 phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] C 00450 Selenocompound metabolism [PATH:aoa00450] D dqs_3519 putative transaminase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D dqs_3877 B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D dqs_0381 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D dqs_1485 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D dqs_0463 putative thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D dqs_0439 putative sulfate adenylyltransferase subunit 1/adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D dqs_0440 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D dqs_1815 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D dqs_3340 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:aoa00460] D dqs_1598 Ggt protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D dqs_0447 L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D dqs_2940 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:aoa00470] D dqs_4069 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D dqs_0190 D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D dqs_0957 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D dqs_0449 periplasmic L-asparaginase II K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D dqs_2890 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D dqs_0953 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D dqs_0662 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D dqs_3385 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D dqs_3799 LysA2 protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D dqs_4068 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D dqs_1041 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:aoa00480] D dqs_1598 Ggt protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D dqs_0053 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D dqs_0054 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D dqs_2408 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D dqs_1894 glutamate-cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D dqs_3907 GshA protein K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D dqs_3906 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D dqs_3044 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D dqs_3279 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D dqs_1374 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D dqs_0504 putative stringent starvation protein A K00799 GST; glutathione S-transferase [EC:2.5.1.18] D dqs_2398 putative glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D dqs_1664 putative glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D dqs_0123 glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D dqs_0373 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D dqs_0728 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D dqs_1257 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D dqs_1258 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D dqs_1392 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D dqs_3942 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D dqs_4129 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D dqs_2179 putative spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:aoa00540] D dqs_2052 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D dqs_0961 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D dqs_2054 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D dqs_1163 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D dqs_2051 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D dqs_1593 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D dqs_0864 sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D dqs_2278 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D dqs_0863 phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D dqs_1595 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D dqs_0922 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D dqs_0659 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D dqs_0660 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D dqs_1878 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D dqs_0941 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D dqs_3706 ADP-heptose synthase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D dqs_0857 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D dqs_1956 heptose phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D dqs_3443 ADP-heptose synthase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D dqs_3707 putative ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D dqs_3709 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D dqs_2451 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D dqs_3708 ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D dqs_3711 lipopolysaccharide core biosynthesis protein K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D dqs_3710 glucosyltransferase I K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D dqs_2448 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:aoa00541] D dqs_2155 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D dqs_3528 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D dqs_2365 putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D dqs_1184 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D dqs_0923 putative nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D dqs_2030 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D dqs_2032 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D dqs_2029 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D dqs_2031 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D dqs_3639 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D dqs_2214 xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D dqs_3730 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D dqs_3729 putative GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D dqs_3742 putative GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D dqs_3782 UDP-N-acetylglucosamine pyrophosphorylase/diamine N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D dqs_3417 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D dqs_3726 putative UDP-glucose 4-epimerase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426] D dqs_3322 NDPsugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:aoa00550] D dqs_0885 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D dqs_3834 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D dqs_0956 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D dqs_0953 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D dqs_0950 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D dqs_0957 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D dqs_0951 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D dqs_2060 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D dqs_0781 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D dqs_1935 phosphoesterase family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D dqs_0952 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D dqs_0955 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D dqs_0775 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D dqs_3796 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D dqs_0186 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D dqs_0949 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D dqs_0189 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D dqs_3801 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:aoa00552] D dqs_0781 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D dqs_1935 phosphoesterase family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D dqs_2836 teichoic acid biosynthesis protein B K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D dqs_1039 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:aoa00543] D dqs_0560 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D dqs_0378 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D dqs_2174 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D dqs_2370 putative glycosyltransferase K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252] D dqs_2368 putative glucuronyl transferase K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264] D dqs_2372 putative acetyltransferase K13663 gumF; acyltransferase [EC:2.3.1.-] D dqs_2366 putative glycosyltransferase K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:aoa00730] D dqs_0911 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D dqs_3594 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D dqs_0912 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D dqs_0562 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2171 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2172 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_1313 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D dqs_4112 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D dqs_3593 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D dqs_0520 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D dqs_1639 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D dqs_3999 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D dqs_1596 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:aoa00740] D dqs_0332 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D dqs_2942 AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D dqs_0331 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D dqs_0333 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D dqs_1321 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D dqs_3667 nitroreductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D dqs_1534 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D dqs_3966 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:aoa00750] D dqs_2562 putative D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D dqs_1175 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D dqs_3025 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D dqs_1770 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D dqs_2209 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:aoa00760] D dqs_1754 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D dqs_0815 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D dqs_2208 nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D dqs_1606 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D dqs_1197 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D dqs_3750 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D dqs_1482 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D dqs_0518 CinA-like protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D dqs_1973 CinA domain-containing protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D dqs_3805 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D dqs_2741 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D dqs_1104 NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D dqs_1105 NAD(P) transhydrogenase subunit alpha part 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D dqs_1106 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D dqs_0236 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D dqs_2075 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:aoa00770] D dqs_3286 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_2618 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_1142 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D dqs_3287 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D dqs_1143 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D dqs_3288 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D dqs_0701 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D dqs_3276 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D dqs_2516 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D dqs_2615 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D dqs_2768 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D dqs_0206 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D dqs_2149 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D dqs_3277 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D dqs_0807 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D dqs_1249 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D dqs_0837 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D dqs_0805 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D dqs_1771 holo K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D dqs_2504 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D dqs_0142 branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D dqs_2910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:aoa00780] D dqs_2046 biotin synthesis protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D dqs_2957 putative biotin synthesis protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D dqs_0297 putative Beta-ketoacyl synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D dqs_4022 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D dqs_4055 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D dqs_1752 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D dqs_1750 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D dqs_4058 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D dqs_2053 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D dqs_0272 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D dqs_2262 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D dqs_1692 enoyl-acyl carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D dqs_2045 BioH protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D dqs_2044 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D dqs_2043 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D dqs_2047 dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D dqs_2956 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D dqs_0808 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D dqs_2526 hypothetical protein K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:aoa00785] D dqs_0192 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D dqs_0193 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D dqs_4015 putative lipoate protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1495 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D dqs_1494 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D dqs_1678 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D dqs_1679 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D dqs_1400 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D dqs_1402 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D dqs_1401 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:aoa00790] D dqs_2265 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D dqs_1312 putative GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D dqs_3999 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D dqs_3359 FolB protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D dqs_3273 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D dqs_1511 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D dqs_3335 FolA protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D dqs_1158 dihydrofolate synthase/tetrahydrofolylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D dqs_0332 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D dqs_0212 para-aminobenzoate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D dqs_3250 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D dqs_2429 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D dqs_0497 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33] D dqs_0425 putative radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D dqs_0424 ExsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D dqs_3652 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D dqs_1730 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D dqs_3061 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D dqs_1687 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D dqs_2927 molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D dqs_1685 molybdopterin cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D dqs_2964 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D dqs_0034 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D dqs_3632 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:aoa00670] D dqs_3335 FolA protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D dqs_1499 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D dqs_2940 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D dqs_3256 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D dqs_3034 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D dqs_0110 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D dqs_1402 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D dqs_3877 B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D dqs_3334 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D dqs_0369 hypothetical protein K00560 thyA; thymidylate synthase [EC:2.1.1.45] D dqs_3893 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D dqs_0654 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:aoa00860] D dqs_1602 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D dqs_1081 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D dqs_3592 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D dqs_2960 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D dqs_1094 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D dqs_1095 HemD protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D dqs_4122 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D dqs_3036 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D dqs_1474 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D dqs_3637 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D dqs_1904 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D dqs_2743 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D dqs_1096 uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D dqs_1019 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D dqs_3694 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D dqs_3432 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D dqs_3433 putative cytochrome aa3 oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D dqs_3516 hypothetical protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D dqs_3673 hypothetical protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D dqs_3677 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D dqs_3680 precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D dqs_3672 precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D dqs_3678 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D dqs_3679 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D dqs_3675 cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D dqs_3676 precorrin-6Y C(5,15)-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D dqs_3674 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D dqs_3693 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D dqs_2786 cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D dqs_2916 hypothetical protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D dqs_3695 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D dqs_3660 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D dqs_2306 CobD/CbiB family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D dqs_3661 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D dqs_3662 cobalamin biosynthesis protein K02225 cobC1; cobalamin biosynthesis protein CobC D dqs_3700 cobinamide kinase/cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D dqs_3704 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D dqs_3703 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D dqs_3705 putative alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D dqs_0685 putative bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D dqs_1933 putative bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D dqs_0261 putative bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:aoa00130] D dqs_3178 thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D dqs_2648 thiesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D dqs_2084 4-hydroxybenzoyl CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D dqs_0489 putative chorismate:pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D dqs_4064 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] D dqs_0490 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D dqs_3803 3-polyprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D dqs_3966 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D dqs_0797 ubiquinone biosynthesis hydroxylase family protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D dqs_2749 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D dqs_3031 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D dqs_4092 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D dqs_0171 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D dqs_2897 ubiquinone biosynthesis protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D dqs_3756 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D dqs_1706 NAD(P)H dehydrogenase, quinone 1 K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D dqs_1600 NAD(P)H quinone oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D dqs_3296 tryptophan repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D dqs_3103 trp repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D dqs_3659 tryptophan repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D dqs_1308 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:aoa00900] D dqs_1313 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D dqs_2058 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D dqs_1832 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D dqs_0831 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D dqs_1833 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D dqs_0999 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D dqs_1317 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_3966 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D dqs_1314 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D dqs_1115 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D dqs_2060 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D dqs_1640 putative metalloprotease K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:aoa00906] D dqs_2039 putative phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:aoa00903] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2491 putative acetyl esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:aoa00907] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0476 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D dqs_3199 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D dqs_0480 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D dqs_2975 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:aoa00523] D dqs_2030 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D dqs_2032 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D dqs_2029 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D dqs_2031 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics [PATH:aoa01055] D dqs_0678 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D dqs_2032 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:aoa00332] D dqs_3302 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D dqs_3355 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:aoa00261] D dqs_0678 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D dqs_0439 putative sulfate adenylyltransferase subunit 1/adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D dqs_0440 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D dqs_3247 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D dqs_1150 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D dqs_1206 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D dqs_2737 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:aoa00521] D dqs_2443 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_1949 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_2913 putative phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D dqs_2972 putative inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D dqs_2176 putative inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D dqs_2030 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D dqs_2032 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D dqs_2029 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D dqs_2031 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D dqs_2443 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D dqs_1949 putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:aoa00525] D dqs_2030 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D dqs_2032 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:aoa00401] D dqs_1178 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D dqs_3485 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_1177 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_1735 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D dqs_3463 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D dqs_3462 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D dqs_1749 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D dqs_1750 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D dqs_4058 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D dqs_2262 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D dqs_1692 enoyl-acyl carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:aoa00998] D dqs_1751 acyl carrier protein K02078 acpP; acyl carrier protein D dqs_0275 hypothetical protein K02078 acpP; acyl carrier protein D dqs_0298 acyl carrier protein K02078 acpP; acyl carrier protein D dqs_3389 hypothetical protein K02078 acpP; acyl carrier protein D dqs_2833 putative phosphoenolpyruvate phosphomutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104] D dqs_2834 phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] C 00999 Biosynthesis of various plant secondary metabolites [PATH:aoa00999] D dqs_0658 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D dqs_0776 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:aoa00362] D dqs_2115 putative 2-oxo-1 2-dihydroquinoline 8-monooxygenase reductase subunit K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D dqs_0480 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D dqs_0323 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D dqs_3193 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D dqs_2588 putative phenol hydrolase subunit P0 K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D dqs_1995 phenol 2-monooxygenase K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D dqs_2587 phenol hydroxylase subunit P1 K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D dqs_1996 phenol 2-monooxygenase subunit p1 K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D dqs_2586 phenol hydrolase subunit P2 K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D dqs_1997 phenol 2-monooxygenase subunit p2 K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D dqs_2585 phenol hydroxylase subunit P3 K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D dqs_1998 phenol 2-monooxygenase subunit p3 K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D dqs_2584 phenol hydroxylase subunit P4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D dqs_1999 phenol 2-monooxygenase subunit p4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D dqs_2000 phenol 2-monooxygenase K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D dqs_2583 phenol hydroxylase subunit P5 K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D dqs_2582 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_1994 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_2011 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_2123 2-hydroxy-muconic semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D dqs_2129 MhpD protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D dqs_2578 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D dqs_2006 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D dqs_2575 4-hydroxy-2-ketovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D dqs_2010 4-hydroxy-2-ketovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D dqs_2127 4-hydroxy-2-ketovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D dqs_2576 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2009 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2128 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2579 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D dqs_2005 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D dqs_2573 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D dqs_0140 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D dqs_2008 oxaloacetate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D dqs_2574 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D dqs_2007 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D dqs_4101 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D dqs_2680 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D dqs_2695 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D dqs_2679 protocatechuate 4,5-dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D dqs_2694 protocatechuate 4,5-dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D dqs_2693 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D dqs_2696 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D dqs_2701 hypothetical protein K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D dqs_2699 4-oxalomesaconate hydratase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83] D dqs_2698 hypothetical protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D dqs_2686 putidaredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D dqs_2166 Fdx2 protein K04755 fdx; ferredoxin, 2Fe-2S D dqs_2685 ferrodoxin K04755 fdx; ferredoxin, 2Fe-2S D dqs_2592 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D dqs_2566 salicylate hydroxylase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24] D dqs_3178 thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D dqs_2648 thiesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D dqs_2084 4-hydroxybenzoyl CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D dqs_3186 benzoate-coa ligase K04110 badA; benzoate-CoA ligase [EC:6.2.1.25] D dqs_0476 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D dqs_0479 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D dqs_2079 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D dqs_2085 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_1136 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D dqs_0314 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D dqs_3174 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_3192 putative benzoyl-CoA oxygenase component A K15511 boxA; benzoyl-CoA 2,3-epoxidase subunit A [EC:1.14.13.208] D dqs_3191 benzoyl-CoA oxygenase component B K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208] D dqs_3188 aldehyde dehydrogenase K15514 boxD; 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase [EC:1.2.1.77] D dqs_3190 benzoyl-CoA-dihydrodiol lyase K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] C 00627 Aminobenzoate degradation [PATH:aoa00627] D dqs_2487 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D dqs_2111 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D dqs_3342 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D dqs_3186 benzoate-coa ligase K04110 badA; benzoate-CoA ligase [EC:6.2.1.25] D dqs_2614 L-lactate dehydrogenase K15054 mdlB; (S)-mandelate dehydrogenase [EC:1.1.99.31] D dqs_2617 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D dqs_3966 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D dqs_2151 putative acetyl-coenzyme a synthetase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32] D dqs_2089 salicylyl-CoA 5-hydroxylase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40] D dqs_2671 putative ferredoxin K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component D dqs_2674 naphthalene 1,2-dioxygenase/ferredoxin--NAD(+) reductase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7] D dqs_2680 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D dqs_2695 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D dqs_2679 protocatechuate 4,5-dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D dqs_2694 protocatechuate 4,5-dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D dqs_2693 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D dqs_2696 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0812 glutamine synthetase K20712 glnA; 3-(hydroxyamino)phenol mutase [EC:5.4.4.3] C 00364 