+D	GENES	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a> &nbsp; KEGG Orthology (KO) - Aromatoleum petrolei </h2>
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A09100 Metabolism
B
B  09101 Carbohydrate metabolism
C    00010 Glycolysis / Gluconeogenesis [PATH:apet00010]
D      ToN1_43960 glk1; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_43980 glk2; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_43530 pgi; Glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      ToN1_36590 pfp; Pyrophosphate-fructose 6-phosphate 1-phosphotransferase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      ToN1_33620 fbp2; Fructose-1,6-bisphosphatase class 1	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      ToN1_02830 fbp1; Fructose-1,6-bisphosphatase class 1	K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D      ToN1_02880 fbaA1; Fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      ToN1_34990 fbaA2; Fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      ToN1_38030 tpiA; Triosephosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      ToN1_02860 gap1; Glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      ToN1_35060 gap2; Glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      ToN1_02870 pgk1; Phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      ToN1_35050 pgk2; Phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      ToN1_35350 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      ToN1_35430 Histidine phosphatase superfamily protein	K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      ToN1_23970 gpmI; Phosphoglycerate mutase (2,3-diphosphoglycerate-independent)	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      ToN1_43420 eno1; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_46510 eno2; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_13250 pyk1; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_35010 pyk2; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_43450 pyk3; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_46270 pps; Phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      ToN1_21140 aceE1; Pyruvate dehydrogenase E1 component	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      ToN1_40220 aceE2; Pyruvate dehydrogenase E1 component	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      ToN1_40730 pdhA1; Pyruvate dehydrogenase E1 component, alpha subunit	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      ToN1_40740 pdhB1; Pyruvate dehydrogenase E1 component, beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      ToN1_21150 aceF1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_32440 Putative dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_40210 aceF2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_40750 pdhC1; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_03610 korA1; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_05220 korA2; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_39450 korA3; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_43230 korA4; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_03600 korB1; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_05210 korB2; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_39460 korB3; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_43240 korB4; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_40590 S-(hydroxymethyl)glutathione dehydrogenase / class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      ToN1_41090 Alcohol dehydrogenase, PQQ-dependent	K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D      ToN1_41650 PQQ-dependent dehydrogenase, methanol/ethanol family	K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_01800 aldA1; Aldehyde dehydrogenase	K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D      ToN1_41580 aldA5; Aldehyde dehydrogenase	K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D      ToN1_19180 AMP-dependent synthetase/ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_33490 Putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_40720 putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_44310 acsA4; Acetoacetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_05630 CoA-binding domain-containing protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      ToN1_32180 CoA-binding domain-containing protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      ToN1_43460 Aldose 1-epimerase family protein	K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D      ToN1_35590 pgm; Phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      ToN1_08680 Putative glucose-6-phosphate 1-epimerase	K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D      ToN1_43430 Aldehyde dehydrogenase	K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D      ToN1_31190 pckG; Phosphoenolpyruvate carboxykinase (GTP)	K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C    00020 Citrate cycle (TCA cycle) [PATH:apet00020]
D      ToN1_47630 gltA2; Citrate synthase	K01647 CS; citrate synthase [EC:2.3.3.1]
D      ToN1_38830 acnA; Aconitate hydratase A	K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      ToN1_38850 acnB; Aconitate hydratase B	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      ToN1_11080 icd1; Isocitrate dehydrogenase [NADP], dimeric	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      ToN1_11090 icd2; Isocitrate dehydrogenase [NADP], monomeric	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      ToN1_47640 sucA; 2-oxoglutarate dehydrogenase E1 component	K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D      ToN1_47650 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_03610 korA1; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_05220 korA2; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_39450 korA3; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_43230 korA4; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_03600 korB1; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_05210 korB2; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_39460 korB3; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_43240 korB4; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_33030 sucD; Succinate--CoA ligase [ADP-forming], alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      ToN1_33020 sucC; Succinate--CoA ligase [ADP-forming], beta subunit	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      ToN1_20780 CoA transferase	K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D      ToN1_47600 sdhA; Succinate dehydrogenase, flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      ToN1_45300 sdhB1; Succinate dehydrogenase, iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_47610 sdhB2; Succinate dehydrogenase, iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_45320 sdhC1; Succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      ToN1_47580 sdhC2; Succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      ToN1_45310 sdhD1; Succinate dehydrogenase, hydrophobic membrane anchor subunit	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      ToN1_47590 sdhD2; Succinate dehydrogenase, hydrophobic membrane anchor subunit	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      ToN1_30050 frdA; Fumarate reductase, flavoprotein subunit	K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      ToN1_30060 frdB; Fumarate reductase, iron-sulfur subunit	K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_30070 frdC; Fumarate reductase, subunit C	K00246 frdC; succinate dehydrogenase subunit C
D      ToN1_30080 frdD; Fumarate reductase, subunit D	K00247 frdD; succinate dehydrogenase subunit D
D      ToN1_44300 fumA; Fumarate hydratase class I	K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D      ToN1_20310 fumC; Fumarate hydratase class II	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      ToN1_47560 mdh; Malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      ToN1_42570 pyc; Pyruvate carboxylase	K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D      ToN1_31190 pckG; Phosphoenolpyruvate carboxykinase (GTP)	K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D      ToN1_21140 aceE1; Pyruvate dehydrogenase E1 component	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      ToN1_40220 aceE2; Pyruvate dehydrogenase E1 component	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      ToN1_40730 pdhA1; Pyruvate dehydrogenase E1 component, alpha subunit	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      ToN1_40740 pdhB1; Pyruvate dehydrogenase E1 component, beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      ToN1_21150 aceF1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_32440 Putative dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_40210 aceF2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_40750 pdhC1; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C    00030 Pentose phosphate pathway [PATH:apet00030]
D      ToN1_43530 pgi; Glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      ToN1_43500 zwf1; Glucose-6-phosphate 1-dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      ToN1_43970 zwf2; Glucose-6-phosphate 1-dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      ToN1_43510 pgl; 6-phosphogluconolactonase	K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D      ToN1_16530 rpe; Ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D      ToN1_02850 tktA; Transketolase I	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_32040 Putative transketolase, subunit B	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_32050 Putative transketolase, subunit A	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_35070 tkt; Transketolase I	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_36410 tal; Transaldolase	K00616 TALDO1; transaldolase [EC:2.2.1.2]
D      ToN1_35180 rpiA; Ribose-5-phosphate isomerase A	K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D      ToN1_35590 pgm; Phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      ToN1_23000 prs1; Ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      ToN1_31810 prs2; Ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      ToN1_43480 edd; Phosphogluconate dehydratase	K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D      ToN1_43470 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase	K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D      ToN1_43430 Aldehyde dehydrogenase	K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D      ToN1_39200 Aldehyde:ferredoxin oxidoreductase	K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D      ToN1_41800 aor; Tungsten-containing aldehyde ferredoxin oxidoreductase	K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D      ToN1_13230 Putative hydroxypyruvate reductase	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      ToN1_02880 fbaA1; Fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      ToN1_34990 fbaA2; Fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      ToN1_33620 fbp2; Fructose-1,6-bisphosphatase class 1	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      ToN1_02830 fbp1; Fructose-1,6-bisphosphatase class 1	K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D      ToN1_36590 pfp; Pyrophosphate-fructose 6-phosphate 1-phosphotransferase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C    00040 Pentose and glucuronate interconversions [PATH:apet00040]
D      ToN1_15210 udg1; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      ToN1_34850 udg2; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      ToN1_09560 epsT; UTP--glucose-1-phosphate uridylyltransferase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      ToN1_16530 rpe; Ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D      ToN1_18970 Putative L-fuculose 1-phosphate aldolase	K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C    00051 Fructose and mannose metabolism [PATH:apet00051]
D      ToN1_43760 Carbohydrate kinase	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D      ToN1_17530 Mannose-1-phosphate guanylyltransferase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      ToN1_37290 xanB; Xanthan biosynthesis protein	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      ToN1_35590 pgm; Phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      ToN1_34860 Putative mannose-1-phosphate guanylyltransferase	K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D      ToN1_17490 gmd1; GDP-mannose 4,6-dehydratase	K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D      ToN1_17510 gmd2; GDP-mannose 4,6-dehydratase	K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D      ToN1_17520 fcl; GDP-L-fucose synthase	K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D      ToN1_18970 Putative L-fuculose 1-phosphate aldolase	K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D      ToN1_23210 Fumarylacetoacetase family related protein	K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D      ToN1_43250 Fumarylacetoacetase family related protein	K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D      ToN1_36590 pfp; Pyrophosphate-fructose 6-phosphate 1-phosphotransferase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      ToN1_33620 fbp2; Fructose-1,6-bisphosphatase class 1	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      ToN1_02830 fbp1; Fructose-1,6-bisphosphatase class 1	K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D      ToN1_02880 fbaA1; Fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      ToN1_34990 fbaA2; Fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      ToN1_38030 tpiA; Triosephosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      ToN1_26540 Phosphotransferase system domain-containing protein, mannose-type IIA component	K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C    00052 Galactose metabolism [PATH:apet00052]
D      ToN1_43460 Aldose 1-epimerase family protein	K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D      ToN1_19380 galE; UDP-glucose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      ToN1_09560 epsT; UTP--glucose-1-phosphate uridylyltransferase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      ToN1_35590 pgm; Phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      ToN1_43960 glk1; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_43980 glk2; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_36590 pfp; Pyrophosphate-fructose 6-phosphate 1-phosphotransferase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      ToN1_21870 Alpha amylase	K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D      ToN1_44080 Alpha-amylase	K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C    00053 Ascorbate and aldarate metabolism [PATH:apet00053]
D      ToN1_15210 udg1; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      ToN1_34850 udg2; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      ToN1_17550 NAD-dependent epimerase/dehydratase	K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00500 Starch and sucrose metabolism [PATH:apet00500]
D      ToN1_21870 Alpha amylase	K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D      ToN1_44080 Alpha-amylase	K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D      ToN1_09560 epsT; UTP--glucose-1-phosphate uridylyltransferase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      ToN1_21860 Putative glucan 1,3-beta-glucosidase	K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58]
D      ToN1_44130 Glycoside hydrolase family 37 protein	K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D      ToN1_35590 pgm; Phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      ToN1_43960 glk1; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_43980 glk2; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_43530 pgi; Glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      ToN1_43760 Carbohydrate kinase	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C    00520 Amino sugar and nucleotide sugar metabolism [PATH:apet00520]
D      ToN1_09830 nagZ; Beta-hexosaminidase	K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D      ToN1_40840 Putative chitosanase	K01233 csn; chitosanase [EC:3.2.1.132]
D      ToN1_43760 Carbohydrate kinase	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D      ToN1_21260 glmS; Glutamine--fructose-6-phosphate aminotransferase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      ToN1_37980 glmM; Phosphoglucosamine mutase	K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D      ToN1_21270 glmU; Bifunctional protein	K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D      ToN1_34570 Aminoglycoside phosphotransferase domain-containing protein	K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D      ToN1_34560 Nucleotidyl transferase domain-containing protein	K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D      ToN1_32820 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      ToN1_22860 murB; UDP-N-acetylenolpyruvoylglucosamine reductase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      ToN1_16000 UDP-N-acetylglucosamine 2-epimerase	K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D      ToN1_12080 UDP-glucose/GDP-mannose dehydrogenase	K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D      ToN1_17470 capD; UDP-glucose 4-epimerase	K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D      ToN1_43960 glk1; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_43980 glk2; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_35590 pgm; Phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      ToN1_09560 epsT; UTP--glucose-1-phosphate uridylyltransferase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      ToN1_15210 udg1; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      ToN1_34850 udg2; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      ToN1_19380 galE; UDP-glucose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      ToN1_17550 NAD-dependent epimerase/dehydratase	K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D      ToN1_26540 Phosphotransferase system domain-containing protein, mannose-type IIA component	K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D      ToN1_43530 pgi; Glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      ToN1_34860 Putative mannose-1-phosphate guanylyltransferase	K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D      ToN1_17530 Mannose-1-phosphate guanylyltransferase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      ToN1_37290 xanB; Xanthan biosynthesis protein	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      ToN1_17490 gmd1; GDP-mannose 4,6-dehydratase	K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D      ToN1_17510 gmd2; GDP-mannose 4,6-dehydratase	K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D      ToN1_28600 Aminotransferase family protein	K13010 per; perosamine synthetase [EC:2.6.1.102]
D      ToN1_17520 fcl; GDP-L-fucose synthase	K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D      ToN1_18150 ascD; CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase	K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C    00620 Pyruvate metabolism [PATH:apet00620]
D      ToN1_19180 AMP-dependent synthetase/ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_33490 Putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_40720 putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_44310 acsA4; Acetoacetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_03610 korA1; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_05220 korA2; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_39450 korA3; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_43230 korA4; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_03600 korB1; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_05210 korB2; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_39460 korB3; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_43240 korB4; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_21140 aceE1; Pyruvate dehydrogenase E1 component	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      ToN1_40220 aceE2; Pyruvate dehydrogenase E1 component	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      ToN1_40730 pdhA1; Pyruvate dehydrogenase E1 component, alpha subunit	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      ToN1_40740 pdhB1; Pyruvate dehydrogenase E1 component, beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      ToN1_21150 aceF1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_32440 Putative dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_40210 aceF2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_40750 pdhC1; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40590 S-(hydroxymethyl)glutathione dehydrogenase / class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      ToN1_41090 Alcohol dehydrogenase, PQQ-dependent	K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D      ToN1_41650 PQQ-dependent dehydrogenase, methanol/ethanol family	K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D      ToN1_21290 ackA; Acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      ToN1_13780 pta; Phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      ToN1_21280 putative phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      ToN1_13250 pyk1; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_35010 pyk2; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_43450 pyk3; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_16790 accA; Acetyl-CoA carboxylase carboxyl transferase, alpha subunit	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      ToN1_17270 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      ToN1_17280 accC; Biotin carboxylase	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      ToN1_37660 accD; Acetyl-CoA carboxylase carboxyl transferase, beta subunit	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      ToN1_10340 acyP; Acylphosphatase	K01512 acyP; acylphosphatase [EC:3.6.1.7]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_01800 aldA1; Aldehyde dehydrogenase	K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D      ToN1_41580 aldA5; Aldehyde dehydrogenase	K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D      ToN1_20780 CoA transferase	K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D      ToN1_05630 CoA-binding domain-containing protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      ToN1_32180 CoA-binding domain-containing protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      ToN1_19830 FAD-dependent oxidoreductase	K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D      ToN1_41620 aldA6; Aldehyde dehydrogenase	K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D      ToN1_15420 gloA; Lactoylglutathione lyase	K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D      ToN1_20190 Lactoylglutathione lyase	K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D      ToN1_29670 Lactoylglutathione lyase	K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D      ToN1_00560 gloB; Hydroxyacylglutathione hydrolase	K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D      ToN1_23800 Metallo-beta-lactamase domain-containing protein	K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D      ToN1_10450 maeB; NADP-dependent malic enzyme	K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D      ToN1_31200 NADP-dependent malic enzyme	K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D      ToN1_42570 pyc; Pyruvate carboxylase	K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D      ToN1_47560 mdh; Malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      ToN1_44300 fumA; Fumarate hydratase class I	K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D      ToN1_20310 fumC; Fumarate hydratase class II	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      ToN1_30050 frdA; Fumarate reductase, flavoprotein subunit	K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      ToN1_30060 frdB; Fumarate reductase, iron-sulfur subunit	K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_30070 frdC; Fumarate reductase, subunit C	K00246 frdC; succinate dehydrogenase subunit C
D      ToN1_30080 frdD; Fumarate reductase, subunit D	K00247 frdD; succinate dehydrogenase subunit D
D      ToN1_34430 ppc1; Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      ToN1_43410 ppc2; Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      ToN1_31190 pckG; Phosphoenolpyruvate carboxykinase (GTP)	K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D      ToN1_46270 pps; Phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      ToN1_10960 glcB; Malate synthase G	K01638 aceB; malate synthase [EC:2.3.3.9]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_14420 leuA2; 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D      ToN1_13090 leuA1; 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C    00630 Glyoxylate and dicarboxylate metabolism [PATH:apet00630]
D      ToN1_11260 aceA; Isocitrate lyase	K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D      ToN1_19180 AMP-dependent synthetase/ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_33490 Putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_40720 putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_44310 acsA4; Acetoacetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_10960 glcB; Malate synthase G	K01638 aceB; malate synthase [EC:2.3.3.9]
D      ToN1_47560 mdh; Malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      ToN1_47630 gltA2; Citrate synthase	K01647 CS; citrate synthase [EC:2.3.3.1]
D      ToN1_38830 acnA; Aconitate hydratase A	K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      ToN1_38850 acnB; Aconitate hydratase B	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_37350 phaB1; Acetoacetyl-CoA reductase	K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D      ToN1_37360 phaB2; Acetoacetyl-CoA reductase	K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D      ToN1_11540 Putative MaoC-like dehydratase	K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D      ToN1_20250 pccA; Propionyl-CoA carboxylase, alpha subunit	K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D      ToN1_20270 pccB; Propionyl-CoA carboxylase, beta subunit	K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D      ToN1_20290 sbmB; Methylmalonyl-CoA mutase, beta subunit	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      ToN1_50390 Methylmalonyl-CoA mutase, C-terminal domain-containing protein	K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D      ToN1_50400 sbmA; Methylmalonyl-CoA mutase, alpha subunit	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      ToN1_11730 glcD; Glycolate oxidase (FAD-linked subunit) oxidoreductase protein	K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D      ToN1_11710 glcE; Glycolate oxidase FAD binding subunit	K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D      ToN1_11700 glcF; Glycolate oxidase iron-sulfur subunit	K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D      ToN1_16520 putative phosphoglycolate phosphatase	K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D      ToN1_10100 Putative HAD hydrolase	K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D      ToN1_46860 Haloacid dehalogenase superfamily protein	K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D      ToN1_02800 cbbL; Ribulose bisphosphate carboxylase large chain	K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D      ToN1_02810 cbbS; Ribulose bisphosphate carboxylase small chain	K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D      ToN1_35420 glyA1; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_42500 glyA2; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_45110 glyA3; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_49950 glyA4; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_08340 gcvP1; Glycine dehydrogenase (decarboxylating)	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      ToN1_42470 gcvP2; Glycine dehydrogenase (decarboxylating)	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      ToN1_42530 gcvT; Glycine cleavage T-protein	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_08330 gcvH1; Glycine cleavage system H protein	K02437 gcvH; glycine cleavage system H protein
D      ToN1_42460 gcvH2; Glycine cleavage system H protein	K02437 gcvH; glycine cleavage system H protein
D      ToN1_13190 gcl; Glyoxylate carboligase	K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D      ToN1_13200 hyi; Hydroxypyruvate isomerase	K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D      ToN1_18990 putative 6-phosphogluconate dehydrogenase	K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D      ToN1_18980 putative 6-phosphogluconate dehydrogenase	K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D      ToN1_13210 garR; 2-hydroxy-3-oxopropionate reductase	K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D      ToN1_13230 Putative hydroxypyruvate reductase	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      ToN1_41620 aldA6; Aldehyde dehydrogenase	K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D      ToN1_43470 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase	K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D      ToN1_44770 Putative formate dehydrogenase, delta subunit	K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D      ToN1_23930 fdhA1; Formate dehydrogenase, alpha subunit	K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D      ToN1_24710 fdhA2; Formate dehydrogenase, alpha subunit	K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D      ToN1_44790 Formate dehydrogenase, alpha subunit	K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D      ToN1_23940 fdhB1; Formate dehydrogenase, beta subunit	K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D      ToN1_24700 fdhB2; Formate dehydrogenase, beta subunit	K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D      ToN1_44800 NADH-quinone oxidoreductase, 51kDa subunit	K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D      ToN1_24680 fdhC; Formate dehydrogenase, gamma subunit	K00127 fdoI; formate dehydrogenase subunit gamma
D      ToN1_44810 NADH-quinone oxidoreductase, 24kDa subunit	K00127 fdoI; formate dehydrogenase subunit gamma
D      ToN1_23380 purU1; Formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      ToN1_44970 purU2; Formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      ToN1_50250 purU3; Formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C    00640 Propanoate metabolism [PATH:apet00640]
