+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Aspergillus oryzae
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D AO090012000434 rRNA methyltransferase NOP1 K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D AO090005001291 unnamed protein product; ribosome biogenesis protein - Nop56p/Sik1p K14564 NOP56; nucleolar protein 56
D AO090012000796 unnamed protein product; ribosome biogenesis protein - Nop58p/Nop5p K14565 NOP58; nucleolar protein 58
D AO090001000712 small nucleolar ribonucleoprotein SNU13 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
C Box H/ACA snoRNPs
D AO090009000691 unnamed protein product; pseudouridine synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D AO090009000202 unnamed protein product; H/ACA small nucleolar RNP component GAR1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D AO090012000488 unnamed protein product; uncharacterized conserved protein K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D AO090011000872 unnamed protein product; U3 small nucleolar ribonucleoprotein (snoRNP) component K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D AO090012000583 unnamed protein product; U3 small nucleolar ribonucleoprotein (snoRNP) component K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D AO090672000008 unnamed protein product; U3 small nucleolar ribonucleoprotein (snoRNP) subunit - Mpp10p K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D AO090103000410 unnamed protein product; protein involved in rRNA processing K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5
D AO090038000597 RRP7 superfamily domain-containing protein K14545 RRP7; ribosomal RNA-processing protein 7
D AO090102000512 unnamed protein product; WD40-repeat-containing subunit of the 18S rRNA processing complex K14558 PWP2; periodic tryptophan protein 2
D AO090103000037 unnamed protein product; nucleolar protein involved in 40S ribosome biogenesis K14766 NOP14; nucleolar protein 14
D AO090038000291 unnamed protein product; predicted protein K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D AO090005001519 unnamed protein product; WD40 repeat protein K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D AO090003001155 unnamed protein product; predicted protein K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D AO090005001275 unnamed protein product; HAT (Half-A-TPR) repeat-containing protein K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D AO090026000345 unnamed protein product; WD40-repeat-containing subunit of the 18S rRNA processing complex K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D AO090003000462 unnamed protein product; uncharacterized conserved protein K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D AO090003000478 unnamed protein product; predicted protein K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D AO090005000824 unnamed protein product; WD40-repeat-containing subunit of the 18S rRNA processing complex K14556 DIP2; U3 small nucleolar RNA-associated protein 12
D AO090023000821 unnamed protein product; WD40-repeat-containing subunit of the 18S rRNA processing complex K14555 UTP13; U3 small nucleolar RNA-associated protein 13
D AO090003000924 unnamed protein product; uncharacterized conserved protein K14567 UTP14; U3 small nucleolar RNA-associated protein 14
D AO090011000424 unnamed protein product; conserved WD40 repeat-containing protein K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D AO090026000434 unnamed protein product; predicted protein K14770 BUD21; U3 small nucleolar RNA-associated protein 16
D AO090311000002 unnamed protein product; WD40 repeat protein K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
D AO090001000711 unnamed protein product; WD40 repeat protein K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D AO090005000605 unnamed protein product; predicted nucleolar protein involved in ribosome biogenesis K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D AO090003000101 unnamed protein product; DRIM (Down-regulated in metastasis)-like proteins K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D AO090124000091 unnamed protein product; WD repeat protein K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D AO090020000020 unnamed protein product; nucleolar RNA-associated protein (NRAP) K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D AO090005000831 unnamed protein product; uncharacterized proteins of PilT N-term./Vapc superfamily K14773 UTP23; U3 small nucleolar RNA-associated protein 23