Fluorobenzoate degradation [PATH:aoa00364] D dqs_2115 putative 2-oxo-1 2-dihydroquinoline 8-monooxygenase reductase subunit K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D dqs_2470 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D dqs_2793 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:aoa00625] D dqs_0121 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D dqs_3766 alcohol dehydrogenase classIII K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D dqs_0229 putative aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_2991 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D dqs_0550 Mo-protein dinitrogenase reductase subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D dqs_0548 putative nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D dqs_0549 nitrogenase molybdenum-iron protein subunit alpha K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D dqs_3110 putative quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D dqs_4009 putative quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D dqs_0056 haloacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D dqs_0230 haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:aoa00361] D dqs_2588 putative phenol hydrolase subunit P0 K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D dqs_1995 phenol 2-monooxygenase K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D dqs_2587 phenol hydroxylase subunit P1 K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D dqs_1996 phenol 2-monooxygenase subunit p1 K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D dqs_2586 phenol hydrolase subunit P2 K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D dqs_1997 phenol 2-monooxygenase subunit p2 K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D dqs_2585 phenol hydroxylase subunit P3 K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D dqs_1998 phenol 2-monooxygenase subunit p3 K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D dqs_2584 phenol hydroxylase subunit P4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D dqs_1999 phenol 2-monooxygenase subunit p4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D dqs_2000 phenol 2-monooxygenase K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D dqs_2583 phenol hydroxylase subunit P5 K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D dqs_2470 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D dqs_2793 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D dqs_2582 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_1994 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_2011 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_0230 haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D dqs_0056 haloacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00623 Toluene degradation [PATH:aoa00623] D dqs_2588 putative phenol hydrolase subunit P0 K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D dqs_1995 phenol 2-monooxygenase K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D dqs_2587 phenol hydroxylase subunit P1 K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D dqs_1996 phenol 2-monooxygenase subunit p1 K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D dqs_2586 phenol hydrolase subunit P2 K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D dqs_1997 phenol 2-monooxygenase subunit p2 K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D dqs_2585 phenol hydroxylase subunit P3 K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D dqs_1998 phenol 2-monooxygenase subunit p3 K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D dqs_2584 phenol hydroxylase subunit P4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D dqs_1999 phenol 2-monooxygenase subunit p4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D dqs_2000 phenol 2-monooxygenase K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D dqs_2583 phenol hydroxylase subunit P5 K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D dqs_2762 putative ferredoxin subunit of nitrite reductase K15762 tmoC; toluene monooxygenase system ferredoxin subunit D dqs_2617 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D dqs_2470 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D dqs_2793 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:aoa00622] D dqs_2617 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D dqs_2115 putative 2-oxo-1 2-dihydroquinoline 8-monooxygenase reductase subunit K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D dqs_2582 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_1994 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_2011 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_2123 2-hydroxy-muconic semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D dqs_2579 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D dqs_2005 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D dqs_2573 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D dqs_0140 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D dqs_2008 oxaloacetate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D dqs_2574 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D dqs_2007 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D dqs_2578 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D dqs_2006 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D dqs_2575 4-hydroxy-2-ketovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D dqs_2010 4-hydroxy-2-ketovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D dqs_2127 4-hydroxy-2-ketovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D dqs_2576 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2009 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2128 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2129 MhpD protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation [PATH:aoa00633] D dqs_2814 glycerol trinitrate reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D dqs_3939 ferredoxin hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D dqs_3938 ferredoxin hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D dqs_3960 ferredoxin hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D dqs_3959 ferredoxin hydrogenase small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D dqs_3071 hypothetical protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D dqs_2671 putative ferredoxin K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component D dqs_2674 naphthalene 1,2-dioxygenase/ferredoxin--NAD(+) reductase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7] C 00642 Ethylbenzene degradation [PATH:aoa00642] D dqs_2671 putative ferredoxin K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component D dqs_2674 naphthalene 1,2-dioxygenase/ferredoxin--NAD(+) reductase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7] D dqs_0480 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:aoa00643] D dqs_2381 succinate semialdehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D dqs_3156 succinate semialdehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D dqs_3821 maleylpyruvate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D dqs_3823 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D dqs_2487 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D dqs_2111 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D dqs_2582 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_1994 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_2011 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D dqs_2123 2-hydroxy-muconic semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] C 00791 Atrazine degradation [PATH:aoa00791] D dqs_1232 isochorismatase family protein K23359 biuH; biuret amidohydrolase [EC:3.5.1.84] D dqs_3647 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D dqs_3648 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D dqs_3650 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:aoa00930] D dqs_2471 putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D dqs_2491 putative acetyl esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D dqs_2082 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0860 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D dqs_0476 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation D dqs_0043 hypothetical protein K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41] C 00621 Dioxin degradation [PATH:aoa00621] D dqs_2573 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D dqs_0140 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D dqs_2008 oxaloacetate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D dqs_2574 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D dqs_2007 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D dqs_2129 MhpD protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D dqs_2578 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D dqs_2006 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D dqs_2575 4-hydroxy-2-ketovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D dqs_2010 4-hydroxy-2-ketovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D dqs_2127 4-hydroxy-2-ketovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D dqs_2576 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2009 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D dqs_2128 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00626 Naphthalene degradation [PATH:aoa00626] D dqs_2671 putative ferredoxin K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component D dqs_2674 naphthalene 1,2-dioxygenase/ferredoxin--NAD(+) reductase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7] D dqs_2673 putative ring hydroxylating large subunit K18242 nagG; salicylate 5-hydroxylase large subunit [EC:1.14.13.172] D dqs_2672 putative ring hydroxylating subunit beta K18243 nagH; salicylate 5-hydroxylase small subunit [EC:1.14.13.172] D dqs_0121 putative alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D dqs_3766 alcohol dehydrogenase classIII K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation [PATH:aoa00624] D dqs_2671 putative ferredoxin K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component D dqs_2674 naphthalene 1,2-dioxygenase/ferredoxin--NAD(+) reductase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7] D dqs_2680 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D dqs_2695 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D dqs_2679 protocatechuate 4,5-dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D dqs_2694 protocatechuate 4,5-dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:aoa03020] D dqs_3563 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D dqs_3562 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D dqs_3530 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D dqs_4095 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:aoa03010] D dqs_1180 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D dqs_2064 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D dqs_3550 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D dqs_3531 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D dqs_3539 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D dqs_0787 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D dqs_3560 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D dqs_3542 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D dqs_2894 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D dqs_3557 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D dqs_3532 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D dqs_3561 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D dqs_3533 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D dqs_3543 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D dqs_2236 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D dqs_3038 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D dqs_3547 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D dqs_0789 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D dqs_3552 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D dqs_2323 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D dqs_3362 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D dqs_3566 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D dqs_3553 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D dqs_3556 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D dqs_3555 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D dqs_3544 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D dqs_3541 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D dqs_3564 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D dqs_0790 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D dqs_3565 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D dqs_3567 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D dqs_2895 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D dqs_3546 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D dqs_3537 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D dqs_3549 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D dqs_3529 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D dqs_3540 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D dqs_3041 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D dqs_1191 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D dqs_3299 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D dqs_3551 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D dqs_3554 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D dqs_3545 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D dqs_0828 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D dqs_3300 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D dqs_1247 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D dqs_3548 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D dqs_3538 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D dqs_1644 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D dqs_1746 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D dqs_1246 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D dqs_4135 putative ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D dqs_1190 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D dqs_3534 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D dqs_0198 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_0792 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_1403 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_3332 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_0201 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_3329 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_1406 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_0795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_0202 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D dqs_0796 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D dqs_1407 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D dqs_3328 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:aoa00970] D dqs_0200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_0794 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_1133 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_1405 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_1130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_1503 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_3330 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_3319 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D dqs_0197 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D dqs_2232 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D dqs_1470 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D dqs_1733 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D dqs_1734 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D dqs_1132 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D dqs_1135 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D dqs_1776 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D dqs_0830 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D dqs_1134 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D dqs_1131 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D dqs_1777 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D dqs_3573 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D dqs_3934 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D dqs_1775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D dqs_2231 tRNA-His K14226 tRNA-His; tRNA His D dqs_0793 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D dqs_1404 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D dqs_0199 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D dqs_3331 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D dqs_1519 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_1012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_2024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_0980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_1781 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_1011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_0422 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D dqs_0640 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D dqs_2750 tRNA-Met K14230 tRNA-Met; tRNA Met D dqs_0846 tRNA-Met K14230 tRNA-Met; tRNA Met D dqs_1054 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D dqs_1116 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D dqs_1196 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D dqs_2233 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D dqs_2421 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D dqs_1211 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D dqs_1448 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D dqs_3246 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D dqs_2821 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D dqs_1305 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D dqs_3572 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D dqs_3570 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D dqs_3574 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D dqs_2195 tRNA-Val K14237 tRNA-Val; tRNA Val D dqs_2197 tRNA-Val K14237 tRNA-Val; tRNA Val D dqs_1187 tRNA-Val K14237 tRNA-Val; tRNA Val D dqs_2196 tRNA-Val K14237 tRNA-Val; tRNA Val D dqs_1602 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D dqs_0181 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D dqs_0179 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D dqs_0182 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D dqs_0907 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D dqs_2915 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D dqs_3376 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D dqs_0855 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D dqs_0856 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D dqs_1188 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D dqs_1491 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D dqs_1168 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D dqs_3340 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D dqs_0110 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D dqs_3047 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D dqs_3352 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D dqs_1320 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D dqs_1610 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D dqs_0392 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D dqs_2900 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D dqs_1000 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D dqs_1192 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D dqs_1193 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D dqs_2891 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D dqs_3840 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:aoa03060] D dqs_3536 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D dqs_3569 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D dqs_1518 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D dqs_0975 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D dqs_0974 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D dqs_0976 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D dqs_4132 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D dqs_0964 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D dqs_2951 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D dqs_3369 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D dqs_0841 signal recognition particle-docing protein FtsY K03110 ftsY; fused signal recognition particle receptor D dqs_2486 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D dqs_3478 twin arginine translocase A K03116 tatA; sec-independent protein translocase protein TatA D dqs_3477 putative Sec-independent protein translocase K03117 tatB; sec-independent protein translocase protein TatB D dqs_3476 Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC D dqs_1765 LepB protein K03100 lepB; signal peptidase I [EC:3.4.21.89] D dqs_1319 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:aoa04122] D dqs_0562 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2171 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2172 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2502 putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D dqs_2889 putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D dqs_3059 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D dqs_2907 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D dqs_1687 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D dqs_1730 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D dqs_1686 molybdopterin converting factor subunit K03636 moaD; sulfur-carrier protein D dqs_3068 hypothetical protein K03636 moaD; sulfur-carrier protein D dqs_2430 hypothetical protein K03636 moaD; sulfur-carrier protein D dqs_2943 adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D dqs_3061 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D dqs_2927 molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D dqs_4113 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:aoa03018] D dqs_2899 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D dqs_1738 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D dqs_2277 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D dqs_2235 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D dqs_3665 putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D dqs_1109 putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D dqs_1013 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D dqs_2254 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D dqs_3456 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D dqs_1137 transcription termination factor Rho K03628 rho; transcription termination factor Rho D dqs_1171 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D dqs_2496 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1048 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1338 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1004 RNA-binding protein Hfq K03666 hfq; host factor-I protein D dqs_1839 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D dqs_3272 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:aoa03030] D dqs_4091 putative DNA-directed polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2335 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2554 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_0077 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2180 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_3345 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D dqs_1031 DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D dqs_1719 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D dqs_3354 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D dqs_3045 DNA-directed DNA polymerase K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D dqs_0002 DNA-directed DNA polymerase K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D dqs_0791 DnaB protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D dqs_3363 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D dqs_3524 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D dqs_2181 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D dqs_2050 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D dqs_3743 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D dqs_2156 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:aoa03410] D dqs_1559 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D dqs_4119 uracil-DNA glycosylase K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-] D dqs_3964 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D dqs_0834 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D dqs_1983 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D dqs_3764 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D dqs_1863 DNA-directed DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D dqs_3809 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D dqs_3020 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D dqs_3743 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D dqs_1628 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D dqs_2156 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:aoa03420] D dqs_1823 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D dqs_3526 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D dqs_0098 putative excinuclease ABC subunit K03701 uvrA; excinuclease ABC subunit A D dqs_1736 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D dqs_1773 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D dqs_3350 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D dqs_0357 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D dqs_3743 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D dqs_2156 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:aoa03430] D dqs_2178 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D dqs_3258 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D dqs_3350 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D dqs_0357 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D dqs_1590 exodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D dqs_1315 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D dqs_1628 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D dqs_3524 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D dqs_3345 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D dqs_0002 DNA-directed DNA polymerase K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D dqs_1031 DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D dqs_3354 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D dqs_1719 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D dqs_4091 putative DNA-directed polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2335 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2554 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_0077 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2180 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_3045 DNA-directed DNA polymerase K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D dqs_2156 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:aoa03440] D dqs_1628 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D dqs_3524 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D dqs_1769 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D dqs_1033 recombination protein RecR K06187 recR; recombination protein RecR D dqs_0517 recombinase A K03553 recA; recombination protein RecA D dqs_3743 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D dqs_0670 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D dqs_0669 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D dqs_0641 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D dqs_0488 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D dqs_3995 ATP-dependent exoDNAse subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D dqs_4002 DNA helicase K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D dqs_3994 DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D dqs_3345 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D dqs_0002 DNA-directed DNA polymerase K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D dqs_1031 DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D dqs_3354 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D dqs_1719 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D dqs_4091 putative DNA-directed polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2335 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2554 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_0077 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2180 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_3045 DNA-directed DNA polymerase K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D dqs_4121 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D dqs_0788 putative primosomal replication protein K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining [PATH:aoa03450] D dqs_1890 hypothetical protein K10979 ku; DNA end-binding protein Ku D dqs_1891 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:aoa03250] D dqs_1165 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:aoa02010] D dqs_1457 putative sulfate transport system substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D dqs_2406 putative sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D dqs_2493 putative periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D dqs_1456 sulfate transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D dqs_1455 putative sulfate transport system permease K02047 cysW; sulfate/thiosulfate transport system permease protein D dqs_1454 putative sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D dqs_3984 tungstate ABC transporter permease K05772 tupA; tungstate transport system substrate-binding protein D dqs_3064 tungstate permease K05773 tupB; tungstate transport system permease protein D dqs_3063 tungstate ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D dqs_2625 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D dqs_1016 nitrate transport system periplasmic-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D dqs_2626 nitrate ABC transporter, permease K15577 nrtB; nitrate/nitrite transport system permease protein D dqs_1017 putative nitrate transport system permease K15577 nrtB; nitrate/nitrite transport system permease protein D dqs_2627 nitrate ABC transporter, ATP-binding protein C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D dqs_1018 putative nitrate transport system ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D dqs_2530 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D dqs_2532 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D dqs_2529 ABC-type transporter membrane permease K15554 ssuC; sulfonate transport system permease protein D dqs_2528 ABC transporter-like protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D dqs_3988 putative molybdate transport system periplasmic-binding protein K02020 modA; molybdate transport system substrate-binding protein D dqs_3987 putative molybdenum transport system permease K02018 modB; molybdate transport system permease protein D dqs_3986 putative molybdenum transport system ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D dqs_2338 putative iron transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D dqs_3977 putative ferric transport system periplasmic-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D dqs_2339 iron (III) transport system permease K02011 afuB; iron(III) transport system permease protein D dqs_3979 putative ferrric transport system permease K02011 afuB; iron(III) transport system permease protein D dqs_2340 putative iron (III) transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D dqs_3978 Fe3+-transporting ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D dqs_0577 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D dqs_0880 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D dqs_1387 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D dqs_0878 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D dqs_1843 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D dqs_1389 putative ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D dqs_0877 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D dqs_1841 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D dqs_0881 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D dqs_1388 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D dqs_0876 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D