D      ToN1_19180 AMP-dependent synthetase/ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_33490 Putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_40720 putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_44310 acsA4; Acetoacetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_11980 prpE; Propionate--CoA ligase	K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D      ToN1_05630 CoA-binding domain-containing protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      ToN1_32180 CoA-binding domain-containing protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      ToN1_21290 ackA; Acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      ToN1_13780 pta; Phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      ToN1_21280 putative phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      ToN1_46970 pdhA2; Pyruvate dehydrogenase E1 component, alpha subunit	K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D      ToN1_46960 pdhB2; Pyruvate dehydrogenase E1 component, beta subunit	K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D      ToN1_46950 pdhC2; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_04960 Acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      ToN1_29900 Acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      ToN1_12000 Putative alcohol dehydrogenase	K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D      ToN1_13440 acuI; Acrylyl-CoA reductase	K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_06950 badK1; putative 4-isopropyl-1-cyclohexene-1-carboxyl-CoA hydratase, BadK-like	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_21760 fadB; Alpha-subunit of fatty acid oxidation complex	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_16790 accA; Acetyl-CoA carboxylase carboxyl transferase, alpha subunit	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      ToN1_17270 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      ToN1_17280 accC; Biotin carboxylase	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      ToN1_37660 accD; Acetyl-CoA carboxylase carboxyl transferase, beta subunit	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      ToN1_18480 Malonyl-CoA decarboxylase	K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D      ToN1_29070 Aminotransferase class-III	K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D      ToN1_20250 pccA; Propionyl-CoA carboxylase, alpha subunit	K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D      ToN1_20270 pccB; Propionyl-CoA carboxylase, beta subunit	K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D      ToN1_20290 sbmB; Methylmalonyl-CoA mutase, beta subunit	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      ToN1_50390 Methylmalonyl-CoA mutase, C-terminal domain-containing protein	K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D      ToN1_50400 sbmA; Methylmalonyl-CoA mutase, alpha subunit	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      ToN1_33020 sucC; Succinate--CoA ligase [ADP-forming], beta subunit	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      ToN1_33030 sucD; Succinate--CoA ligase [ADP-forming], alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      ToN1_29060 mmsA; Methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      ToN1_38850 acnB; Aconitate hydratase B	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C    00650 Butanoate metabolism [PATH:apet00650]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06100 3-hydroxyacyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_28820 paaH1; 3-hydroxyadipyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_32150 hbd1; 3-hydroxybutanoyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_37410 hbd2; 3-hydroxybutanoyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_46830 paaH2; 3-hydroxyadipyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_02320 Putative 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      ToN1_02620 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      ToN1_21720 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      ToN1_06950 badK1; putative 4-isopropyl-1-cyclohexene-1-carboxyl-CoA hydratase, BadK-like	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_21760 fadB; Alpha-subunit of fatty acid oxidation complex	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_05600 Enoyl-CoA hydratase/isomerase	K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_06020 Enoyl-CoA hydratase/isomerase	K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_26940 Enoyl-CoA hydratase	K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_04960 Acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      ToN1_29900 Acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      ToN1_03700 atoD; Acetate CoA-transferase, alpha subunit	K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D      ToN1_03690 atoA; Acetate CoA-transferase, beta subunit	K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D      ToN1_11540 Putative MaoC-like dehydratase	K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D      ToN1_29850 phaC1; Poly(3-hydroxyalkanoate) polymerase	K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D      ToN1_36950 Putative poly-beta-hydroxybutyrate polymerase	K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D      ToN1_37340 phaC2; Poly(3-hydroxyalkanoate) polymerase	K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D      ToN1_37350 phaB1; Acetoacetyl-CoA reductase	K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D      ToN1_37360 phaB2; Acetoacetyl-CoA reductase	K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D      ToN1_21050 Putative Asp/Glu racemase	K01799 nicE; maleate isomerase [EC:5.2.1.1]
D      ToN1_43270 Racemase family protein	K01799 nicE; maleate isomerase [EC:5.2.1.1]
D      ToN1_47600 sdhA; Succinate dehydrogenase, flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      ToN1_45300 sdhB1; Succinate dehydrogenase, iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_47610 sdhB2; Succinate dehydrogenase, iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_45320 sdhC1; Succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      ToN1_47580 sdhC2; Succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      ToN1_45310 sdhD1; Succinate dehydrogenase, hydrophobic membrane anchor subunit	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      ToN1_47590 sdhD2; Succinate dehydrogenase, hydrophobic membrane anchor subunit	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      ToN1_30050 frdA; Fumarate reductase, flavoprotein subunit	K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      ToN1_30060 frdB; Fumarate reductase, iron-sulfur subunit	K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_30070 frdC; Fumarate reductase, subunit C	K00246 frdC; succinate dehydrogenase subunit C
D      ToN1_30080 frdD; Fumarate reductase, subunit D	K00247 frdD; succinate dehydrogenase subunit D
D      ToN1_08650 gabD; Succinate-semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      ToN1_20780 CoA transferase	K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D      ToN1_03610 korA1; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_05220 korA2; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_39450 korA3; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_43230 korA4; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_03600 korB1; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_05210 korB2; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_39460 korB3; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_43240 korB4; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_29920 Hydroxymethylglutaryl-CoA lyase	K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D      ToN1_19170 scoA; Succinyl-CoA:3-oxoacid CoA transferase subunit A	K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D      ToN1_19160 scoB; Succinyl-CoA:3-oxoacid CoA transferase, subunit B	K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D      ToN1_07350 acsA1; Acetoacetyl-CoA synthetase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      ToN1_36250 acsA2; Acetoacetyl-CoA synthetase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      ToN1_43950 acsA3; Acetoacetyl-CoA synthetase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      ToN1_02140 Putative acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_14250 ilvI; Acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_37480 ilvB; Acetolactate synthase isozyme 1, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_14260 ilvH; Acetolactate synthase, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      ToN1_37490 ilvN; Acetolactate synthase isozyme 1, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C    00660 C5-Branched dibasic acid metabolism [PATH:apet00660]
D      ToN1_02140 Putative acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_14250 ilvI; Acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_37480 ilvB; Acetolactate synthase isozyme 1, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_14260 ilvH; Acetolactate synthase, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      ToN1_37490 ilvN; Acetolactate synthase isozyme 1, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      ToN1_04130 CoA-transferase	K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D      ToN1_05480 CoA-transferase family III protein	K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D      ToN1_33020 sucC; Succinate--CoA ligase [ADP-forming], beta subunit	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      ToN1_33030 sucD; Succinate--CoA ligase [ADP-forming], alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      ToN1_12320 MaoC-like dehydratase	K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D      ToN1_37540 leuC; 3-isopropylmalate dehydratase large subunit	K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D      ToN1_37550 leuD; 3-isopropylmalate dehydratase small subunit	K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D      ToN1_37560 leuB; 3-isopropylmalate dehydrogenase	K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C    00562 Inositol phosphate metabolism [PATH:apet00562]
D      ToN1_09770 suhB; Inositol-1-monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      ToN1_35100 Inositol-1-monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      ToN1_29060 mmsA; Methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      ToN1_38030 tpiA; Triosephosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B  09102 Energy metabolism
C    00190 Oxidative phosphorylation [PATH:apet00190]
D      ToN1_38050 nuoA; NADH-quinone oxidoreductase, subunit A	K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D      ToN1_38060 nuoB; NADH-quinone oxidoreductase, subunit B	K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D      ToN1_38070 nuoC; NADH-quinone oxidoreductase, subunit C	K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D      ToN1_38080 nuoD; NADH-quinone oxidoreductase, subunit D	K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D      ToN1_38090 nuoE; NADH-quinone oxidoreductase, subunit E	K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D      ToN1_38100 nuoF; NADH-quinone oxidoreductase, subunit F	K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D      ToN1_38110 nuoG; NADH-quinone oxidoreductase, subunit G	K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D      ToN1_38120 nuoH; NADH-quinone oxidoreductase, subunit H	K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D      ToN1_38130 nuoI; NADH-quinone oxidoreductase, subunit I	K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D      ToN1_38140 nuoJ; NADH-quinone oxidoreductase, subunit J	K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D      ToN1_38150 nuoK; NADH-quinone oxidoreductase, subunit K	K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D      ToN1_38160 nuoL; NADH-quinone oxidoreductase, subunit L	K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D      ToN1_38170 nuoM; NADH-quinone oxidoreductase, subunit M	K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D      ToN1_38180 nuoN; NADH-quinone oxidoreductase, subunit N	K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D      ToN1_01500 Putative NADH dehydrogenase	K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      ToN1_47600 sdhA; Succinate dehydrogenase, flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      ToN1_45300 sdhB1; Succinate dehydrogenase, iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_47610 sdhB2; Succinate dehydrogenase, iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_45320 sdhC1; Succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      ToN1_47580 sdhC2; Succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      ToN1_45310 sdhD1; Succinate dehydrogenase, hydrophobic membrane anchor subunit	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      ToN1_47590 sdhD2; Succinate dehydrogenase, hydrophobic membrane anchor subunit	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      ToN1_30050 frdA; Fumarate reductase, flavoprotein subunit	K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      ToN1_30060 frdB; Fumarate reductase, iron-sulfur subunit	K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_30070 frdC; Fumarate reductase, subunit C	K00246 frdC; succinate dehydrogenase subunit C
D      ToN1_30080 frdD; Fumarate reductase, subunit D	K00247 frdD; succinate dehydrogenase subunit D
D      ToN1_33560 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit	K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D      ToN1_33570 petB; Cytochrome b	K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D      ToN1_33580 petC; Cytochrome c1	K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D      ToN1_16110 ctaB; Protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      ToN1_07170 Cytochrome c oxidase, subunit IV	K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D      ToN1_16150 coxC; Cytochrome c oxidase, subunit III	K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D      ToN1_29470 putative cytochrome c oxidase, subunit III	K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D      ToN1_16190 coxA; Cytochrome c oxidase, subunit I	K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D      ToN1_17730 Cytochrome c oxidase, subunit I	K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D      ToN1_16200 coxB; Cytochrome c oxidase, subunit II	K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D      ToN1_17720 Cytochrome c oxidase, subunit II	K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D      ToN1_16170 ctaG; Cytochrome c oxidase assembly protein	K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D      ToN1_16120 putative cytochrome oxidase assembly protein, CtaA family	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      ToN1_36860 ccoN; Cbb3-type cytochrome c oxidase, subunit N	K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D      ToN1_49780 putative cytochrome c oxidase, transmembrane subunit I	K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D      ToN1_36870 ccoO; Cbb3-type cytochrome c oxidase, subunit O	K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D      ToN1_49770 putative cytochrome c, oxidase subunit O	K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D      ToN1_36880 ccoQ; Cbb3-type cytochrome c oxidase, subunit Q	K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D      ToN1_28270 Cytochrome c, class I	K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D      ToN1_36890 ccoP; Cbb3-type cytochrome c oxidase, subunit P	K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D      ToN1_02540 cydA; Cytochrome bd ubiquinol oxidase, subunit I	K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D      ToN1_02550 cydB; Cytochrome bd ubiquinol oxidase, subunit II	K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D      ToN1_02560 cydX; Cytochrome bd ubiquinol oxidase, subunit X	K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D      ToN1_02460 Putative cytochrome c	K08738 CYC; cytochrome c
D      ToN1_04030 putative cytochrome c	K08738 CYC; cytochrome c
D      ToN1_04630 Double Cache domain 2-containing protein	K08738 CYC; cytochrome c
D      ToN1_06250 Single Cache domain 2 domain-containing protein	K08738 CYC; cytochrome c
D      ToN1_18240 putative cytochrome c	K08738 CYC; cytochrome c
D      ToN1_20050 Putative cytochrome c-551	K08738 CYC; cytochrome c
D      ToN1_20960 Putative cytochrome c	K08738 CYC; cytochrome c
D      ToN1_10370 Cytochrome c	K08738 CYC; cytochrome c
D      ToN1_13550 Double Cache domain 2-containing protein	K08738 CYC; cytochrome c
D      ToN1_35020 Single Cache domain 2 domain-containing protein	K08738 CYC; cytochrome c
D      ToN1_41100 Double Cache domain 2-containing protein	K08738 CYC; cytochrome c
D      ToN1_41940 Cytochrome c	K08738 CYC; cytochrome c
D      ToN1_24460 atpA; ATP synthase, alpha subunit	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      ToN1_24440 atpD; ATP synthase, beta subunit	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      ToN1_24450 atpG; ATP synthase, gamma subunit	K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D      ToN1_24470 atpH; ATP synthase, delta subunit	K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D      ToN1_24430 atpC; ATP synthase, epsilon subunit	K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D      ToN1_24500 atpB; ATP synthase, subunit a	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      ToN1_24480 atpF; ATP synthase, subunit b	K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D      ToN1_24490 atpE; ATP synthase, subunit c	K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D      ToN1_37070 ppa; Inorganic pyrophosphatase	K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D      ToN1_45710 ppk; Polyphosphate kinase	K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C    00195 Photosynthesis
C    00196 Photosynthesis - antenna proteins
C    00710 Carbon fixation by Calvin cycle [PATH:apet00710]
D      ToN1_02800 cbbL; Ribulose bisphosphate carboxylase large chain	K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D      ToN1_02810 cbbS; Ribulose bisphosphate carboxylase small chain	K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D      ToN1_02870 pgk1; Phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      ToN1_35050 pgk2; Phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      ToN1_02860 gap1; Glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      ToN1_35060 gap2; Glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      ToN1_02880 fbaA1; Fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      ToN1_34990 fbaA2; Fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      ToN1_33620 fbp2; Fructose-1,6-bisphosphatase class 1	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      ToN1_02830 fbp1; Fructose-1,6-bisphosphatase class 1	K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D      ToN1_02850 tktA; Transketolase I	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_32040 Putative transketolase, subunit B	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_32050 Putative transketolase, subunit A	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_35070 tkt; Transketolase I	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_35180 rpiA; Ribose-5-phosphate isomerase A	K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D      ToN1_02840 cbbP1; Phosphoribulokinase	K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D      ToN1_35080 cbbP2; Phosphoribulokinase	K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D      ToN1_38030 tpiA; Triosephosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      ToN1_16530 rpe; Ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D      ToN1_36410 tal; Transaldolase	K00616 TALDO1; transaldolase [EC:2.2.1.2]
D      ToN1_34430 ppc1; Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      ToN1_43410 ppc2; Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      ToN1_10450 maeB; NADP-dependent malic enzyme	K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D      ToN1_31200 NADP-dependent malic enzyme	K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D      ToN1_47560 mdh; Malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C    00720 Other carbon fixation pathways [PATH:apet00720]
D      ToN1_46270 pps; Phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      ToN1_34430 ppc1; Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      ToN1_43410 ppc2; Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      ToN1_42570 pyc; Pyruvate carboxylase	K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D      ToN1_47560 mdh; Malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      ToN1_44300 fumA; Fumarate hydratase class I	K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D      ToN1_20310 fumC; Fumarate hydratase class II	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      ToN1_47600 sdhA; Succinate dehydrogenase, flavoprotein subunit	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      ToN1_45300 sdhB1; Succinate dehydrogenase, iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_47610 sdhB2; Succinate dehydrogenase, iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_45320 sdhC1; Succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      ToN1_47580 sdhC2; Succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      ToN1_45310 sdhD1; Succinate dehydrogenase, hydrophobic membrane anchor subunit	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      ToN1_47590 sdhD2; Succinate dehydrogenase, hydrophobic membrane anchor subunit	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      ToN1_30050 frdA; Fumarate reductase, flavoprotein subunit	K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      ToN1_30060 frdB; Fumarate reductase, iron-sulfur subunit	K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_30070 frdC; Fumarate reductase, subunit C	K00246 frdC; succinate dehydrogenase subunit C
D      ToN1_30080 frdD; Fumarate reductase, subunit D	K00247 frdD; succinate dehydrogenase subunit D
D      ToN1_33030 sucD; Succinate--CoA ligase [ADP-forming], alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      ToN1_33020 sucC; Succinate--CoA ligase [ADP-forming], beta subunit	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      ToN1_50300 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase	K15016 K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_03610 korA1; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_05220 korA2; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_39450 korA3; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_43230 korA4; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      ToN1_03600 korB1; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_05210 korB2; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_39460 korB3; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_43240 korB4; 2-oxoglutarate:ferredoxin oxidoreductase, beta subunit	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      ToN1_11080 icd1; Isocitrate dehydrogenase [NADP], dimeric	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      ToN1_11090 icd2; Isocitrate dehydrogenase [NADP], monomeric	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      ToN1_38830 acnA; Aconitate hydratase A	K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      ToN1_38850 acnB; Aconitate hydratase B	K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D      ToN1_16790 accA; Acetyl-CoA carboxylase carboxyl transferase, alpha subunit	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      ToN1_17270 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      ToN1_17280 accC; Biotin carboxylase	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      ToN1_37660 accD; Acetyl-CoA carboxylase carboxyl transferase, beta subunit	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      ToN1_04120 HotDog domain superfamily protein	K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D      ToN1_05500 HotDog domain superfamily protein	K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D      ToN1_20290 sbmB; Methylmalonyl-CoA mutase, beta subunit	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      ToN1_50400 sbmA; Methylmalonyl-CoA mutase, alpha subunit	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      ToN1_50390 Methylmalonyl-CoA mutase, C-terminal domain-containing protein	K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D      ToN1_40300 folD1; Bifunctional protein	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      ToN1_44960 folD2; Bifunctional protein	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      ToN1_42880 Uncharacterized protein	K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D      ToN1_30350 metF; 5,10-methylenetetrahydrofolate reductase	K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D      ToN1_45020 Putative methylenetetrahydrofolate reductase	K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D      ToN1_41790 [4Fe-4S] iron-sulfur domain-containing protein	K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D      ToN1_13780 pta; Phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      ToN1_21280 putative phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      ToN1_21290 ackA; Acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      ToN1_19180 AMP-dependent synthetase/ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_33490 Putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_40720 putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_44310 acsA4; Acetoacetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C    00680 Methane metabolism [PATH:apet00680]
D      ToN1_40590 S-(hydroxymethyl)glutathione dehydrogenase / class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      ToN1_40580 fghA; S-formylglutathione hydrolase	K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D      ToN1_23930 fdhA1; Formate dehydrogenase, alpha subunit	K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D      ToN1_24710 fdhA2; Formate dehydrogenase, alpha subunit	K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D      ToN1_44790 Formate dehydrogenase, alpha subunit	K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D      ToN1_23940 fdhB1; Formate dehydrogenase, beta subunit	K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D      ToN1_24700 fdhB2; Formate dehydrogenase, beta subunit	K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D      ToN1_44800 NADH-quinone oxidoreductase, 51kDa subunit	K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D      ToN1_24680 fdhC; Formate dehydrogenase, gamma subunit	K00127 fdoI; formate dehydrogenase subunit gamma
D      ToN1_44810 NADH-quinone oxidoreductase, 24kDa subunit	K00127 fdoI; formate dehydrogenase subunit gamma
D      ToN1_44770 Putative formate dehydrogenase, delta subunit	K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D      ToN1_41790 [4Fe-4S] iron-sulfur domain-containing protein	K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D      ToN1_35420 glyA1; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_42500 glyA2; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_45110 glyA3; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_49950 glyA4; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_13230 Putative hydroxypyruvate reductase	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      ToN1_43420 eno1; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_46510 eno2; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_34430 ppc1; Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      ToN1_43410 ppc2; Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      ToN1_47560 mdh; Malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      ToN1_02880 fbaA1; Fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      ToN1_34990 fbaA2; Fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      ToN1_33620 fbp2; Fructose-1,6-bisphosphatase class 1	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      ToN1_02830 fbp1; Fructose-1,6-bisphosphatase class 1	K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D      ToN1_36590 pfp; Pyrophosphate-fructose 6-phosphate 1-phosphotransferase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      ToN1_01780 qhpA1; Quinohemoprotein amine dehydrogenase, alpha subunit	K08685 qhpA; quinohemoprotein amine dehydrogenase [EC:1.4.9.1]
D      ToN1_38420 qhpA2; Quinohemoprotein amine dehydrogenase, alpha subunit	K08685 qhpA; quinohemoprotein amine dehydrogenase [EC:1.4.9.1]
D      ToN1_21290 ackA; Acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      ToN1_13780 pta; Phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      ToN1_21280 putative phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      ToN1_19180 AMP-dependent synthetase/ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_33490 Putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_40720 putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_44310 acsA4; Acetoacetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_46270 pps; Phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      ToN1_35350 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      ToN1_35430 Histidine phosphatase superfamily protein	K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      ToN1_23970 gpmI; Phosphoglycerate mutase (2,3-diphosphoglycerate-independent)	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      ToN1_04210 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      ToN1_15290 serC; Phosphoserine aminotransferase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      ToN1_01050 putative phosphoserine phosphatase	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D      ToN1_23390 thrH; Phosphorine phosphatase	K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D      ToN1_44380 Methyltransferase	K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D      ToN1_46670 2-phosphosulfolactate phosphatase	K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C    00910 Nitrogen metabolism [PATH:apet00910]
D      ToN1_00810 narK_narT; Nitrate/proton symporter	K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D      ToN1_00820 narK_narU; Nitrate/nitrite transporter	K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D      ToN1_33410 MFS transporter	K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D      ToN1_33330 Uncharacterized protein	K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D      ToN1_33340 nasB; Nitrate ABC transporter, permease protein	K15577 nrtB; nitrate/nitrite transport system permease protein
D      ToN1_33350 nasD; Nitrate ABC transporter, ATP-binding protein	K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D      ToN1_00830 narG; Respiratory nitrate reductase, alpha subunit	K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D      ToN1_00840 narH; Respiratory nitrate reductase, beta subunit	K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D      ToN1_00860 narI; Respiratory nitrate reductase, gamma subunit	K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D      ToN1_27790 napA; Periplasmic nitrate reductase, large subunit	K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D      ToN1_27820 napB; Periplasmic nitrate reductase, electron transfer subunit	K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D      ToN1_33430 Putative nitrate reductase	K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D      ToN1_33390 nirB; Nitrite reductase (NADH) large subunit	K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D      ToN1_33400 nirD3; Nitrite reductase (NADH) small subunit	K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D      ToN1_15170 nirS; Nitrite reductase	K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D      ToN1_44240 norB; Nitric oxide reductase, subunit B	K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D      ToN1_44250 norC; Nitric oxide reductase, subunit C	K02305 norC; nitric oxide reductase subunit C
D      ToN1_00920 nosZ; Nitrous-oxide reductase	K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D      ToN1_22010 Putative nitronate monooxygenase	K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D      ToN1_29780 gdh; NAD-glutamate dehydrogenase	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      ToN1_12440 NADP-specific glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      ToN1_47000 NADP-specific glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      ToN1_20100 gdhA; NADP-specific glutamate dehydrogenase	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      ToN1_21310 gltA1; Glutamate synthase [NADPH] large subunit	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      ToN1_21300 gltD; Glutamate synthase [NADPH] small subunit	K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D      ToN1_21820 Carbonic anhydrase	K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D      ToN1_29880 Carbonic anhydrase	K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D      ToN1_17660 Putative carbonic anhydrase	K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C    00920 Sulfur metabolism [PATH:apet00920]