D AO090113000085 unnamed protein product; predicted nucleic-acid-binding protein, contains PIN domain K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D AO090005001591 unnamed protein product; uncharacterized conserved protein K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D AO090005000411 unnamed protein product; uncharacterized conserved protein K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D AO090023000510 unnamed protein product; RNA Helicase K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D AO090009000242 unnamed protein product; ATP-dependent RNA helicase pitchoune K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D AO090001000428 unnamed protein product; ATP-dependent RNA helicase K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D AO090003000634 unnamed protein product; ATP-dependent RNA helicase K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
D AO090005001076 unnamed protein product; ATP-dependent RNA helicase K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D AO090026000664 unnamed protein product; mRNA splicing factor ATP-dependent RNA helicase K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D AO090701000118 unnamed protein product; DEAH-box RNA helicase K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D AO090011000771 unnamed protein product; DEAH-box RNA helicase K14781 DHR2; ATP-dependent RNA helicase DHR2 [EC:5.6.2.6]
D AO090102000353 unnamed protein product; predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D AO090026000256 unnamed protein product; GTP-binding protein AARP2 involved in 40S ribosome biogenesis K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D AO090102000652 unnamed protein product; predicted protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AO090701000223 unnamed protein product; predicted protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AO090001000667 unnamed protein product; 3'-5' exonuclease K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D AO090023000230 unnamed protein product; RNA lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D AO090005000666 unnamed protein product; casein kinase II, alpha subunit K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D AO090023000971 unnamed protein product; casein kinase II, beta subunit K03115 CSNK2B; casein kinase II subunit beta
D AO090038000436 unnamed protein product; casein kinase II, beta subunit K03115 CSNK2B; casein kinase II subunit beta
C Other 90S particles
D AO090001000615 unnamed protein product; apoptosis antagonizing transcription factor/protein transport protein K14782 AATF; protein AATF/BFR2
D AO090020000118 unnamed protein product; predicted protein K14784 CMS1; protein CMS1
D AO090020000071 unnamed protein product; protein required for 18S rRNA maturation and 40S ribosome biogenesis K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D AO090102000149 unnamed protein product; TBP-binding protein, activator of basal transcription (contains rrm motif) K14785 ESF2; ESF2/ABP1 family protein
D AO090009000402 unnamed protein product; KRR1-interacting protein involved in 40S ribosome biogenesis K14786 KRI1; protein KRI1
D AO090026000510 90S preribosome/SSU processome component KRR1 K06961 KRR1; ribosomal RNA assembly protein
D AO090003000855 unnamed protein product; RNA-binding protein (RRM superfamily) K14787 MRD1; multiple RNA-binding domain-containing protein 1
D AO090003000828 unnamed protein product; predicted P-loop ATPase fused to an acetyltransferase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D AO090020000411 unnamed protein product; nuclear localization sequence binding protein K11294 NCL; nucleolin
D AO090003000282 unnamed protein product; WD40 repeat protein K14788 NOL10; ribosome biogenesis protein ENP2
D AO090020000128 unnamed protein product; predicted protein K14789 NOP6; nucleolar protein 6
D AO090003000665 unnamed protein product; predicted RNA-binding protein, contains Pumilio domains K14790 NOP9; nucleolar protein 9
D AO090673000008 uncharacterized protein K11135 PINX1; Pin2-interacting protein X1
D AO090005000833 unnamed protein product; WD40 repeat-containing protein K14791 PWP1; periodic tryptophan protein 1
D AO090023000315 unnamed protein product; RNA 3'-terminal phosphate cyclase K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D AO090012000197 unnamed protein product; rRNA processing protein Rrp5 K14792 RRP5; rRNA biogenesis protein RRP5
D AO090023000825 rRNA processing protein RRP9 K14793 RRP9; ribosomal RNA-processing protein 9
D AO090026000462 unnamed protein product; uncharacterized conserved protein K14794 RRP12; ribosomal RNA-processing protein 12
D AO090701000087 unnamed protein product; uncharacterized conserved protein K14795 RRP36; ribosomal RNA-processing protein 36