dqs_1842 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D dqs_0218 lipoprotein K07335 bmpA; basic membrane protein A and related proteins D dqs_2348 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D dqs_2349 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D dqs_2347 hypothetical protein K23537 nupA; general nucleoside transport system ATP-binding protein D dqs_1513 phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein D dqs_0351 putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein D dqs_1514 phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D dqs_1515 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D dqs_1516 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D dqs_0453 putative glutamine-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D dqs_0451 putative glutamine transport permease K10002 gltK; glutamate/aspartate transport system permease protein D dqs_0452 putative glutamine transport permease K10003 gltJ; glutamate/aspartate transport system permease protein D dqs_0450 glutamine transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D dqs_1452 putative amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D dqs_1451 putative amino acid permease K09970 aapQ; general L-amino acid transport system permease protein D dqs_1450 putative amino acid permease K09971 aapM; general L-amino acid transport system permease protein D dqs_3184 putative leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_1496 extracellular ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_2653 putative leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3586 branched chain amino acid ABC transporter periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_0129 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3880 leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3881 leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_1240 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_2145 putative Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_0324 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3970 putative leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3183 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_2656 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_3588 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_0130 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_3882 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_1236 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_2146 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_0325 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_3972 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_2655 branched-chain amino acid ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_2147 branched-chain amino acid ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0326 branched-chain amino acid ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0131 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3883 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_1237 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3971 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3182 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3587 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3181 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_3589 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0127 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_3884 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_1238 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0128 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_3885 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_1239 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_0327 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_2148 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_3180 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_2654 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_3585 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_0743 putative aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein D dqs_0744 ABC transporter permease K11960 urtB; urea transport system permease protein D dqs_0745 ABC transporter membrane protein K11961 urtC; urea transport system permease protein D dqs_0746 ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D dqs_0747 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D dqs_1330 putative periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D dqs_1332 putative manganese transport system permease K11708 troC; manganese/zinc/iron transport system permease protein D dqs_1333 putative manganese transport system permease K11709 troD; manganese/zinc/iron transport system permease protein D dqs_1331 putative manganese transport system ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D dqs_2353 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D dqs_2354 putative cobalt transport system permease K02008 cbiQ; cobalt/nickel transport system permease protein D dqs_2355 putative cobalt transport system ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D dqs_2351 putative cobalt transport system periplasmic-binding protein K10094 cbiK; nickel transport protein D dqs_2352 hypothetical protein K16915 cbiL; nickel transport protein D dqs_3740 putative ABC polysaccharide exporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D dqs_3739 putative polysaccharide export transport system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D dqs_0361 ABC transporter permease NodJ K09694 nodJ; lipooligosaccharide transport system permease protein D dqs_0372 ABC transporter ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D dqs_1632 putative lipoprotein transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D dqs_1633 lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D dqs_4076 heme exporter protein D K02196 ccmD; heme exporter protein D D dqs_4077 heme exporter protein C K02195 ccmC; heme exporter protein C D dqs_4078 heme exporter protein B K02194 ccmB; heme exporter protein B D dqs_4079 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D dqs_3043 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D dqs_3042 integral membrane protein K11720 lptG; lipopolysaccharide export system permease protein D dqs_0515 ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D dqs_3239 putative copper transport system permease K19341 nosY; Cu-processing system permease protein D dqs_3240 putative copper transport system ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein D dqs_0843 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D dqs_0842 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D dqs_2446 Lipid A export ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D dqs_3715 lipid A export ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D dqs_0464 composite transport ATP-binding permase K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D dqs_0729 ABC transporter permease and ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D dqs_0715 toxin secretion ABC transporter permease and ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D dqs_0680 ABC transporter ATP-binding protein/permease K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D dqs_2442 ABC transporter, ATP-binding cassette K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:aoa02060] D dqs_3933 putative phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D dqs_3932 putative phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D dqs_3931 putative IIA component of sugar transport PTS system K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D dqs_0512 protein-Npi-phosphohistidine-sugar phosphotransferase K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:aoa03070] D dqs_0921 putative outer membrane efflux protein K12340 tolC; outer membrane protein D dqs_2219 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D dqs_2225 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D dqs_2217 hypothetical protein K02456 gspG; general secretion pathway protein G D dqs_2218 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D dqs_2226 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D dqs_2435 general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D dqs_2224 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D dqs_0975 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D dqs_0974 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D dqs_3569 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D dqs_1518 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D dqs_3536 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D dqs_0976 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D dqs_4132 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D dqs_0964 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D dqs_0841 signal recognition particle-docing protein FtsY K03110 ftsY; fused signal recognition particle receptor D dqs_2951 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D dqs_3369 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D dqs_3478 twin arginine translocase A K03116 tatA; sec-independent protein translocase protein TatA D dqs_3477 putative Sec-independent protein translocase K03117 tatB; sec-independent protein translocase protein TatB D dqs_3476 Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC D dqs_1427 Vgr related protein K11904 vgrG; type VI secretion system secreted protein VgrG D dqs_3613 Vgr-related protein K11904 vgrG; type VI secretion system secreted protein VgrG D dqs_4020 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D dqs_1425 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D dqs_4041 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D dqs_4042 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D dqs_1420 hypothetical protein K11906 vasD; type VI secretion system protein VasD D dqs_4037 hypothetical protein K11906 vasD; type VI secretion system protein VasD D dqs_1422 hypothetical protein K11891 impL; type VI secretion system protein ImpL D dqs_4034 ImcF-like protein K11891 impL; type VI secretion system protein ImpL D dqs_1418 hypothetical protein K11892 impK; type VI secretion system protein ImpK D dqs_4035 hypothetical protein K11892 impK; type VI secretion system protein ImpK D dqs_4047 putative ATP-dependent Clp protease, ATP-binding subunit ClpB K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:aoa02020] D dqs_0174 phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D dqs_0173 phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D dqs_2555 transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D dqs_3999 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D dqs_1513 phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein D dqs_0351 putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein D dqs_1858 osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D dqs_1859 osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D dqs_1759 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_1913 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_0102 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_3819 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_0772 sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D dqs_0773 DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D dqs_2463 membrane fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system D dqs_2464 RND efflux transporter permease K07788 mdtB; multidrug efflux pump D dqs_2465 RND efflux transporter permease K07789 mdtC; multidrug efflux pump D dqs_3085 two component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D dqs_3086 two component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D dqs_3089 cation efflux transmembrane protein K07798 cusB; membrane fusion protein, copper/silver efflux system D dqs_3090 putative cation efflux system protein K07787 cusA; copper/silver efflux system protein D dqs_1570 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D dqs_1571 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D dqs_2690 putative flagellin K02406 fliC; flagellin D dqs_2828 flagellin K02406 fliC; flagellin D dqs_2839 flagellin K02406 fliC; flagellin D dqs_1218 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D dqs_1572 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D dqs_1219 flagellar motor protein K02556 motA; chemotaxis protein MotA D dqs_2934 two component sensor protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D dqs_2935 two component system transcriptional regulatory protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D dqs_2514 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D dqs_2524 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D dqs_2525 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D dqs_3433 putative cytochrome aa3 oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D dqs_0001 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D dqs_1669 putative citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D dqs_1091 putative alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D dqs_1092 alginate biosynthesis regulatory protein AlgR K08083 algR; two-component system, LytTR family, response regulator AlgR D dqs_3408 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D dqs_0717 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D dqs_3114 putative two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D dqs_3106 putative two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D dqs_1627 putative two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D dqs_3115 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D dqs_3105 two-component response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D dqs_0579 DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D dqs_1626 putative two-component response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D dqs_2066 PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D dqs_1483 PII-like signal transmitter protein GlnB K04751 glnB; nitrogen regulatory protein P-II 1 D dqs_3150 PII-like signal transmitter protein GlnY K04751 glnB; nitrogen regulatory protein P-II 1 D dqs_0810 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D dqs_0809 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D dqs_3146 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D dqs_4126 nitrogen regulation protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D dqs_4125 nitrogen assimilation regulatory protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D dqs_0529 nif-specific regulatory protein K02584 nifA; Nif-specific regulatory protein D dqs_2621 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein D dqs_1992 transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2070 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D dqs_2069 transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D dqs_0458 transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D dqs_3496 two component system sensor protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D dqs_3495 two component system response regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D dqs_0514 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D dqs_1939 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D dqs_3494 pilin domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D dqs_2903 putative two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D dqs_2905 putative two component transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D dqs_3959 ferredoxin hydrogenase small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D dqs_3960 ferredoxin hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D dqs_3962 hydrogen uptake histidine-kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3] D dqs_3957 hydrogenase transcriptional regulatory protein K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA D dqs_3938 ferredoxin hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D dqs_3939 ferredoxin hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D dqs_3940 Ni/Fe-hydrogenase, B-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D dqs_1578 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D dqs_0414 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D dqs_3836 putative methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_0101 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0138 putative dipeptide chemoreceptor K03406 mcp; methyl-accepting chemotaxis protein D dqs_0139 putative aromatic hydrocarbon chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_1022 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_1220 putative aspartate chemoreceptor protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0417 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0420 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0555 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0650 putative methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_1577 putative serine chemoreceptor protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_1580 methyl accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_2705 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_2401 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_4080 putative aerotaxis receptor K03776 aer; aerotaxis receptor D dqs_2332 aerotaxis receptor K03776 aer; aerotaxis receptor D dqs_1492 putative aerotaxis receptor protein K03776 aer; aerotaxis receptor D dqs_1576 positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW D dqs_0416 positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW D dqs_1575 chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_1585 chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_0418 putative chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_1574 putative chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_1583 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_2184 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_0421 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_4089 putative two component transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_1579 protein glutamate-methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D dqs_0413 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D dqs_1581 chemotaxis protein CheV-like K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D dqs_1582 chemotaxis protein CheV-like K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D dqs_3599 pilus biogenesis protein K02660 pilJ; twitching motility protein PilJ D dqs_3598 pilus biogenesis protein K02659 pilI; twitching motility protein PilI D dqs_3600 putative pilus biogenese protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D dqs_3596 pilus protein K02657 pilG; twitching motility two-component system response regulator PilG D dqs_3597 pilus protein K02658 pilH; twitching motility two-component system response regulator PilH D dqs_1614 polar differentiation response regulator K11443 divK; two-component system, cell cycle response regulator DivK D dqs_0990 two-component sensor kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3] D dqs_0989 two-component response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR D dqs_0991 c4-dicarboxylate-binding periplasmic protein K11688 dctP; C4-dicarboxylate-binding protein DctP D dqs_0992 C4-dicarboxylate ABC transporter substrate-binding protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D dqs_0993 TRAP dicarboxylate transporter subunit DctM K11690 dctM; C4-dicarboxylate transporter, DctM subunit D dqs_0256 TRAP-type C4-dicarboxylate transport system large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D dqs_2676 TRAP-type C4 dicarboxylate transport system large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D dqs_2818 putative sensor histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D dqs_2850 putative sensory box sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D dqs_2849 sigma-54 dependent response regulator K10943 flrC; two-component system, response regulator FlrC D dqs_0459 sensor histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3] D dqs_0450 glutamine transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D dqs_0451 putative glutamine transport permease K10002 gltK; glutamate/aspartate transport system permease protein D dqs_0452 putative glutamine transport permease K10003 gltJ; glutamate/aspartate transport system permease protein D dqs_0453 putative glutamine-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D dqs_0449 periplasmic L-asparaginase II K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D dqs_3831 response regulator K13815 rpfG; two-component system, response regulator RpfG D dqs_1486 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D dqs_1034 ubiquinol-cytochrome c reductase iron-sulfur protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D dqs_1350 ubiquinol-cytochrome C reductase iron-sulfur protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D dqs_1035 ubiquinol-cytochrome c reductase cytochrome b protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D dqs_1036 putative ubiquinol-cytochrome c reductase cytochrome c1 protein K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D dqs_3643 cytochrome c-552 K08738 CYC; cytochrome c D dqs_0114 hypothetical protein K08738 CYC; cytochrome c D dqs_3077 cytochrome c-552 precourser K08738 CYC; cytochrome c D dqs_3104 hypothetical protein K08738 CYC; cytochrome c D dqs_1462 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D dqs_1463 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D dqs_1464 Cbb3-type cytochrome oxidase subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D dqs_1465 cytochrome c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D dqs_1921 cyanide insensitive terminal oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D dqs_1347 cytochrome bd type terminal oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D dqs_1922 cyanide insensitive terminal oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D dqs_1346 cytochrome bd type terminal oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D dqs_0921 putative outer membrane efflux protein K12340 tolC; outer membrane protein D dqs_2375 putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D dqs_3422 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D dqs_1737 PtpA protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D dqs_3417 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D dqs_2369 putative endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D dqs_2670 RNA polymerase ECF-subfamily sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D dqs_2669 putative transmembrane sensor K07165 fecR; transmembrane sensor D dqs_2492 putative sensor kinase/response regulator hybrid protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D dqs_3581 putative virulence regulator protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D dqs_2877 putative negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D dqs_1034 ubiquinol-cytochrome c reductase iron-sulfur protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D dqs_1350 ubiquinol-cytochrome C reductase iron-sulfur protein K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:aoa02024] D dqs_1004 RNA-binding protein Hfq K03666 hfq; host factor-I protein D dqs_3463 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D dqs_3462 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D dqs_1819 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D dqs_2923 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D dqs_2903 putative two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D dqs_2905 putative two component transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D dqs_1570 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D dqs_1571 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D dqs_2935 two component system transcriptional regulatory protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D dqs_1370 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D dqs_3184 putative leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_1496 extracellular ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_2653 putative leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3586 branched chain amino acid ABC transporter periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_0129 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3880 leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3881 leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_1240 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_2145 putative Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_0324 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3970 putative leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3183 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_2656 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_3588 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_0130 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_3882 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_1236 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_2146 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_0325 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_3972 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_2655 branched-chain amino acid ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_2147 branched-chain amino acid ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0326 branched-chain amino acid ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0131 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3883 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_1237 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3971 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3182 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3587 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3181 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_3589 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0127 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_3884 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_1238 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0128 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_3885 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_1239 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_0327 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_2148 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_3180 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_2654 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_3585 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_2714 hypothetical protein K20276 bapA; large repetitive protein D dqs_3304 putative long chain fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_3590 putative Acetyl-coenzyme A synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_1141 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_3831 response regulator K13815 rpfG; two-component system, response regulator RpfG D dqs_1486 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D dqs_2942 AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D dqs_0260 RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system D dqs_3052 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D dqs_0679 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D dqs_0232 putative dipeptide transport system periplasmic-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D dqs_1694 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D dqs_1695 putative oligopeptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D dqs_0233 putative dipeptide transport system permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D dqs_1696 oligopeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D dqs_0234 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D dqs_0235 putative dipeptide transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D dqs_2187 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D dqs_4132 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D dqs_1446 hypothetical protein K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19] D dqs_3569 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D dqs_1518 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D dqs_3536 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D dqs_0976 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D dqs_0964 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D dqs_0841 signal recognition particle-docing protein FtsY K03110 ftsY; fused signal recognition particle receptor D dqs_2951 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D dqs_3369 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:aoa02030] D dqs_3836 putative methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_0101 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0138 putative dipeptide chemoreceptor K03406 mcp; methyl-accepting chemotaxis protein D dqs_0139 putative aromatic hydrocarbon chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_1022 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_1220 putative aspartate chemoreceptor protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0417 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0420 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0555 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0650 putative methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_1577 putative serine chemoreceptor protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_1580 methyl accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_2705 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_2401 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_4080 putative aerotaxis receptor K03776 aer; aerotaxis receptor D dqs_2332 aerotaxis receptor K03776 aer; aerotaxis receptor D dqs_1492 putative aerotaxis receptor protein K03776 aer; aerotaxis receptor D dqs_1575 chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_1585 chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_0418 putative chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_1576 positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW D dqs_0416 positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW D dqs_1574 putative chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_1583 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_2184 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_0421 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_4089 putative two component transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_1584 chemotaxis regulator CheZ K03414 cheZ; chemotaxis protein CheZ D dqs_1579 protein glutamate-methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D dqs_0413 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D dqs_1581 chemotaxis protein CheV-like K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D dqs_1582 chemotaxis protein CheV-like K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D dqs_0415 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D dqs_1578 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D dqs_0414 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D dqs_2852 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D dqs_2858 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D dqs_2859 flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D dqs_1572 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D dqs_1219 flagellar motor protein K02556 motA; chemotaxis protein MotA D dqs_1573 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D dqs_1221 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:aoa02040] D dqs_2848 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D dqs_2851 flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D dqs_2852 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D dqs_2853 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D dqs_2854 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D dqs_2855 putative flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D dqs_2856 putative flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D dqs_2857 putative flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D dqs_2858 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D dqs_2859 flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D dqs_2860 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D dqs_2861 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D dqs_2862 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D dqs_2863 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D dqs_1215 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D dqs_1214 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D