D      ToN1_45470 cysP2; Sulfate ABC transporter, periplasmic binding protein	K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D      ToN1_36490 Sulfate ABC transporter periplasmic binding protein	K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D      ToN1_36470 cysT1; Sulfate ABC transporter, permease protein	K02046 cysU; sulfate/thiosulfate transport system permease protein
D      ToN1_45480 cysT2; Sulfate ABC transporter, permease protein	K02046 cysU; sulfate/thiosulfate transport system permease protein
D      ToN1_36460 cysW1; Sulfate ABC transporter, permease protein	K02047 cysW; sulfate/thiosulfate transport system permease protein
D      ToN1_45490 cysW2; Sulfate ABC transporter, permease protein	K02047 cysW; sulfate/thiosulfate transport system permease protein
D      ToN1_36450 cysA1; Sulfate ABC transporter, ATP-binding protein	K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D      ToN1_45500 cysA2; Sulfate ABC transporter, ATP-binding protein	K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D      ToN1_15620 cysC; Multifunctional fusion protein/Sulfate adenylyltransferase, large subunit	K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D      ToN1_22000 cysN; Sulfate adenylyltransferase, large subunit	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      ToN1_15630 cysD1; Sulfate adenylyltransferase, small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      ToN1_21980 cysD2; Sulfate adenylyltransferase, small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      ToN1_38780 Putative ATP adenylyltransferase	K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D      ToN1_15640 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ	K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D      ToN1_21960 cysH; Phosphoadenosine phosphosulfate reductase	K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D      ToN1_00360 DMSO reductase anchor subunit domain-containing protein, DmsC-like	K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D      ToN1_11120 putative thiosulfate-binding protein	K17226 soxY; sulfur-oxidizing protein SoxY
D      ToN1_41080 Putative sulfur-oxidizing protein SoxY	K17226 soxY; sulfur-oxidizing protein SoxY
D      ToN1_11110 Phosphodiesterase I	K17227 soxZ; sulfur-oxidizing protein SoxZ
D      ToN1_21940 Putative sulfite reductase	K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D      ToN1_45540 Putative pyridine nucleotide-disulfide oxidoreductase	K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D      ToN1_11140 Sulfide dehydrogenase, flavoprotein subunit	K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D      ToN1_02470 Putative Cytochrome c4-like protein	K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D      ToN1_11130 Putative cytochrome c	K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D      ToN1_43190 Metallo-beta-lactamase domain-containing protein	K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D      ToN1_24140 ttrA; Tetrathionate reductase, subunit A	K08357 ttrA; tetrathionate reductase subunit A
D      ToN1_24160 ttrB; Tetrathionate reductase, subunit B	K08358 ttrB; tetrathionate reductase subunit B
D      ToN1_24150 ttrC; Tetrathionate reductase, subunit C	K08359 ttrC; tetrathionate reductase subunit C
D      ToN1_11370 Putative thiosulfate sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      ToN1_09750 cysE; Serine O-acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      ToN1_34760 putative serine O-acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      ToN1_36430 cysK1; Cysteine synthase	K01738 cysK; cysteine synthase [EC:2.5.1.47]
D      ToN1_42740 cysK2; Cysteine synthase	K01738 cysK; cysteine synthase [EC:2.5.1.47]
D      ToN1_26470 metXS; Homoserine O-succinyltransferase	K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D      ToN1_21120 Cystathionine gamma-synthase	K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D      ToN1_37710 metZ; O-succinylhomoserine sulfhydrylase	K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D      ToN1_03270 AMP-dependent acyl-CoA synthetase/ligase	K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D      ToN1_22220 AMP-dependent synthetase/ligase	K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D      ToN1_02600 Acyl-CoA dehydrogenase	K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D      ToN1_09290 Acyl-CoA dehydrogenase	K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D      ToN1_45820 Acyl-CoA dehydrogenase	K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D      ToN1_09320 Enoyl-CoA hydratase/isomerase	K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
D      ToN1_34940 Uncharacterized protein	K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B  09103 Lipid metabolism
C    00061 Fatty acid biosynthesis [PATH:apet00061]
D      ToN1_16790 accA; Acetyl-CoA carboxylase carboxyl transferase, alpha subunit	K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D      ToN1_17270 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      ToN1_17280 accC; Biotin carboxylase	K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D      ToN1_37660 accD; Acetyl-CoA carboxylase carboxyl transferase, beta subunit	K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D      ToN1_15660 Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_10010 acpP; Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_40760 putative acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_47250 Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_47970 Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_10030 fabD1; Malonyl-CoA-acyl carrier protein transacylase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      ToN1_10040 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III	K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D      ToN1_47170 putative 3-oxoacyl-[acyl carrier protein] synthase	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      ToN1_10000 fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      ToN1_47980 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      ToN1_49990 fabF2; 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      ToN1_05910 NAD(P)-binding domain superfamily protein	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_06080 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_06530 Putative 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_10020 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_47140 Short-chain dehydrogenase/reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_48970 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_01180 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      ToN1_47220 FabA-like domain-containing protein	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      ToN1_47770 fabI1; Enoyl-[acyl-carrier-protein] reductase (NADH)	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      ToN1_49560 fabI2; Enoyl-[acyl-carrier-protein] reductase (NADH)	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      ToN1_20000 Long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      ToN1_37460 fadD; Long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C    00062 Fatty acid elongation
C    00071 Fatty acid degradation [PATH:apet00071]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_02610 3-ketoacyl-CoA thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_03670 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_06090 Acetyl-CoA acyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_21710 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_50340 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_06950 badK1; putative 4-isopropyl-1-cyclohexene-1-carboxyl-CoA hydratase, BadK-like	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_21760 fadB; Alpha-subunit of fatty acid oxidation complex	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_02320 Putative 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      ToN1_02620 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      ToN1_21720 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      ToN1_05770 Enoyl-CoA hydratase/isomerase	K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_04960 Acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      ToN1_29900 Acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      ToN1_03370 Acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_05070 Acyl-CoA dehydrogenase/oxidase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_05490 Acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_06450 Acyl-CoA dehydrogenase/oxidase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_06520 Acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_07400 acdA2; Acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_26870 Acyl-CoA dehydrogenase/oxidase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_50500 Acyl-CoA dehydrogenase/oxidase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_06430 Acyl-CoA dehydrogenase	K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D      ToN1_07000 acdA1; Acyl-CoA dehydrogenase	K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D      ToN1_21780 fadE; Acyl-CoA dehydrogenase	K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D      ToN1_25120 Glutaryl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      ToN1_20000 Long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      ToN1_37460 fadD; Long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      ToN1_27520 Long-chain-fatty-acid-CoA ligase	K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D      ToN1_06160 FAD/NAD(P)-dependent oxidoreductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D      ToN1_32260 Putative ferredoxin reductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D      ToN1_01030 rubB; Rubredoxin-NAD(+) reductase	K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D      ToN1_24900 Putative flavorubredoxin reductase (Nitric oxide reductase) reductase	K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D      ToN1_40590 S-(hydroxymethyl)glutathione dehydrogenase / class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00073 Cutin, suberine and wax biosynthesis
C    00074 Mycolic acid biosynthesis [PATH:apet00074]
D      ToN1_09840 acpS; Holo-[acyl-carrier-protein] synthase	K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D      ToN1_15660 Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_10010 acpP; Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_40760 putative acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_47250 Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_47970 Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_10030 fabD1; Malonyl-CoA-acyl carrier protein transacylase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C    00100 Steroid biosynthesis
C    00120 Primary bile acid biosynthesis
C    00121 Secondary bile acid biosynthesis
C    00140 Steroid hormone biosynthesis
C    00561 Glycerolipid metabolism [PATH:apet00561]
D      ToN1_13230 Putative hydroxypyruvate reductase	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_11340 glpK; Glycerol kinase	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      ToN1_10050 plsX; Phosphate acyltransferase	K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D      ToN1_10610 plsY; Glycerol-3-phosphate acyltransferase	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      ToN1_17360 Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      ToN1_32620 Putative phospholipid/glycerol acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      ToN1_17310 dgkA; Diacylglycerol kinase	K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C    00564 Glycerophospholipid metabolism [PATH:apet00564]
D      ToN1_35290 gpsA; Glycerol-3-phosphate dehydrogenase (NAD(P)+)	K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D      ToN1_11330 glpD; Glycerol-3-phosphate dehydrogenase	K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D      ToN1_35870 Putative Fe-S oxidoreductase	K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D      ToN1_10610 plsY; Glycerol-3-phosphate acyltransferase	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      ToN1_17360 Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      ToN1_32620 Putative phospholipid/glycerol acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      ToN1_17310 dgkA; Diacylglycerol kinase	K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D      ToN1_11580 ugpQ; Glycerophosphoryl diester phosphodiesterase	K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D      ToN1_27520 Long-chain-fatty-acid-CoA ligase	K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D      ToN1_40530 eutB; Ethanolamine ammonia-lyase heavy chain	K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D      ToN1_40520 eutC; Ethanolamine ammonia-lyase light chain	K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D      ToN1_27030 Ribosomal RNA adenine methyltransferase family protein	K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D      ToN1_01240 Phosphatidate cytidylyltransferase family protein	K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D      ToN1_14290 pssA; putative CDP-diacylglycerol--serine O-phosphatidyltransferase	K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D      ToN1_14280 psd; Phosphatidylserine decarboxylase proenzyme	K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D      ToN1_09810 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D      ToN1_22300 pgpA; Phosphatidylglycerophosphatase A	K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D      ToN1_31670 clsB; Cardiolipin synthase B	K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D      ToN1_13810 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C    00565 Ether lipid metabolism
C    00600 Sphingolipid metabolism
C    00590 Arachidonic acid metabolism
C    00591 Linoleic acid metabolism
C    00592 alpha-Linolenic acid metabolism [PATH:apet00592]
D      ToN1_02610 3-ketoacyl-CoA thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_03670 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_06090 Acetyl-CoA acyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_21710 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_50340 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    01040 Biosynthesis of unsaturated fatty acids [PATH:apet01040]
D      ToN1_08540 SGNH hydrolase-type esterase domain-containing protein	K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D      ToN1_04790 Acyl-CoA thioesterase	K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D      ToN1_21750 Acyl-CoA thioesterase	K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B  09104 Nucleotide metabolism
C    00230 Purine metabolism [PATH:apet00230]
D      ToN1_38190 putative NUDIX family hydrolase	K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D      ToN1_35590 pgm; Phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      ToN1_23000 prs1; Ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      ToN1_31810 prs2; Ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      ToN1_37700 purF; Amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D      ToN1_34490 purD; Phosphoribosylamine--glycine ligase	K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D      ToN1_14610 purN; Phosphoribosylglycinamide formyltransferase	K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D      ToN1_46390 purL; Phosphoribosylformylglycinamidine synthase	K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D      ToN1_14090 purM; Phosphoribosylformylglycinamidine cyclo-ligase	K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D      ToN1_40320 purK; N5-carboxyaminoimidazole ribonucleotide synthase	K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D      ToN1_40310 purE; N5-carboxyaminoimidazole ribonucleotide mutase	K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D      ToN1_34900 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase	K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D      ToN1_16920 purB; Adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      ToN1_34500 purH; Bifunctional purine biosynthesis protein	K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D      ToN1_33470 apt; Adenine phosphoribosyltransferase	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      ToN1_15000 surE; 5'-nucleotidase	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      ToN1_36690 ppnP; Pyrimidine/purine nucleoside phosphorylase	K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D      ToN1_37320 Polyphenol oxidase	K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D      ToN1_22710 Putative hypoxanthine-guanine phosphoribosyltransferase	K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D      ToN1_33460 Phosphoribosyltransferase	K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D      ToN1_47860 guaB; Inosine-5'-monophosphate dehydrogenase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      ToN1_33140 ndk; Nucleoside diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      ToN1_23580 dITP/XTP pyrophosphatase	K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D      ToN1_00450 Putative 4-hydroxybenzoyl-CoA reductase, alpha subunit	K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D      ToN1_12650 xdhA; Xanthine dehydrogenase, small subunit	K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D      ToN1_12640 xdhB; Xanthine dehydrogenase, molybdopterin binding subunit	K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D      ToN1_47870 guaA; GMP synthase (glutamine-hydrolyzing)	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      ToN1_12620 guaD1; Guanine deaminase	K01487 guaD; guanine deaminase [EC:3.5.4.3]
D      ToN1_36260 guaD2; Guanine deaminase	K01487 guaD; guanine deaminase [EC:3.5.4.3]
D      ToN1_27660 gmk; Guanylate kinase	K00942 gmk; guanylate kinase [EC:2.7.4.8]
D      ToN1_38200 Vitamin B12-dependent ribonucleotide reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      ToN1_21330 Deoxyguanosinetriphosphate triphosphohydrolase-like protein	K01129 dgt; dGTPase [EC:3.1.5.1]
D      ToN1_08120 Uncharacterized protein	K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D      ToN1_27680 spoT; Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D      ToN1_45720 ppx; Exopolyphosphatase	K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D      ToN1_45690 relA; GTP pyrophosphokinase	K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D      ToN1_02280 Putative adenylate/guanylate cyclase	K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D      ToN1_47510 Nucleotide cyclase family protein	K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D      ToN1_33290 purA; Adenylosuccinate synthetase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      ToN1_17330 Carbohydrate kinase family protein	K00856 ADK; adenosine kinase [EC:2.7.1.20]
D      ToN1_45400 Putative monophosphate nucleosidase	K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D      ToN1_36580 adk; Adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      ToN1_38780 Putative ATP adenylyltransferase	K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D      ToN1_17370 apaH; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical	K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D      ToN1_15620 cysC; Multifunctional fusion protein/Sulfate adenylyltransferase, large subunit	K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D      ToN1_22000 cysN; Sulfate adenylyltransferase, large subunit	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      ToN1_15630 cysD1; Sulfate adenylyltransferase, small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      ToN1_21980 cysD2; Sulfate adenylyltransferase, small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      ToN1_12700 uraH; 5-hydroxyisourate hydrolase	K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D      ToN1_12740 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase	K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D      ToN1_12550 Racemase family protein	K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D      ToN1_43260 Racemase family protein	K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D      ToN1_12510 putative allantoinase	K16842 hpxB; allantoinase [EC:3.5.2.5]
D      ToN1_12580 alc1; putative allantoicase	K01477 alc; allantoicase [EC:3.5.3.4]
D      ToN1_12780 alc2; putative allantoicase	K01477 alc; allantoicase [EC:3.5.3.4]
D      ToN1_12590 allA1; Ureidoglycolate lyase	K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D      ToN1_12800 allA2; Ureidoglycolate lyase	K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
C    00240 Pyrimidine metabolism [PATH:apet00240]
D      ToN1_37920 carB; Carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      ToN1_37910 carA; Carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      ToN1_18040 pyrB; Aspartate carbamoyltransferase	K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D      ToN1_17180 pyrC1; Dihydroorotase	K01465 URA4; dihydroorotase [EC:3.5.2.3]
D      ToN1_18050 pyrC2; Dihydroorotase	K01465 URA4; dihydroorotase [EC:3.5.2.3]
D      ToN1_47420 pyrD; Dihydroorotate dehydrogenase (quinone)	K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D      ToN1_22620 pyrE; Orotate phosphoribosyltransferase	K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D      ToN1_21520 pyrF; Orotidine 5'-phosphate decarboxylase	K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D      ToN1_01270 pyrH; Uridylate kinase	K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D      ToN1_33140 ndk; Nucleoside diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      ToN1_30580 Maf-like protein	K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D      ToN1_43370 putative protein DUF45	K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D      ToN1_46490 pyrG; CTP synthase	K01937 pyrG; CTP synthase [EC:6.3.4.2]
D      ToN1_15000 surE; 5'-nucleotidase	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      ToN1_36690 ppnP; Pyrimidine/purine nucleoside phosphorylase	K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D      ToN1_22700 upp; Uracil Phosphoribosyltransferase	K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D      ToN1_18030 Phosphoribosyl transferase domain-containing protein	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D      ToN1_08810 putative phosphoribosyltransferase	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D      ToN1_45400 Putative monophosphate nucleosidase	K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D      ToN1_10290 dcd; dCTP deaminase	K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D      ToN1_38200 Vitamin B12-dependent ribonucleotide reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      ToN1_49610 dCTP pyrophosphatase 1 family protein	K16904 DCTPP1; dCTP diphosphatase [EC:3.6.1.12]
D      ToN1_08120 Uncharacterized protein	K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D      ToN1_39710 tmk; Thymidylate kinase	K00943 tmk; dTMP kinase [EC:2.7.4.9]
D      ToN1_11160 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      ToN1_10260 thyA; Thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D      ToN1_43330 hydA; D-hydantoinase	K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B  09105 Amino acid metabolism
C    00250 Alanine, aspartate and glutamate metabolism [PATH:apet00250]
D      ToN1_09980 nadB; L-aspartate oxidase	K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D      ToN1_00140 putative L-asparaginase	K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D      ToN1_21910 L-asparaginase II	K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D      ToN1_12480 ansB; L-asparaginase II	K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D      ToN1_15880 Asparagine synthase	K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D      ToN1_15960 Asparagine synthase, exosortase system type 1 associated	K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D      ToN1_38890 asnB; Asparagine synthetase	K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D      ToN1_38960 alaA; Glutamate-pyruvate aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      ToN1_25180 ald; Alanine dehydrogenase	K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D      ToN1_38500 aspA; Aspartate ammonia-lyase	K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D      ToN1_36670 argG; Argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      ToN1_34410 argH; Argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      ToN1_33290 purA; Adenylosuccinate synthetase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      ToN1_16920 purB; Adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      ToN1_18040 pyrB; Aspartate carbamoyltransferase	K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D      ToN1_08650 gabD; Succinate-semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      ToN1_21310 gltA1; Glutamate synthase [NADPH] large subunit	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      ToN1_21300 gltD; Glutamate synthase [NADPH] small subunit	K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D      ToN1_29780 gdh; NAD-glutamate dehydrogenase	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      ToN1_12440 NADP-specific glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      ToN1_47000 NADP-specific glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      ToN1_20100 gdhA; NADP-specific glutamate dehydrogenase	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      ToN1_33640 putA; Bifunctional protein	K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D      ToN1_37920 carB; Carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      ToN1_37910 carA; Carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      ToN1_21260 glmS; Glutamine--fructose-6-phosphate aminotransferase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      ToN1_37700 purF; Amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C    00260 Glycine, serine and threonine metabolism [PATH:apet00260]
D      ToN1_14520 lysC; Aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      ToN1_37570 asd; Aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      ToN1_38970 hom; Homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      ToN1_30670 thrB; Homoserine kinase	K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D      ToN1_23390 thrH; Phosphorine phosphatase	K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D      ToN1_38980 thrC; Threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      ToN1_35420 glyA1; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_42500 glyA2; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_45110 glyA3; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_49950 glyA4; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_13230 Putative hydroxypyruvate reductase	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      ToN1_35350 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      ToN1_35430 Histidine phosphatase superfamily protein	K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      ToN1_23970 gpmI; Phosphoglycerate mutase (2,3-diphosphoglycerate-independent)	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      ToN1_04210 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      ToN1_15290 serC; Phosphoserine aminotransferase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      ToN1_01050 putative phosphoserine phosphatase	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D      ToN1_08340 gcvP1; Glycine dehydrogenase (decarboxylating)	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      ToN1_42470 gcvP2; Glycine dehydrogenase (decarboxylating)	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      ToN1_42530 gcvT; Glycine cleavage T-protein	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_08330 gcvH1; Glycine cleavage system H protein	K02437 gcvH; glycine cleavage system H protein
D      ToN1_42460 gcvH2; Glycine cleavage system H protein	K02437 gcvH; glycine cleavage system H protein
D      ToN1_50180 Creatinase	K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D      ToN1_14290 pssA; putative CDP-diacylglycerol--serine O-phosphatidyltransferase	K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D      ToN1_03890 betA1; Oxygen-dependent choline dehydrogenase	K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D      ToN1_44920 betA2; Oxygen-dependent choline dehydrogenase	K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D      ToN1_44910 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase	K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D      ToN1_44640 Putative aromatic ring-hydroxylating dioxygenase, alpha subunit	K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D      ToN1_44650 Oxidoreductase FAD-binding subunit	K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D      ToN1_44760 2Fe-2S ferredoxin-like superfamily protein	K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D      ToN1_44490 putative 2,4-dienoyl-CoA reductase	K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
D      ToN1_44500 putative 4Fe-4S oxidoreductase	K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
D      ToN1_44510 Electron transfer flavoprotein, alpha subunit	K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha
D      ToN1_44520 Electron transfer flavoprotein, beta subunit	K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta
D      ToN1_45150 soxA1; Sarcosine oxidase, alpha subunit	K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D      ToN1_49910 soxA2; Sarcosine oxidase, alpha subunit	K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D      ToN1_45130 soxB1; Sarcosine oxidase, beta subunit	K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D      ToN1_49930 soxB2; Sarcosine oxidase, beta subunit	K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D      ToN1_45160 soxG1; Sarcosine oxidase, gamma subunit	K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D      ToN1_49900 soxG2; Sarcosine oxidase, gamma subunit	K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D      ToN1_45140 soxD1; Sarcosine oxidase, delta subunit	K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D      ToN1_49920 soxD2; Sarcosine oxidase, delta subunit	K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D      ToN1_42520 sdaA1; L-serine dehydratase	K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D      ToN1_45120 sdaA2; L-serine dehydratase	K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D      ToN1_49940 L-serine ammonia-lyase	K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D      ToN1_21060 Putative L-threonine dehydratase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      ToN1_22390 ilvA; L-threonine dehydratase, biosynthetic	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      ToN1_23400 tdcB; L-threonine dehydratase, catabolic	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      ToN1_42600 dsdA; putative D-serine dehydratase	K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D      ToN1_37650 trpA; Tryptophan synthase, alpha subunit	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      ToN1_37640 trpB2; Tryptophan synthase, beta subunit	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      ToN1_31550 trpB1; Tryptophan synthase, beta subunit	K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      ToN1_21090 doeA1; Ectoine hydrolase	K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