D AO090003000485 unnamed protein product; predicted protein K14796 TMA23; nucleolar protein TMA23
D AO090001000418 unnamed protein product; Sof1-like rRNA processing protein (contains WD40 repeats) K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D AO090026000593 unnamed protein product; casein kinase (serine/threonine/tyrosine protein kinase) K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D AO090026000135 unnamed protein product; serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D AO090120000291 unnamed protein product; serine/threonine protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D AO090005000352 unnamed protein product; ribosomal RNA adenine dimethylase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D AO090003000009 unnamed protein product; predicted protein carboxyl methylase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D AO090124000075 unnamed protein product; cell adhesion complex protein bystin K14797 ENP1; essential nuclear protein 1
D AO090009000594 unnamed protein product; uncharacterized conserved protein K14798 LTV1; protein LTV1
D AO090102000602 unnamed protein product; predicted RNA-binding protein Nob1p involved in 26S proteasome assembly K11883 NOB1; RNA-binding protein NOB1
D AO090003000014 unnamed protein product; predicted RNA-binding protein Pno1p interacting with Nob1p and involved in 26S proteasome assembly K11884 PNO1; RNA-binding protein PNO1
D AO090003000454 unnamed protein product; GTPase Ran/TC4/GSP1 (nuclear protein transport pathway), small G protein superfamily K07936 RAN; GTP-binding nuclear protein Ran
D AO090009000705 unnamed protein product; predicted protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D AO090026000346 unnamed protein product; uncharacterized conserved protein K14799 TSR1; pre-rRNA-processing protein TSR1
D AO090001000465 unnamed protein product; uncharacterized conserved protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D AO090005001304 unnamed protein product; uncharacterized MYND Zn-finger protein K14801 TSR4; pre-rRNA-processing protein TSR4
D AO090005001650 unnamed protein product; nuclear transport receptor CRM1/MSN5 (importin beta superfamily) K14290 XPO1; exportin-1
D AO090005001133 unnamed protein product; karyopherin (importin) beta 1 K14293 KPNB1; importin subunit beta-1
D AO090005001105 unnamed protein product; nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) K18752 TNPO1; transportin-1
D AO090038000466 unnamed protein product; karyopherin (importin) beta 3 K20221 IPO4; importin-4
D AO090001000482 unnamed protein product; karyopherin (importin) beta 3 K20222 IPO5; importin-5
D AO090011000635 unnamed protein product; nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) K20223 IPO7; importin-7
D AO090012000225 unnamed protein product; predicted importin 9 K20224 IPO9; importin-9
C Other pre-40S particles
D AO090011000813 unnamed protein product; P-type ATPase K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D AO090003000054 unnamed protein product; predicted protein K03245 EIF3J; translation initiation factor 3 subunit J
D AO090005001595 unnamed protein product; serine/threonine protein phosphatase K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16]
D AO090038000399 unnamed protein product; RNAse L inhibitor, ABC superfamily K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
B Pre-60S particles
C Helicases
D AO090011000563 unnamed protein product; ATP-dependent RNA helicase K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D AO090009000242 unnamed protein product; ATP-dependent RNA helicase pitchoune K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D AO090001000569 unnamed protein product; RNA helicase K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D AO090005001231 unnamed protein product; ATP-dependent RNA helicase K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D AO090026000744 unnamed protein product; ATP-dependent RNA helicase K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D AO090023000504 unnamed protein product; ATP-dependent RNA helicase K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
D AO090012000805 unnamed protein product; ATP-dependent RNA helicase K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
D AO090026000163 unnamed protein product; RNA helicase K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D AO090001000749 unnamed protein product; ATP-dependent RNA helicase K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7]
D AO090023000859 unnamed protein product; nuclear exosomal RNA helicase MTR4, DEAD-box superfamily K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D AO090038000368 unnamed protein product; GTPase K14538 NUG1; nuclear GTP-binding protein