dqs_2876 chaperon for flagellar basal body P-ring formation K02386 flgA; flagellar basal body P-ring formation protein FlgA D dqs_2875 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D dqs_2874 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D dqs_2873 basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D dqs_2872 FlgE protein K02390 flgE; flagellar hook protein FlgE D dqs_2871 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D dqs_2870 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D dqs_2869 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D dqs_2868 flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D dqs_2867 peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ D dqs_2866 flagellar hook-filament junction protein 1 K02396 flgK; flagellar hook-associated protein 1 D dqs_2865 flagellar hook-filament junction protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D dqs_2690 putative flagellin K02406 fliC; flagellin D dqs_2828 flagellin K02406 fliC; flagellin D dqs_2839 flagellin K02406 fliC; flagellin D dqs_2841 flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2 D dqs_2842 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D dqs_2843 flagellar-like protein FliT K02423 fliT; flagellar protein FliT D dqs_1572 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D dqs_1219 flagellar motor protein K02556 motA; chemotaxis protein MotA D dqs_1573 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D dqs_1221 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D dqs_2877 putative negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D dqs_2878 putative flagellar synthesis chaperone K02399 flgN; flagellar biosynthesis protein FlgN D dqs_3364 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D dqs_1570 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D dqs_1571 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D dqs_0514 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D dqs_1939 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D dqs_2849 sigma-54 dependent response regulator K10943 flrC; two-component system, response regulator FlrC D dqs_1218 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D dqs_2277 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:aoa04980] D dqs_2916 hypothetical protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D dqs_0755 arginine/ornithine transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-] D dqs_0754 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D dqs_3877 B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:aoa01501] D dqs_4118 putative AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D dqs_0770 putative beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D dqs_1772 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D dqs_3267 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_0258 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_2713 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_3266 RND efflux transporter permease K18138 acrB; multidrug efflux pump D dqs_0259 RND efflux transporter permease K18138 acrB; multidrug efflux pump D dqs_0260 RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system D dqs_3052 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D dqs_0679 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D dqs_0921 putative outer membrane efflux protein K12340 tolC; outer membrane protein D dqs_3796 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D dqs_0186 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D dqs_0949 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:aoa01502] D dqs_0957 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D dqs_4069 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D dqs_0951 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D dqs_0952 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D dqs_0955 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:aoa01503] D dqs_2359 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D dqs_1358 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D dqs_1759 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_1913 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_0102 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_3819 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_0394 putative protein disulfide-isomerase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D dqs_1165 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D dqs_3267 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_0258 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_2713 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_3266 RND efflux transporter permease K18138 acrB; multidrug efflux pump D dqs_0259 RND efflux transporter permease K18138 acrB; multidrug efflux pump D dqs_0921 putative outer membrane efflux protein K12340 tolC; outer membrane protein D dqs_2052 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:aoa01000] C 01001 Protein kinases [BR:aoa01001] D dqs_2746 putative protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D dqs_0969 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D dqs_1089 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D dqs_3925 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D dqs_4052 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D dqs_1371 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D dqs_1299 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D dqs_2373 tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D dqs_3420 protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D dqs_0174 phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D dqs_1858 osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D dqs_0772 sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D dqs_3085 two component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D dqs_2934 two component sensor protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D dqs_3818 two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D dqs_0276 two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D dqs_3114 putative two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D dqs_3106 putative two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D dqs_1627 putative two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D dqs_1091 putative alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D dqs_0810 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D dqs_4126 nitrogen regulation protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D dqs_3496 two component system sensor protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D dqs_2903 putative two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D dqs_2070 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D dqs_3962 hydrogen uptake histidine-kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3] D dqs_0145 putative hybrid sensor and regulator protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D dqs_3635 putative sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D dqs_0082 putative sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D dqs_1575 chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_1585 chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_0418 putative chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_3600 putative pilus biogenese protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D dqs_0990 two-component sensor kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3] D dqs_2818 putative sensor histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D dqs_2850 putative sensory box sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D dqs_2492 putative sensor kinase/response regulator hybrid protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D dqs_3581 putative virulence regulator protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D dqs_4088 putative hybrid sensor and regulator protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D dqs_2546 putative sensor-regulator protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D dqs_2635 putative hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D dqs_2736 putative two-component hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:aoa01009] D dqs_0656 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D dqs_1549 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D dqs_4105 putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D dqs_3469 putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D dqs_0967 putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D dqs_4029 putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D dqs_1103 putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D dqs_1818 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:aoa01002] D dqs_1319 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D dqs_3373 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D dqs_3944 hydrogenase expression/formation protein hupD K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D dqs_1540 hypothetical protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D dqs_1704 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D dqs_2688 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D dqs_2407 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D dqs_1161 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D dqs_3787 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D dqs_3781 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D dqs_3384 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D dqs_3410 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D dqs_3412 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D dqs_0028 ThiJ/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D dqs_3136 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D dqs_3279 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D dqs_3017 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D dqs_1421 hypothetical protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D dqs_0839 Zn dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D dqs_0840 Zn dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D dqs_3044 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D dqs_2162 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D dqs_1374 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D dqs_2065 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D dqs_3030 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D dqs_3689 carboxypeptidase TAQ K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D dqs_1510 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D dqs_1640 putative metalloprotease K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D dqs_0111 M48 family peptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D dqs_3060 peptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D dqs_2057 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D dqs_2716 HlyD domain-containing protein K16922 yydH; putative peptide zinc metalloprotease protein D dqs_1835 hypothetical protein K09933 mtfA; MtfA peptidase D dqs_1446 hypothetical protein K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19] D dqs_1759 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_1913 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_0102 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_3819 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_3475 serine protease AlgW K04772 degQ; serine protease DegQ [EC:3.4.21.-] D dqs_0189 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D dqs_0893 D-alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D dqs_3801 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D dqs_2200 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D dqs_2264 ATPase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D dqs_1075 ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D dqs_2198 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D dqs_2190 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D dqs_1765 LepB protein K03100 lepB; signal peptidase I [EC:3.4.21.89] D dqs_1298 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D dqs_2468 tail-specific penicillin-binding protein protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D dqs_2945 carboxy-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D dqs_4110 putative protease IV K04773 sppA; protease IV [EC:3.4.21.-] D dqs_1742 peptidase K04773 sppA; protease IV [EC:3.4.21.-] D dqs_0434 ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D dqs_1598 Ggt protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D dqs_3926 hypothetical protein K08303 prtC; U32 family peptidase [EC:3.4.-.-] D dqs_1366 peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D dqs_0385 peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D dqs_0386 peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D dqs_2929 PmbA protein K03592 pmbA; PmbA protein D dqs_1416 TldD protein K03568 tldD; TldD protein D dqs_0069 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D dqs_1007 hypothetical protein K04087 hflC; modulator of FtsH protease HflC D dqs_1006 putative Hflk protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:aoa01003] D dqs_2506 glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D dqs_3732 glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D dqs_1937 glycosyltransferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D dqs_1039 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D dqs_1950 putative glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D dqs_0775 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D dqs_3796 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D dqs_2507 dolichyl-phosphate-mannose-protein mannosyltransferase K14340 K14340; mannosyltransferase [EC:2.4.1.-] D dqs_2366 putative glycosyltransferase K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-] D dqs_2370 putative glycosyltransferase K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252] D dqs_2368 putative glucuronyl transferase K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264] C 01005 Lipopolysaccharide biosynthesis proteins [BR:aoa01005] D dqs_2052 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D dqs_2051 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D dqs_0961 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D dqs_2054 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D dqs_2296 hypothetical protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D dqs_1163 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D dqs_1593 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D dqs_0659 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D dqs_0660 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D dqs_0922 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D dqs_1878 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D dqs_2278 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D dqs_1595 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D dqs_0863 phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D dqs_0864 sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D dqs_3706 ADP-heptose synthase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D dqs_3443 ADP-heptose synthase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D dqs_3709 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D dqs_2451 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D dqs_3708 ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D dqs_3710 glucosyltransferase I K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D dqs_2448 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D dqs_3711 lipopolysaccharide core biosynthesis protein K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D dqs_0941 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D dqs_0857 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D dqs_1956 heptose phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D dqs_3707 putative ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D dqs_3725 cell envelope biogenesis membrane protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-] D dqs_0823 glycosyl transferase family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:aoa01011] D dqs_0885 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D dqs_3834 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D dqs_0956 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D dqs_0953 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D dqs_0950 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D dqs_0957 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D dqs_4069 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D dqs_2890 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D dqs_0952 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D dqs_0955 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D dqs_0781 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D dqs_1935 phosphoesterase family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D dqs_2324 virulence factor K03980 murJ; putative peptidoglycan lipid II flippase D dqs_3796 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D dqs_0186 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D dqs_0949 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D dqs_0189 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D dqs_3801 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D dqs_0893 D-alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D dqs_0775 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D dqs_3136 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D dqs_1421 hypothetical protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D dqs_0506 putative soulbe lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D dqs_0799 membrane-bound transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D dqs_1201 putative membrane-bound lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D dqs_2186 membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D dqs_1449 hypothetical protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D dqs_1717 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D dqs_0188 lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D dqs_2359 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D dqs_1358 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D dqs_3487 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:aoa01004] D dqs_1749 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D dqs_1748 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D dqs_0305 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D dqs_0297 putative Beta-ketoacyl synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D dqs_4022 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D dqs_4055 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D dqs_1752 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D dqs_1750 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D dqs_4058 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D dqs_2053 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D dqs_0272 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D dqs_2262 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D dqs_1692 enoyl-acyl carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D dqs_1816 acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D dqs_2255 putative acyl-CoA thioesterase I K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D dqs_0477 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D dqs_3251 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D dqs_2558 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D dqs_3311 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D dqs_2282 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D dqs_3304 putative long chain fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_3590 putative Acetyl-coenzyme A synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_1141 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_3200 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D dqs_1747 putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D dqs_3360 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D dqs_0858 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D dqs_0925 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:aoa01008] D dqs_0678 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:aoa01006] D dqs_1314 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D dqs_1115 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D dqs_2060 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D dqs_2039 putative phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D dqs_3263 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D dqs_3756 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D dqs_0490 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D dqs_3432 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:aoa01007] D dqs_1602 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D dqs_0907 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D dqs_0819 glutamate-tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D dqs_2891 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D dqs_3840 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D dqs_1168 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D dqs_0392 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D dqs_3340 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D dqs_1320 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D dqs_3047 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D dqs_3352 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D dqs_1610 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D dqs_3376 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D dqs_1000 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D dqs_0855 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D dqs_0856 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D dqs_1491 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D dqs_2900 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D dqs_1188 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D dqs_2915 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D dqs_1192 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D dqs_1193 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D dqs_2211 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D dqs_1735 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D dqs_3498 putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D dqs_2159 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D dqs_3485 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_1177 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D dqs_2044 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D dqs_3519 putative transaminase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D dqs_2229 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D dqs_0388 hypothetical protein K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D dqs_2321 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D dqs_1310 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D dqs_2043 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D dqs_3592 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D dqs_0190 D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D dqs_0142 branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D dqs_2910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D dqs_0212 para-aminobenzoate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D dqs_1175 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:aoa00194] D dqs_1993 plant type ferredoxin like protein K02639 petF; ferredoxin D dqs_2589 ferredoxin-like protein K02639 petF; ferredoxin D dqs_0169 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D dqs_0168 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D dqs_0167 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D dqs_0166 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D dqs_0165 putative ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D dqs_0164 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D dqs_0163 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D dqs_0162 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D dqs_0161 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:aoa03000] D dqs_2392 putative ethanolamine operon transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D dqs_3154 putative AraC-like transcriptional regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB D dqs_2591 PobR regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D dqs_2683 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D dqs_0050 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D dqs_2425 bifunctional transcriptional activator/DNA repair enzyme protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D dqs_0141 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D dqs_3761 glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D dqs_0343 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D dqs_1117 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D dqs_3900 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D dqs_0981 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D dqs_0104 putative oxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D dqs_0445 transcriptional regulator CysB-like protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D dqs_1453 transcriptional regulator CysB-like protein K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D dqs_2457 transcriptional regulator CysB-like protein K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D dqs_4003 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D dqs_1362 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D dqs_2728 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D dqs_2704 putative nitrogen assimilation regulatory protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D dqs_1985 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D dqs_3980 putative glycerol-3-phosphate regulon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D dqs_1671 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D dqs_2393 putative pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D dqs_1278 L-lactate dehydrogenase operon regulatory protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D dqs_1098 glc operon transcriptional activator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D dqs_2124 GntR family transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D dqs_2581 transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D dqs_2658 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D dqs_0340 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D dqs_3198 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D dqs_4067 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D dqs_2551 bkd operon transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D dqs_1476 putative regulatory protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D dqs_1601 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D dqs_3446 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D dqs_0713 putative regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D dqs_2739 putative ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D dqs_1486 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D dqs_1473 fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D dqs_3022 putative transcription regulator, Nnr-type K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D dqs_1828 putative cyclic nucleotide-binding protein K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator D dqs_3219 putative transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D dqs_3229 putative Fnr-like transcriptional activator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D dqs_0471 putative Dnr-like transcriptional activator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D dqs_2173 Rrf2 family protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D dqs_3232 AAU3 protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D dqs_2482 ArsR family regulatory protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D dqs_0160 putative transcriptional repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D dqs_3189 anaerobic benzoate catabolism transcriptional regulator K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator D dqs_0808 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D dqs_3033 putative fis-like DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D dqs_0583 hypothetical protein K07724 ner; Ner family transcriptional regulator D dqs_1300 transcription regulator protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D dqs_0366 transcriptional regulator, Xre family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D dqs_2985 sigma-54-dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D dqs_3072 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D dqs_1340 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D dqs_4019 sigma-54-dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D dqs_3080 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D dqs_0529 nif-specific regulatory protein K02584 nifA; Nif-specific regulatory protein D dqs_2621 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein D dqs_3989 putative molybdenum transport protein K02019 modE; molybdate transport system regulatory protein D dqs_3990 putative molybdenum-pterin-binding-protein K02019 modE; molybdate transport system regulatory protein D dqs_3260 nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D dqs_3904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D dqs_3243 transcriptional activator K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D dqs_1854 putative BolA-like protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D dqs_0155 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D dqs_2742 heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D dqs_0886 putative regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase D dqs_3604 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D dqs_2597 negative transcriptional regulator K07734 paiB; transcriptional regulator D dqs_3602 transcriptional regulator K07735 algH; putative transcriptional regulator D dqs_0262 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor D dqs_2234 DksA2 protein K06204 dksA; RNA polymerase-binding transcription factor D dqs_1920 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D dqs_2941 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D dqs_0946 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:aoa03021] D dqs_3530 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D dqs_3563 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D dqs_3562 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D dqs_4095 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D dqs_3364 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D dqs_1200 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D dqs_1755 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D dqs_3097 putative RNA polymerase sigma factor SigZ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D dqs_3285 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D dqs_0085 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D dqs_2723 putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D dqs_2670 RNA polymerase ECF-subfamily sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D dqs_3430 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D dqs_0514 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D dqs_1939 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D dqs_1218 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D dqs_2240 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D dqs_0330 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D dqs_3568 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D dqs_1037 stringent starvation protein A K03599 sspA; stringent starvation protein A D dqs_1038 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D dqs_1756 putative sigma-E factor, negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA D dqs_1757 putative sigma factor regulatory protein K03598 rseB; sigma-E factor negative regulatory protein RseB D dqs_0569 sigma-E factor regulatory protein K03803 rseC; sigma-E factor negative regulatory protein RseC D dqs_1758 putative sigma-E factor regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC D dqs_0262 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor D dqs_2234 DksA2 protein K06204 dksA; RNA polymerase-binding transcription factor D dqs_1920 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D dqs_1506 putative transcription elongation factor K03624 