D      ToN1_21100 doeA2; Ectoine hydrolase	K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
D      ToN1_21110 doeB; N-alpha-acetyl diaminobutyric acid deacetylase	K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125]
C    00270 Cysteine and methionine metabolism [PATH:apet00270]
D      ToN1_09750 cysE; Serine O-acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      ToN1_34760 putative serine O-acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      ToN1_36430 cysK1; Cysteine synthase	K01738 cysK; cysteine synthase [EC:2.5.1.47]
D      ToN1_42740 cysK2; Cysteine synthase	K01738 cysK; cysteine synthase [EC:2.5.1.47]
D      ToN1_19140 putative pyridoxal phosphate-dependent aminotransferase	K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D      ToN1_23030 metH; Methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      ToN1_45060 Putative methyltransferase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      ToN1_30440 metK; S-adenosylmethionine synthase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      ToN1_00520 Polyamine biosynthesis domain-containing protein	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      ToN1_11560 Polyamine aminopropyltransferase	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      ToN1_25390 speE; Polyamine aminopropyltransferase	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      ToN1_37320 Polyphenol oxidase	K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D      ToN1_15310 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase	K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D      ToN1_09540 Putative 6-oxopurine nucleoside phosphorylase	K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D      ToN1_18960 mtnA; Methylthioribose-1-phosphate isomerase	K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D      ToN1_10160 aspC; Aspartate aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_33760 pat; Aromatic-amino-acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_30360 ahcY; Adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      ToN1_14520 lysC; Aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      ToN1_37570 asd; Aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      ToN1_38970 hom; Homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      ToN1_26470 metXS; Homoserine O-succinyltransferase	K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D      ToN1_21120 Cystathionine gamma-synthase	K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D      ToN1_00740 O-acetylhomoserine sulfhydrylase	K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D      ToN1_38280 O-actelyhomoserine aminocarboxypropyltransferase	K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D      ToN1_37710 metZ; O-succinylhomoserine sulfhydrylase	K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D      ToN1_35620 ilvE; Branched-chain-amino-acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      ToN1_23480 gshA; Glutamate--cysteine ligase	K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D      ToN1_23470 gshB; Glutathione synthetase	K01920 gshB; glutathione synthase [EC:6.3.2.3]
D      ToN1_11370 Putative thiosulfate sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      ToN1_47560 mdh; Malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      ToN1_42520 sdaA1; L-serine dehydratase	K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D      ToN1_45120 sdaA2; L-serine dehydratase	K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D      ToN1_49940 L-serine ammonia-lyase	K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D      ToN1_15200 cysM; Cysteine synthase B	K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D      ToN1_48830 Cysteine synthase	K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D      ToN1_04210 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      ToN1_15290 serC; Phosphoserine aminotransferase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C    00280 Valine, leucine and isoleucine degradation [PATH:apet00280]
D      ToN1_35620 ilvE; Branched-chain-amino-acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      ToN1_16390 putative Glu/Leu/Phe/Val dehydrogenase	K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D      ToN1_46970 pdhA2; Pyruvate dehydrogenase E1 component, alpha subunit	K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D      ToN1_46960 pdhB2; Pyruvate dehydrogenase E1 component, beta subunit	K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D      ToN1_46950 pdhC2; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_04960 Acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      ToN1_29900 Acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      ToN1_03370 Acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_05070 Acyl-CoA dehydrogenase/oxidase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_05490 Acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_06450 Acyl-CoA dehydrogenase/oxidase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_06520 Acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_07400 acdA2; Acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_26870 Acyl-CoA dehydrogenase/oxidase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_50500 Acyl-CoA dehydrogenase/oxidase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      ToN1_36200 Isovaleryl-CoA dehydrogenase	K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_06950 badK1; putative 4-isopropyl-1-cyclohexene-1-carboxyl-CoA hydratase, BadK-like	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_21760 fadB; Alpha-subunit of fatty acid oxidation complex	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_02610 3-ketoacyl-CoA thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_03670 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_06090 Acetyl-CoA acyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_21710 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_50340 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_20250 pccA; Propionyl-CoA carboxylase, alpha subunit	K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D      ToN1_20270 pccB; Propionyl-CoA carboxylase, beta subunit	K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D      ToN1_20290 sbmB; Methylmalonyl-CoA mutase, beta subunit	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      ToN1_50390 Methylmalonyl-CoA mutase, C-terminal domain-containing protein	K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D      ToN1_50400 sbmA; Methylmalonyl-CoA mutase, alpha subunit	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      ToN1_29060 mmsA; Methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_29070 Aminotransferase class-III	K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D      ToN1_36220 mccA; Methylcrotonoyl-CoA carboxylase, alpha subunit	K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D      ToN1_36210 mccB; Methylcrotonoyl-CoA carboxylase, beta subunit	K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D      ToN1_29910 Enoyl-CoA hydratase/isomerase	K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D      ToN1_29920 Hydroxymethylglutaryl-CoA lyase	K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D      ToN1_19170 scoA; Succinyl-CoA:3-oxoacid CoA transferase subunit A	K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D      ToN1_19160 scoB; Succinyl-CoA:3-oxoacid CoA transferase, subunit B	K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D      ToN1_07350 acsA1; Acetoacetyl-CoA synthetase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      ToN1_36250 acsA2; Acetoacetyl-CoA synthetase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      ToN1_43950 acsA3; Acetoacetyl-CoA synthetase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C    00290 Valine, leucine and isoleucine biosynthesis [PATH:apet00290]
D      ToN1_21060 Putative L-threonine dehydratase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      ToN1_22390 ilvA; L-threonine dehydratase, biosynthetic	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      ToN1_23400 tdcB; L-threonine dehydratase, catabolic	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      ToN1_37540 leuC; 3-isopropylmalate dehydratase large subunit	K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D      ToN1_37550 leuD; 3-isopropylmalate dehydratase small subunit	K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D      ToN1_37560 leuB; 3-isopropylmalate dehydrogenase	K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D      ToN1_02140 Putative acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_14250 ilvI; Acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_37480 ilvB; Acetolactate synthase isozyme 1, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_14260 ilvH; Acetolactate synthase, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      ToN1_37490 ilvN; Acetolactate synthase isozyme 1, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      ToN1_14270 ilvC; Ketol-acid reductoisomerase (NADP(+))	K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D      ToN1_18450 ilvD; Dihydroxy-acid dehydratase	K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D      ToN1_35620 ilvE; Branched-chain-amino-acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      ToN1_16390 putative Glu/Leu/Phe/Val dehydrogenase	K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D      ToN1_38960 alaA; Glutamate-pyruvate aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      ToN1_14420 leuA2; 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D      ToN1_13090 leuA1; 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C    00300 Lysine biosynthesis [PATH:apet00300]
D      ToN1_38970 hom; Homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      ToN1_14520 lysC; Aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      ToN1_37570 asd; Aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      ToN1_14910 dapA; 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      ToN1_44720 Putative 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      ToN1_37900 dapB; 4-hydroxy-tetrahydrodipicolinate reductase	K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D      ToN1_09610 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D      ToN1_36650 argD; Acetylornithine aminotransferase	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      ToN1_09600 dapL; Succinyldiaminopimelate transaminase	K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D      ToN1_09630 dapE; Succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      ToN1_30480 dapF; Diaminopimelate epimerase	K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D      ToN1_15680 Diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      ToN1_21430 lysA; Diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      ToN1_46620 Putative aminotransferase	K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D      ToN1_17120 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      ToN1_17110 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C    00310 Lysine degradation [PATH:apet00310]
D      ToN1_49480 Aldehyde dehydrogenase	K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D      ToN1_47650 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_25120 Glutaryl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_06950 badK1; putative 4-isopropyl-1-cyclohexene-1-carboxyl-CoA hydratase, BadK-like	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_21760 fadB; Alpha-subunit of fatty acid oxidation complex	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_08650 gabD; Succinate-semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      ToN1_33770 CoA-transferase family III protein	K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D      ToN1_41340 L-lysine 2,3-aminomutase	K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D      ToN1_41370 D-lysine 5,6-aminomutase, alpha subunit	K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D      ToN1_41380 L-beta-lysine 5,6-aminomutase, beta subunit	K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
D      ToN1_41350 Putative L-erythro-3,5-diaminohexanoate dehydrogenase	K18012 kdd; L-erythro-3,5-diaminohexanoate dehydrogenase [EC:1.4.1.11]
D      ToN1_41400 3-keto-5-aminohexanoate cleavage enzyme	K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D      ToN1_41390 Putative 3-aminobutyryl-CoA ammonia lyase	K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14]
D      ToN1_03700 atoD; Acetate CoA-transferase, alpha subunit	K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D      ToN1_03690 atoA; Acetate CoA-transferase, beta subunit	K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D      ToN1_24230 Putative D-alanine aminotransferase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00220 Arginine biosynthesis [PATH:apet00220]
D      ToN1_36660 argF; Ornithine carbamoyltransferase	K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D      ToN1_36670 argG; Argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      ToN1_34410 argH; Argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      ToN1_41540 Arginase	K01476 rocF; arginase [EC:3.5.3.1]
D      ToN1_12480 ansB; L-asparaginase II	K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D      ToN1_37920 carB; Carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      ToN1_37910 carA; Carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      ToN1_29780 gdh; NAD-glutamate dehydrogenase	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      ToN1_12440 NADP-specific glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      ToN1_47000 NADP-specific glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      ToN1_20100 gdhA; NADP-specific glutamate dehydrogenase	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      ToN1_38960 alaA; Glutamate-pyruvate aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      ToN1_35140 argA; Amino-acid acetyltransferase	K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D      ToN1_16950 argJ; Arginine biosynthesis bifunctional protein	K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D      ToN1_15610 argB; Acetylglutamate kinase	K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D      ToN1_35960 argC; N-acetyl-gamma-glutamyl-phosphate reductase	K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D      ToN1_36650 argD; Acetylornithine aminotransferase	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C    00330 Arginine and proline metabolism [PATH:apet00330]
D      ToN1_50360 Hydantoinase A/oxoprolinase domain-containing protein	K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D      ToN1_50070 Hydantoinase B/oxoprolinase domain-containing protein	K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D      ToN1_50370 Hydantoinase B/oxoprolinase domain-containing protein	K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D      ToN1_50180 Creatinase	K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D      ToN1_10280 Ornithine/lysine/arginine decarboxylase	K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D      ToN1_00160 Ureohydrolase family protein	K01480 speB; agmatinase [EC:3.5.3.11]
D      ToN1_03870 Agmatinase	K01480 speB; agmatinase [EC:3.5.3.11]
D      ToN1_00520 Polyamine biosynthesis domain-containing protein	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      ToN1_11560 Polyamine aminopropyltransferase	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      ToN1_25390 speE; Polyamine aminopropyltransferase	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_50590 Amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      ToN1_41170 Arginine N-succinyltransferase	K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D      ToN1_41180 Arginine N-succinyltransferase	K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D      ToN1_44710 aldA7; Aldehyde dehydrogenase	K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D      ToN1_41540 Arginase	K01476 rocF; arginase [EC:3.5.3.1]
D      ToN1_29720 rocD; Ornithine--oxo-acid transaminase	K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D      ToN1_18080 proC; Pyrroline-5-carboxylate reductase	K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D      ToN1_33640 putA; Bifunctional protein	K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D      ToN1_36090 Ornithine cyclodeaminase	K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D      ToN1_11780 proB; Glutamate 5-kinase	K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D      ToN1_10530 proA; Gamma-glutamyl phosphate reductase	K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D      ToN1_43540 pip; Proline iminopeptidase	K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D      ToN1_24230 Putative D-alanine aminotransferase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C    00340 Histidine metabolism [PATH:apet00340]
D      ToN1_32840 hisG; ATP phosphoribosyltransferase	K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D      ToN1_33280 hisZ; ATP phosphoribosyltransferase regulatory subunit	K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D      ToN1_32930 hisE; Phosphoribosyl-ATP pyrophosphatase	K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D      ToN1_32920 hisI; Phosphoribosyl-AMP cyclohydrolase	K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D      ToN1_32900 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D      ToN1_32890 hisH; Imidazole glycerol phosphate synthase, subunit H	K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D      ToN1_32910 hisF; Imidazole glycerol phosphate synthase, subunit F	K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D      ToN1_32880 hisB; Imidazoleglycerol-phosphate dehydratase	K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D      ToN1_23290 hisC1; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_32860 hisC2; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_32850 hisD; Histidinol dehydrogenase	K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D      ToN1_36040 hutH; Histidine ammonia-lyase	K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D      ToN1_36050 hutU; Urocanate hydratase	K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D      ToN1_36070 hutI; Imidazolonepropionase	K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D      ToN1_36060 hutG; Formimidoylglutamase	K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00350 Tyrosine metabolism [PATH:apet00350]
D      ToN1_23290 hisC1; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_32860 hisC2; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_10160 aspC; Aspartate aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_33760 pat; Aromatic-amino-acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_22800 nagL; Maleylpyruvate/Maleylacetoacetate isomerase	K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D      ToN1_43070 Uncharacterized protein	K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D      ToN1_43940 Putative fumarylacetoacetate hydrolase	K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D      ToN1_03920 Aldehyde dehydrogenase	K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D      ToN1_38410 aldA4; Aldehyde dehydrogenase	K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D      ToN1_40590 S-(hydroxymethyl)glutathione dehydrogenase / class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      ToN1_08650 gabD; Succinate-semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      ToN1_35920 Tryptophanase	K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
D      ToN1_07220 iod; 4-isopropylbenzyl alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      ToN1_18520 nagK; Fumarylpyruvate hydrolase	K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C    00360 Phenylalanine metabolism [PATH:apet00360]
D      ToN1_03920 Aldehyde dehydrogenase	K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D      ToN1_38410 aldA4; Aldehyde dehydrogenase	K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D      ToN1_02390 paaK1; Phenylacetate-CoA ligase	K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D      ToN1_05040 Putative phenylacetate-CoA ligase	K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D      ToN1_08960 AMP-dependent synthetase/ligase	K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D      ToN1_28840 paaK2; Phenylacetate-CoA ligase	K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D      ToN1_39610 padJ; Phenylacetate-CoA ligase	K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D      ToN1_28830 paaI; Acyl-CoA thioesterase	K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D      ToN1_02450 paaA1; 1,2-phenylacetyl-CoA epoxidase, subunit A	K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D      ToN1_28850 paaA2; 1,2-phenylacetyl-CoA epoxidase, subunit A	K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D      ToN1_02440 paaB1; 1,2-phenylacetyl-CoA epoxidase, subunit B	K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D      ToN1_28860 paaB2; 1,2-phenylacetyl-CoA epoxidase, subunit B	K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D      ToN1_02430 paaC1; 1,2-phenylacetyl-CoA epoxidase, subunit C	K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D      ToN1_28870 paaC2; 1,2-phenylacetyl-CoA epoxidase, subunit C	K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D      ToN1_02420 paaD1; 1,2-phenylacetyl-CoA epoxidase, subunit D	K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D      ToN1_28880 paaD2; 1,2-phenylacetyl-CoA epoxidase, subunit D	K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D      ToN1_02410 paaE1; 1,2-phenylacetyl-CoA epoxidase, subunit E	K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D      ToN1_28890 paaE2; 1,2-phenylacetyl-CoA epoxidase, subunit E	K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D      ToN1_04810 Putative enoyl-CoA hydratase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      ToN1_07340 Enoyl-CoA hydratase/isomerase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      ToN1_21700 Enoyl-CoA hydratase/isomerase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      ToN1_28810 paaG; 1,2-epoxyphenylacetyl-CoA isomerase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      ToN1_32480 Enoyl-CoA hydratase/isomerase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_06100 3-hydroxyacyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_28820 paaH1; 3-hydroxyadipyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_32150 hbd1; 3-hydroxybutanoyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_37410 hbd2; 3-hydroxybutanoyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_46830 paaH2; 3-hydroxyadipyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_39530 padB; Phenylacetyl-CoA:acceptor oxidoreductase	K18361 padB; phenylacetyl-CoA:acceptor oxidoreductase [EC:1.17.5.1 3.1.2.25]
D      ToN1_39540 padC; Phenylacetyl-CoA:acceptor oxidoreductase	K18362 padC; phenylacetyl-CoA:acceptor oxidoreductase 27-kDa subunit
D      ToN1_39550 padD; Phenylacetyl-CoA:acceptor oxidoreductase	K18363 padD; phenylacetyl-CoA:acceptor oxidoreductase 26-kDa subunit
D      ToN1_39520 fdhD2; Sulfur carrier protein	K18360 padA; phenylacetyl-CoA:acceptor oxidoreductase accessory protein
D      ToN1_00310 padG1; Phenylglyoxylate:acceptor oxidoreductase	K18355 padG; phenylglyoxylate dehydrogenase alpha subunit [EC:1.2.1.58]
D      ToN1_39580 padG2; Phenylglyoxylate:acceptor oxidoreductase	K18355 padG; phenylglyoxylate dehydrogenase alpha subunit [EC:1.2.1.58]
D      ToN1_00290 padI1; Phenylglyoxylate:acceptor oxidoreductase	K18356 padI; phenylglyoxylate dehydrogenase beta subunit [EC:1.2.1.58]
D      ToN1_39600 padI2; Phenylglyoxylate:acceptor oxidoreductase	K18356 padI; phenylglyoxylate dehydrogenase beta subunit [EC:1.2.1.58]
D      ToN1_00330 padE1; Phenylglyoxylate:acceptor oxidoreductase	K18357 padE; phenylglyoxylate dehydrogenase gamma subunit [EC:1.2.1.58]
D      ToN1_39560 padE2; Phenylglyoxylate:acceptor oxidoreductase	K18357 padE; phenylglyoxylate dehydrogenase gamma subunit [EC:1.2.1.58]
D      ToN1_00320 padF1; Phenylglyoxylate:acceptor oxidoreductase	K18358 padF; phenylglyoxylate dehydrogenase delta subunit [EC:1.2.1.58]
D      ToN1_39570 padF2; Phenylglyoxylate:acceptor oxidoreductase	K18358 padF; phenylglyoxylate dehydrogenase delta subunit [EC:1.2.1.58]
D      ToN1_00300 padH1; Phenylglyoxylate:acceptor oxidoreductase	K18359 padH; phenylglyoxylate dehydrogenase epsilon subunit [EC:1.2.1.58]
D      ToN1_39590 padH2; Phenylglyoxylate:acceptor oxidoreductase	K18359 padH; phenylglyoxylate dehydrogenase epsilon subunit [EC:1.2.1.58]
D      ToN1_23290 hisC1; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_32860 hisC2; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_10160 aspC; Aspartate aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_33760 pat; Aromatic-amino-acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_07220 iod; 4-isopropylbenzyl alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      ToN1_28650 dadA; D-amino acid dehydrogenase	K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D      ToN1_33610 putative D-amino acid dehydrogenase	K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D      ToN1_24230 Putative D-alanine aminotransferase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      ToN1_42850 katG; Catalase-peroxidase	K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D      ToN1_50590 Amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      ToN1_09420 Ferredoxin, 2Fe-2S-type	K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D      ToN1_06160 FAD/NAD(P)-dependent oxidoreductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D      ToN1_32260 Putative ferredoxin reductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D      ToN1_22820 FAD-binding domain-containing protein	K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D      ToN1_43910 FAD-binding domain-containing protein	K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
C    00380 Tryptophan metabolism [PATH:apet00380]
D      ToN1_47650 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_25120 Glutaryl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_06950 badK1; putative 4-isopropyl-1-cyclohexene-1-carboxyl-CoA hydratase, BadK-like	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_21760 fadB; Alpha-subunit of fatty acid oxidation complex	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_46880 pdc; Phenylpyruvate decarboxylase	K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D      ToN1_50590 Amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      ToN1_42850 katG; Catalase-peroxidase	K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C    00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:apet00400]
D      ToN1_01040 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      ToN1_35550 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      ToN1_21340 aroB; 3-dehydroquinate synthase	K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D      ToN1_17260 aroQ; 3-dehydroquinate dehydratase	K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D      ToN1_17870 aroE; Shikimate dehydrogenase (NADP(+))	K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D      ToN1_21350 aroK1; Shikimate kinase	K00891 aroK; shikimate kinase [EC:2.7.1.71]
D      ToN1_15260 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase	K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D      ToN1_37510 aroC; Chorismate synthase	K01736 aroC; chorismate synthase [EC:4.2.3.5]
D      ToN1_16510 trpE; Anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      ToN1_16500 trpG; Anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      ToN1_16490 trpD; Anthranilate phosphoribosyltransferase	K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D      ToN1_37630 trpF; N-(5'-phosphoribosyl)anthranilate isomerase	K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D      ToN1_16480 trpC; Indole-3-glycerol phosphate synthase	K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D      ToN1_37650 trpA; Tryptophan synthase, alpha subunit	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      ToN1_37640 trpB2; Tryptophan synthase, beta subunit	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      ToN1_31550 trpB1; Tryptophan synthase, beta subunit	K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      ToN1_15280 pheA; Bifunctional P-protein, chorismate mutase/prephenate dehydratase	K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D      ToN1_15270 tyrA; Prephenate dehydrogenase	K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D      ToN1_23290 hisC1; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_32860 hisC2; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_10160 aspC; Aspartate aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_33760 pat; Aromatic-amino-acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_47100 Uncharacterized protein	K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B  09106 Metabolism of other amino acids
C    00410 beta-Alanine metabolism [PATH:apet00410]
D      ToN1_04730 panD; Aspartate 1-decarboxylase	K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_14180 panC; Pantothenate synthetase	K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D      ToN1_43330 hydA; D-hydantoinase	K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D      ToN1_29070 Aminotransferase class-III	K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_06950 badK1; putative 4-isopropyl-1-cyclohexene-1-carboxyl-CoA hydratase, BadK-like	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_21760 fadB; Alpha-subunit of fatty acid oxidation complex	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_04960 Acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      ToN1_29900 Acyl-CoA dehydrogenase	K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D      ToN1_18480 Malonyl-CoA decarboxylase	K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D      ToN1_29060 mmsA; Methylmalonate-semialdehyde dehydrogenase (CoA acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C    00430 Taurine and hypotaurine metabolism [PATH:apet00430]
D      ToN1_36600 ggt; Gamma-glutamyltranspeptidase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      ToN1_25180 ald; Alanine dehydrogenase	K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D      ToN1_29780 gdh; NAD-glutamate dehydrogenase	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      ToN1_13600 SnoaL-like domain-containing protein	K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-]
D      ToN1_13590 FAD dependent oxidoreductase family protein	K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-]
D      ToN1_13640 xsc; Sulfoacetaldehyde acetyltransferase	K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D      ToN1_13780 pta; Phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      ToN1_21280 putative phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      ToN1_21290 ackA; Acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
C    00440 Phosphonate and phosphinate metabolism
C    00450 Selenocompound metabolism [PATH:apet00450]