D AO090023000641 unnamed protein product; nucleolar GTPase K14537 NUG2; nuclear GTP-binding protein
D AO090026000495 unnamed protein product; GTP-binding protein CRFG/NOG1 (ODN superfamily) K06943 NOG1; nucleolar GTP-binding protein
D AO090009000595 unnamed protein product; predicted GTP-binding protein MMR1 K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-]
D AO090120000502 unnamed protein product; translation elongation factor 2/ribosome biogenesis protein RIA1 and related proteins K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-]
C RNases
D AO090012000410 unnamed protein product; 3'-5' exonuclease K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D AO090005000736 unnamed protein product; 3'-5' exonuclease K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D AO090102000515 unnamed protein product; 5'-3' exonuclease XRN1/KEM1/SEP1 involved in DNA strand exchange and mRNA turnover K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D AO090012000503 unnamed protein product; 5'-3' exonuclease HKE1/RAT1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D RNase MRP
E AO090120000111 unnamed protein product; ribonucleases P/MRP protein subunit K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E AO090026000730 unnamed protein product; predicted protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E AO090011000531 unnamed protein product; predicted protein K14526 POP7; ribonuclease P/MRP protein subunit POP7 [EC:3.1.26.5]
E AO090701000198 unnamed protein product; predicted protein K14528 POP8; ribonuclease P/MRP protein subunit POP8 [EC:3.1.26.5]
E AO090005000665 unnamed protein product; protein subunit of nuclear ribonuclease P (RNase P) K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E AO090009000422 unnamed protein product; predicted protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
E AO090023000229 unnamed protein product; predicted protein K14531 SNM1; ribonuclease MRP protein subunit SNM1
C Kinases
D AO090026000593 unnamed protein product; casein kinase (serine/threonine/tyrosine protein kinase) K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D AO090011000497 unnamed protein product; uncharacterized conserved protein similar to ATP/GTP-binding protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
C Export and cytoplasmic maturation factors
D AO090701000282 unnamed protein product; predicted transporter (ABC superfamily) K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D AO090020000003 unnamed protein product; molecular chaperone (DnaJ superfamily) K09506 DNAJA5; DnaJ homolog subfamily A member 5
D AO090009000659 unnamed protein product; translation initiation factor 6 (eIF-6) K03264 EIF6; translation initiation factor 6
D AO090012000995 unnamed protein product; molecular chaperones HSP70/HSC70, HSP70 superfamily K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D AO090103000007 unnamed protein product; molecular chaperones HSP70/HSC70, HSP70 superfamily K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D AO090120000495 mRNA turnover protein MRT4 K14815 MRT4; mRNA turnover protein 4
D AO090102000150 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3
D AO090003000807 unnamed protein product; mRNA export factor TAP/MEX67 K14284 NXF; nuclear RNA export factor
D AO090023000788 unnamed protein product; predicted protein K14285 NXT1_2; NTF2-related export protein 1/2
D AO090003000454 unnamed protein product; GTPase Ran/TC4/GSP1 (nuclear protein transport pathway), small G protein superfamily K07936 RAN; GTP-binding nuclear protein Ran
D AO090003000236 unnamed protein product; C2H2-type Zn-finger protein K14816 REI1; pre-60S factor REI1
D AO090701000082 66S preribosome component LOC1 K14817 LOC1; 60S ribosomal subunit assembly/export protein LOC1
D AO090103000333 unnamed protein product; predicted exosome subunit K14574 SDO1; ribosome maturation protein SDO1
D AO090206000004 unnamed protein product; AAA+-type ATPase K14575 AFG2; AAA family ATPase
D AO090701000310 unnamed protein product; angio-associated migratory cell protein (contains WD40 repeats) K14818 SQT1; ribosome assembly protein SQT1
D AO090005001650 unnamed protein product; nuclear transport receptor CRM1/MSN5 (importin beta superfamily) K14290 XPO1; exportin-1
D AO090005001133 unnamed protein product; karyopherin (importin) beta 1 K14293 KPNB1; importin subunit beta-1
D AO090005001105 unnamed protein product; nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) K18752 TNPO1; transportin-1
D AO090038000466 unnamed protein product; karyopherin (importin) beta 3 K20221 IPO4; importin-4