greA; transcription elongation factor GreA D dqs_1548 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D dqs_1137 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:aoa03019] D dqs_1738 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D dqs_3755 putative ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-] D dqs_1767 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D dqs_1013 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D dqs_3378 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D dqs_1641 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D dqs_3665 putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D dqs_1109 putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D dqs_2254 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D dqs_3456 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D dqs_2277 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D dqs_2235 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D dqs_1137 transcription termination factor Rho K03628 rho; transcription termination factor Rho D dqs_1171 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D dqs_2496 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1048 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1338 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1004 RNA-binding protein Hfq K03666 hfq; host factor-I protein D dqs_1839 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D dqs_3272 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D dqs_2899 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D dqs_1241 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A D dqs_0410 hypothetical protein K06958 rapZ; RNase adapter protein RapZ D dqs_0785 putative ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:aoa03011] D dqs_1180 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D dqs_2064 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D dqs_3550 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D dqs_3531 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D dqs_3539 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D dqs_0787 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D dqs_3560 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D dqs_3542 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D dqs_2894 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D dqs_3557 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D dqs_3532 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D dqs_3561 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D dqs_3533 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D dqs_3543 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D dqs_2236 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D dqs_3038 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D dqs_3547 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D dqs_0789 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D dqs_3552 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D dqs_2323 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D dqs_3362 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D dqs_3566 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D dqs_3553 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D dqs_3556 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D dqs_3555 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D dqs_3544 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D dqs_3541 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D dqs_0790 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D dqs_3565 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D dqs_3567 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D dqs_3564 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D dqs_2895 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D dqs_3546 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D dqs_3537 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D dqs_3549 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D dqs_3529 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D dqs_3540 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D dqs_3041 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D dqs_1191 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D dqs_3299 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D dqs_3551 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D dqs_3554 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D dqs_3545 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D dqs_3300 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D dqs_1247 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D dqs_3548 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D dqs_3538 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D dqs_1644 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D dqs_1746 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D dqs_1246 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D dqs_4135 putative ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D dqs_1190 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D dqs_3534 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D dqs_0828 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D dqs_0202 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D dqs_0796 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D dqs_1407 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D dqs_3328 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D dqs_0198 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_0792 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_1403 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_3332 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_0201 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_3329 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_1406 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_0795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:aoa03009] D dqs_1767 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D dqs_1641 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D dqs_1768 GTP-binding protein Era K03595 era; GTPase D dqs_3301 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D dqs_0262 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor D dqs_2234 DksA2 protein K06204 dksA; RNA polymerase-binding transcription factor D dqs_1920 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D dqs_2240 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D dqs_0330 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D dqs_3568 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D dqs_0094 pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D dqs_3024 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D dqs_3254 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D dqs_4128 Sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D dqs_0838 putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D dqs_2971 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D dqs_0151 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D dqs_0947 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D dqs_1743 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D dqs_0943 rRNA (cytidine-2'-O-)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D dqs_0655 RNA binding methyltransferase FtsJ like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D dqs_1014 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D dqs_1509 ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D dqs_3752 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D dqs_0666 SAM dependent methyl transferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D dqs_2269 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D dqs_3620 hypothetical protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D dqs_1110 ribosomal RNA large subunit methyltransferase M K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D dqs_0996 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D dqs_0132 RNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D dqs_1210 23S rRNA 5-methyluridine methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D dqs_0023 pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D dqs_2023 pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D dqs_2242 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D dqs_1739 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D dqs_1120 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D dqs_1212 pseudouridylate synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D dqs_0898 pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D dqs_1862 putative ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D dqs_3039 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM D dqs_1127 ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D dqs_0049 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D dqs_0932 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D dqs_2163 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D dqs_1209 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D dqs_1738 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D dqs_3755 putative ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-] D dqs_3603 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D dqs_2254 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D dqs_1639 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D dqs_1003 GTP-binding protein EngA K03977 engA; GTPase D dqs_2252 GTPase K14540 rbgA; ribosome biogenesis GTPase A D dqs_1447 GTP-binding protein HflX K03665 hflX; GTPase D dqs_1005 GTP-binding subunit of protease specific for phage lambda K03665 hflX; GTPase D dqs_1502 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D dqs_4094 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D dqs_2238 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D dqs_2241 hypothetical protein K09748 rimP; ribosome maturation factor RimP D dqs_1651 hypothetical protein K14761 rlbA; ribosome-associated protein D dqs_3751 hypothetical protein K09710 ybeB; ribosome-associated protein D dqs_0850 hypothetical protein K07042 ybeY; probable rRNA maturation factor D dqs_1508 hypothetical protein K07574 yhbY; RNA-binding protein D dqs_2928 hypothetical protein K09889 yjgA; ribosome-associated protein D dqs_0513 sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor D dqs_0826 GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase D dqs_1745 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:aoa03016] D dqs_3378 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D dqs_0503 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D dqs_2707 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D dqs_0089 rtcB protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D dqs_1602 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D dqs_2900 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D dqs_1320 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D dqs_3352 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D dqs_3340 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D dqs_0907 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D dqs_0392 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D dqs_1610 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D dqs_3376 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D dqs_2915 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D dqs_1188 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D dqs_1491 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D dqs_1168 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D dqs_3047 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D dqs_1000 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D dqs_1192 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D dqs_1193 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D dqs_2891 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D dqs_3840 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D dqs_0119 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D dqs_1622 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D dqs_4111 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D dqs_1646 tRNA (guanine-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D dqs_1153 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D dqs_2237 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D dqs_0562 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2171 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2172 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_1502 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D dqs_3263 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D dqs_4131 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D dqs_0150 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D dqs_1815 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D dqs_4134 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D dqs_4106 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D dqs_0778 putative exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D dqs_3998 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D dqs_1390 putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D dqs_0855 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D dqs_0856 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D dqs_0819 glutamate-tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D dqs_1711 cytidine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D dqs_3032 putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D dqs_1645 dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D dqs_0848 dimethylallyl adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D dqs_2175 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D dqs_1432 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D dqs_3040 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D dqs_2954 tRNA/rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D dqs_2048 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D dqs_1588 pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D dqs_0023 pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D dqs_2023 pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D dqs_2907 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D dqs_0496 C32 tRNA thiolase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D dqs_3059 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D dqs_2169 putative regulatory protein K13628 iscA; iron-sulfur cluster assembly protein D dqs_0564 HesB/yadR/yfhF family protein K13628 iscA; iron-sulfur cluster assembly protein D dqs_1716 aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D dqs_1605 5-methylaminomethyl-2-thiouridine methyltransferase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D dqs_0979 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D dqs_0424 ExsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D dqs_3250 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D dqs_0425 putative radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D dqs_3652 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D dqs_1360 electron transport protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D dqs_1814 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D dqs_0978 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D dqs_0988 putative tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D dqs_1861 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D dqs_3361 putative DNA-binding/iron metalloprotein/AP endonuclease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D dqs_1359 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D dqs_3517 HesA/MoeB/ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D dqs_1013 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D dqs_2235 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:aoa03012] D dqs_2239 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D dqs_1189 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D dqs_3896 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D dqs_2063 elongation factor Ts K02357 tsf; elongation factor Ts D dqs_3558 elongation factor Tu K02358 tuf; elongation factor Tu D dqs_3571 elongation factor Tu K02358 tuf; elongation factor Tu D dqs_3559 elongation factor G K02355 fusA; elongation factor G D dqs_1260 elongation factor G K02355 fusA; elongation factor G D dqs_1082 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D dqs_2061 ribosome recycling factor K02838 frr; ribosome recycling factor D dqs_1083 HemK protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D dqs_0827 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D dqs_3535 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D dqs_2763 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D dqs_0096 elongation factor P K02356 efp; elongation factor P D dqs_1620 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D dqs_0090 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:aoa03110] D dqs_1243 ATP-dependent Clp protease ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D dqs_1689 ATP-dependent Clp protease ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D dqs_2199 ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D dqs_0435 ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D dqs_1549 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D dqs_1171 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D dqs_2167 chaperone protein HscA K04044 hscA; molecular chaperone HscA D dqs_3769 chaperon protein K04046 yegD; hypothetical chaperone protein D dqs_2496 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1048 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1338 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1170 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D dqs_1381 putative chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D dqs_2168 co-chaperone HscB K04082 hscB; molecular chaperone HscB D dqs_1807 putative 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33 D dqs_1172 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D dqs_3380 putative small heat shock protein K13993 HSP20; HSP20 family protein D dqs_0438 heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D dqs_2495 chaperonin GroES K04078 groES; chaperonin GroES D dqs_1047 chaperonin GroES K04078 groES; chaperonin GroES D dqs_1759 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_1913 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_0102 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_3819 serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D dqs_1510 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D dqs_0162 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D dqs_2951 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D dqs_2286 hypothetical protein K09796 pccA; periplasmic copper chaperone A D dqs_3951 hydrogenase nickel inorporation protein hypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D dqs_3952 hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D dqs_1165 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D dqs_1164 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D dqs_1691 putative peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D dqs_3457 peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D dqs_1318 putative peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D dqs_2188 peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D dqs_0556 peptidyl-prolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D dqs_1853 putative cell binding factor K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D dqs_3026 putative peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D dqs_2804 putative thioredoxin-disulfide reductase K03671 TXN; thioredoxin D dqs_1138 thioredoxin-disulfide reductase K03671 TXN; thioredoxin D dqs_3845 thioredoxin-disulfide reductase K03671 TXN; thioredoxin D dqs_2643 thioredoxin-disulfide reductase K03671 TXN; thioredoxin D dqs_0207 Thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D dqs_2950 glutaredoxin K03676 grxC; glutaredoxin 3 D dqs_1084 hypothetical protein K07390 grxD; monothiol glutaredoxin D dqs_0394 putative protein disulfide-isomerase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D dqs_3511 putative disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D dqs_0798 putative protein disulfide-isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D dqs_0334 putative protein disulfide-isomerase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D dqs_4073 protein disulfide-isomerase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:aoa04131] D dqs_1932 hypothetical protein K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D dqs_0995 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D dqs_0382 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D dqs_2486 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D dqs_2976 putative glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D dqs_2947 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D dqs_2981 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D dqs_1549 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:aoa03051] D dqs_1549 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:aoa03032] D dqs_2181 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D dqs_0595 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D dqs_0328 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D dqs_1194 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D dqs_1181 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D dqs_0001 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D dqs_0791 DnaB protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D dqs_3363 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D dqs_3524 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D dqs_3345 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D dqs_0002 DNA-directed DNA polymerase K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D dqs_3045 DNA-directed DNA polymerase K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D dqs_3354 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D dqs_1719 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D dqs_4091 putative DNA-directed polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2335 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2554 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_0077 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2180 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_1031 DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D dqs_2050 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D dqs_3743 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D dqs_2156 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D dqs_3270 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D dqs_1174 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D dqs_0003 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D dqs_1223 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D dqs_1226 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D dqs_1944 hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D dqs_0105 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:aoa03036] D dqs_1767 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D dqs_3358 putative trans-acting regulatory protein HvrA K03746 hns; DNA-binding protein H-NS D dqs_0208 putative trans-acting regulatory protein HvrA K03746 hns; DNA-binding protein H-NS D dqs_0595 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D dqs_0328 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D dqs_1194 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D dqs_1181 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D dqs_0001 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D dqs_3033 putative fis-like DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D dqs_1004 RNA-binding protein Hfq K03666 hfq; host factor-I protein D dqs_3198 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D dqs_4067 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D dqs_2551 bkd operon transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D dqs_0204 hypothetical protein K06899 ndpA; nucleoid-associated protein D dqs_2158 chromosome segregation protein K03529 smc; chromosome segregation protein D dqs_2244 hypothetical protein K05896 scpA; segregation and condensation protein A D dqs_2243 putative segregation and condensation protein B K06024 scpB; segregation and condensation protein B D dqs_0959 cell division protein FtsA K03590 ftsA; cell division protein FtsA D dqs_2276 hypothetical protein K05589 ftsB; cell division protein FtsB D dqs_0842 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D dqs_0949 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D dqs_1487 putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D dqs_0948 putative cell division protein FtsL K03586 ftsL; cell division protein FtsL D dqs_0958 putative cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D dqs_0954 cell division protein FtsW K03588 ftsW; cell division protein FtsW D dqs_0843 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D dqs_0960 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D dqs_0703 hypothetical protein K09888 zapA; cell division protein ZapA D dqs_0702 hypothetical protein K09892 zapB; cell division protein ZapB D dqs_0804 hypothetical protein K18778 zapD; cell division protein ZapD D dqs_1682 ATPase K06916 zapE; cell division protein ZapE D dqs_2359 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D dqs_1358 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D dqs_3267 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_0258 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_2713 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_1806 putative cell division inhibitor K03610 minC; septum site-determining protein MinC D dqs_1805 putative septum site-determining protein K03609 minD; septum site-determining protein MinD D dqs_1804 putative cell division topological specificity factor K03608 minE; cell division topological specificity factor D dqs_0183 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D dqs_0184 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D dqs_0185 rod shape-determining protein K03571 mreD; rod shape-determining protein MreD D dqs_0187 rod shape-determining protein K05837 rodA; rod shape determining protein RodA D dqs_3349 ParA family protein K03496 parA; chromosome partitioning protein D dqs_0152 ParA family protein K03496 parA; chromosome partitioning protein D dqs_0355 ParA family protein K03496 parA; chromosome partitioning protein D dqs_3578 hypothetical protein K03496 parA; chromosome partitioning protein D dqs_0155 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D dqs_1223 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D dqs_1226 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D dqs_0150 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D dqs_0151 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D dqs_0664 site-specific recombinase K03733 xerC; integrase/recombinase XerC D dqs_3356 integrase/recombinase K04763 xerD; integrase/recombinase XerD D dqs_3338 putative iron sulfur binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D dqs_2961 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:aoa03400] D dqs_3601 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D dqs_4119 uracil-DNA glycosylase K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-] D dqs_3964 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D dqs_1559 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D dqs_0802 nucleoside hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D dqs_1251 mutT family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D dqs_1250 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D dqs_2425 bifunctional transcriptional activator/DNA repair enzyme protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D dqs_2426 DNA-directed DNA polymerase K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D dqs_1863 DNA-directed DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D dqs_1983 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D dqs_3764 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D dqs_0834 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D dqs_3809 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D dqs_3020 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D dqs_1628 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D dqs_2156 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D dqs_3743 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D dqs_3526 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D dqs_0098 putative excinuclease ABC subunit K03701 uvrA; excinuclease ABC subunit A D dqs_1736 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D dqs_1773 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D dqs_3350 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D dqs_0357 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D dqs_3563 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D dqs_3562 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D dqs_3530 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D dqs_4095 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D dqs_1823 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D dqs_2178 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D dqs_3258 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D dqs_1590 exodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D dqs_1315 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D dqs_3345 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D dqs_0002 DNA-directed DNA polymerase K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D dqs_3045 DNA-directed DNA polymerase K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D dqs_3354 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D dqs_1719 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D dqs_4091 putative DNA-directed polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2335 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2554 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_0077 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_2180 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D dqs_1031 DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D dqs_3524 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D dqs_3995 ATP-dependent exoDNAse subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D dqs_4002 DNA helicase K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D dqs_3994 DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D dqs_0517 recombinase A K03553 recA; recombination protein RecA D dqs_0670 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D dqs_0669 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D dqs_0641 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D dqs_4121 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D dqs_0788 putative primosomal replication protein K02686 priB; primosomal replication protein N D dqs_0214 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D dqs_0213 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D dqs_1866 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D dqs_0488 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D dqs_1769 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D dqs_1033 recombination protein RecR K06187 recR; recombination protein RecR D dqs_2740 DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N) D dqs_0092 recombination associated protein K03554 rdgC; recombination associated protein RdgC D dqs_0646 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D dqs_1890 hypothetical protein K10979 ku; DNA end-binding protein Ku D dqs_1891 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D dqs_1174 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D dqs_0003 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D dqs_1944 hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D dqs_0595 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D dqs_0328 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D dqs_3033 putative fis-like DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D dqs_1194 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D dqs_1181 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D dqs_3456 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D dqs_3358 putative trans-acting regulatory protein HvrA K03746 hns; DNA-binding protein H-NS D dqs_0208 putative trans-acting regulatory protein HvrA K03746 hns; DNA-binding protein H-NS D dqs_2921 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D dqs_2190 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D