D      ToN1_21120 Cystathionine gamma-synthase	K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D      ToN1_19140 putative pyridoxal phosphate-dependent aminotransferase	K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D      ToN1_23030 metH; Methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      ToN1_45060 Putative methyltransferase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      ToN1_00490 sufS1; Cysteine desulfurase	K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D      ToN1_09450 sufS2; Cysteine desulfurase	K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D      ToN1_37120 trxB; Thioredoxin reductase	K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D      ToN1_15620 cysC; Multifunctional fusion protein/Sulfate adenylyltransferase, large subunit	K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D      ToN1_22000 cysN; Sulfate adenylyltransferase, large subunit	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      ToN1_15630 cysD1; Sulfate adenylyltransferase, small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      ToN1_21980 cysD2; Sulfate adenylyltransferase, small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      ToN1_08550 selD; Selenide, water dikinase	K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D      ToN1_10320 metG; Methionine-tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C    00460 Cyanoamino acid metabolism [PATH:apet00460]
D      ToN1_36600 ggt; Gamma-glutamyltranspeptidase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      ToN1_00140 putative L-asparaginase	K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D      ToN1_21910 L-asparaginase II	K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D      ToN1_35420 glyA1; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_42500 glyA2; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_45110 glyA3; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_49950 glyA4; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C    00470 D-Amino acid metabolism [PATH:apet00470]
D      ToN1_28640 alr; Alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      ToN1_24230 Putative D-alanine aminotransferase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      ToN1_17050 ddl; D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      ToN1_12480 ansB; L-asparaginase II	K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D      ToN1_11380 murI; Glutamate racemase	K01776 murI; glutamate racemase [EC:5.1.1.3]
D      ToN1_17090 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      ToN1_42600 dsdA; putative D-serine dehydratase	K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D      ToN1_30480 dapF; Diaminopimelate epimerase	K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D      ToN1_15680 Diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      ToN1_21430 lysA; Diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      ToN1_41370 D-lysine 5,6-aminomutase, alpha subunit	K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D      ToN1_41380 L-beta-lysine 5,6-aminomutase, beta subunit	K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
D      ToN1_28650 dadA; D-amino acid dehydrogenase	K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D      ToN1_33610 putative D-amino acid dehydrogenase	K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C    00480 Glutathione metabolism [PATH:apet00480]
D      ToN1_36600 ggt; Gamma-glutamyltranspeptidase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      ToN1_14680 pxpA; 5-oxoprolinase, subunit A	K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D      ToN1_14690 pxpC; 5-oxoprolinase, subunit C	K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D      ToN1_13370 Putative glutamate--cysteine ligase 2	K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D      ToN1_41020 Glutamate--cysteine ligase	K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D      ToN1_23480 gshA; Glutamate--cysteine ligase	K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D      ToN1_23470 gshB; Glutathione synthetase	K01920 gshB; glutathione synthase [EC:6.3.2.3]
D      ToN1_42040 pepA; putative cytosol aminopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      ToN1_14200 pepN; Aminopeptidase N	K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D      ToN1_46030 Peptidase, M20 family	K01270 pepD; dipeptidase D [EC:3.4.13.-]
D      ToN1_22430 Glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      ToN1_29520 putative glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      ToN1_36240 Glutathione S-transferase family protein	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      ToN1_40960 Glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      ToN1_11080 icd1; Isocitrate dehydrogenase [NADP], dimeric	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      ToN1_11090 icd2; Isocitrate dehydrogenase [NADP], monomeric	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      ToN1_43500 zwf1; Glucose-6-phosphate 1-dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      ToN1_43970 zwf2; Glucose-6-phosphate 1-dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      ToN1_34950 Glutathione peroxidase	K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D      ToN1_40950 Glutathione peroxidase	K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D      ToN1_00520 Polyamine biosynthesis domain-containing protein	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      ToN1_11560 Polyamine aminopropyltransferase	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      ToN1_25390 speE; Polyamine aminopropyltransferase	K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B  09107 Glycan biosynthesis and metabolism
C    00510 N-Glycan biosynthesis
C    00513 Various types of N-glycan biosynthesis
C    00512 Mucin type O-glycan biosynthesis
C    00515 Mannose type O-glycan biosynthesis
C    00514 Other types of O-glycan biosynthesis
C    00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C    00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C    00533 Glycosaminoglycan biosynthesis - keratan sulfate
C    00531 Glycosaminoglycan degradation
C    00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C    00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C    00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C    00604 Glycosphingolipid biosynthesis - ganglio series
C    00511 Other glycan degradation
C    00540 Lipopolysaccharide biosynthesis [PATH:apet00540]
D      ToN1_01170 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D      ToN1_17010 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase	K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D      ToN1_01190 lpxD; UDP-3-O-acylglucosamine N-acyltransferase	K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D      ToN1_37720 lpxH; UDP-2,3-diacylglucosamine hydrolase	K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D      ToN1_01160 lpxB; Lipid-A-disaccharide synthase	K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D      ToN1_36550 lpxK; Tetraacyldisaccharide 4'-kinase	K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D      ToN1_32710 kdsD; Arabinose 5-phosphate isomerase	K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D      ToN1_46500 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase	K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D      ToN1_36570 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase	K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D      ToN1_17560 3-deoxy-D-manno-octulosonic acid transferase	K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D      ToN1_30460 putative lipid A biosynthesis lauroyl acyltransferase	K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D      ToN1_30470 htrB; Lipid A biosynthesis lauroyl acyltransferase	K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D      ToN1_22050 Putative lipid A deacylase	K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D      ToN1_17210 gmhA; Phosphoheptose isomerase	K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D      ToN1_30920 rfaE; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase	K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D      ToN1_32610 gmhB; D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase	K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D      ToN1_16310 Putative cytidyltransferase	K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D      ToN1_30910 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase	K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D      ToN1_30890 waaC; Lipopolysaccharide heptosyltransferase I	K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D      ToN1_30900 waaF; ADP-heptose-LPS heptosyltransferase II	K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D      ToN1_30870 Lipopolysaccharide core heptose(I) kinase	K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D      ToN1_30880 Glucosyltransferase I family protein	K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C    00542 O-Antigen repeat unit biosynthesis
C    00541 O-Antigen nucleotide sugar biosynthesis [PATH:apet00541]
D      ToN1_09560 epsT; UTP--glucose-1-phosphate uridylyltransferase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      ToN1_19380 galE; UDP-glucose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      ToN1_15210 udg1; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      ToN1_34850 udg2; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      ToN1_17550 NAD-dependent epimerase/dehydratase	K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D      ToN1_21470 rmlA; Glucose-1-phosphate thymidylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      ToN1_21480 rmlB; dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D      ToN1_21460 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase	K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D      ToN1_17480 dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D      ToN1_21450 rmlD; dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D      ToN1_18150 ascD; CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase	K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D      ToN1_17530 Mannose-1-phosphate guanylyltransferase	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      ToN1_37290 xanB; Xanthan biosynthesis protein	K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D      ToN1_17490 gmd1; GDP-mannose 4,6-dehydratase	K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D      ToN1_17510 gmd2; GDP-mannose 4,6-dehydratase	K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D      ToN1_17520 fcl; GDP-L-fucose synthase	K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D      ToN1_28600 Aminotransferase family protein	K13010 per; perosamine synthetase [EC:2.6.1.102]
D      ToN1_21270 glmU; Bifunctional protein	K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D      ToN1_16000 UDP-N-acetylglucosamine 2-epimerase	K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D      ToN1_17470 capD; UDP-glucose 4-epimerase	K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D      ToN1_17460 wecB; UDP-N-acetylglucosamine 2-epimerase	K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D      ToN1_12080 UDP-glucose/GDP-mannose dehydrogenase	K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C    00550 Peptidoglycan biosynthesis [PATH:apet00550]
D      ToN1_32820 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      ToN1_22860 murB; UDP-N-acetylenolpyruvoylglucosamine reductase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      ToN1_17060 murC; UDP-N-acetylmuramate--L-alanine ligase	K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D      ToN1_17090 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      ToN1_17120 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      ToN1_17050 ddl; D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      ToN1_17110 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D      ToN1_01250 uppS; Isoprenyl transferase	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D      ToN1_17810 uppP; Undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      ToN1_17100 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      ToN1_17070 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D      ToN1_17880 mtgA; Biosynthetic peptidoglycan transglycosylase	K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D      ToN1_21410 mrcA; Penicillin-binding protein 1A	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      ToN1_24650 pbpC; Penicillin-binding protein 1C	K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D      ToN1_24270 mrdA; cell elongation-specific peptidoglycan D,D-transpeptidase/peptidoglycan glycosyltransferase	K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D      ToN1_17130 ftsI; Peptidoglycan D,D-transpeptidase	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      ToN1_24240 dacC; D-alanyl-D-alanine carboxypeptidase	K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D      ToN1_21490 D-alanyl-D-alanine carboxypeptidase	K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C    00552 Teichoic acid biosynthesis [PATH:apet00552]
D      ToN1_17810 uppP; Undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C    00571 Lipoarabinomannan (LAM) biosynthesis
C    00572 Arabinogalactan biosynthesis - Mycobacterium
C    00543 Exopolysaccharide biosynthesis [PATH:apet00543]
D      ToN1_17420 Putative glycosyl transferase, family 1	K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D      ToN1_15850 Membrane bound O-acyl transferase	K19294 algI; alginate O-acetyltransferase complex protein AlgI
D      ToN1_34810 Membrane bound O-acyl transferase family protein	K19294 algI; alginate O-acetyltransferase complex protein AlgI
D      ToN1_09750 cysE; Serine O-acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      ToN1_34760 putative serine O-acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      ToN1_34820 Uncharacterized protein	K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
D      ToN1_34840 Putative pyruvyl transferase	K13665 gumL; pyruvyltransferase
B
B  09108 Metabolism of cofactors and vitamins
C    00730 Thiamine metabolism [PATH:apet00730]
D      ToN1_17770 thiC; Phosphomethylpyrimidine synthase	K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D      ToN1_17760 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D      ToN1_17930 Putative phosphomethylpyrimidine kinase	K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D      ToN1_09720 iscS; Cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      ToN1_09730 Putative cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      ToN1_11520 dxs; 1-deoxy-D-xylulose-5-phosphate synthase	K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D      ToN1_13610 thiG1; Thiazole synthase	K03149 thiG; thiazole synthase [EC:2.8.1.10]
D      ToN1_23620 thiG2; Thiazole synthase	K03149 thiG; thiazole synthase [EC:2.8.1.10]
D      ToN1_17920 thiE; Thiamine-phosphate synthase	K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D      ToN1_22290 thiL; Thiamine-monophosphate kinase	K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D      ToN1_38680 rsgA; Small ribosomal subunit biogenesis GTPase	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D      ToN1_36580 adk; Adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
C    00740 Riboflavin metabolism [PATH:apet00740]
D      ToN1_06650 ribA; GTP cyclohydrolase II	K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D      ToN1_29190 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase	K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D      ToN1_35400 ribD; Riboflavin biosynthesis protein	K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D      ToN1_42840 HAD hydrolase family protein	K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D      ToN1_29180 ribH; 6,7-dimethyl-8-ribityllumazine synthase	K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D      ToN1_29200 ribE; Riboflavin synthase, alpha subunit	K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D      ToN1_11420 Riboflavin biosynthesis protein	K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D      ToN1_35000 bluB; 5,6-Dimethylbenzimidazole synthase	K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D      ToN1_38190 putative NUDIX family hydrolase	K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D      ToN1_23740 ubiX2; Flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      ToN1_08930 ubiX1; Flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C    00750 Vitamin B6 metabolism [PATH:apet00750]
D      ToN1_32130 Putative D-erythrose-4-phosphate dehydrogenase	K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D      ToN1_15290 serC; Phosphoserine aminotransferase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      ToN1_34600 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase	K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D      ToN1_09850 pdxJ; Pyridoxine 5'-phosphate synthase	K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D      ToN1_38980 thrC; Threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
C    00760 Nicotinate and nicotinamide metabolism [PATH:apet00760]
D      ToN1_09980 nadB; L-aspartate oxidase	K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D      ToN1_02130 nadX; L-aspartate dehydrogenase	K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D      ToN1_31650 nadA; Quinolinate synthase A	K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D      ToN1_38990 nadC; Nicotinate-nucleotide pyrophosphorylase (carboxylating)	K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D      ToN1_09510 pncB; Nicotinate phosphoribosyltransferase	K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D      ToN1_15000 surE; 5'-nucleotidase	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      ToN1_30640 nadD; Nicotinate-nucleotide adenylyltransferase	K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D      ToN1_09000 nudC; NADH pyrophosphatase	K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D      ToN1_37090 nadE; Glutamine-dependent NAD(+) synthetase	K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D      ToN1_22310 CinA-related protein	K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D      ToN1_09500 pncA; Nicotinamidase	K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D      ToN1_22590 npd; NAD-dependent deacetylase II	K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D      ToN1_37860 nadK; NAD kinase	K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D      ToN1_11660 pntAB; NAD(P) transhydrogenase, alpha subunit part 2	K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D      ToN1_11670 pntAA; NAD(P) transhydrogenase, alpha subunit part 1	K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D      ToN1_11650 pntB; NAD(P) transhydrogenase, beta subunit	K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D      ToN1_50040 Isochorismatase family protein	K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D      ToN1_50090 Isochorismatase family protein	K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D      ToN1_21050 Putative Asp/Glu racemase	K01799 nicE; maleate isomerase [EC:5.2.1.1]
D      ToN1_43270 Racemase family protein	K01799 nicE; maleate isomerase [EC:5.2.1.1]
D      ToN1_08650 gabD; Succinate-semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C    00770 Pantothenate and CoA biosynthesis [PATH:apet00770]
D      ToN1_02140 Putative acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_14250 ilvI; Acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_37480 ilvB; Acetolactate synthase isozyme 1, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      ToN1_14260 ilvH; Acetolactate synthase, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      ToN1_37490 ilvN; Acetolactate synthase isozyme 1, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      ToN1_14270 ilvC; Ketol-acid reductoisomerase (NADP(+))	K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D      ToN1_18450 ilvD; Dihydroxy-acid dehydratase	K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D      ToN1_14170 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase	K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D      ToN1_46700 apbA; 2-dehydropantoate 2-reductase	K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D      ToN1_14180 panC; Pantothenate synthetase	K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D      ToN1_31560 Type III pantothenate kinase	K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D      ToN1_11170 Coenzyme A biosynthesis bifunctional protein	K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D      ToN1_31890 coaD; Phosphopantetheine adenylyltransferase	K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D      ToN1_31530 coaE; Dephospho-CoA kinase	K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D      ToN1_09840 acpS; Holo-[acyl-carrier-protein] synthase	K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D      ToN1_31060 Acyl carrier protein phosphodiesterase	K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D      ToN1_35620 ilvE; Branched-chain-amino-acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      ToN1_43330 hydA; D-hydantoinase	K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D      ToN1_04730 panD; Aspartate 1-decarboxylase	K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00780 Biotin metabolism [PATH:apet00780]
D      ToN1_01110 bioC1; Malonyl-[acyl-carrier protein] O-methyltransferase	K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D      ToN1_35250 bioC2; Malonyl-[acyl-carrier protein] O-methyltransferase	K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D      ToN1_47170 putative 3-oxoacyl-[acyl carrier protein] synthase	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      ToN1_10000 fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      ToN1_47980 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      ToN1_49990 fabF2; 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      ToN1_05910 NAD(P)-binding domain superfamily protein	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_06080 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_06530 Putative 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_10020 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_47140 Short-chain dehydrogenase/reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_48970 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_01180 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      ToN1_47220 FabA-like domain-containing protein	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      ToN1_47770 fabI1; Enoyl-[acyl-carrier-protein] reductase (NADH)	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      ToN1_49560 fabI2; Enoyl-[acyl-carrier-protein] reductase (NADH)	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      ToN1_01100 bioH; Pimeloyl-[acyl-carrier protein] methyl ester esterase	K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D      ToN1_01090 bioF; 8-amino-7-oxononanoate synthase	K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D      ToN1_01080 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D      ToN1_01120 bioD; ATP-dependent dethiobiotin synthetase	K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D      ToN1_35260 bioB; Biotin synthase	K01012 bioB; biotin synthase [EC:2.8.1.6]
D      ToN1_31570 Biotin-acetyl-CoA-carboxylase ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C    00785 Lipoic acid metabolism [PATH:apet00785]
D      ToN1_24210 lipB; Octanoyltransferase	K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D      ToN1_24200 lipA1; Lipoyl synthase	K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D      ToN1_42540 lipA2; Lipoyl synthase	K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D      ToN1_43690 BPL and LPL domain-containing protein	K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_21140 aceE1; Pyruvate dehydrogenase E1 component	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      ToN1_40220 aceE2; Pyruvate dehydrogenase E1 component	K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D      ToN1_40730 pdhA1; Pyruvate dehydrogenase E1 component, alpha subunit	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      ToN1_40740 pdhB1; Pyruvate dehydrogenase E1 component, beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      ToN1_21150 aceF1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_32440 Putative dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_40210 aceF2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_40750 pdhC1; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      ToN1_47640 sucA; 2-oxoglutarate dehydrogenase E1 component	K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D      ToN1_47650 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D      ToN1_46970 pdhA2; Pyruvate dehydrogenase E1 component, alpha subunit	K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D      ToN1_46960 pdhB2; Pyruvate dehydrogenase E1 component, beta subunit	K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D      ToN1_46950 pdhC2; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex	K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D      ToN1_08340 gcvP1; Glycine dehydrogenase (decarboxylating)	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      ToN1_42470 gcvP2; Glycine dehydrogenase (decarboxylating)	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      ToN1_42530 gcvT; Glycine cleavage T-protein	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      ToN1_08330 gcvH1; Glycine cleavage system H protein	K02437 gcvH; glycine cleavage system H protein
D      ToN1_42460 gcvH2; Glycine cleavage system H protein	K02437 gcvH; glycine cleavage system H protein
C    00790 Folate biosynthesis [PATH:apet00790]
D      ToN1_06420 folE1; GTP cyclohydrolase I	K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D      ToN1_49580 folE4; GTP cyclohydrolase I	K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D      ToN1_11530 folE2; GTP cyclohydrolase	K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D      ToN1_45080 folE3; GTP cyclohydrolase	K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D      ToN1_42610 Alkaline phosphatase	K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D      ToN1_15580 dATP pyrophosphohydrolase	K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D      ToN1_10600 folB1; Dihydroneopterin aldolase	K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D      ToN1_42550 Dihydroneopterin aldolase	K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D      ToN1_45170 folB2; Dihydroneopterin aldolase	K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D      ToN1_49890 Dihydroneopterin aldolase	K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D      ToN1_14140 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D      ToN1_37970 folP; Dihydropteroate synthase	K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D      ToN1_10270 dfrA; Dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      ToN1_37670 folC1; Dihydrofolate synthase/folylpolyglutamate synthase	K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D      ToN1_44950 folC2; Dihydrofolate synthase/folylpolyglutamate synthase	K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D      ToN1_06650 ribA; GTP cyclohydrolase II	K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D      ToN1_29190 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase	K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D      ToN1_42560 putative aminodeoxychorismate synthase, component I	K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D      ToN1_00720 Putative aminodeoxychorismate synthase component I	K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D      ToN1_49880 Para-aminobenzoate synthase, component I	K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D      ToN1_14560 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase	K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D      ToN1_00750 Putative pterin-4-alpha-carbinolamine dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      ToN1_13750 Uncharacterized protein	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      ToN1_22490 Putative pteridine reductase	K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D      ToN1_22160 queE; 7-carboxy-7-deazaguanine synthase	K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D      ToN1_22170 queC; 7-cyano-7-deazaguanine synthase	K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D      ToN1_18260 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase	K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D      ToN1_10190 moaA; GTP 3',8-cyclase	K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D      ToN1_41970 moaC; Cyclic pyranopterin monophosphate synthase	K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D      ToN1_47730 moaE; Molybdopterin synthase, catalytic subunit	K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D      ToN1_35500 mog; Molybdopterin adenylyltransferase	K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D      ToN1_35190 Molybdopterin molybdenumtransferase	K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D      ToN1_47710 moeA; Molybdopterin molybdenumtransferase	K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D      ToN1_00220 MoaB/Mog domain-containing protein	K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D      ToN1_46850 NTP transferase domain-containing protein	K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D      ToN1_24780 mobA; Molybdenum cofactor guanylyltransferase	K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C    00670 One carbon pool by folate [PATH:apet00670]
D      ToN1_10270 dfrA; Dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      ToN1_40300 folD1; Bifunctional protein	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      ToN1_44960 folD2; Bifunctional protein	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      ToN1_42880 Uncharacterized protein	K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D      ToN1_35420 glyA1; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_42500 glyA2; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_45110 glyA3; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_49950 glyA4; Serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      ToN1_14610 purN; Phosphoribosylglycinamide formyltransferase	K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D      ToN1_34500 purH; Bifunctional purine biosynthesis protein	K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D      ToN1_15900 putative formyl transferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      ToN1_24840 fmt; Methionyl-tRNA formyltransferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      ToN1_42530 gcvT; Glycine cleavage T-protein	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      ToN1_23030 metH; Methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      ToN1_45060 Putative methyltransferase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      ToN1_10260 thyA; Thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D      ToN1_23380 purU1; Formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      ToN1_44970 purU2; Formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      ToN1_50250 purU3; Formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      ToN1_30350 metF; 5,10-methylenetetrahydrofolate reductase	K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D      ToN1_45020 Putative methylenetetrahydrofolate reductase	K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D      ToN1_22400 putative 5-formyltetrahydrofolate cyclo-ligase	K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C    00830 Retinol metabolism
C    00860 Porphyrin metabolism [PATH:apet00860]