D AO090001000482 unnamed protein product; karyopherin (importin) beta 3 K20222 IPO5; importin-5
D AO090011000635 unnamed protein product; nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) K20223 IPO7; importin-7
D AO090012000225 unnamed protein product; predicted importin 9 K20224 IPO9; importin-9
D AO090023000868 unnamed protein product; dual specificity phosphatase K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D AO090009000506 unnamed protein product; predicted protein K14827 IPI1; pre-rRNA-processing protein IPI1
D AO090020000342 unnamed protein product; WD40 repeat protein K14829 IPI3; pre-rRNA-processing protein IPI3
D AO090120000405 unnamed protein product; nuclear protein involved in cell morphogenesis and cell surface growth K16912 LAS1; ribosomal biogenesis protein LAS1
C Ribosome quality control proteins
D AO090012000484 unnamed protein product; predicted E3 ubiquitin ligase K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
D AO090001000487 unnamed protein product; uncharacterized conserved protein K24970 TCF25; transcription factor 25
D AO090011000778 unnamed protein product; predicted RNA-binding protein homologous to eukaryotic snRNP K24971 NEMF; nuclear export mediator factor NEMF
D AO090102000107 unnamed protein product; AAA+-type ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D AO090005000811 unnamed protein product; nuclear pore complex, rNpl4 component (sc Npl4) K14015 NPLOC4; nuclear protein localization protein 4
D AO090005000853 unnamed protein product; ubiquitin fusion-degradation protein K14016 UFD1; ubiquitin fusion degradation protein 1
D AO090701000709 unnamed protein product; ankyrin repeat protein K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1
C Other pre-60S particles
D AO090005000878 unnamed protein product; RNA-binding protein required for biogenesis of the ribosomal 60S subunit K14820 BRX1; ribosome biogenesis protein BRX1
D AO090010000767 unnamed protein product; predicted protein K14822 CGR1; rRNA-processing protein CGR1
D AO090120000346 unnamed protein product; nucleolar protein-like/EBNA1-binding protein K14823 EBP2; rRNA-processing protein EBP2
D AO090005001611 unnamed protein product; WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis K14824 ERB1; ribosome biogenesis protein ERB1
D AO090001000519 unnamed protein product; FKBP-type peptidyl-prolyl cis-trans isomerase K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8]
D AO090023000818 unnamed protein product; predicted protein K14830 MAK11; protein MAK11
D AO090701000145 66S preribosome component MAK16 K14831 MAK16; protein MAK16
D AO090038000341 unnamed protein product; CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein K14832 MAK21; ribosome biogenesis protein MAK21
D AO090026000431 unnamed protein product; AAA ATPase containing von Willebrand factor type A (vWA) domain K14572 MDN1; midasin
D AO090102000114 ribosome biogenesis protein NIP7 K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D AO090005001072 unnamed protein product; predicted protein involved in nuclear export of pre-ribosomes K14833 NOC2; nucleolar complex protein 2
D AO090102000115 unnamed protein product; protein involved in the nuclear export of pre-ribosomes K14834 NOC3; nucleolar complex protein 3
D AO090003001348 S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D AO090023000965 unnamed protein product; nucleolar protein fibrillarin NOP77 (RRM superfamily) K14573 NOP4; nucleolar protein 4
D AO090103000065 unnamed protein product; RRM domain K14837 NOP12; nucleolar protein 12
D AO090023000955 rRNA processing protein gar2 K14838 NOP15; nucleolar protein 15
D AO090001000666 60S ribosome subunit biogenesis protein NOP53 K14840 NOP53; nucleolar protein 53
D AO090005001471 unnamed protein product; uncharacterized conserved protein related to ribosomal protein S8E K14842 NSA2; ribosome biogenesis protein NSA2
D AO090023000752 unnamed protein product; protein required for normal rRNA processing K14843 PES1; pescadillo
D AO090038000383 unnamed protein product; puf family RNA-binding protein K14844 PUF6; pumilio homology domain family member 6
D AO090005000833 unnamed protein product; WD40 repeat-containing protein K14791 PWP1; periodic tryptophan protein 1
D AO090701000189 unnamed protein product; predicted protein K14828 RIX1; pre-rRNA-processing protein RIX1
D AO090005001612 unnamed protein product; nuclear AAA ATPase (VCP subfamily) K14571 RIX7; ribosome biogenesis ATPase
D AO090009000673 unnamed protein product; ribosome biogenesis protein RPF1, contains IMP4 domain K14846 RPF1; ribosome production factor 1