dqs_4098 hypothetical protein K14160 imuA; protein ImuA D dqs_4099 hypothetical protein K14161 imuB; protein ImuB D dqs_4100 DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D dqs_0516 regulatory protein K03565 recX; regulatory protein D dqs_0195 ATP-dependent DNA helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D dqs_1683 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D dqs_0456 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D dqs_1535 putative ribonucleoside reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:aoa03029] D dqs_1035 ubiquinol-cytochrome c reductase cytochrome b protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D dqs_2239 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D dqs_1189 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D dqs_2063 elongation factor Ts K02357 tsf; elongation factor Ts D dqs_3558 elongation factor Tu K02358 tuf; elongation factor Tu D dqs_3571 elongation factor Tu K02358 tuf; elongation factor Tu D dqs_3559 elongation factor G K02355 fusA; elongation factor G D dqs_1260 elongation factor G K02355 fusA; elongation factor G D dqs_1768 GTP-binding protein Era K03595 era; GTPase D dqs_2891 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D dqs_3352 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D dqs_3376 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D dqs_0392 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D dqs_0181 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D dqs_0179 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D dqs_0182 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D dqs_3524 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D dqs_2056 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D dqs_1171 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D dqs_1172 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D dqs_2496 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1048 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1338 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_2495 chaperonin GroES K04078 groES; chaperonin GroES D dqs_1047 chaperonin GroES K04078 groES; chaperonin GroES D dqs_1170 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D dqs_1381 putative chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D dqs_0562 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2171 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2172 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2168 co-chaperone HscB K04082 hscB; molecular chaperone HscB D dqs_1084 hypothetical protein K07390 grxD; monothiol glutaredoxin D dqs_3338 putative iron sulfur binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D dqs_3432 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D dqs_3439 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D dqs_3433 putative cytochrome aa3 oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D dqs_4132 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D dqs_3435 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D dqs_3431 SCO1/SenC family protein K07152 SCO1; protein SCO1 D dqs_1549 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:aoa02000] D dqs_2446 Lipid A export ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D dqs_3715 lipid A export ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D dqs_0464 composite transport ATP-binding permase K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D dqs_0729 ABC transporter permease and ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D dqs_1970 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D dqs_3777 ABC transporter permease and ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D dqs_1351 ABC transporter permease and ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D dqs_2920 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D dqs_0715 toxin secretion ABC transporter permease and ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D dqs_0680 ABC transporter ATP-binding protein/permease K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D dqs_2442 ABC transporter, ATP-binding cassette K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D dqs_3317 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D dqs_1457 putative sulfate transport system substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D dqs_2406 putative sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D dqs_2493 putative periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D dqs_1456 sulfate transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D dqs_1455 putative sulfate transport system permease K02047 cysW; sulfate/thiosulfate transport system permease protein D dqs_1454 putative sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D dqs_3988 putative molybdate transport system periplasmic-binding protein K02020 modA; molybdate transport system substrate-binding protein D dqs_3987 putative molybdenum transport system permease K02018 modB; molybdate transport system permease protein D dqs_3986 putative molybdenum transport system ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D dqs_3984 tungstate ABC transporter permease K05772 tupA; tungstate transport system substrate-binding protein D dqs_3064 tungstate permease K05773 tupB; tungstate transport system permease protein D dqs_3063 tungstate ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D dqs_2625 hypothetical protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D dqs_1016 nitrate transport system periplasmic-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D dqs_2626 nitrate ABC transporter, permease K15577 nrtB; nitrate/nitrite transport system permease protein D dqs_1017 putative nitrate transport system permease K15577 nrtB; nitrate/nitrite transport system permease protein D dqs_2627 nitrate ABC transporter, ATP-binding protein C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D dqs_1018 putative nitrate transport system ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D dqs_2530 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D dqs_2532 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D dqs_2529 ABC-type transporter membrane permease K15554 ssuC; sulfonate transport system permease protein D dqs_2528 ABC transporter-like protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D dqs_2338 putative iron transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D dqs_3977 putative ferric transport system periplasmic-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D dqs_2339 iron (III) transport system permease K02011 afuB; iron(III) transport system permease protein D dqs_3979 putative ferrric transport system permease K02011 afuB; iron(III) transport system permease protein D dqs_2340 putative iron (III) transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D dqs_3978 Fe3+-transporting ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D dqs_1370 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D dqs_2535 putative sulfonate transport system periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D dqs_3523 putative aliphatic sulfonates binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D dqs_3655 putative periplasmic-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D dqs_2537 putative sulfonate transport system permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D dqs_3657 putative aliphatic sulfonates transport systempermease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D dqs_2536 putative sulfonate transport system ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D dqs_3656 putative aliphatic sulfonates transport systemATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D dqs_0218 lipoprotein K07335 bmpA; basic membrane protein A and related proteins D dqs_2348 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D dqs_2349 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D dqs_2347 hypothetical protein K23537 nupA; general nucleoside transport system ATP-binding protein D dqs_1435 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D dqs_1436 putative ATP binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D dqs_1387 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D dqs_0878 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D dqs_1843 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D dqs_1389 putative ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D dqs_0877 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D dqs_1841 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D dqs_1388 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D dqs_0876 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D dqs_1842 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D dqs_1386 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D dqs_1844 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D dqs_0577 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D dqs_0880 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D dqs_0881 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D dqs_1113 putative glycerol-3-phosphate-binding periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D dqs_1513 phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein D dqs_0351 putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein D dqs_1514 phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D dqs_1515 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D dqs_1516 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D dqs_0453 putative glutamine-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D dqs_0451 putative glutamine transport permease K10002 gltK; glutamate/aspartate transport system permease protein D dqs_0452 putative glutamine transport permease K10003 gltJ; glutamate/aspartate transport system permease protein D dqs_0450 glutamine transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D dqs_1452 putative amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D dqs_1451 putative amino acid permease K09970 aapQ; general L-amino acid transport system permease protein D dqs_1450 putative amino acid permease K09971 aapM; general L-amino acid transport system permease protein D dqs_3184 putative leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_1496 extracellular ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_2653 putative leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3586 branched chain amino acid ABC transporter periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_0129 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3880 leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3881 leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_1240 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_2145 putative Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_0324 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3970 putative leucine-specific binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D dqs_3183 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_2656 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_3588 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_0130 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_3882 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_1236 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_2146 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_0325 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_3972 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D dqs_2655 branched-chain amino acid ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_2147 branched-chain amino acid ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0326 branched-chain amino acid ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0131 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3883 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_1237 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3971 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3182 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3587 putative branched-chain amino acid transport permease K01998 livM; branched-chain amino acid transport system permease protein D dqs_3181 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_3589 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0127 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_3884 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_1238 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D dqs_0128 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_3885 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_1239 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_0327 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_2148 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_3180 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_2654 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_3585 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D dqs_0743 putative aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein D dqs_0744 ABC transporter permease K11960 urtB; urea transport system permease protein D dqs_0745 ABC transporter membrane protein K11961 urtC; urea transport system permease protein D dqs_0746 ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D dqs_0747 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D dqs_1044 hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D dqs_1045 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D dqs_1046 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D dqs_2361 amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D dqs_2394 putative amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D dqs_3074 amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D dqs_2395 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D dqs_2396 amino acid permease K02029 ABC.PA.P; polar amino acid transport system permease protein D dqs_2397 glutamine transport ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D dqs_0232 putative dipeptide transport system periplasmic-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D dqs_1694 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D dqs_1695 putative oligopeptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D dqs_0233 putative dipeptide transport system permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D dqs_1696 oligopeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D dqs_0234 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D dqs_0235 putative dipeptide transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D dqs_2187 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D dqs_3663 putative vitamin B12 transport protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D dqs_3697 putative ABC transporter system, permease K02015 ABC.FEV.P; iron complex transport system permease protein D dqs_3696 putative ABC-type transporter ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D dqs_1330 putative periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D dqs_1332 putative manganese transport system permease K11708 troC; manganese/zinc/iron transport system permease protein D dqs_1333 putative manganese transport system permease K11709 troD; manganese/zinc/iron transport system permease protein D dqs_1331 putative manganese transport system ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D dqs_2354 putative cobalt transport system permease K02008 cbiQ; cobalt/nickel transport system permease protein D dqs_2353 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D dqs_2355 putative cobalt transport system ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D dqs_2351 putative cobalt transport system periplasmic-binding protein K10094 cbiK; nickel transport protein D dqs_2352 hypothetical protein K16915 cbiL; nickel transport protein D dqs_0709 putative manganese transport system periplasmic-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D dqs_0710 putative manganese transport system permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D dqs_0711 putative manganese transport system ATP-asa protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D dqs_3740 putative ABC polysaccharide exporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D dqs_3739 putative polysaccharide export transport system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D dqs_3043 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D dqs_3042 integral membrane protein K11720 lptG; lipopolysaccharide export system permease protein D dqs_0515 ABC transporter ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D dqs_0361 ABC transporter permease NodJ K09694 nodJ; lipooligosaccharide transport system permease protein D dqs_0372 ABC transporter ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D dqs_3239 putative copper transport system permease K19341 nosY; Cu-processing system permease protein D dqs_3240 putative copper transport system ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein D dqs_1632 putative lipoprotein transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D dqs_1633 lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D dqs_4076 heme exporter protein D K02196 ccmD; heme exporter protein D D dqs_4077 heme exporter protein C K02195 ccmC; heme exporter protein C D dqs_4078 heme exporter protein B K02194 ccmB; heme exporter protein B D dqs_4079 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D dqs_0843 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D dqs_0842 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D dqs_0883 ABC-2 type transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D dqs_0299 putative ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D dqs_3049 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D dqs_3490 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D dqs_0882 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D dqs_0302 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D dqs_3308 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D dqs_3309 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D dqs_1729 putative inner membrane transport permease K02004 ABC.CD.P; putative ABC transport system permease protein D dqs_0903 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D dqs_0904 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D dqs_0066 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D dqs_2036 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D dqs_3425 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D dqs_0905 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D dqs_1817 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D dqs_0065 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D dqs_2037 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D dqs_2192 multidrug resistance protein K26939 norM; MATE family, multidrug efflux pump D dqs_2700 putative 4-hydroxybenzoate transporter protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D dqs_1145 putative MFS metabolite transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D dqs_1408 putative nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D dqs_1864 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D dqs_4118 putative AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D dqs_2702 putative bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D dqs_3886 putative bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D dqs_0651 putative transmembrane efflux protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D dqs_3775 putative transmembrane efflux protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D dqs_0648 multidrug resistance transmembrane protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D dqs_2437 hypothetical protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D dqs_2734 putative fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D dqs_1665 putative membrane transport protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D dqs_3933 putative phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D dqs_3932 putative phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D dqs_3931 putative IIA component of sugar transport PTS system K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D dqs_0512 protein-Npi-phosphohistidine-sugar phosphotransferase K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D dqs_1652 fused NAD-binding/uncharacterized domain-containing protein K10716 kch; voltage-gated potassium channel D dqs_3019 ammonia permease K03320 amt; ammonium transporter, Amt family D dqs_3891 ammonium transporter K03320 amt; ammonium transporter, Amt family D dqs_3151 ammonium transporter K03320 amt; ammonium transporter, Amt family D dqs_0470 ammonia permease K03320 amt; ammonium transporter, Amt family D dqs_0504 putative stringent starvation protein A K00799 GST; glutathione S-transferase [EC:2.5.1.18] D dqs_2398 putative glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D dqs_1664 putative glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D dqs_0123 glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D dqs_0373 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D dqs_1037 stringent starvation protein A K03599 sspA; stringent starvation protein A D dqs_0084 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D dqs_2999 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D dqs_3003 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D dqs_0983 carrier/transport protein K19416 yccA; modulator of FtsH protease D dqs_1290 putative nitrite transporter K21993 fdhC; formate transporter D dqs_3974 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D dqs_0774 putative magnesium transport protein K06213 mgtE; magnesium transporter D dqs_1572 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D dqs_1219 flagellar motor protein K02556 motA; chemotaxis protein MotA D dqs_1573 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D dqs_1221 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D dqs_2460 putative biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB D dqs_0683 biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB D dqs_1591 biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB D dqs_0246 putative biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB D dqs_0247 putative biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D dqs_0248 putative biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D dqs_2461 putative biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D dqs_2462 putative biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D dqs_0682 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D dqs_1592 putative biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D dqs_0431 translocation protein TolQ K03562 tolQ; biopolymer transport protein TolQ D dqs_0430 putative translocation protein TolR K03560 tolR; biopolymer transport protein TolR D dqs_1822 putative magnesium and cobalt transport protein K03284 corA; magnesium transporter D dqs_0908 camphor resistance protein CrcB K06199 crcB; fluoride exporter D dqs_1693 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D dqs_0985 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D dqs_0752 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D dqs_2748 outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family D dqs_0478 long-chain fatty acid ABC transporter K06076 fadL; long-chain fatty acid transport protein D dqs_1803 autotransporter K12685 ssp; subtilase-type serine protease [EC:3.4.21.-] D dqs_0676 putative TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D dqs_2771 putative ferrichrome-iron TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D dqs_3698 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D dqs_2668 putative TonB-dependent receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D dqs_3130 TonB-dependent receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D dqs_1979 putative TonB-denpendent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D dqs_2289 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D dqs_3699 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D dqs_0103 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D dqs_0243 ferrichrome-iron TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D dqs_3996 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D dqs_0390 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D dqs_3133 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D dqs_3158 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D dqs_2350 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D dqs_2477 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D dqs_0238 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D dqs_0283 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system D dqs_3088 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D dqs_0921 putative outer membrane efflux protein K12340 tolC; outer membrane protein D dqs_0723 putative outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system D dqs_2731 outer membrane efflux protein K18903 oprC; outer membrane protein, multidrug efflux system D dqs_0260 RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system D dqs_3052 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D dqs_0679 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D dqs_2375 putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D dqs_3422 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D dqs_2056 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D dqs_1002 hypothetical protein K17713 bamB; outer membrane protein assembly factor BamB D dqs_1207 putative lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D dqs_1119 competence lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D dqs_2738 putative outer membrane lipoprotein OmlA K06186 bamE; outer membrane protein assembly factor BamE D dqs_1043 outer membrane protein K07278 tamA; translocation and assembly module TamA D dqs_3459 hypothetical protein K09800 tamB; translocation and assembly module TamB D dqs_0861 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D dqs_0862 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D dqs_3027 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D dqs_3353 putative lipoprotein K03643 lptE; LPS-assembly lipoprotein D dqs_0851 putative magnesium and cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D dqs_1263 hypothetical protein K06518 cidA; holin-like protein D dqs_1542 putative cobalt-zinc-cadmium resistance protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D dqs_1029 putative cation transporter protein K07238 TC.ZIP; zinc transporter, ZIP family D dqs_0281 putative cation efflux system protein K15726 czcA; heavy metal efflux system protein D dqs_3090 putative cation efflux system protein K07787 cusA; copper/silver efflux system protein D dqs_2730 RND efflux transporter permease K18902 bpeF; multidrug efflux pump D dqs_0918 RND efflux transporter permease K18303 mexK; multidrug efflux pump D dqs_3266 RND efflux transporter permease K18138 acrB; multidrug efflux pump D dqs_0259 RND efflux transporter permease K18138 acrB; multidrug efflux pump D dqs_2464 RND efflux transporter permease K07788 mdtB; multidrug efflux pump D dqs_2465 RND efflux transporter permease K07789 mdtC; multidrug efflux pump D dqs_3733 multidrug efflux transporter protein K03297 emrE; small multidrug resistance pump D dqs_2802 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D dqs_1273 LctP protein K00427 lldP; L-lactate permease D dqs_2799 Phosphate/sulfate permease K16322 pit; low-affinity inorganic phosphate transporter D dqs_0751 acetate permease K14393 actP; cation/acetate symporter D dqs_2553 putative sodium:solute sympoter K14393 actP; cation/acetate symporter D dqs_1052 acetate permease K14393 actP; cation/acetate symporter D dqs_0358 putative Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D dqs_2726 hypothetical protein K24160 NHA1; sodium/hydrogen antiporter D dqs_0460 putative glutathione-regulated potassium-efflux system protein K03455 KEA1_2_3; K+:H+ antiporter D dqs_0865 putative glutathione-regulated potassium-efflux system protein K03455 KEA1_2_3; K+:H+ antiporter D dqs_0984 putative potassium/proton antiporter K26735 KEA4_5_6; K+:H+ antiporter D dqs_4059 putative Na/H(+) antiporter K26731 CHX; K+:H+ antiporter D dqs_4123 putative potassium system uptake protein K03498 trkH; trk/ktr system potassium uptake protein D dqs_4124 potassium transporter peripheral membrane protein K03499 trkA; trk/ktr system potassium uptake protein D dqs_1550 putative chloride channel protein K03281 clcA; chloride channel protein, CIC family D dqs_3098 putative chromate transport protein K07240 chrA; chromate transporter D dqs_3341 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D dqs_3037 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D dqs_0991 c4-dicarboxylate-binding periplasmic protein K11688 dctP; C4-dicarboxylate-binding protein DctP D dqs_0992 C4-dicarboxylate ABC transporter substrate-binding protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D dqs_0993 TRAP dicarboxylate transporter subunit DctM K11690 dctM; C4-dicarboxylate transporter, DctM subunit D dqs_0256 TRAP-type C4-dicarboxylate transport system large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D dqs_2676 TRAP-type C4 dicarboxylate transport system large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D dqs_0255 DctQ1 protein K21394 yiaM; TRAP-type transport system small permease protein D dqs_2418 putative TRAP-type C4-dicarboxylate transport system small permease K21394 yiaM; TRAP-type transport system small permease protein D dqs_3822 putative c4-dicarboxylate-binding periplasmic protein K21395 yiaO; TRAP-type transport system periplasmic protein D dqs_0254 putative C4-dicarboxylate-binding periplasmic protein K21395 yiaO; TRAP-type transport system periplasmic protein D dqs_2416 putative periplasmic substrate binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D dqs_2568 putative C4-dicarboxylate-binding periplasmic protein K21395 yiaO; TRAP-type transport system periplasmic protein D dqs_2616 putative C4-dicarboxylate-binding periplasmic protein K21395 yiaO; TRAP-type transport system periplasmic protein D dqs_3444 hypothetical protein K03324 yjbB; phosphate:Na+ symporter D dqs_2486 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D dqs_2484 putative arsenical-resistance protein K03325 ACR3; arsenite transporter D dqs_2324 virulence factor K03980 murJ; putative peptidoglycan lipid II flippase D dqs_2691 putative malonate transporter K13936 mdcF; malonate transporter and related proteins D dqs_2708 putative malonate transporter K13936 mdcF; malonate transporter and related proteins D dqs_0436 putative malonate transporter K24180 mleP; malate permease and related proteins D dqs_2404 putative potassium uptake protein K03549 kup; KUP system potassium uptake protein D dqs_3688 leucine export protein LeuE K11250 leuE; leucine efflux protein D dqs_0671 hypothetical protein K26605 azlC; branched chain amino acid efflux pump D dqs_0672 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D dqs_2514 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D dqs_2524 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D dqs_2525 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D dqs_0117 hypothetical protein K09125 yhhQ; queuosine precursor transporter D dqs_2798 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D dqs_0954 cell division protein FtsW K03588 ftsW; cell division protein FtsW D dqs_0382 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D dqs_2459 periplasmic biopolymer transport protein linking inner and outer membranes K03832 tonB; periplasmic protein TonB D dqs_0684 putative TonB protein K03832 tonB; periplasmic protein TonB D dqs_0777 hypothetical protein K03832 tonB; periplasmic protein TonB D dqs_0249 hypothetical protein K03832 tonB; periplasmic protein TonB D dqs_0427 putative peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D dqs_0428 translocation protein TolB K03641 tolB; TolB protein D dqs_2526 hypothetical protein K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D dqs_0240 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system D dqs_0280 putative membrane fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system D dqs_3089 cation efflux transmembrane protein K07798 cusB; membrane fusion protein, copper/silver efflux system D dqs_0716 HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system D dqs_2729 membrane fusion protein K18901 bpeE; membrane fusion protein, multidrug efflux system D dqs_0917 membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system D dqs_3267 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_0258 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_2713 