D      ToN1_49140 gltX; Glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      ToN1_34320 hemA; Glutamyl-tRNA reductase	K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D      ToN1_17910 hemL; Glutamate-1-semialdehyde 2,1-aminomutase	K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D      ToN1_35230 hemB; Delta-aminolevulinic acid dehydratase	K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D      ToN1_34440 hemC; Porphobilinogen deaminase	K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D      ToN1_34450 hemD; Uroporphyrinogen-III synthase	K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D      ToN1_25680 hemE; Uroporphyrinogen decarboxylase	K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D      ToN1_34480 hemF; Oxygen-dependent coproporphyrinogen-III oxidase	K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D      ToN1_37010 hemN; Oxygen-independent coproporphyrinogen-III oxidase	K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D      ToN1_07060 NADH:flavin oxidoreductase	K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D      ToN1_18130 Uncharacterized protein	K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D      ToN1_37840 hemH; Ferrochelatase	K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D      ToN1_34460 hemX; Uroporphyrinogen-III C-methyltransferase	K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D      ToN1_15160 Uroporphyrinogen-III methylase	K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D      ToN1_31020 cobA; Uroporphyrinogen-III C-methyltransferase	K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D      ToN1_33380 putative uroporphyrin-III C-methyltransferase	K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D      ToN1_15110 nirH; Heme d1 biosynthesis protein	K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D      ToN1_15120 nirG; Transcriptional regulator, AsnC family	K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D      ToN1_15130 nirD2; Nitrite reductase (NADH) small subunit	K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D      ToN1_15090 nirN; Nitrite reductase like c-type cytochrome	K24867 nirN; dihydro-heme d1 dehydrogenase
D      ToN1_16110 ctaB; Protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      ToN1_16120 putative cytochrome oxidase assembly protein, CtaA family	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      ToN1_19090 Sirohydrochlorin cobaltochelatase	K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D      ToN1_20650 cbiX; putative sirohydrochlorin cobaltochelatase	K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D      ToN1_20690 cobI; Precorrin-2 C(20)-methyltransferase	K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D      ToN1_20740 Precorrin-3B C(17)-methyltransferase	K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D      ToN1_20640 cobM; Precorrin-4 C(11)-methyltransferase	K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D      ToN1_20700 cbiG; Cobalt-precorrin-5A hydrolase	K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D      ToN1_20710 Cobalt-precorrin-5A hydrolase	K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D      ToN1_20670 cbiD; Precorrin-5B C(1)-methyltransferase	K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D      ToN1_20680 cobL; Precorrin-6Y C(5,15)-methyltransferase	K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D      ToN1_20660 cbiC; Precorrin-8X methylmutase	K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D      ToN1_31030 cobB; Cobyrinic acid a,c-diamide synthase	K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D      ToN1_13670 Cobalamin biosynthesis protein	K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D      ToN1_13680 Cobalt chelatase	K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D      ToN1_35560 ATP:cob(I)alamin adenosyltransferase	K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      ToN1_31010 cobO; Corrinoid adenosyltransferase	K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      ToN1_20560 cobQ; Cobyric acid synthase	K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D      ToN1_20570 cobD; Cobalamin biosynthesis protein	K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D      ToN1_38660 Cobalamin biosynthesis protein	K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D      ToN1_20580 Threonine-phosphate decarboxylase	K02225 cobC1; cobalamin biosynthesis protein CobC
D      ToN1_49860 Threonine-phosphate decarboxylase	K02225 cobC1; cobalamin biosynthesis protein CobC
D      ToN1_30970 cobU; Bifunctional adenosylcobalamin biosynthesis protein	K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D      ToN1_30940 cobS; Adenosylcobinamide-GDP ribazoletransferase	K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D      ToN1_30950 cobT; Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase	K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D      ToN1_30930 cobC; Alpha-ribazole phosphatase	K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D      ToN1_28550 Cobalamin-binding domain-containing protein	K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D      ToN1_20840 hypothetical protein	K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D      ToN1_18550 bfr; Bacterioferritin	K03594 bfr; bacterioferritin [EC:1.16.3.1]
C    00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:apet00130]
D      ToN1_26790 Thioesterase	K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D      ToN1_50290 Thioesterase domain-containing protein	K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D      ToN1_21550 ubiC; Chorismate pyruvate-lyase	K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D      ToN1_47100 Uncharacterized protein	K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D      ToN1_21540 ubiA; 4-hydroxybenzoate octaprenyltransferase	K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D      ToN1_21510 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase	K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D      ToN1_23740 ubiX2; Flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      ToN1_08930 ubiX1; Flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      ToN1_31450 Ubiquinone biosynthesis hydroxylase family protein	K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D      ToN1_15330 ubiG; Ubiquinone biosynthesis O-methyltransferase	K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D      ToN1_34540 Putative 2-octaprenyl-6-methoxyphenol hydroxylase	K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D      ToN1_24400 ubiE; Ubiquinone/menaquinone biosynthesis C-methyltransferase	K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D      ToN1_35900 coq7; 3-demethoxyubiquinol 3-hydroxylase	K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D      ToN1_30560 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase	K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D      ToN1_14440 putative NAD(P)H dehydrogenase (quinone)	K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D      ToN1_41870 NAD(P)-binding domain-containing protein	K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B  09109 Metabolism of terpenoids and polyketides
C    00900 Terpenoid backbone biosynthesis [PATH:apet00900]
D      ToN1_11520 dxs; 1-deoxy-D-xylulose-5-phosphate synthase	K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D      ToN1_01230 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase	K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D      ToN1_45610 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D      ToN1_31830 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D      ToN1_45620 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D      ToN1_33180 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D      ToN1_11460 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase	K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_23740 ubiX2; Flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      ToN1_08930 ubiX1; Flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      ToN1_11510 putative farnesyl diphosphate synthase	K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D      ToN1_11570 ispB; Octaprenyl-diphosphate synthase	K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D      ToN1_01250 uppS; Isoprenyl transferase	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D      ToN1_38690 M48 family peptidase	K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C    00902 Monoterpenoid biosynthesis
C    00909 Sesquiterpenoid and triterpenoid biosynthesis
C    00904 Diterpenoid biosynthesis
C    00906 Carotenoid biosynthesis [PATH:apet00906]
D      ToN1_08510 hpnD; Squalene synthase	K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C    00905 Brassinosteroid biosynthesis
C    00981 Insect hormone biosynthesis
C    00908 Zeatin biosynthesis
C    00903 Limonene degradation
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00907 Pinene, camphor and geraniol degradation [PATH:apet00907]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_06950 badK1; putative 4-isopropyl-1-cyclohexene-1-carboxyl-CoA hydratase, BadK-like	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_21760 fadB; Alpha-subunit of fatty acid oxidation complex	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_06880 Short-chain dehydrogenase family protein	K13774 atuB; citronellol/citronellal dehydrogenase
D      ToN1_29920 Hydroxymethylglutaryl-CoA lyase	K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D      ToN1_02610 3-ketoacyl-CoA thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_03670 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_06090 Acetyl-CoA acyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_21710 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_50340 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    01052 Type I polyketide structures
C    00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C    01051 Biosynthesis of ansamycins
D      ToN1_02850 tktA; Transketolase I	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_32040 Putative transketolase, subunit B	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_32050 Putative transketolase, subunit A	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      ToN1_35070 tkt; Transketolase I	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C    01059 Biosynthesis of enediyne antibiotics
C    01056 Biosynthesis of type II polyketide backbone
C    01057 Biosynthesis of type II polyketide products
C    00253 Tetracycline biosynthesis
C    00523 Polyketide sugar unit biosynthesis [PATH:apet00523]
D      ToN1_21470 rmlA; Glucose-1-phosphate thymidylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      ToN1_21480 rmlB; dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D      ToN1_21460 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase	K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D      ToN1_17480 dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D      ToN1_21450 rmlD; dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C    01054 Nonribosomal peptide structures
C    01053 Biosynthesis of siderophore group nonribosomal peptides
C    01055 Biosynthesis of vancomycin group antibiotics
D      ToN1_21480 rmlB; dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B  09110 Biosynthesis of other secondary metabolites
C    00940 Phenylpropanoid biosynthesis
C    00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C    00941 Flavonoid biosynthesis
C    00944 Flavone and flavonol biosynthesis
C    00942 Anthocyanin biosynthesis
C    00943 Isoflavonoid biosynthesis
C    00946 Degradation of flavonoids
C    00901 Indole alkaloid biosynthesis
C    00403 Indole diterpene alkaloid biosynthesis
C    00950 Isoquinoline alkaloid biosynthesis
C    00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C    00996 Biosynthesis of various alkaloids
C    00232 Caffeine metabolism
C    00965 Betalain biosynthesis
C    00966 Glucosinolate biosynthesis
C    00402 Benzoxazinoid biosynthesis
C    00311 Penicillin and cephalosporin biosynthesis
C    00332 Carbapenem biosynthesis [PATH:apet00332]
D      ToN1_11780 proB; Glutamate 5-kinase	K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D      ToN1_10530 proA; Gamma-glutamyl phosphate reductase	K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C    00261 Monobactam biosynthesis [PATH:apet00261]
D      ToN1_15620 cysC; Multifunctional fusion protein/Sulfate adenylyltransferase, large subunit	K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D      ToN1_22000 cysN; Sulfate adenylyltransferase, large subunit	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      ToN1_15630 cysD1; Sulfate adenylyltransferase, small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      ToN1_21980 cysD2; Sulfate adenylyltransferase, small subunit	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      ToN1_14520 lysC; Aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      ToN1_37570 asd; Aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      ToN1_14910 dapA; 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      ToN1_44720 Putative 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      ToN1_37900 dapB; 4-hydroxy-tetrahydrodipicolinate reductase	K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C    00331 Clavulanic acid biosynthesis
C    00521 Streptomycin biosynthesis [PATH:apet00521]
D      ToN1_43960 glk1; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_43980 glk2; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_35590 pgm; Phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      ToN1_09770 suhB; Inositol-1-monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      ToN1_35100 Inositol-1-monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      ToN1_21470 rmlA; Glucose-1-phosphate thymidylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      ToN1_21480 rmlB; dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D      ToN1_21460 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase	K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D      ToN1_17480 dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D      ToN1_21450 rmlD; dTDP-4-dehydrorhamnose reductase	K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C    00524 Neomycin, kanamycin and gentamicin biosynthesis
D      ToN1_43960 glk1; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
D      ToN1_43980 glk2; Glucokinase	K00845 glk; glucokinase [EC:2.7.1.2]
C    00525 Acarbose and validamycin biosynthesis [PATH:apet00525]
D      ToN1_21470 rmlA; Glucose-1-phosphate thymidylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      ToN1_21480 rmlB; dTDP-glucose 4,6-dehydratase	K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C    00401 Novobiocin biosynthesis [PATH:apet00401]
D      ToN1_15270 tyrA; Prephenate dehydrogenase	K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D      ToN1_23290 hisC1; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_32860 hisC2; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_10160 aspC; Aspartate aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_33760 pat; Aromatic-amino-acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C    00404 Staurosporine biosynthesis
C    00405 Phenazine biosynthesis
D      ToN1_16510 trpE; Anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      ToN1_16500 trpG; Anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C    00333 Prodigiosin biosynthesis
D      ToN1_10030 fabD1; Malonyl-CoA-acyl carrier protein transacylase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      ToN1_05910 NAD(P)-binding domain superfamily protein	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_06080 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_06530 Putative 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_10020 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_47140 Short-chain dehydrogenase/reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_48970 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_47770 fabI1; Enoyl-[acyl-carrier-protein] reductase (NADH)	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      ToN1_49560 fabI2; Enoyl-[acyl-carrier-protein] reductase (NADH)	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C    00254 Aflatoxin biosynthesis
C    00998 Biosynthesis of various antibiotics
D      ToN1_15660 Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_10010 acpP; Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_40760 putative acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_47250 Acyl carrier protein	K02078 acpP; acyl carrier protein
D      ToN1_47970 Acyl carrier protein	K02078 acpP; acyl carrier protein
C    00999 Biosynthesis of various plant secondary metabolites [PATH:apet00999]
D      ToN1_30440 metK; S-adenosylmethionine synthase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      ToN1_17870 aroE; Shikimate dehydrogenase (NADP(+))	K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C    00997 Biosynthesis of various other secondary metabolites
B
B  09111 Xenobiotics biodegradation and metabolism
C    00362 Benzoate degradation [PATH:apet00362]
D      ToN1_02610 3-ketoacyl-CoA thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_03670 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_06090 Acetyl-CoA acyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_21710 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_50340 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_26640 pcaF; Beta-ketoadipyl-CoA thiolase	K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D      ToN1_02380 paaJ1; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase	K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D      ToN1_46680 4-oxalocrotonate tautomerase	K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D      ToN1_33040 Dioxygenase family protein	K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D      ToN1_04150 putative dicarboxylate lyase	K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D      ToN1_04080 PrpF family protein	K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D      ToN1_04220 PrpF family protein	K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D      ToN1_06160 FAD/NAD(P)-dependent oxidoreductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D      ToN1_32260 Putative ferredoxin reductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D      ToN1_06170 [2Fe-2S] ferredoxin	K04755 fdx; ferredoxin, 2Fe-2S
D      ToN1_09670 fdx2; [2Fe-2S] ferredoxin	K04755 fdx; ferredoxin, 2Fe-2S
D      ToN1_32470 fdx4; [2Fe-2S] ferredoxin	K04755 fdx; ferredoxin, 2Fe-2S
D      ToN1_26910 hbcL; 3-hydroxybenzoate-CoA-ligase	K20458 hcl; 3-hydroxybenzoate/4-hydroxybenzoate---CoA ligase [EC:6.2.1.37 6.2.1.27]
D      ToN1_26790 Thioesterase	K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D      ToN1_50290 Thioesterase domain-containing protein	K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D      ToN1_29650 hcrC; 4-hydroxybenzoyl-CoA reductase, gamma subunit	K04107 hcrC; 4-hydroxybenzoyl-CoA reductase subunit gamma [EC:1.1.7.1]
D      ToN1_29640 hcrA; 4-hydroxybenzoyl-CoA reductase, alpha subunit	K04108 hcrA; 4-hydroxybenzoyl-CoA reductase subunit alpha [EC:1.1.7.1]
D      ToN1_29630 hcrB; 4-hydroxybenzoyl-CoA reductase, beta subunit	K04109 hcrB; 4-hydroxybenzoyl-CoA reductase subunit beta [EC:1.1.7.1]
D      ToN1_26720 bclA1; Benzoate-CoA ligase	K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D      ToN1_39210 hcl2; 4-hydroxybenzoate-CoA ligase	K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D      ToN1_48960 bclA2; Benzoate-CoA ligase	K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D      ToN1_26840 bcrC1; Benzoyl-CoA reductase, gamma subunit	K04112 bcrC; benzoyl-CoA reductase subunit C [EC:1.3.7.8]
D      ToN1_49100 bcrC2; Benzoyl-CoA reductase, gamma subunit	K04112 bcrC; benzoyl-CoA reductase subunit C [EC:1.3.7.8]
D      ToN1_26850 bcrB1; Benzoyl-CoA reductase, beta subunit	K04113 bcrB; benzoyl-CoA reductase subunit B [EC:1.3.7.8]
D      ToN1_49090 bcrB2; Benzoyl-CoA reductase, beta subunit	K04113 bcrB; benzoyl-CoA reductase subunit B [EC:1.3.7.8]
D      ToN1_49070 bcrA; Benzoyl-CoA reductase, alpha subunit	K04114 bcrA; benzoyl-CoA reductase subunit A [EC:1.3.7.8]
D      ToN1_49080 bcrD; Benzoyl-CoA reductase, delta subunit	K04115 bcrD; benzoyl-CoA reductase subunit D [EC:1.3.7.8]
D      ToN1_49000 dch; Cyclohexa-1,5-dienecarbonyl-CoA hydratase	K07537 dch; cyclohexa-1,5-dienecarbonyl-CoA hydratase [EC:4.2.1.100]
D      ToN1_48990 had; 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase	K07538 had; 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase [EC:1.1.1.368]
D      ToN1_48980 oah; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase	K07539 oah; 6-oxocyclohex-1-ene-carbonyl-CoA hydrolase [EC:3.7.1.21]
D      ToN1_46730 aliA; Cyclohexanecarboxylate-CoA ligase	K04116 aliA; cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
D      ToN1_06890 Acyl-CoA dehydrogenase	K04117 aliB; cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-]
D      ToN1_46740 aliB; Cyclohexanecarboxyl-CoA dehydrogenase	K04117 aliB; cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-]
D      ToN1_05590 Short-chain dehydrogenase/reductase SDR family protein	K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D      ToN1_06970 badH1; 2-hydroxy-4-isopropylcyclohexane-1-carboxyl-CoA dehydrogenase	K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D      ToN1_26920 Short-chain dehydrogenase/reductase SDR family protein	K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D      ToN1_32210 Short-chain dehydrogenase/reductase	K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D      ToN1_46760 badH2; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase	K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D      ToN1_06960 badI1; 2-oxo-4-isopropylcyclohexane-1-carboxyl-CoA hydrolase	K07536 badI; 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-]
D      ToN1_46770 badI2; 2-ketocyclohexanecarboxyl-CoA hydrolase	K07536 badI; 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-]
D      ToN1_06950 badK1; putative 4-isopropyl-1-cyclohexene-1-carboxyl-CoA hydratase, BadK-like	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_21760 fadB; Alpha-subunit of fatty acid oxidation complex	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_02320 Putative 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      ToN1_02620 3-hydroxyacyl-CoA dehydrogenase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      ToN1_21720 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase	K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D      ToN1_25120 Glutaryl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_05770 Enoyl-CoA hydratase/isomerase	K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_06100 3-hydroxyacyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_28820 paaH1; 3-hydroxyadipyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_32150 hbd1; 3-hydroxybutanoyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_37410 hbd2; 3-hydroxybutanoyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_46830 paaH2; 3-hydroxyadipyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_26650 boxA; Benzoyl-CoA oxygenase component A	K15511 boxA; benzoyl-CoA 2,3-epoxidase subunit A [EC:1.14.13.208]
D      ToN1_26660 boxB; Benzoyl-CoA oxygenase component B	K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208]
D      ToN1_26690 boxD; 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase	K15514 boxD; 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase [EC:1.2.1.77]
D      ToN1_26670 boxC; Benzoyl-CoA-dihydrodiol lyase	K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44]
C    00627 Aminobenzoate degradation [PATH:apet00627]
D      ToN1_50590 Amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      ToN1_10340 acyP; Acylphosphatase	K01512 acyP; acylphosphatase [EC:3.6.1.7]
D      ToN1_26720 bclA1; Benzoate-CoA ligase	K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D      ToN1_39210 hcl2; 4-hydroxybenzoate-CoA ligase	K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D      ToN1_48960 bclA2; Benzoate-CoA ligase	K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D      ToN1_43340 Alpha-hydroxy acid dehydrogenase family protein, FMN-dependent	K15054 mdlB; (S)-mandelate dehydrogenase [EC:1.1.99.31]
D      ToN1_26910 hbcL; 3-hydroxybenzoate-CoA-ligase	K20458 hcl; 3-hydroxybenzoate/4-hydroxybenzoate---CoA ligase [EC:6.2.1.37 6.2.1.27]
D      ToN1_29650 hcrC; 4-hydroxybenzoyl-CoA reductase, gamma subunit	K04107 hcrC; 4-hydroxybenzoyl-CoA reductase subunit gamma [EC:1.1.7.1]
D      ToN1_29640 hcrA; 4-hydroxybenzoyl-CoA reductase, alpha subunit	K04108 hcrA; 4-hydroxybenzoyl-CoA reductase subunit alpha [EC:1.1.7.1]
D      ToN1_29630 hcrB; 4-hydroxybenzoyl-CoA reductase, beta subunit	K04109 hcrB; 4-hydroxybenzoyl-CoA reductase subunit beta [EC:1.1.7.1]
D      ToN1_23740 ubiX2; Flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      ToN1_08930 ubiX1; Flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      ToN1_08900 ppcA; Phenylphosphate carboxylase, alpha subunit	K25932 ppcA; phenyl-phosphate phosphatase/carboxylase subunit alpha [EC:4.1.1.123]
D      ToN1_08880 ppcB; Phenylphosphate carboxylase, beta subunit	K25933 ppcB; phenyl-phosphate phosphatase/carboxylase subunit beta [EC:4.1.1.123]
D      ToN1_08910 ppcC; Phenylphosphate carboxylase, gamma subunit	K25934 ppcC; phenyl-phosphate phosphatase/carboxylase subunit gamma [EC:4.1.1.123]
D      ToN1_08890 ppcD; Phenylphosphate carboxylase, delta subunit	K25935 ppcD; phenyl-phosphate phosphatase/carboxylase subunit delta [EC:4.1.1.123]
D      ToN1_08850 ppsA; Phenylphosphate synthase, alpha subunit	K25936 ppsA; phenol phosphorylase subunit alpha [EC:2.7.1.238]
D      ToN1_08860 ppsB; Phenylphosphate synthase, beta subunit	K25937 ppsB; phenol phosphorylase subunit beta [EC:2.7.1.238]
D      ToN1_08870 ppsC; PpaC	K25938 ppsC; phenol phosphorylase subunit delta gamma [EC:2.7.1.238]
D      ToN1_50470 Putative acetyl-CoA synthetase	K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D      ToN1_50530 Oxidoreductase, NAD(P)-binding domain-containing protein	K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D      ToN1_03800 Rieske [2FE-2S] iron-sulfur domain-containing protein	K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component
D      ToN1_39380 hbd; p-hydroxybenzaldehyde dehydrogenase	K21802 vdh; vanillin dehydrogenase [EC:1.2.1.67]
D      ToN1_03700 atoD; Acetate CoA-transferase, alpha subunit	K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D      ToN1_03690 atoA; Acetate CoA-transferase, beta subunit	K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C    00364 Fluorobenzoate degradation
C    00625 Chloroalkane and chloroalkene degradation [PATH:apet00625]
D      ToN1_40590 S-(hydroxymethyl)glutathione dehydrogenase / class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      ToN1_07310 iad; 4-isopropylbenzaldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_12400 aldA3; Aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      ToN1_41090 Alcohol dehydrogenase, PQQ-dependent	K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D      ToN1_41650 PQQ-dependent dehydrogenase, methanol/ethanol family	K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D      ToN1_25970 Alpha/beta hydrolase fold family-protein	K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D      ToN1_10940 2-haloacid dehalogenase family protein	K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C    00361 Chlorocyclohexane and chlorobenzene degradation [PATH:apet00361]
D      ToN1_02080 Oxidoreductase FAD/NAD(P)-binding domain-containing protein	K21607 pcpD; tetrachlorobenzoquinone reductase [EC:1.1.1.404]
D      ToN1_10940 2-haloacid dehalogenase family protein	K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D      ToN1_25970 Alpha/beta hydrolase fold family-protein	K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C    00623 Toluene degradation [PATH:apet00623]
D      ToN1_01380 bssC; Benzylsuccinate synthase, gamma subunit	K07540 E4.1.99.11; benzylsuccinate synthase [EC:4.1.99.11]
D      ToN1_01390 bssA; Benzylsuccinate synthase, alpha subunit	K07540 E4.1.99.11; benzylsuccinate synthase [EC:4.1.99.11]
D      ToN1_01400 bssB; Benzylsuccinate synthase, beta subunit	K07540 E4.1.99.11; benzylsuccinate synthase [EC:4.1.99.11]
D      ToN1_01570 bbsE; Succinyl-CoA:(R)-benzylsuccinate-CoA-transferase, subunit E	K07543 bbsE; benzylsuccinate CoA-transferase BbsE subunit [EC:2.8.3.15]
D      ToN1_01560 bbsF; Succinyl-CoA:(R)-benzylsuccinate-CoA-transferase, subunit F	K07544 bbsF; benzylsuccinate CoA-transferase BbsF subunit [EC:2.8.3.15]
D      ToN1_01540 bbsG; (R)-benzylsuccinyl-CoA dehydrogenase	K07545 bbsG; (R)-benzylsuccinyl-CoA dehydrogenase [EC:1.3.8.3]
D      ToN1_01530 bbsH; Phenylitaconyl-CoA hydratase	K07546 bbsH; (E)-benzylidenesuccinyl-CoA hydratase [EC:4.2.1.180]
D      ToN1_01950 Enoyl-CoA hydratase	K07546 bbsH; (E)-benzylidenesuccinyl-CoA hydratase [EC:4.2.1.180]
D      ToN1_01590 bbsC; 2-[hydroxy(Phenyl)methyl]-succinyl-CoA dehydrogenase, subunit	K07547 bbsC; (2S)-[(R)-hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase BbsC subunit [EC:1.1.1.429]
D      ToN1_01580 bbsD; 2-[hydroxy(Phenyl)methyl]-succinyl-CoA dehydrogenase, subunit	K07548 bbsD; (2S)-[(R)-hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase BbsD subunit [EC:1.1.1.429]
D      ToN1_01610 bbsA; Benzoylsuccinyl-CoA thiolase, subunit	K07549 bbsA; benzoylsuccinyl-CoA thiolase BbsA subunit [EC:2.3.1.310]
D      ToN1_01600 bbsB; Benzoylsuccinyl-CoA thiolase, subunit	K07550 bbsB; benzoylsuccinyl-CoA thiolase BbsB subunit [EC:2.3.1.310]
D      ToN1_07220 iod; 4-isopropylbenzyl alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      ToN1_39370 cmh; FAD-dependent 4-cresol methylhydroxylase	K05797 pchF; 4-cresol dehydrogenase (hydroxylating) flavoprotein subunit [EC:1.17.9.1]
D      ToN1_39350 putative cytochrome c, class I	K20200 pchC; 4-cresol dehydrogenase (hydroxylating) cytochrome subunit
C    00622 Xylene degradation [PATH:apet00622]
D      ToN1_07220 iod; 4-isopropylbenzyl alcohol dehydrogenase	K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D      ToN1_46680 4-oxalocrotonate tautomerase	K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D      ToN1_06990 Alkane/xylene monooxygenase family protein	K10616 cymAa; p-cymene methyl-monooxygenase [EC:1.14.15.25]
C    00633 Nitrotoluene degradation [PATH:apet00633]
D      ToN1_43860 NADH-flavin oxidoreductase/NADH oxidase	K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D      ToN1_47080 Putative NADH:flavin oxidoreductase	K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D      ToN1_25730 hybC; [NiFe]-hydrogenase, large subunit	K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D      ToN1_25700 [NiFe]-hydrogenase, small subunit	K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D      ToN1_25780 NiFe hydrogenase-like superfamily protein	K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D      ToN1_25880 hoxC; [NiFe]-hydrogenase, large subunit	K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D      ToN1_25870 hoxB; [NiFe]-hydrogenase, small subunit	K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D      ToN1_41790 [4Fe-4S] iron-sulfur domain-containing protein	K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D      ToN1_03800 Rieske [2FE-2S] iron-sulfur domain-containing protein	K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component
C    00642 Ethylbenzene degradation [PATH:apet00642]
D      ToN1_03800 Rieske [2FE-2S] iron-sulfur domain-containing protein	K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component
