+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Avibacterium paragallinarum

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D EIA51_07435 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D EIA51_07965 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E EIA51_09040 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D EIA51_04935 DNA-binding protein H-NS-like protein K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D EIA51_00920 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha C IHF (integration host factor) D EIA51_06270 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D EIA51_08380 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D EIA51_01670 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D EIA51_05160 SIS domain-containing protein K12961 diaA; DnaA initiator-associating protein D EIA51_01970 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D EIA51_11055 DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D EIA51_04550 RNA chaperone Hfq K03666 hfq; host factor-I protein D EIA51_05965 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D EIA51_10795 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D EIA51_06245 mukE; chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE D EIA51_06250 mukF; chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D EIA51_03470 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D EIA51_10120 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D EIA51_11270 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D EIA51_05970 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D EIA51_03415 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D EIA51_09455 SPOR domain-containing protein K03591 ftsN; cell division protein FtsN D EIA51_03465 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D EIA51_03445 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D EIA51_11275 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D EIA51_03475 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D EIA51_02725 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D EIA51_02835 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D EIA51_00490 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB D EIA51_04565 LysM peptidoglycan-binding domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D EIA51_09675 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D EIA51_02890 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D EIA51_07330 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D EIA51_03000 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D EIA51_02995 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D EIA51_02990 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D EIA51_03280 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D EIA51_05020 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D EIA51_05030 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D EIA51_00480 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D EIA51_00475 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D EIA51_02820 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D EIA51_03520 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D EIA51_04400 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D EIA51_04350 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D EIA51_10315 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D EIA51_00210 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024