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_2463 membrane fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system D dqs_0681 periplasmic protein of efflux system K13888 macA; membrane fusion protein, macrolide-specific efflux system D dqs_2373 tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D dqs_3420 protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D dqs_3421 polysaccharide chain length determinant protein K25590 epsF; protein tyrosine kinase modulator D dqs_2374 putative exopolysaccharide biosynthesis protein K25590 epsF; protein tyrosine kinase modulator D dqs_0674 putative ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D dqs_2781 hypothetical protein K05770 TSPO; translocator protein D dqs_4074 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D dqs_2422 putative transport ATPase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D dqs_1972 putative Mg(2+) transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D dqs_1297 putative transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D dqs_4063 MltA-interacting protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:aoa02044] D dqs_0921 putative outer membrane efflux protein K12340 tolC; outer membrane protein D dqs_0715 toxin secretion ABC transporter permease and ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D dqs_0716 HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system D dqs_0723 putative outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system D dqs_3418 MSHA biogenesis protein MshM K02450 gspA; general secretion pathway protein A D dqs_2219 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D dqs_2435 general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D dqs_2224 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D dqs_2225 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D dqs_2217 hypothetical protein K02456 gspG; general secretion pathway protein G D dqs_2218 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D dqs_2226 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D dqs_3373 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D dqs_3494 pilin domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D dqs_3371 pilus biogenesis protein K02652 pilB; type IV pilus assembly protein PilB D dqs_0873 general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB D dqs_3372 type 4 pilus biogenesis protein K02653 pilC; type IV pilus assembly protein PilC D dqs_0872 general secretion pathway protein F K02653 pilC; type IV pilus assembly protein PilC D dqs_3058 putative prepilin like protein K02655 pilE; type IV pilus assembly protein PilE D dqs_2313 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE D dqs_0997 putative type 4 pilus biogenesis protein K02656 pilF; type IV pilus assembly protein PilF D dqs_3596 pilus protein K02657 pilG; twitching motility two-component system response regulator PilG D dqs_3597 pilus protein K02658 pilH; twitching motility two-component system response regulator PilH D dqs_3598 pilus biogenesis protein K02659 pilI; twitching motility protein PilI D dqs_3599 pilus biogenesis protein K02660 pilJ; twitching motility protein PilJ D dqs_3795 type 4 fimbrial biogenesis protein K02662 pilM; type IV pilus assembly protein PilM D dqs_3794 type 4 fimbrial biogenesis protein K02663 pilN; type IV pilus assembly protein PilN D dqs_3793 type 4 fimbrial biogenesis protein K02664 pilO; type IV pilus assembly protein PilO D dqs_3792 putative type 4 fimbrial biogenesis protein K02665 pilP; type IV pilus assembly protein PilP D dqs_3791 type 4 fimbrial biogenesis protein K02666 pilQ; type IV pilus assembly protein PilQ D dqs_3611 twitching motility protein K02669 pilT; twitching motility protein PilT D dqs_3612 twitching motility protein K02670 pilU; twitching motility protein PilU D dqs_2710 twitching motility protein K02670 pilU; twitching motility protein PilU D dqs_2161 twitching motility protein K02670 pilU; twitching motility protein PilU D dqs_2311 type 4 fimbrial biogenesis relatedtransmembrane protein K02671 pilV; type IV pilus assembly protein PilV D dqs_3054 putative prepilin-like protein K02671 pilV; type IV pilus assembly protein PilV D dqs_3055 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D dqs_2310 putative type 4 pilus biogenesis protein K02672 pilW; type IV pilus assembly protein PilW D dqs_3056 putative Tfp pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D dqs_2308 putative type 4 pilus biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1 D dqs_3057 putative Tfp pilus assembly protein K02674 pilY1; type IV pilus assembly protein PilY1 D dqs_1720 type IV pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D dqs_3053 putative pre-pilin like protein K08084 fimT; type IV fimbrial biogenesis protein FimT D dqs_2312 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D dqs_1151 putative type 4 pilus biogenesis K08086 fimV; pilus assembly protein FimV D dqs_3473 putative type 4 pilus biogenesis K08086 fimV; pilus assembly protein FimV D dqs_0875 general secretion pathway protein D K12282 mshL; MSHA biogenesis protein MshL D dqs_3608 hypothetical protein K02221 yggT; YggT family protein D dqs_1635 putative DNA uptake/competence protein K02238 comEC; competence protein ComEC D dqs_1215 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D dqs_1214 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D dqs_2845 flagellar related protein K04061 flhB2; flagellar biosynthesis protein D dqs_2851 flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D dqs_2853 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D dqs_2854 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D dqs_2859 flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D dqs_2860 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D dqs_2861 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D dqs_2862 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D dqs_2863 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D dqs_0798 putative protein disulfide-isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D dqs_1803 autotransporter K12685 ssp; subtilase-type serine protease [EC:3.4.21.-] D dqs_1422 hypothetical protein K11891 impL; type VI secretion system protein ImpL D dqs_4034 ImcF-like protein K11891 impL; type VI secretion system protein ImpL D dqs_1418 hypothetical protein K11892 impK; type VI secretion system protein ImpK D dqs_4035 hypothetical protein K11892 impK; type VI secretion system protein ImpK D dqs_1419 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ D dqs_4036 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ D dqs_1429 hypothetical protein K11895 impH; type VI secretion system protein ImpH D dqs_4046 hypothetical protein K11895 impH; type VI secretion system protein ImpH D dqs_1428 hypothetical protein K11896 impG; type VI secretion system protein ImpG D dqs_4045 hypothetical protein K11896 impG; type VI secretion system protein ImpG D dqs_1417 hypothetical protein K11897 impF; type VI secretion system protein ImpF D dqs_4044 hypothetical protein K11897 impF; type VI secretion system protein ImpF D dqs_1424 hypothetical protein K11900 impC; type VI secretion system protein ImpC D dqs_4040 hypothetical protein K11900 impC; type VI secretion system protein ImpC D dqs_1423 hypothetical protein K11901 impB; type VI secretion system protein ImpB D dqs_4039 hypothetical protein K11901 impB; type VI secretion system protein ImpB D dqs_1430 hypothetical protein K11902 impA; type VI secretion system protein ImpA D dqs_4038 putative cytoplasmic protein K11902 impA; type VI secretion system protein ImpA D dqs_1425 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D dqs_4041 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D dqs_4042 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp D dqs_1427 Vgr related protein K11904 vgrG; type VI secretion system secreted protein VgrG D dqs_3613 Vgr-related protein K11904 vgrG; type VI secretion system secreted protein VgrG D dqs_4020 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D dqs_1420 hypothetical protein K11906 vasD; type VI secretion system protein VasD D dqs_4037 hypothetical protein K11906 vasD; type VI secretion system protein VasD D dqs_4047 putative ATP-dependent Clp protease, ATP-binding subunit ClpB K11907 vasG; type VI secretion system protein VasG D dqs_4033 hypothetical protein K11890 impM; type VI secretion system protein ImpM D dqs_4043 hypothetical protein K11898 impE; type VI secretion system protein ImpE D dqs_0964 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D dqs_2951 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D dqs_0975 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D dqs_3569 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D dqs_0974 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D dqs_1518 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D dqs_3536 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D dqs_3369 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D dqs_0841 signal recognition particle-docing protein FtsY K03110 ftsY; fused signal recognition particle receptor D dqs_0976 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D dqs_4132 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D dqs_3478 twin arginine translocase A K03116 tatA; sec-independent protein translocase protein TatA D dqs_3477 putative Sec-independent protein translocase K03117 tatB; sec-independent protein translocase protein TatB D dqs_3476 Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:aoa02042] D dqs_2022 hypothetical protein K10954 zot; zona occludens toxin D dqs_0985 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D dqs_0752 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:aoa02022] D dqs_0174 phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D dqs_0173 phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D dqs_2555 transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D dqs_1858 osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D dqs_1859 osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D dqs_0772 sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D dqs_0773 DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D dqs_3085 two component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D dqs_3086 two component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D dqs_2934 two component sensor protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D dqs_2935 two component system transcriptional regulatory protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D dqs_3818 two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D dqs_0276 two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D dqs_0064 two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator D dqs_1049 two-component response regulatory protein K02483 K02483; two-component system, OmpR family, response regulator D dqs_1053 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D dqs_3758 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D dqs_2880 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D dqs_0468 two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator D dqs_0763 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D dqs_3817 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D dqs_0277 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D dqs_0717 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D dqs_3114 putative two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D dqs_3106 putative two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D dqs_1627 putative two-component sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D dqs_3115 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D dqs_3105 two-component response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D dqs_0579 DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D dqs_1626 putative two-component response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D dqs_1091 putative alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D dqs_1092 alginate biosynthesis regulatory protein AlgR K08083 algR; two-component system, LytTR family, response regulator AlgR D dqs_0810 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D dqs_0809 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D dqs_4126 nitrogen regulation protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D dqs_4125 nitrogen assimilation regulatory protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D dqs_1992 transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D dqs_3496 two component system sensor protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D dqs_3495 two component system response regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D dqs_2903 putative two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D dqs_2905 putative two component transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D dqs_2070 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D dqs_2069 transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D dqs_0458 transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D dqs_3962 hydrogen uptake histidine-kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3] D dqs_3957 hydrogenase transcriptional regulatory protein K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA D dqs_0145 putative hybrid sensor and regulator protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D dqs_3635 putative sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D dqs_0082 putative sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D dqs_1575 chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_1585 chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_0418 putative chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_1574 putative chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_1583 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_2184 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_0421 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_4089 putative two component transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_1579 protein glutamate-methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D dqs_0413 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D dqs_1581 chemotaxis protein CheV-like K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D dqs_1582 chemotaxis protein CheV-like K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D dqs_3600 putative pilus biogenese protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D dqs_3596 pilus protein K02657 pilG; twitching motility two-component system response regulator PilG D dqs_3597 pilus protein K02658 pilH; twitching motility two-component system response regulator PilH D dqs_1614 polar differentiation response regulator K11443 divK; two-component system, cell cycle response regulator DivK D dqs_0990 two-component sensor kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3] D dqs_0989 two-component response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR D dqs_2818 putative sensor histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D dqs_2850 putative sensory box sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D dqs_2849 sigma-54 dependent response regulator K10943 flrC; two-component system, response regulator FlrC D dqs_0459 sensor histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3] D dqs_3831 response regulator K13815 rpfG; two-component system, response regulator RpfG D dqs_2492 putative sensor kinase/response regulator hybrid protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D dqs_3581 putative virulence regulator protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D dqs_4088 putative hybrid sensor and regulator protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D dqs_2546 putative sensor-regulator protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D dqs_2635 putative hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D dqs_2736 putative two-component hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:aoa02035] D dqs_1575 chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_1585 chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_0418 putative chemotaxis protein histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D dqs_1576 positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW D dqs_0416 positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW D dqs_0415 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D dqs_1578 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D dqs_0414 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D dqs_1579 protein glutamate-methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D dqs_0413 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D dqs_1574 putative chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_1583 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_2184 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_0421 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_4089 putative two component transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D dqs_1584 chemotaxis regulator CheZ K03414 cheZ; chemotaxis protein CheZ D dqs_1581 chemotaxis protein CheV-like K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D dqs_1582 chemotaxis protein CheV-like K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D dqs_3836 putative methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_0101 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0138 putative dipeptide chemoreceptor K03406 mcp; methyl-accepting chemotaxis protein D dqs_0139 putative aromatic hydrocarbon chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_1022 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_1220 putative aspartate chemoreceptor protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0417 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0420 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0555 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_0650 putative methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_1577 putative serine chemoreceptor protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_1580 methyl accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_2705 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D dqs_2401 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D dqs_4080 putative aerotaxis receptor K03776 aer; aerotaxis receptor D dqs_2332 aerotaxis receptor K03776 aer; aerotaxis receptor D dqs_1492 putative aerotaxis receptor protein K03776 aer; aerotaxis receptor D dqs_2853 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D dqs_2854 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D dqs_2855 putative flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D dqs_2860 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D dqs_2861 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D dqs_2862 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D dqs_2863 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D dqs_1215 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D dqs_1214 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D dqs_2852 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D dqs_2858 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D dqs_2859 flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D dqs_2851 flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D dqs_2868 flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D dqs_2876 chaperon for flagellar basal body P-ring formation K02386 flgA; flagellar basal body P-ring formation protein FlgA D dqs_2869 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D dqs_2857 putative flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D dqs_2848 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D dqs_2856 putative flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D dqs_2875 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D dqs_2874 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D dqs_2873 basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D dqs_2871 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D dqs_2870 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D dqs_2867 peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ D dqs_2872 FlgE protein K02390 flgE; flagellar hook protein FlgE D dqs_2866 flagellar hook-filament junction protein 1 K02396 flgK; flagellar hook-associated protein 1 D dqs_2865 flagellar hook-filament junction protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D dqs_2878 putative flagellar synthesis chaperone K02399 flgN; flagellar biosynthesis protein FlgN D dqs_2690 putative flagellin K02406 fliC; flagellin D dqs_2828 flagellin K02406 fliC; flagellin D dqs_2839 flagellin K02406 fliC; flagellin D dqs_2841 flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2 D dqs_2842 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D dqs_2843 flagellar-like protein FliT K02423 fliT; flagellar protein FliT D dqs_1570 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D dqs_1571 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D dqs_1218 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D dqs_1572 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D dqs_1219 flagellar motor protein K02556 motA; chemotaxis protein MotA D dqs_1573 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D dqs_1221 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D dqs_2850 putative sensory box sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D dqs_2849 sigma-54 dependent response regulator K10943 flrC; two-component system, response regulator FlrC D dqs_0486 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW D dqs_2877 putative negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D dqs_2840 flagellar protein K06603 flaG; flagellar protein FlaG D dqs_1216 flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF D dqs_1217 flagellar-like protein FleN K04562 flhG; flagellar biosynthesis protein FlhG D dqs_3596 pilus protein K02657 pilG; twitching motility two-component system response regulator PilG D dqs_3597 pilus protein K02658 pilH; twitching motility two-component system response regulator PilH D dqs_3598 pilus biogenesis protein K02659 pilI; twitching motility protein PilI D dqs_3599 pilus biogenesis protein K02660 pilJ; twitching motility protein PilJ D dqs_3600 putative pilus biogenese protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D dqs_3495 two component system response regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D dqs_3496 two component system sensor protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D dqs_3611 twitching motility protein K02669 pilT; twitching motility protein PilT D dqs_3612 twitching motility protein K02670 pilU; twitching motility protein PilU D dqs_2710 twitching motility protein K02670 pilU; twitching motility protein PilU D dqs_2161 twitching motility protein K02670 pilU; twitching motility protein PilU D dqs_3494 pilin domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D dqs_3371 pilus biogenesis protein K02652 pilB; type IV pilus assembly protein PilB D dqs_0873 general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB D dqs_3372 type 4 pilus biogenesis protein K02653 pilC; type IV pilus assembly protein PilC D dqs_0872 general secretion pathway protein F K02653 pilC; type IV pilus assembly protein PilC D dqs_3373 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D dqs_0997 putative type 4 pilus biogenesis protein K02656 pilF; type IV pilus assembly protein PilF D dqs_3791 type 4 fimbrial biogenesis protein K02666 pilQ; type IV pilus assembly protein PilQ D dqs_3792 putative type 4 fimbrial biogenesis protein K02665 pilP; type IV pilus assembly protein PilP D dqs_3793 type 4 fimbrial biogenesis protein K02664 pilO; type IV pilus assembly protein PilO D dqs_3794 type 4 fimbrial biogenesis protein K02663 pilN; type IV pilus assembly protein PilN D dqs_3795 type 4 fimbrial biogenesis protein K02662 pilM; type IV pilus assembly protein PilM D dqs_1720 type IV pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D dqs_2311 type 4 fimbrial biogenesis relatedtransmembrane protein K02671 pilV; type IV pilus assembly protein PilV D dqs_3054 putative prepilin-like protein K02671 pilV; type IV pilus assembly protein PilV D dqs_3055 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D dqs_2310 putative type 4 pilus biogenesis protein K02672 pilW; type IV pilus assembly protein PilW D dqs_3056 putative Tfp pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D dqs_2308 putative type 4 pilus biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1 D dqs_3057 putative Tfp pilus assembly protein K02674 pilY1; type IV pilus assembly protein PilY1 D dqs_3058 putative prepilin like protein K02655 pilE; type IV pilus assembly protein PilE D dqs_2313 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:aoa04812] D dqs_1830 hypothetical protein K06990 MEMO1; MEMO1 family protein D dqs_0183 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D dqs_0960 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D dqs_0959 cell division protein FtsA K03590 ftsA; cell division protein FtsA D dqs_1806 putative cell division inhibitor K03610 minC; septum site-determining protein MinC D dqs_1805 putative septum site-determining protein K03609 minD; septum site-determining protein MinD D dqs_1804 putative cell division topological specificity factor K03608 minE; cell division topological specificity factor D dqs_3349 ParA family protein K03496 parA; chromosome partitioning protein D dqs_0152 ParA family protein K03496 parA; chromosome partitioning protein D dqs_0355 ParA family protein K03496 parA; chromosome partitioning protein D dqs_3578 hypothetical protein K03496 parA; chromosome partitioning protein D dqs_0155 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:aoa04147] D dqs_1549 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D dqs_2277 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D dqs_2976 putative glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D dqs_2978 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D dqs_2981 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D dqs_1165 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D dqs_2496 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1048 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1338 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D dqs_1171 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D dqs_1642 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D dqs_2471 putative gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D dqs_1703 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D dqs_3558 elongation factor Tu K02358 tuf; elongation factor Tu D dqs_3571 elongation factor Tu K02358 tuf; elongation factor Tu D dqs_1622 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D dqs_3304 putative long chain fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_3590 putative Acetyl-coenzyme A synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_1141 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D dqs_2305 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_2650 putative beta-ketoadipyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0404 acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0475 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D dqs_0656 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D dqs_1596 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D dqs_1090 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D dqs_2319 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D dqs_1042 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D dqs_1875 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D dqs_1945 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D dqs_2886 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D dqs_3146 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D dqs_2960 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D dqs_1308 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D dqs_2429 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D dqs_3999 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D dqs_3230 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D dqs_3034 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D dqs_1640 putative metalloprotease K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D dqs_1493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_1680 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D dqs_2644 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D dqs_1850 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D dqs_2076 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D dqs_2937 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D dqs_3142 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D dqs_1517 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D dqs_2947 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:aoa02048] D dqs_0006 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D dqs_0005 restriction modification system DNA specificity domain-containing protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D dqs_0004 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D dqs_3908 modification methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D dqs_0019 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D dqs_1026 hypothetical protein K07448 mrr; restriction system protein D dqs_1058 Plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D dqs_1057 antitoxin K18923 stbD; antitoxin StbD D dqs_1299 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D dqs_1300 transcription regulator protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D dqs_2004 hypothetical protein K07341 doc; death on curing protein D dqs_0366 transcriptional regulator, Xre family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D dqs_3941 hypothetical protein K21498 higA-1; antitoxin HigA-1 D dqs_0960 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D dqs_0183 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D dqs_1223 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D dqs_1226 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D dqs_1602 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D dqs_1676 hypothetical protein K09159 cptB; antitoxin CptB D dqs_0562 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2171 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D dqs_2172 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:aoa01504] D dqs_3085 two component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D dqs_3086 two component response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D dqs_3267 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_0258 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_2713 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D dqs_3266 RND efflux transporter permease K18138 acrB; multidrug efflux pump D dqs_0259 RND efflux transporter permease K18138 acrB; multidrug efflux pump D dqs_0260 RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system D dqs_3052 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D dqs_0679 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D dqs_0917 membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system D dqs_0918 RND efflux transporter permease K18303 mexK; multidrug efflux pump D dqs_1601 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D dqs_0921 putative outer membrane efflux protein K12340 tolC; outer membrane protein D dqs_2728 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D dqs_2729 membrane fusion protein K18901 bpeE; membrane fusion protein, multidrug efflux system D dqs_2730 RND efflux transporter permease K18902 bpeF; multidrug efflux pump D dqs_2731 outer membrane efflux protein K18903 oprC; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:aoa00537] D dqs_3999 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:aoa03100] D dqs_0200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_0794 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_1133 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_1405 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_1130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_1503 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_3330 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D dqs_3319 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D dqs_0197 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D dqs_2232 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D dqs_1470 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D dqs_1733 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D dqs_1734 