D      ToN1_02610 3-ketoacyl-CoA thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_03670 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_06090 Acetyl-CoA acyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_21710 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      ToN1_50340 Acetyl-CoA acetyltransferase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    00643 Styrene degradation [PATH:apet00643]
D      ToN1_03920 Aldehyde dehydrogenase	K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D      ToN1_38410 aldA4; Aldehyde dehydrogenase	K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D      ToN1_22800 nagL; Maleylpyruvate/Maleylacetoacetate isomerase	K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D      ToN1_43070 Uncharacterized protein	K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D      ToN1_43940 Putative fumarylacetoacetate hydrolase	K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D      ToN1_50590 Amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C    00791 Atrazine degradation
C    00930 Caprolactam degradation [PATH:apet00930]
D      ToN1_46780 Acyl-CoA dehydrogenase	K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D      ToN1_32680 Enoyl-CoA hydratase/isomerase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_46820 paaF; 2,3-dehydroadipyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      ToN1_06950 badK1; putative 4-isopropyl-1-cyclohexene-1-carboxyl-CoA hydratase, BadK-like	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D      ToN1_21760 fadB; Alpha-subunit of fatty acid oxidation complex	K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C    00363 Bisphenol degradation
C    00621 Dioxin degradation
D      ToN1_46680 4-oxalocrotonate tautomerase	K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C    00626 Naphthalene degradation [PATH:apet00626]
D      ToN1_03800 Rieske [2FE-2S] iron-sulfur domain-containing protein	K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component
D      ToN1_40590 S-(hydroxymethyl)glutathione dehydrogenase / class III alcohol dehydrogenase	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C    00624 Polycyclic aromatic hydrocarbon degradation [PATH:apet00624]
D      ToN1_03800 Rieske [2FE-2S] iron-sulfur domain-containing protein	K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component
D      ToN1_33040 Dioxygenase family protein	K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C    00365 Furfural degradation
C    00984 Steroid degradation [PATH:apet00984]
D      ToN1_32220 FAD-dependent oxidoreductase family 2 protein	K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D      ToN1_05180 Flavin reductase like domain-containing protein	K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
C    00980 Metabolism of xenobiotics by cytochrome P450
C    00982 Drug metabolism - cytochrome P450
C    00983 Drug metabolism - other enzymes
B
B  09112 Not included in regular maps
C    09113 Global maps only
#
A09120 Genetic Information Processing
B
B  09121 Transcription
C    03020 RNA polymerase [PATH:apet03020]
D      ToN1_19730 rpoB; DNA-directed RNA polymerase, beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      ToN1_19720 rpoC; DNA-directed RNA polymerase, beta' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      ToN1_19410 rpoA; DNA-directed RNA polymerase, alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      ToN1_27670 rpoZ; DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C    03022 Basal transcription factors
D      ToN1_47040 Uncharacterized protein	K03124 TFIIB; transcription initiation factor TFIIB
C    03040 Spliceosome
B
B  09122 Translation
C    03010 Ribosome [PATH:apet03010]
D      ToN1_15250 rpsA; 30S ribosomal protein S1	K02945 RP-S1; small subunit ribosomal protein S1
D      ToN1_01290 rpsB; 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      ToN1_19600 rpsC; 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      ToN1_19420 rpsD; 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      ToN1_19490 rpsE; 30S ribosomal protein S5	K02988 RP-S5; small subunit ribosomal protein S5
D      ToN1_31390 rpsF; 30S ribosomal protein S6	K02990 RP-S6; small subunit ribosomal protein S6
D      ToN1_19700 rpsG; 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      ToN1_19520 rpsH; 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      ToN1_35950 rpsI; 30S ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      ToN1_19670 rpsJ; 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      ToN1_19430 rpsK; 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      ToN1_19710 rpsL; 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      ToN1_19440 rpsM; 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      ToN1_19530 rpsN; 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      ToN1_08190 rpsO; 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      ToN1_14470 rpsP; 30S ribosomal protein S16	K02959 RP-S16; small subunit ribosomal protein S16
D      ToN1_19570 rpsQ; 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      ToN1_31410 rpsR; 30S ribosomal protein S18	K02963 RP-S18; small subunit ribosomal protein S18
D      ToN1_19620 rpsS; 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      ToN1_36630 rpsT; 30S ribosomal protein S20	K02968 RP-S20; small subunit ribosomal protein S20
D      ToN1_10630 rpsU; 30S ribosomal protein S21	K02970 RP-S21; small subunit ribosomal protein S21
D      ToN1_19760 rplA; 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      ToN1_19630 rplB; 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      ToN1_19660 rplC; 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      ToN1_19650 rplD; 50S ribosomal protein L4	K02926 RP-L4; large subunit ribosomal protein L4
D      ToN1_19540 rplE; 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      ToN1_19510 rplF; 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      ToN1_19740 rplL; 50S ribosomal protein L7/L12	K02935 RP-L7; large subunit ribosomal protein L7/L12
D      ToN1_31420 rplI; 50S ribosomal protein L9	K02939 RP-L9; large subunit ribosomal protein L9
D      ToN1_19750 rplJ; 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      ToN1_19770 rplK; 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      ToN1_35940 rplM; 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      ToN1_19560 rplN; 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      ToN1_19470 rplO; 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      ToN1_19590 rplP; 50S ribosomal protein L16	K02878 RP-L16; large subunit ribosomal protein L16
D      ToN1_19390 rplQ; 50S ribosomal protein L17	K02879 RP-L17; large subunit ribosomal protein L17
D      ToN1_19500 rplR; 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      ToN1_14500 rplS; 50S ribosomal protein L19	K02884 RP-L19; large subunit ribosomal protein L19
D      ToN1_15050 rplT; 50S ribosomal protein L20	K02887 RP-L20; large subunit ribosomal protein L20
D      ToN1_11750 rplU; 50S ribosomal protein L21	K02888 RP-L21; large subunit ribosomal protein L21
D      ToN1_19610 rplV; 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      ToN1_19640 rplW; 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      ToN1_19550 rplX; 50S ribosomal protein L24	K02895 RP-L24; large subunit ribosomal protein L24
D      ToN1_31800 rplY; 50S ribosomal protein L25	K02897 RP-L25; large subunit ribosomal protein L25
D      ToN1_11760 rpmA; 50S ribosomal protein L27	K02899 RP-L27; large subunit ribosomal protein L27
D      ToN1_11190 rpmB; 50S ribosomal protein L28	K02902 RP-L28; large subunit ribosomal protein L28
D      ToN1_19580 rpmC; 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      ToN1_19480 rpmD; 50S ribosomal protein L30	K02907 RP-L30; large subunit ribosomal protein L30
D      ToN1_38720 rpmE; 50S ribosomal protein L31	K02909 RP-L31; large subunit ribosomal protein L31
D      ToN1_10060 rpmF; 50S ribosomal protein L32	K02911 RP-L32; large subunit ribosomal protein L32
D      ToN1_11200 rpmG; 50S ribosomal protein L33	K02913 RP-L33; large subunit ribosomal protein L33
D      ToN1_25330 rpmH; 50S ribosomal protein L34	K02914 RP-L34; large subunit ribosomal protein L34
D      ToN1_15060 rpmI; 50S ribosomal protein L35	K02916 RP-L35; large subunit ribosomal protein L35
C    00970 Aminoacyl-tRNA biosynthesis [PATH:apet00970]
D      ToN1_37401 tRNA-Ala4; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_37404 tRNA-Ala5; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_12153 tRNA-Ala1; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_31433 tRNA-Ala2; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_36003 tRNA-Ala3; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_39763 tRNA-Ala6; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_40331 tRNA-Ala7; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_24051 tRNA-Arg3; tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      ToN1_37232 tRNA-Arg5; tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      ToN1_24052 tRNA-Arg4; tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      ToN1_12051 tRNA-Arg2; tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      ToN1_08151 tRNA-Arg1; tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      ToN1_10161 tRNA-Asn1; tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      ToN1_10162 tRNA-Asn2; tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      ToN1_37403 tRNA-Asp1; tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      ToN1_37406 tRNA-Asp2; tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      ToN1_09782 tRNA-Cys; tRNA-Cys	K14222 tRNA-Cys; tRNA Cys
D      ToN1_31811 tRNA-Gln; tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      ToN1_37402 tRNA-Glu1; tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      ToN1_37405 tRNA-Glu2; tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      ToN1_23631 tRNA-Gly4; tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      ToN1_09781 tRNA-Gly1; tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      ToN1_09783 tRNA-Gly2; tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      ToN1_19802 tRNA-Gly3; tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      ToN1_12154 tRNA-Ile2; tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      ToN1_31432 tRNA-Ile3; tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      ToN1_36002 tRNA-Ile4; tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      ToN1_39762 tRNA-Ile5; tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      ToN1_38041 tRNA-Leu7; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_33291 tRNA-Leu5; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_33292 tRNA-Leu6; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_25181 tRNA-Leu4; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_16841 tRNA-Leu3; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_08441 tRNA-Leu1; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_10661 tRNA-Ile1; tRNA-Ile	K14230 tRNA-Met; tRNA Met
D      ToN1_42981 tRNA-fMet; tRNA-fMet	K14230 tRNA-Met; tRNA Met
D      ToN1_32531 tRNA-Met; tRNA-Met	K14230 tRNA-Met; tRNA Met
D      ToN1_34081 tRNA-Phe; tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      ToN1_08152 tRNA-Pro1; tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      ToN1_11561 tRNA-Pro2; tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      ToN1_15001 tRNA-Pro3; tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      ToN1_44361 tRNA-Ser4; tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      ToN1_14861 tRNA-Ser2; tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      ToN1_37231 tRNA-Ser3; tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      ToN1_14511 tRNA-Ser1; tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      ToN1_10911 tRNA--Thr1; tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      ToN1_19801 tRNA-Thr2; tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      ToN1_19791 tRNA-Trp; tRNA-Trp	K14235 tRNA-Trp; tRNA Trp
D      ToN1_19803 tRNA-Tyr; tRNA-Tyr	K14236 tRNA-Tyr; tRNA Tyr
D      ToN1_39111 tRNA-Val2; tRNA-Val	K14237 tRNA-Val; tRNA Val
D      ToN1_15081 tRNA-Val1; tRNA-Val	K14237 tRNA-Val; tRNA Val
D      ToN1_49140 gltX; Glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      ToN1_24320 gatA; Glutamyl-tRNA(Gln) amidotransferase, subunit A	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      ToN1_12340 Putative amidase	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      ToN1_24340 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      ToN1_24310 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit C	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      ToN1_31300 glnS; Glutamine-tRNA ligase	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D      ToN1_35580 alaS; Alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      ToN1_15530 aspS; Aspartate-tRNA(Asp/Asn) ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      ToN1_32590 glyQ; Glycine--tRNA ligase, alpha subunit	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D      ToN1_32600 glyS; Glycine--tRNA ligase, beta subunit	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D      ToN1_15080 thrS; Threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      ToN1_37190 serS; Serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      ToN1_37770 cysS; Cysteine-tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      ToN1_10320 metG; Methionine-tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      ToN1_15900 putative formyl transferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      ToN1_24840 fmt; Methionyl-tRNA formyltransferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      ToN1_42010 valS; Valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      ToN1_10500 leuS; Leucine-tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      ToN1_11430 ileS; Isoleucine-tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      ToN1_08760 lysS; Lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      ToN1_29740 argS; Arginine-tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      ToN1_35820 proS; Proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      ToN1_33190 hisS; Histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      ToN1_15040 pheS; Phenylalanine--tRNA ligase, alpha subunit	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      ToN1_15030 pheT; Phenylalanine--tRNA ligase, beta subunit	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      ToN1_34240 tyrS1; Tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      ToN1_35990 tyrS2; Tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      ToN1_08280 trpS; Tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C    03013 Nucleocytoplasmic transport
C    03015 mRNA surveillance pathway
C    03008 Ribosome biogenesis in eukaryotes
B
B  09123 Folding, sorting and degradation
C    03060 Protein export [PATH:apet03060]
D      ToN1_19460 secY; Protein translocase subunit	K03076 secY; preprotein translocase subunit SecY
D      ToN1_19790 secE; Protein translocase, subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      ToN1_38040 secG; Protein-export membrane protein	K03075 secG; preprotein translocase subunit SecG
D      ToN1_16880 secD; Protein translocase, subunit D	K03072 secD; preprotein translocase subunit SecD
D      ToN1_16890 secF; Protein-export membrane protein F	K03074 secF; preprotein translocase subunit SecF
D      ToN1_16870 yajC; Preprotein translocase, subunit C	K03210 yajC; preprotein translocase subunit YajC
D      ToN1_25360 yidC; Membrane protein insertase	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      ToN1_16970 secA; Protein translocase, subunit A	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      ToN1_35310 secB; Protein-export protein	K03071 secB; preprotein translocase subunit SecB
D      ToN1_15460 ffh; Signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      ToN1_31930 Signal recognition particle receptor FtsY	K03110 ftsY; fused signal recognition particle receptor
D      ToN1_42200 arsA; Arsenical pump-driving ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      ToN1_32950 tatA; Sec-independent protein translocase protein	K03116 tatA; sec-independent protein translocase protein TatA
D      ToN1_32960 tatB; Sec-independent protein translocase protein	K03117 tatB; sec-independent protein translocase protein TatB
D      ToN1_32970 tatC; Sec-independent protein translocase protein	K03118 tatC; sec-independent protein translocase protein TatC
D      ToN1_09900 lepB; Signal peptidase I	K03100 lepB; signal peptidase I [EC:3.4.21.89]
D      ToN1_11440 lpsA; Lipoprotein signal peptidase	K03101 lspA; signal peptidase II [EC:3.4.23.36]
C    04141 Protein processing in endoplasmic reticulum
C    04130 SNARE interactions in vesicular transport
C    04120 Ubiquitin mediated proteolysis
C    04122 Sulfur relay system [PATH:apet04122]
D      ToN1_09720 iscS; Cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      ToN1_09730 Putative cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      ToN1_11370 Putative thiosulfate sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      ToN1_42000 Sulfur carrier protein, TusA-like	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      ToN1_35660 mnmA; tRNA-specific 2-thiouridylase	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D      ToN1_47730 moaE; Molybdopterin synthase, catalytic subunit	K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D      ToN1_10190 moaA; GTP 3',8-cyclase	K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D      ToN1_01440 Putative molybdopterin synthase, sulfur carrier This/MoaD-like domain-containing	K03636 moaD; sulfur-carrier protein
D      ToN1_29380 Putative MoaD-like protein (molybdopterin synthase sulfur carrier subunit)	K03636 moaD; sulfur-carrier protein
D      ToN1_47720 moaD; Molybdopterin synthase, sulfur carrier subunit	K03636 moaD; sulfur-carrier protein
D      ToN1_35390 thiF; Adenylyltransferase	K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D      ToN1_48820 Molybdopterin biosynthesis protein, MoeB-like	K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D      ToN1_41970 moaC; Cyclic pyranopterin monophosphate synthase	K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D      ToN1_35500 mog; Molybdopterin adenylyltransferase	K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D      ToN1_13620 thiS1; Thiamine biosynthesis protein	K03154 thiS; sulfur carrier protein
D      ToN1_23630 thiS2; Thiamine biosynthesis protein	K03154 thiS; sulfur carrier protein
D      ToN1_41820 Sulfur carrier protein, ThiS/MoaD-like	K03154 thiS; sulfur carrier protein
C    03050 Proteasome
C    03018 RNA degradation [PATH:apet03018]
D      ToN1_35840 rppH; RNA pyrophosphohydrolase	K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D      ToN1_10120 rne; Ribonuclease E	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      ToN1_43420 eno1; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_46510 eno2; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_08170 pnp; Polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D      ToN1_20620 rhlE2; ATP-dependent RNA helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      ToN1_11620 rhlE1; ATP-dependent RNA helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      ToN1_33300 rnr; Ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      ToN1_09780 deaD; ATP-dependent RNA helicase	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      ToN1_16350 ATP-dependent DNA helicase protein	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      ToN1_37420 rho; Transcription termination factor Rho	K03628 rho; transcription termination factor Rho
D      ToN1_37790 dnaK; Chaperone protein	K04043 dnaK; molecular chaperone DnaK
D      ToN1_40690 dnaK3; Chaperone protein	K04043 dnaK; molecular chaperone DnaK
D      ToN1_34030 groL1; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_40660 groL2; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_41470 groL3; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_33230 hfq; RNA-binding protein	K03666 hfq; host factor-I protein
D      ToN1_45710 ppk; Polyphosphate kinase	K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D      ToN1_14130 pcnB; Poly(A) polymerase I	K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B  09124 Replication and repair
C    03030 DNA replication [PATH:apet03030]
D      ToN1_00530 dnaQ1; DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_27730 putative excinuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_38910 Putative DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_40510 dnaQ2; DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_44350 putative DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_10410 dnaE2; DNA polymerase III, alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      ToN1_33530 dnaX; DNA polymerase III gamma subunit/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      ToN1_39720 holB; DNA polymerase III, delta subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      ToN1_10520 holA; DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      ToN1_42030 holC; DNA polymerase III, chi subunit	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      ToN1_25310 dnaN; Beta sliding clamp	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      ToN1_31430 dnaB; Replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      ToN1_10650 dnaG; DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      ToN1_05820 Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_07490 ssb1; Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_19340 ssb2; Single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_00540 rnhA; Ribonuclease H	K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D      ToN1_01150 rnhB; Ribonuclease H II	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      ToN1_30700 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      ToN1_09570 ligA; DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03410 Base excision repair [PATH:apet03410]
D      ToN1_47350 Endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      ToN1_26420 Single-strand selective monofunctional uracil DNA glycosylase	K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
D      ToN1_23720 mutY; A/G-specific adenine glycosylase	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D      ToN1_31860 mutM; Formamidopyrimidine-DNA glycosylase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D      ToN1_46060 putative DNA-3-methyladenine glycosylase	K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D      ToN1_31040 tag; DNA-3-methyladenine glycosidase	K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D      ToN1_45920 Uracil-DNA glycosylase	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      ToN1_22630 xthA; Exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      ToN1_34640 Exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      ToN1_30700 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      ToN1_46130 recJ; Single-stranded-DNA-specific exonuclease	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      ToN1_09570 ligA; DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03420 Nucleotide excision repair [PATH:apet03420]
D      ToN1_45550 mfd; Transcription-repair-coupling factor	K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D      ToN1_19360 uvrA; UvrABC system protein A	K03701 uvrA; excinuclease ABC subunit A
D      ToN1_25010 Uncharacterized protein	K03701 uvrA; excinuclease ABC subunit A
D      ToN1_10140 uvrB; UvrABC system protein B	K03702 uvrB; excinuclease ABC subunit B
D      ToN1_09820 uvrC; UvrABC system protein C	K03703 uvrC; excinuclease ABC subunit C
D      ToN1_10470 uvrD; DNA helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      ToN1_47030 ATP-dependent DNA helicase	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      ToN1_30700 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      ToN1_09570 ligA; DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03430 Mismatch repair [PATH:apet03430]
D      ToN1_00510 mutS; DNA mismatch repair protein	K03555 mutS; DNA mismatch repair protein MutS
D      ToN1_14620 mutL; DNA mismatch repair protein	K03572 mutL; DNA mismatch repair protein MutL
D      ToN1_10470 uvrD; DNA helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      ToN1_47030 ATP-dependent DNA helicase	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      ToN1_36510 xseA; Exodeoxyribonuclease 7, large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      ToN1_11500 xseB; Exodeoxyribonuclease 7, small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      ToN1_46130 recJ; Single-stranded-DNA-specific exonuclease	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      ToN1_05820 Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_07490 ssb1; Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_19340 ssb2; Single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_10410 dnaE2; DNA polymerase III, alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      ToN1_25310 dnaN; Beta sliding clamp	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      ToN1_33530 dnaX; DNA polymerase III gamma subunit/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      ToN1_10520 holA; DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      ToN1_39720 holB; DNA polymerase III, delta subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      ToN1_00530 dnaQ1; DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_27730 putative excinuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_38910 Putative DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_40510 dnaQ2; DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_44350 putative DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_42030 holC; DNA polymerase III, chi subunit	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      ToN1_09570 ligA; DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03440 Homologous recombination [PATH:apet03440]
D      ToN1_46130 recJ; Single-stranded-DNA-specific exonuclease	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      ToN1_05820 Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_07490 ssb1; Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_19340 ssb2; Single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_09860 recO; DNA repair protein	K03584 recO; DNA repair protein RecO (recombination protein O)
D      ToN1_33550 recR; Recombination protein	K06187 recR; recombination protein RecR
D      ToN1_22320 recA; DNA recombination and repair protein	K03553 recA; recombination protein RecA
D      ToN1_30700 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      ToN1_30550 ruvA; Holliday junction ATP-dependent DNA helicase	K03550 ruvA; holliday junction DNA helicase RuvA
D      ToN1_30540 ruvB; Holliday junction ATP-dependent DNA helicase	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D      ToN1_29990 ruvC; Crossover junction endodeoxyribonuclease	K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D      ToN1_21570 recG; ATP-dependent DNA helicase	K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D      ToN1_27310 recB; RecBCD enzyme, subunit B	K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D      ToN1_27300 recC; RecBCD enzyme, subunit C	K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D      ToN1_16700 RecD helicase-like protein helix-hairpin-helix domain containing protein	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      ToN1_18220 RecD helicase-like helix-hairpin-helix domain containing	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      ToN1_19280 RecD helicase-like helix-hairpin-helix domain containing	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      ToN1_27320 recD; RecBCD enzyme, subunit D	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      ToN1_10410 dnaE2; DNA polymerase III, alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      ToN1_25310 dnaN; Beta sliding clamp	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      ToN1_33530 dnaX; DNA polymerase III gamma subunit/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      ToN1_10520 holA; DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      ToN1_39720 holB; DNA polymerase III, delta subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      ToN1_00530 dnaQ1; DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_27730 putative excinuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_38910 Putative DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_40510 dnaQ2; DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_44350 putative DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_42030 holC; DNA polymerase III, chi subunit	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      ToN1_25690 priA; Primosomal protein N'	K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D      ToN1_31400 priB; Primosomal replication protein	K02686 priB; primosomal replication protein N
C    03450 Non-homologous end-joining
C    03460 Fanconi anemia pathway
B
B  09126 Chromosome
C    03082 ATP-dependent chromatin remodeling
C    03083 Polycomb repressive complex
B
B  09125 Information processing in viruses
C    03230 Viral genome structure
C    03240 Viral replication
C    03250 Viral life cycle - HIV-1 [PATH:apet03250]
D      ToN1_37740 ppiA; Peptidyl-prolyl cis-trans isomerase A	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C    03260 Virion - Human immunodeficiency virus
C    03271 Virion - Rotavirus
C    03262 Virion - Coronavirus
C    03261 Virion - Influenza virus
C    03263 Virion - Enterovirus
C    03264 Virion - Flavivirus
C    03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C    03272 Virion - Hepatitis viruses
C    03266 Virion - Herpesvirus
C    03268 Virion - Orthopoxvirus
C    03267 Virion - Adenovirus
C    03259 Virion - Bacteriophages T4 and T7
C    03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B  09131 Membrane transport
C    02010 ABC transporters [PATH:apet02010]
D      ToN1_45470 cysP2; Sulfate ABC transporter, periplasmic binding protein	K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D      ToN1_36490 Sulfate ABC transporter periplasmic binding protein	K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D      ToN1_36470 cysT1; Sulfate ABC transporter, permease protein	K02046 cysU; sulfate/thiosulfate transport system permease protein
D      ToN1_45480 cysT2; Sulfate ABC transporter, permease protein	K02046 cysU; sulfate/thiosulfate transport system permease protein
D      ToN1_36460 cysW1; Sulfate ABC transporter, permease protein	K02047 cysW; sulfate/thiosulfate transport system permease protein
D      ToN1_45490 cysW2; Sulfate ABC transporter, permease protein	K02047 cysW; sulfate/thiosulfate transport system permease protein
D      ToN1_36450 cysA1; Sulfate ABC transporter, ATP-binding protein	K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D      ToN1_45500 cysA2; Sulfate ABC transporter, ATP-binding protein	K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D      ToN1_29590 Molybdate or tungstate transport system permease protein	K05772 tupA; tungstate transport system substrate-binding protein
D      ToN1_41840 ABC transporter, permease protein	K05773 tupB; tungstate transport system permease protein
D      ToN1_41850 ABC transporter, ATP-binding protein	K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D      ToN1_33330 Uncharacterized protein	K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D      ToN1_33340 nasB; Nitrate ABC transporter, permease protein	K15577 nrtB; nitrate/nitrite transport system permease protein