D AO090005000668 unnamed protein product; protein required for biogenesis of the ribosomal 60S subunit K14847 RPF2; ribosome production factor 2
D AO090038000305 unnamed protein product; predicted protein K14849 RRP1; ribosomal RNA-processing protein 1
D AO090026000503 rRNA processing protein RRP8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D AO090026000462 unnamed protein product; uncharacterized conserved protein K14794 RRP12; ribosomal RNA-processing protein 12
D AO090005000107 unnamed protein product; predicted protein K14851 RRP17; ribosomal RNA-processing protein 17
D AO090005000129 unnamed protein product; predicted protein K14852 RRS1; regulator of ribosome biosynthesis
D AO090005000896 unnamed protein product; notchless-like WD40 repeat-containing protein K14855 RSA4; ribosome assembly protein 4
D AO090005001224 unnamed protein product; protein required for actin cytoskeleton organization and cell cycle progression K14856 SDA1; protein SDA1
D AO090120000326 unnamed protein product; putative SAM-dependent rRNA methyltransferase SPB1 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
D AO090001000427 unnamed protein product; RNA-binding protein required for 60S ribosomal subunit biogenesis K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D AO090005001362 unnamed protein product; predicted protein K14860 TMA16; translation machinery-associated protein 16
D AO090010000456 unnamed protein product; uncharacterized conserved protein K14861 URB1; nucleolar pre-ribosomal-associated protein 1
D AO090012000566 unnamed protein product; predicted protein K14862 URB2; nucleolar pre-ribosomal-associated protein 2
D AO090023000812 unnamed protein product; microtubule binding protein YTM1 (contains WD40 repeats) K14863 WDR12; ribosome biogenesis protein
D AO090003000900 unnamed protein product; predicted protein K23309 ZNHIT3; zinc finger HIT domain-containing protein 3
B Other ribosome biogenesis factors
C AO090120000437 unnamed protein product; isoamyl acetate-hydrolyzing esterase and related enzymes K15262 BCP1; protein BCP1
C AO090005000164 unnamed protein product; predicted protein K15263 LYER; cell growth-regulating nucleolar protein
C AO090023000574 unnamed protein product; proliferation-associated nucleolar protein (NOL1) K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C AO090009000229 unnamed protein product; RNA Methylase, SpoU family K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
C AO090001000745 unnamed protein product; cell division protein FtsJ K15508 MRM2; 21S rRNA (uridine2791-2'-O)-methyltransferase [EC:2.1.1.168]
C AO090009000697 unnamed protein product; predicted protein K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C AO090009000689 unnamed protein product; predicted protein K19307 BMT5; 25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313]
C AO090012000534 unnamed protein product; predicted protein K19308 BMT6; 25S rRNA (uracil2843-N3)-methyltransferase [EC:2.1.1.312]
C AO090102000142 unnamed protein product; metallopeptidase K26736 PA2G4; ERBB-3 binding protein
C AO090020000428 unnamed protein product; conserved ATP/GTP binding protein K19828 MTG1; mitochondrial GTPase 1
C AO090005001157 unnamed protein product; predicted GTP-binding protein (ODN superfamily) K03979 obgE; GTPase [EC:3.6.5.-]
C AO090003000381 unnamed protein product; predicted protein K19829 GEP3; genetic interactor of prohibitins 3, mitochondrial
C AO090005001396 unnamed protein product; predicted protein K15267 MTEF1; mitochondrial transcription factor 1
C AO090103000050 unnamed protein product; predicted methyltransferase K18803 HPM1; protein-histidine N-methyltransferase [EC:2.1.1.85]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D AO090005001291 unnamed protein product; ribosome biogenesis protein - Nop56p/Sik1p K14564 NOP56; nucleolar protein 56
D AO090003000422 unnamed protein product; 60S ribosomal protein L7A K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D AO090009000691 unnamed protein product; pseudouridine synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
B ribosomal protein modification factors
B rRNA processing factors
C AO090102000652 unnamed protein product; predicted protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
C AO090701000223 unnamed protein product; predicted protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C AO090005001157 unnamed protein product; predicted GTP-binding protein (ODN superfamily) K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C AO090011000780 unnamed protein product; RNA binding/translational regulation protein of the SUA5 family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024