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D dqs_1132 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D dqs_1135 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D dqs_1776 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D dqs_0830 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D dqs_1134 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D dqs_1131 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D dqs_1777 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D dqs_3573 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D dqs_3934 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D dqs_1775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D dqs_2231 tRNA-His K14226 tRNA-His; tRNA His D dqs_0793 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D dqs_1404 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D dqs_0199 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D dqs_3331 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D dqs_1519 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_1012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_2024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_0980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_1781 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_1011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D dqs_0422 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D dqs_0640 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D dqs_2750 tRNA-Met K14230 tRNA-Met; tRNA Met D dqs_0846 tRNA-Met K14230 tRNA-Met; tRNA Met D dqs_1054 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D dqs_1116 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D dqs_1196 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D dqs_2233 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D dqs_2421 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D dqs_1211 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D dqs_1448 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D dqs_3246 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D dqs_2821 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D dqs_1305 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D dqs_3572 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D dqs_3570 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D dqs_3574 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D dqs_2195 tRNA-Val K14237 tRNA-Val; tRNA Val D dqs_2197 tRNA-Val K14237 tRNA-Val; tRNA Val D dqs_1187 tRNA-Val K14237 tRNA-Val; tRNA Val D dqs_2196 tRNA-Val K14237 tRNA-Val; tRNA Val D dqs_0198 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_0792 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_1403 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_3332 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D dqs_0201 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_3329 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_1406 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_0795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D dqs_0202 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D dqs_0796 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D dqs_1407 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D dqs_3328 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D dqs_0203 short chain dehydrogenase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320] D dqs_3776 2,5-diketo-D-gluconate reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D dqs_1662 putative acetion dehydrogenase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D dqs_4011 acetoin dehydrogenase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D dqs_1663 acetoin dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D dqs_4012 acetoin dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D dqs_2983 putative quinoprotein ethanol dehydrogenase K20936 bdh; 1-butanol dehydrogenase (cytochrome c) [EC:1.1.2.9] D dqs_3107 ExaA2 protein K20937 boh; 1-butanol dehydrogenase (quinone) [EC:1.1.5.11] D dqs_1368 hypothetical protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D dqs_3157 putative quinoprotein ethanol dehydrogenase K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1] D dqs_2135 indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D dqs_2136 putative indolepyruvate oxidoreductase subunit B K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D dqs_2550 2-oxoacid ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D dqs_3576 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D dqs_1302 pyrroloquinoline quinone biosynthesis protein PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D dqs_0031 isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D dqs_0032 putative isoquinoline 1-oxidoreductase subunit beta K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D dqs_2284 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D dqs_3144 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D dqs_2938 electron-transferring-flavoprotein dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D dqs_0536 type A flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4] D dqs_3176 NADPH quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D dqs_3346 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D dqs_3509 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D dqs_0845 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D dqs_2815 cytochrome c family protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D dqs_3458 putative peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D dqs_2303 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D dqs_0501 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D dqs_3685 glutathione transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D dqs_2925 putative sulfite oxidase subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D dqs_1394 putative cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D dqs_2721 putative cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D dqs_2330 putative bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D dqs_2189 putative bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D dqs_2473 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D dqs_0115 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D dqs_2809 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D dqs_0844 alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D dqs_2549 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D dqs_2706 putative iron-dependent peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D dqs_1539 hydrogen dehydrogenase subunit beta K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2] D dqs_1536 hydrogen dehydrogenase subunit alpha K18005 hoxF; [NiFe] hydrogenase diaphorase moiety large subunit [EC:1.12.1.2] D dqs_1537 hydrogen dehydrogenase subunit gamma K18006 hoxU; [NiFe] hydrogenase diaphorase moiety small subunit [EC:1.12.1.2] D dqs_1538 hydrogen dehydrogenase subunit delta K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2] D dqs_3100 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D dqs_3508 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D dqs_3127 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D dqs_2515 cysteine dioxygenase type I K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91] D dqs_0677 putative hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D dqs_2667 lysine/ornithine N-monooxygenase K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252] D dqs_2040 putative oxidoreductase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1] D dqs_1395 ferredoxin-NADP+ reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D dqs_2803 ferredoxin-NADP+ reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D dqs_2193 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D dqs_2481 putative arsenate reductase (glutaredoxin) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D dqs_2483 putative arsenate reductase (glutaredoxin) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D dqs_1304 pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D dqs_1826 putative pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D dqs_0919 putative protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D dqs_1198 L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D dqs_3449 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D dqs_1030 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D dqs_2789 trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D dqs_3722 putative carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D dqs_1954 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D dqs_0354 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D dqs_0852 putative apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D dqs_2341 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D dqs_1202 hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D dqs_2342 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D dqs_3399 glycosyltransferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D dqs_0547 putative NAD(+)-dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37] D dqs_3504 putative molybdenum transport protein K03813 modD; molybdenum transport protein [EC:2.4.2.-] D dqs_0695 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D dqs_2510 ApbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D dqs_3905 putative thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D dqs_2301 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D dqs_2970 hypothetical protein K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D dqs_1413 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D dqs_3928 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D dqs_2773 GAF/GGDEF-domain-containing protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D dqs_1697 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D dqs_2639 putative phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D dqs_1256 bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D dqs_0511 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D dqs_1612 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D dqs_2283 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D dqs_0432 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D dqs_2247 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D dqs_1411 putative phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D dqs_2593 putative two component response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D dqs_2637 putative response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D dqs_3895 HD-domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D dqs_1721 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D dqs_1847 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D dqs_0540 ADP-ribosyl K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24] D dqs_1927 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D dqs_0602 hypothetical protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D dqs_0109 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D dqs_3753 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D dqs_1415 carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D dqs_1744 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D dqs_1204 MoxR protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D dqs_3001 MoxR protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D dqs_2542 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D dqs_1361 mandelate racemase K22209 tarD; D(-)-tartrate dehydratase [EC:4.2.1.81] D dqs_2205 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D dqs_0766 methylmalonyl-coa mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13] D dqs_2652 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D dqs_0939 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D dqs_3262 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D dqs_0524 electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D dqs_1562 putative electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D dqs_0525 electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D dqs_1563 electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D dqs_0526 electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D dqs_1564 electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D dqs_1460 putative cation-transporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D dqs_1277 hypothetical protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D dqs_1275 iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D dqs_1276 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D dqs_3631 putative formate dehydrogenase accessory protein K02379 fdhD; FdhD protein D dqs_1139 ferredoxin K05524 fdxA; ferredoxin D dqs_0523 electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D dqs_1561 putative electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D dqs_0522 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D dqs_1560 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D dqs_0527 electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D dqs_1565 electron transport complex promplex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D dqs_2170 scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins D dqs_0563 nitrogen fixation protein NifU K13819 K13819; NifU-like protein D dqs_0539 putative NifQ protein K15790 nifQ; nitrogen fixation protein NifQ D dqs_3228 nitric-oxide reductase accessory cytoplasmic protein K02448 norD; nitric oxide reductase NorD protein D dqs_3226 nitric-oxide reductase K04748 norQ; nitric oxide reductase NorQ protein D dqs_4086 periplasmic nitrate reductase subunit NapD K02570 napD; periplasmic nitrate reductase NapD D dqs_0741 putative NapD protein K02570 napD; periplasmic nitrate reductase NapD D dqs_4087 ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF D dqs_0742 putative periplasmic nitrate reductase accessory protein NapE K02571 napE; periplasmic nitrate reductase NapE D dqs_0570 NifX protein K02596 nifX; nitrogen fixation protein NifX D dqs_0553 NifY protein K02596 nifX; nitrogen fixation protein NifX D dqs_0551 nitrogen fixation protein NifT K02593 nifT; nitrogen fixation protein NifT D dqs_0557 nitrogen fixation protein K02597 nifZ; nitrogen fixation protein NifZ D dqs_3506 putative NifZ protein K02597 nifZ; nitrogen fixation protein NifZ D dqs_0533 nitrogen fixation protein K02585 nifB; nitrogen fixation protein NifB D dqs_0571 nitrogenase molybdenum-cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN D dqs_0572 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D dqs_2413 flavodoxin FldA K03839 fldA; flavodoxin I D dqs_0024 flavodoxin FldA K03839 fldA; flavodoxin I D dqs_1028 flavodoxin K03839 fldA; flavodoxin I D dqs_4081 cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC D dqs_0738 cytochrome C-type protein NapC K02569 napC; cytochrome c-type protein NapC D dqs_4084 quinol dehydrogenase periplasmic protein K02573 napG; ferredoxin-type protein NapG D dqs_4083 quinol dehydrogenase membrane protein K02574 napH; ferredoxin-type protein NapH D dqs_2645 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D dqs_1849 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D dqs_2077 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D dqs_2936 protein fixA K03521 fixA; electron transfer flavoprotein beta subunit D dqs_3141 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D dqs_2939 Ferredoxin-like protein K03855 fixX; ferredoxin like protein D dqs_0558 nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein D dqs_1827 Nitrogen-fixation sustaining protein CowN K21694 cowN; N(2)-fixation sustaining protein CowN D dqs_1378 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism D dqs_2432 acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D dqs_3368 hypothetical protein K06203 cysZ; CysZ protein D dqs_3610 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D dqs_1182 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D dqs_1183 tetratricopeptide repeat protein K19804 lapB; lipopolysaccharide assembly protein B D dqs_0253 hypothetical protein K21687 rpfA; resuscitation-promoting factor RpfA C 99987 Cofactor metabolism D dqs_1097 HemY protein K02498 hemY; HemY protein D dqs_0389 putative ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D dqs_0170 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D dqs_3888 putative secreted protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D dqs_0384 hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D dqs_1684 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D dqs_3634 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D dqs_3124 chromate reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D dqs_2995 hypothetical protein K15977 K15977; putative oxidoreductase D dqs_3101 hypothetical protein K15977 K15977; putative oxidoreductase D dqs_2998 carboxylesterase K06999 K06999; phospholipase/carboxylesterase D dqs_1811 hypothetical protein K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D dqs_2764 cold shock-like protein K03704 cspA; cold shock protein D dqs_1245 cold-shock protein K03704 cspA; cold shock protein D dqs_2253 cold shock-like protein K03704 cspA; cold shock protein D dqs_3890 PII-like signal transmitter protein GlnK K04752 glnK; nitrogen regulatory protein P-II 2 D dqs_1809 transcription accessory protein K06959 tex; protein Tex C 99974 Translation D dqs_3050 ABC transporter permease and ATP-binding protein K13926 rbbA; ribosome-dependent ATPase D dqs_3427 RNA procession exonuclease K07576 K07576; metallo-beta-lactamase family protein D dqs_0454 beta-lactamase K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D dqs_1244 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D dqs_2201 trigger factor K03545 tig; trigger factor D dqs_2926 hypothetical protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D dqs_3646 urease accessory protein UreE K03187 ureE; urease accessory protein D dqs_3645 urease accessory protein UreF K03188 ureF; urease accessory protein D dqs_3644 urease accessory protein UreG K03189 ureG; urease accessory protein D dqs_3651 putative urease accessory protein UreD K03190 ureD; urease accessory protein D dqs_1699 SsrA-binding protein K03664 smpB; SsrA-binding protein D dqs_3945 putative hydrogenase expression/formation protein hupF K04653 hypC; hydrogenase expression/formation protein HypC D dqs_3954 hydrogenase assembly chaperon HypC K04653 hypC; hydrogenase expression/formation protein HypC D dqs_3955 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D dqs_3956 hydrogenase expression/formation protein hypE K04655 hypE; hydrogenase expression/formation protein HypE D dqs_3953 hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D dqs_3887 hypothetical protein K07391 comM; magnesium chelatase family protein D dqs_2719 hypothetical protein K07395 K07395; putative proteasome-type protease D dqs_2896 hypothetical protein K07397 yhfA; putative redox protein D dqs_2346 putative xanthine dehydrogenase K07402 xdhC; xanthine dehydrogenase accessory factor D dqs_0033 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D dqs_1445 hypothetical protein K07454 K07454; putative restriction endonuclease D dqs_1248 DNA repair protein RadC K03630 radC; DNA repair protein RadC D dqs_2922 putative RumC-like protein K09760 rmuC; DNA recombination protein RmuC D dqs_0942 hypothetical protein K07460 yraN; putative endonuclease D dqs_0107 putative DNA processing protein DrpA K04096 smf; DNA processing protein D dqs_1489 recombination factor protein RarA K07478 ycaJ; putative ATPase D dqs_1186 hypothetical protein K07501 K07501; 3'-5' exonuclease D dqs_1077 transposase B K07497 K07497; putative transposase D dqs_1078 transposase A K07497 K07497; putative transposase D dqs_0585 MuA-transposase/repressor protein CI, DNA-binding K07497 K07497; putative transposase D dqs_0011 hypothetical protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D dqs_1032 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D dqs_3451 putative symporter protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D dqs_2267 putative phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D dqs_0387 sodium/solute symporter transmembrane protein K03307 TC.SSS; solute:Na+ symporter, SSS family C 99978 Cell growth D dqs_1856 intracellular septation protein A K06190 ispZ; intracellular septation protein D dqs_2204 SpoVR family protein K06415 spoVR; stage V sporulation protein R D dqs_2946 hypothetical protein K22719 envC; murein hydrolase activator C 99993 Cell motility D dqs_2424 DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D dqs_2824 hypothetical protein K03607 proQ; ProP effector D dqs_2154 GTP-binding elongation factor K06207 typA; GTP-binding protein D dqs_3233 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D dqs_4028 regulatory protein K07169 K07169; FHA domain-containing protein D dqs_0849 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D dqs_2331 putative PhoH-related protein K07175 phoH2; PhoH-like ATPase D dqs_2202 PrkA protein K07180 prkA; serine protein kinase D dqs_2334 putative nucleotidyltransferase K07182 K07182; CBS domain-containing protein D dqs_2316 putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein D dqs_0528 nitrogen fixation regulatory protein K23916 nifL; nitrogen fixation regulatory protein C 99992 Structural proteins D dqs_1488 putative outer membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein D dqs_0832 outer membrane lipoprotein K02494 lolB; outer membrane lipoprotein LolB D dqs_0879 putative surface lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D dqs_0929 putative outer membrane protein SlyB K06077 slyB; outer membrane lipoprotein SlyB D dqs_2055 outer membrane protein K06142 hlpA; outer membrane protein D dqs_1199 lipoprotein K06194 nlpD; lipoprotein NlpD D dqs_3892 outer membrane protein K07275 ompW; outer membrane protein D dqs_3992 outer membrane protein K07290 yhjG; AsmA family protein D dqs_2399 hypothetical protein K07340 ybbJ; inner membrane protein D dqs_3051 membrane fusion protein K01993 ABC-2.TX; HlyD family secretion protein D dqs_0906 membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein D dqs_0771 hypothetical protein K06143 creD; inner membrane protein D dqs_4075 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D dqs_4071 cytochrome c-type biogenesis protein CycH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D dqs_4072 cytochrome C-type biogenesis protein CycL K02200 ccmH; cytochrome c-type biogenesis protein CcmH D dqs_2371 putative surface polysaccharide polymerase K13662 gumE; putative polymerase D dqs_0998 transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D dqs_2966 phosphate uptake regulator K02039 phoU; phosphate transport system protein D dqs_0686 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D dqs_0335 divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D dqs_0971 ApaG protein K06195 apaG; ApaG protein D dqs_3797 putative CyaY protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY D dqs_1222 putative hemerythrin-like protein K07216 hr; hemerythrin D dqs_3909 hypothetical protein K07216 hr; hemerythrin D dqs_3910 hemerythrin family protein K07216 hr; hemerythrin D dqs_1040 cation-binding hemerythrin HHE family protein K07216 hr; hemerythrin D dqs_0545 putative hemerythrin-like protein K07216 hr; hemerythrin D dqs_3241 putative copper transport system periplasmic-binding protein K07218 nosD; nitrous oxidase accessory protein D dqs_3985 putative molybdenum-binding protein K07219 K07219; putative molybdopterin biosynthesis protein D dqs_3633 hypothetical protein K07219 K07219; putative molybdopterin biosynthesis protein D dqs_2561 putative heme-Cu-containing membrane protein K07234 K07234; uncharacterized protein involved in response to NO D dqs_3238 putative NosL protein K19342 nosL; copper chaperone NosL D dqs_3237 hypothetical protein K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D dqs_1160 putative colicin V production protein K03558 cvpA; membrane protein required for colicin V production D dqs_4116 hypothetical protein K03791 K03791; putative chitinase D dqs_0311 phenyl acetic acid degradation protein K02617 paaY; phenylacetic acid degradation protein D dqs_1914 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein D dqs_1301 pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D dqs_1303 PqqD protein K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D dqs_1857 globin-like protein K06886 glbN; hemoglobin D dqs_0079 globin-like protein K06886 glbN; hemoglobin D dqs_0892 hypothetical protein K07001 K07001; NTE family protein D dqs_1128 esterase K07001 K07001; NTE family protein D dqs_0345 putative esterase K07001 K07001; NTE family protein D dqs_0346 putative esterase K07001 K07001; NTE family protein D dqs_2958 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D dqs_2893 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D dqs_0217 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D dqs_3196 exoribonuclease II K07058 K07058; membrane protein D dqs_3297 exoribonuclease II K07058 K07058; membrane protein D dqs_1967 exoribonuclease II K07058 K07058; membrane protein D dqs_1825 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D dqs_2800 lactoylglutathione lyase K04750 phnB; PhnB protein D dqs_1909 hypothetical protein K02351 K02351; putative membrane protein D dqs_3315 hypothetical protein K03744 lemA; LemA protein D dqs_1377 LemA family protein K03744 lemA; LemA protein D dqs_1365 hypothetical protein K03745 slyX; SlyX protein D dqs_0106 hypothetical protein K03747 smg; Smg protein D dqs_2823 hypothetical protein K05805 creA; CreA protein D dqs_1159 hypothetical protein K03749 dedD; DedD protein D dqs_0994 DedA protein K03975 dedA; membrane-associated protein D dqs_2744 hypothetical protein K08972 K08972; putative membrane protein D dqs_0543 hypothetical protein K08984 yjdF; putative membrane protein D dqs_1940 hypothetical protein K08995 K08995; putative membrane protein D dqs_1982 hypothetical protein K08995 K08995; putative membrane protein D dqs_0347 hypothetical protein K08995 K08995; putative membrane protein D dqs_1655 hypothetical protein K09858 K09858; SEC-C motif domain protein D dqs_0310 hypothetical protein K11312 K11312; cupin 2 domain-containing protein D dqs_3947 hydrogenase-1 operon protein hupH K03618 hyaF; hydrogenase-1 operon protein HyaF D dqs_3946 hydrogenase-1 operon protein hyaE K03619 hyaE; hydrogenase-1 operon protein HyaE D dqs_1433 putative phosphonoacetate hydrolase K06193 phnA; protein PhnA C 99997 Function unknown D dqs_1722 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D dqs_1355 putative qinohemoprotein amine dehydrogenase K06871 K06871; uncharacterized protein D dqs_1376 hypothetical protein K06872 K06872; uncharacterized protein D dqs_3387 hypothetical protein K06889 K06889; uncharacterized protein D dqs_0801 ATPase family protein K06923 K06923; uncharacterized protein D dqs_0818 hypothetical protein K06929 K06929; uncharacterized protein D dqs_0407 hypothetical protein K06938 K06938; uncharacterized protein D dqs_0408 hypothetical protein K06938 K06938; uncharacterized protein D dqs_0782 hypothetical protein K06940 K06940; uncharacterized protein D dqs_1648 hypothetical protein K06940 K06940; uncharacterized protein D dqs_1649 ferredoxin K06940 K06940; uncharacterized protein D dqs_3497 hypothetical protein K06950 K06950; uncharacterized protein D dqs_0457 hypothetical protein K06953 K06953; uncharacterized protein D dqs_3447 amine oxidoreductase K06954 K06954; uncharacterized protein D dqs_1936 hypothetical protein K06986 K06986; uncharacterized protein D dqs_3163 peptidase K06992 K06992; uncharacterized protein D dqs_0221 hypothetical protein K06995 K06995; uncharacterized protein D dqs_3833 hypothetical protein K06995 K06995; uncharacterized protein D dqs_3214 hypothetical protein K06996 K06996; uncharacterized protein D dqs_0780 hypothetical protein K07000 K07000; uncharacterized protein D dqs_2384 RND efflux transporter K07003 K07003; uncharacterized protein D dqs_0047 RND efflux transporter K07003 K07003; uncharacterized protein D dqs_1989 transporter K07003 K07003; uncharacterized protein D dqs_2106 hypothetical protein K07003 K07003; uncharacterized protein D dqs_1607 putative extracellular nuclease K07004 K07004; uncharacterized protein D dqs_0124 hypothetical protein K07006 K07006; uncharacterized protein D dqs_0374 hypothetical protein K07018 K07018; uncharacterized protein D dqs_2912 hypothetical protein K07019 K07019; uncharacterized protein D dqs_2613 hypothetical protein K07032 K07032; uncharacterized protein D dqs_3866 hypothetical protein K07032 K07032; uncharacterized protein D dqs_1647 hypothetical protein K07039 K07039; uncharacterized protein D dqs_0158 putative mannonate dehydratase K07045 K07045; uncharacterized protein D dqs_0761 metallopeptidase K07054 K07054; uncharacterized protein D dqs_0300 hypothetical protein K07064 K07064; uncharacterized protein D dqs_0153 nucleotidyltransferase K07075 K07075; uncharacterized protein D dqs_2073 hypothetical protein K07080 K07080; uncharacterized protein D dqs_1604 hypothetical protein K07086 K07086; uncharacterized protein D dqs_4130 hypothetical protein K07090 K07090; uncharacterized protein D dqs_2629 permease K07090 K07090; uncharacterized protein D dqs_3785 hypothetical protein K07090 K07090; uncharacterized protein D dqs_1268 hypothetical protein K07090 K07090; uncharacterized protein D dqs_0444 hypothetical protein K07090 K07090; uncharacterized protein D dqs_0705 hypothetical protein K07090 K07090; uncharacterized protein D dqs_2228 hypothetical protein K07093 K07093; uncharacterized protein D dqs_2501 membrane protein K07112 K07112; uncharacterized protein D dqs_0423 hypothetical protein K07112 K07112; uncharacterized protein D dqs_0544 hypothetical protein K07126 K07126; uncharacterized protein D dqs_1624 hypothetical protein K07126 K07126; uncharacterized protein D dqs_2068 hypothetical protein K07137 K07137; uncharacterized protein D dqs_3965 ATP-dependent protease La K07157 K07157; uncharacterized protein D dqs_4133 hypothetical protein K08998 K08998; uncharacterized protein D dqs_1213 hypothetical protein K09005 K09005; uncharacterized protein D dqs_2596 hypothetical protein K09117 K09117; uncharacterized protein D dqs_3607 hypothetical protein K09131 K09131; uncharacterized protein D dqs_1829 hypothetical protein K09141 K09141; uncharacterized protein D dqs_0191 hypothetical protein K09158 K09158; uncharacterized protein D dqs_1284 hypothetical protein K09161 K09161; uncharacterized protein D dqs_3448 hypothetical protein K09701 K09701; uncharacterized protein D dqs_1385 hypothetical protein K09749 K09749; uncharacterized protein D dqs_2357 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D dqs_1855 YciI-like protein K09780 K09780; uncharacterized protein D dqs_2095 hypothetical protein K09781 K09781; uncharacterized protein D dqs_2203 hypothetical protein K09786 K09786; uncharacterized protein D dqs_1594 hypothetical protein K09791 K09791; uncharacterized protein D dqs_1475 hypothetical protein K09792 K09792; uncharacterized protein D dqs_0521 hypothetical protein K09801 K09801; uncharacterized protein D dqs_1701 hypothetical protein K09801 K09801; uncharacterized protein D dqs_2042 hypothetical protein K09861 K09861; uncharacterized protein D dqs_0803 hypothetical protein K09862 K09862; uncharacterized protein D dqs_0696 hypothetical protein K09915 K09915; uncharacterized protein D dqs_1481 hypothetical protein K09919 K09919; uncharacterized protein D dqs_0663 3',5'-cyclic-nucleotide phosphodiesterase K09921 K09921; uncharacterized protein D dqs_3274 hypothetical protein K09922 K09922; uncharacterized protein D dqs_1467 hypothetical protein K09926 K09926; uncharacterized protein D dqs_1634 hypothetical protein K09928 K09928; uncharacterized protein D dqs_2994 hypothetical protein K09929 K09929; uncharacterized protein D dqs_2993 hypothetical protein K09930 K09930; uncharacterized protein D dqs_2571 hypothetical protein K09932 K09932; uncharacterized protein D dqs_0070 hypothetical protein K09934 K09934; uncharacterized protein D dqs_1008 hypothetical protein K09937 K09937; uncharacterized protein D dqs_2772 hypothetical protein K09939 K09939; uncharacterized protein D dqs_3264 hypothetical protein K09941 K09941; uncharacterized protein D dqs_4005 hypothetical protein K09954 K09954; uncharacterized protein D dqs_3078 hypothetical protein K09959 K09959; uncharacterized protein D dqs_2419 hypothetical protein K09966 K09966; uncharacterized protein D dqs_3143 hypothetical protein K09975 K09975; uncharacterized protein D dqs_1553 hypothetical protein K09989 K09989; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024