D      ToN1_33350 nasD; Nitrate ABC transporter, ATP-binding protein	K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D      ToN1_23830 modA; Molybdate-binding protein	K02020 modA; molybdate transport system substrate-binding protein
D      ToN1_23820 modB; Molybdenum transport system, permease protein	K02018 modB; molybdate transport system permease protein
D      ToN1_23810 modC; Molybdenum import ATP-binding protein	K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D      ToN1_25590 Uncharacterized protein	K02012 afuA; iron(III) transport system substrate-binding protein
D      ToN1_47490 Putative Fe(3+) ABC transporter, substrate-binding protein	K02012 afuA; iron(III) transport system substrate-binding protein
D      ToN1_47460 ABC transporter, permease protein	K02011 afuB; iron(III) transport system permease protein
D      ToN1_47450 ABC transporter, ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      ToN1_27170 Putrescine-binding periplasmic protein	K11073 potF; putrescine transport system substrate-binding protein
D      ToN1_27200 potC; Spermidine/putrescine transport system permease protein	K11074 potI; putrescine transport system permease protein
D      ToN1_27190 potB2; Spermidine/putrescine transport system permease protein	K11075 potH; putrescine transport system permease protein
D      ToN1_27180 potA2; Spermidine/putrescine import ATP-binding protein	K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D      ToN1_44540 ABC transporter, substrate-binding protein	K02002 proX; glycine betaine/proline transport system substrate-binding protein
D      ToN1_44850 Glycine/betaine ABC transporter, substrate-binding protein	K02002 proX; glycine betaine/proline transport system substrate-binding protein
D      ToN1_44560 ABC transporter, permease protein	K02001 proW; glycine betaine/proline transport system permease protein
D      ToN1_44890 Putative glycine/betaine ABC transporter, permease protein	K02001 proW; glycine betaine/proline transport system permease protein
D      ToN1_44550 ABC transporter, ATP-binding protein	K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D      ToN1_44880 proV; Glycine/betaine ABC transporter, ATP-binding protein	K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D      ToN1_30190 Uncharacterized protein	K05846 opuBD; osmoprotectant transport system permease protein
D      ToN1_44120 ABC transporter, ATP-binding protein	K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      ToN1_44090 Bacterial extracellular solute-binding domain-containing protein	K10236 thuE; trehalose/maltose transport system substrate-binding protein
D      ToN1_44100 ABC transporter, permease protein	K10237 thuF; trehalose/maltose transport system permease protein
D      ToN1_44110 ABC transporter, permease protein	K10238 thuG; trehalose/maltose transport system permease protein
D      ToN1_13150 Putative toluene tolerance protein	K07323 mlaC; phospholipid transport system substrate-binding protein
D      ToN1_32770 mlaC; Phospholipid-binding lipoprotein	K07323 mlaC; phospholipid transport system substrate-binding protein
D      ToN1_32750 mlaD; Phospholipid ABC transporter periplasmic binding protein	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      ToN1_45750 ABC transporter related	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      ToN1_46100 ABC transporter related	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      ToN1_32740 mlaE; Phospholipid ABC transporter permease protein	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      ToN1_45730 Putative ABC transporter, permease protein	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      ToN1_46080 Putative ABC transporter, permease protein	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      ToN1_32780 STAS domain-containing protein	K07122 mlaB; phospholipid transport system transporter-binding protein
D      ToN1_32730 mlaF; Phospholipid ABC transporter ATP-binding protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      ToN1_45740 Putative ABC transporter, ATP-binding protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      ToN1_46090 Putative ABC transporter, ATP-binding protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      ToN1_43770 rbsB; Ribose ABC transporter, periplasmic ribose-binding protein	K10439 rbsB; ribose transport system substrate-binding protein
D      ToN1_43780 rbsC; Ribose ABC transporter, permease protein	K10440 rbsC; ribose transport system permease protein
D      ToN1_43790 rbsA; Ribose ABC transporter, ATP-binding protein	K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D      ToN1_21800 Phosphate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      ToN1_33110 Putative ABC transporter substrate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      ToN1_37990 pstS; Phosphate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      ToN1_38000 pstC; Phosphate transport system permease protein	K02037 pstC; phosphate transport system permease protein
D      ToN1_38010 pstA; Phosphate transport system permease protein	K02038 pstA; phosphate transport system permease protein
D      ToN1_38020 pstB; Phosphate import ATP-binding protein	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      ToN1_12490 gltI1; Glutamate/aspartate periplasmic-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      ToN1_24610 gltI2; Glutamate/aspartate periplasmic-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      ToN1_24590 gltK2; Glutamate/aspartate transport system permease protein	K10002 gltK; glutamate/aspartate transport system permease protein
D      ToN1_12460 gltK1; Glutamate/aspartate transport system permease protein	K10002 gltK; glutamate/aspartate transport system permease protein
D      ToN1_24600 gltJ2; Glutamate/aspartate transport system permease protein	K10003 gltJ; glutamate/aspartate transport system permease protein
D      ToN1_12470 gltJ1; Glutamate/aspartate transport system permease protein	K10003 gltJ; glutamate/aspartate transport system permease protein
D      ToN1_24580 gltL3; Glutamate/aspartate transport ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_00150 gltL1; Glutamate/aspartate transport ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_12450 gltL2; Glutamate/aspartate transport ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_41120 Amino acid ABC transporter, substrate-binding protein	K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D      ToN1_41140 Amino acid ABC transporter, permease protein	K10023 aotM; arginine/ornithine transport system permease protein
D      ToN1_41130 Amino acid ABC transporter, permease protein	K10024 aotQ; arginine/ornithine transport system permease protein
D      ToN1_41150 Amino acid ABC transporter, ATP-binding protein	K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_00110 ABC transporter, branched-chain amino acid periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_02370 livB; Amino acid ABC transport system, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_19960 Putative amino acid/amide ABC transporter, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_22250 High-affinity branched-chain amino acid transport system, substrate binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_23150 High-affinity branched-chain amino acid transport system, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_23160 High-affinity branched-chain amino acid transport system, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_23750 Putative amino acid ABC transporter, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_09340 Amino acid/amide ABC transporter, periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_26730 Putative aromatic compound ABC transporter periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_28920 Amino acid/amide ABC transporter, periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_29280 Amino acid ABC transporter periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_40230 Amino acid ABC transporter periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_43990 Amino acid/amide ABC transporter, periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_48950 ABC transporter, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_49260 High-affinity branched-chain amino acid transport system, periplasmic component	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_50450 Leucine-binding domain-containing protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_50460 Leucine-binding domain-containing protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_02360 livH; putative phenylacetate ABC transport system permease protein 1	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_19980 putative ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_22260 High-affinity branched-chain amino acid transport system, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_23170 High-affinity branched-chain amino acid transport system, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_23770 ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_26740 Putative aromatic compound ABC transporter permease protein I	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_28930 Amino acid/amide ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_48940 ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_49270 High-affinity branched-chain amino acid transport system, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_02350 livM; putative phenylacetate ABC transport system permease protein 2	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_19970 putative ABC transporter, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_22270 High-affinity branched-chain amino acid transport system, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_23180 High-affinity branched-chain amino acid transport system, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_23760 ABC transporter, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_26750 Putative aromatic compound ABC transporter permease protein II	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_28940 Amino acid/amide ABC transporter, permease protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_48930 ABC transporter, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_49280 High-affinity branched-chain amino acid transport system, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_02340 livG; putative phenylacetate ABC transporter ATP-binding protein 1	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_19990 Putative branched-chain amino acid ABC transporter, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_22230 High-affinity branched-chain amino acid transport, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_23190 High-affinity branched-chain amino acid transport, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_26760 Putative aromatic compound ABC transporter, ATP binding protein I	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_43110 Putative ABC transporter, permease protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_48920 ABC transporter, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_49290 Putative high-affinity branched-chain amino acid transport, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_02330 livF; putative phenylacetate ABC transporter ATP-binding protein 2	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_19950 putative ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_22240 High-affinity branched-chain amino acid transport, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_23200 High-affinity branched-chain amino acid transport, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_26770 Putative aromatic compound ABC transporter, ATP binding protein II	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_28950 Amino acid/amide ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_43120 Putative ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_48910 ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_49300 High-affinity branched-chain amino acid transport, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_29500 nodj; ABC transporter, permease protein	K09694 nodJ; lipooligosaccharide transport system permease protein
D      ToN1_29510 nodI; Nod factor export ATP-binding protein I	K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D      ToN1_46180 ABC transporter, permease protein, lipoprotein-releasing system	K09808 lolC_E; lipoprotein-releasing system permease protein
D      ToN1_46190 ABC transporter, ATP-binding protein, lipoprotein-releasing system	K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D      ToN1_27870 ccmD1; Heme exporter protein D	K02196 ccmD; heme exporter protein D
D      ToN1_28050 ccmD2; Heme exporter protein D	K02196 ccmD; heme exporter protein D
D      ToN1_27860 ccmC1; Heme exporter protein C	K02195 ccmC; heme exporter protein C
D      ToN1_28060 ccmC2; Heme exporter protein C	K02195 ccmC; heme exporter protein C
D      ToN1_27850 ccmB; Heme exporter protein B	K02194 ccmB; heme exporter protein B
D      ToN1_27840 ccmA; Cytochrome c biogenesis ATP-binding export protein	K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D      ToN1_42050 LPS export ABC transporter, permease protein	K07091 lptF; lipopolysaccharide export system permease protein
D      ToN1_42060 LPS export ABC transporter, permease protein	K11720 lptG; lipopolysaccharide export system permease protein
D      ToN1_22340 lptB; Lipopolysaccharide export system, ATP-binding protein	K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D      ToN1_00970 nosY; Nitrous oxide reductase, maturation protein (permease protein)	K19341 nosY; Cu-processing system permease protein
D      ToN1_00960 nosF; Nitrous oxide reductase, maturation protein (ATP-binding protein)	K19340 nosF; Cu-processing system ATP-binding protein
D      ToN1_31950 putative cell division protein, FtsX	K09811 ftsX; cell division transport system permease protein
D      ToN1_31940 ftsE; Cell division ATP-binding protein	K09812 ftsE; cell division transport system ATP-binding protein
D      ToN1_30820 msbA; Lipid A export ATP-binding/permease protein	K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D      ToN1_09160 Fusion of ABC transporter-type transmembrane and ATP binding protein	K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D      ToN1_21890 putative peptide ABC transporter fusion protein of transmembrane and ATP binding protein	K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D      ToN1_18330 ABC transporter, ATP-binding and permease fusion protein	K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D      ToN1_27250 Proteases secretion ATP-binding protein D	K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D      ToN1_18610 macB; Macrolide export ATP-binding/permease protein	K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D      ToN1_21850 Putative ABC transporter, ATP-binding protein	K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C    02060 Phosphotransferase system (PTS) [PATH:apet02060]
D      ToN1_26520 PTS related phosphoenolpyruvate-protein phosphotransferase	K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D      ToN1_26530 PTS related phosphocarrier protein	K02784 ptsH; phosphocarrier protein HPr
D      ToN1_26540 Phosphotransferase system domain-containing protein, mannose-type IIA component	K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D      ToN1_22370 Phosphoenolpyruvate-dependent sugar phosphotransferase family protein	K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C    03070 Bacterial secretion system [PATH:apet03070]
D      ToN1_17570 Type I secretion outer membrane protein, TolC family	K12340 tolC; outer membrane protein
D      ToN1_09180 putative secretion protein	K11003 hlyD; membrane fusion protein, hemolysin D
D      ToN1_09160 Fusion of ABC transporter-type transmembrane and ATP binding protein	K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D      ToN1_11820 General secretion pathway protein D	K02453 gspD; general secretion pathway protein D
D      ToN1_11890 Type II secretion system protein F	K02455 gspF; general secretion pathway protein F
D      ToN1_11800 Putative type II secretion system protein G	K02456 gspG; general secretion pathway protein G
D      ToN1_11810 General secretion pathway protein G	K02456 gspG; general secretion pathway protein G
D      ToN1_27360 Type II secretion system protein G	K02456 gspG; general secretion pathway protein G
D      ToN1_27420 Putative type II secretion system protein G	K02456 gspG; general secretion pathway protein G
D      ToN1_27430 Putative type II secretion system protein G	K02456 gspG; general secretion pathway protein G
D      ToN1_11880 Type II secretion system protein E	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      ToN1_16880 secD; Protein translocase, subunit D	K03072 secD; preprotein translocase subunit SecD
D      ToN1_16890 secF; Protein-export membrane protein F	K03074 secF; preprotein translocase subunit SecF
D      ToN1_19790 secE; Protein translocase, subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      ToN1_38040 secG; Protein-export membrane protein	K03075 secG; preprotein translocase subunit SecG
D      ToN1_19460 secY; Protein translocase subunit	K03076 secY; preprotein translocase subunit SecY
D      ToN1_16870 yajC; Preprotein translocase, subunit C	K03210 yajC; preprotein translocase subunit YajC
D      ToN1_25360 yidC; Membrane protein insertase	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      ToN1_16970 secA; Protein translocase, subunit A	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      ToN1_31930 Signal recognition particle receptor FtsY	K03110 ftsY; fused signal recognition particle receptor
D      ToN1_35310 secB; Protein-export protein	K03071 secB; preprotein translocase subunit SecB
D      ToN1_15460 ffh; Signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      ToN1_32950 tatA; Sec-independent protein translocase protein	K03116 tatA; sec-independent protein translocase protein TatA
D      ToN1_32960 tatB; Sec-independent protein translocase protein	K03117 tatB; sec-independent protein translocase protein TatB
D      ToN1_32970 tatC; Sec-independent protein translocase protein	K03118 tatC; sec-independent protein translocase protein TatC
D      ToN1_17630 Type VI secretion system, RhsGE-associated Vgr protein	K11904 vgrG; type VI secretion system secreted protein VgrG
D      ToN1_10790 Putative type VI secretion system secreted protein, VgrG	K11904 vgrG; type VI secretion system secreted protein VgrG
D      ToN1_25930 Rhs element Vgr protein	K11904 vgrG; type VI secretion system secreted protein VgrG
D      ToN1_27150 Putative type VI secretion system secretet protein VgrGA	K11904 vgrG; type VI secretion system secreted protein VgrG
D      ToN1_10710 Putative type VI secretion system secreted protein, Hcp	K11903 hcp; type VI secretion system secreted protein Hcp
D      ToN1_10760 Putative type VI secretion system protein, VasD	K11906 vasD; type VI secretion system protein VasD
D      ToN1_15380 Type VI secretion system protein	K11891 impL; type VI secretion system protein ImpL
D      ToN1_10780 Putative type VI secretion system protein, ImpK	K11892 impK; type VI secretion system protein ImpK
D      ToN1_10670 clpB1; Chaperone protein	K11907 vasG; type VI secretion system protein VasG
B
B  09132 Signal transduction
C    02020 Two-component system [PATH:apet02020]
D      ToN1_24370 phoR; Phosphate regulon sensor protein	K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D      ToN1_24380 phoB; Phosphate regulon transcriptional regulatory protein	K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D      ToN1_44340 Two component system response regulator, CheY-like superfamily	K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D      ToN1_42610 Alkaline phosphatase	K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D      ToN1_21800 Phosphate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      ToN1_33110 Putative ABC transporter substrate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      ToN1_37990 pstS; Phosphate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      ToN1_45870 Two component system sensor histidine kinase	K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D      ToN1_45880 Two component system response regulator, OmpR family	K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D      ToN1_13950 putative periplasmic serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_09930 Putative periplasmic serine endoprotease, DegP-like	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_24930 putative periplasmic serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_18820 Two component system sensor histidine kinase	K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D      ToN1_18830 Two component system response regulator, CheY-like superfamily	K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D      ToN1_18860 Periplasmic copper binding family protein, CusF-related	K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D      ToN1_18880 RND family efflux transporter, CusF-related	K07798 cusB; membrane fusion protein, copper/silver efflux system
D      ToN1_18890 cusA; Cation efflux system protein	K07787 cusA; copper/silver efflux system protein
D      ToN1_36290 flhD; Flagellar transcriptional regulator	K02403 flhD; flagellar transcriptional activator FlhD
D      ToN1_36300 flhC; Flagellar transcriptional regulator	K02402 flhC; flagellar transcriptional activator FlhC
D      ToN1_40170 Flagellin domain-containing protein	K02406 fliC; flagellin
D      ToN1_14800 fliA; RNA polymerase sigma factor	K02405 fliA; RNA polymerase sigma factor FliA
D      ToN1_14790 motA1; Flagellar motor protein A	K02556 motA; chemotaxis protein MotA
D      ToN1_36320 motA2; Flagellar motor protein	K02556 motA; chemotaxis protein MotA
D      ToN1_25610 Two component system sensor histidine kinase	K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D      ToN1_25600 Two component system response regulator, CheY-like superfamily	K07774 tctD; two-component system, OmpR family, response regulator TctD
D      ToN1_25640 Putative tricarboxylic transport membrane protein	K07793 tctA; putative tricarboxylic transport membrane protein
D      ToN1_25630 Putative tricarboxylic transport membrane protein	K07794 tctB; putative tricarboxylic transport membrane protein
D      ToN1_25620 Putative tricarboxylic transport membrane protein	K07795 tctC; putative tricarboxylic transport membrane protein
D      ToN1_16120 putative cytochrome oxidase assembly protein, CtaA family	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      ToN1_25320 dnaA; Chromosomal replication initiator protein	K02313 dnaA; chromosomal replication initiator protein
D      ToN1_04140 putative dicarboxylate lyase	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      ToN1_05530 HpcH/HpaI aldolase family protein	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      ToN1_07410 Citrate lyase	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      ToN1_12230 HpcH/HpaI aldolase family protein	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      ToN1_47550 HpcH/HpaI aldolase/citrate lyase domain-containing protein	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      ToN1_36790 Putative two component system sensor histidine kinase	K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D      ToN1_34420 Two component system response regulator, CheY-like superfamily	K08083 algR; two-component system, LytTR family, response regulator AlgR
D      ToN1_00870 narQ; Nitrate/nitrite sensor protein	K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D      ToN1_27750 narX; Nitrate/nitrite sensor histidine kinase	K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D      ToN1_00880 narP; Nitrate/nitrite response regulator protein	K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D      ToN1_20330 Putative two component system response regulator	K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D      ToN1_27760 narL; Nitrate/nitrite response regulator protein	K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D      ToN1_00830 narG; Respiratory nitrate reductase, alpha subunit	K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D      ToN1_00840 narH; Respiratory nitrate reductase, beta subunit	K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D      ToN1_00860 narI; Respiratory nitrate reductase, gamma subunit	K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D      ToN1_00850 narJ; Respiratory nitrate reductase, chaperone	K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D      ToN1_30050 frdA; Fumarate reductase, flavoprotein subunit	K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      ToN1_30060 frdB; Fumarate reductase, iron-sulfur subunit	K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      ToN1_30070 frdC; Fumarate reductase, subunit C	K00246 frdC; succinate dehydrogenase subunit C
D      ToN1_30080 frdD; Fumarate reductase, subunit D	K00247 frdD; succinate dehydrogenase subunit D
D      ToN1_21000 Histidine kinase	K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D      ToN1_41060 Two component system sensor histidine kinase	K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D      ToN1_20990 Transcriptional regulator, LuxR family	K20264 fusR; two-component system, NarL family, response regulator FusR
D      ToN1_13110 Transcriptional regulator, LuxR family	K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D      ToN1_41050 Two component system response regulator, LuxR family	K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D      ToN1_41610 Transcriptional regulator, LuxR family	K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D      ToN1_20370 Flp/Fap pilin component family protein	K02651 flp; pilus assembly protein Flp/PilA
D      ToN1_20380 Flp/Fap pilin component family protein	K02651 flp; pilus assembly protein Flp/PilA
D      ToN1_20390 Flp/Fap pilin component family protein	K02651 flp; pilus assembly protein Flp/PilA
D      ToN1_20420 Pilus assambly protein	K02279 cpaB; pilus assembly protein CpaB
D      ToN1_20430 Type II/III secretion system family protein	K02280 cpaC; pilus assembly protein CpaC
D      ToN1_20480 Response regulator receiver domain protein	K02282 cpaE; pilus assembly protein CpaE
D      ToN1_20490 putative secretion ATPase protein, similar to bacterial type II/IV secretion system protein	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D      ToN1_20500 Type II secretion system F domain-containing protein	K12510 tadB; tight adherence protein B
D      ToN1_20510 Type II secretion system F domain protein	K12511 tadC; tight adherence protein C
D      ToN1_01310 glnD; Bifunctional uridylyltransferase/uridylyl-removing enzyme	K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D      ToN1_37100 glnB2; Nitrogen regulatory protein P-II	K04751 glnB; nitrogen regulatory protein P-II 1
D      ToN1_31590 ntrB; Nitrogen assimilation sensor kinase	K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D      ToN1_31580 ntrC; DNA-binding transcriptional regulator NtrC	K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D      ToN1_25420 Two component system sensor histidine kinase	K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D      ToN1_25430 Two component system response regulator, sigma-54 specific	K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D      ToN1_08580 Two component system sensor histidine kinase	K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D      ToN1_27330 Two component system sensor histidine kinase	K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D      ToN1_17710 PAS modulated transcriptional regulator, sigma-54-specific (Fis-type)	K07713 zraR; two-component system, NtrC family, response regulator HydG
D      ToN1_27340 Two component system response regulator, sigma54-specific	K07714 atoC; two-component system, NtrC family, response regulator AtoC
D      ToN1_27970 Two component system response regulator, sigma54-specific	K07714 atoC; two-component system, NtrC family, response regulator AtoC
D      ToN1_42220 Two component system response regulator	K07714 atoC; two-component system, NtrC family, response regulator AtoC
D      ToN1_03700 atoD; Acetate CoA-transferase, alpha subunit	K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D      ToN1_03690 atoA; Acetate CoA-transferase, beta subunit	K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_12770 dctA1; C4-dicarboxylate transport protein	K11103 dctA; aerobic C4-dicarboxylate transport protein
D      ToN1_30030 dctA2; C4-dicarboxylate transport protein	K11103 dctA; aerobic C4-dicarboxylate transport protein
D      ToN1_18930 Two component system sensor histidine kinase	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      ToN1_18920 Two component system response regulator, sigma54-specific	K02667 pilR; two-component system, NtrC family, response regulator PilR
D      ToN1_22350 rpoN; RNA polymerase sigma-54 factor	K03092 rpoN; RNA polymerase sigma-54 factor
D      ToN1_18900 pilA; Tfp structural protein	K02650 pilA; type IV pilus assembly protein PilA
D      ToN1_35780 Two component system sensor histidine kinase	K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D      ToN1_35760 Two component system response regulator, CheY-like superfamily	K07715 glrR; two-component system, NtrC family, response regulator GlrR
D      ToN1_25870 hoxB; [NiFe]-hydrogenase, small subunit	K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D      ToN1_25780 NiFe hydrogenase-like superfamily protein	K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D      ToN1_25880 hoxC; [NiFe]-hydrogenase, large subunit	K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D      ToN1_25890 Two component system, sensor histidine kinase	K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D      ToN1_25860 hoxA; Hydrogenase transcriptional regulatory protein	K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D      ToN1_25700 [NiFe]-hydrogenase, small subunit	K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D      ToN1_25730 hybC; [NiFe]-hydrogenase, large subunit	K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D      ToN1_36340 Chemotaxis receptor methyltransferase	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      ToN1_03660 Chemotaxis methyl-accepting receptor family protein, Tar-related	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_19030 Chemotaxis methyl-accepting receptor family protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_23370 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_23870 Methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_24000 Methyl-accepting chemotaxis sensory transducer, single cache domain-containing	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_08750 Methyl-accepting chemotaxis protein (MCP)	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_10380 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_27070 Methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_36150 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_38340 putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_40270 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_46990 Methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_36400 Chemotaxis protein, CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      ToN1_36380 cheY; Chemotaxis protein CheY	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      ToN1_36350 Protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      ToN1_36360 Chemotaxis protein CheV-like	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      ToN1_36370 Chemotaxis protein CheV-like	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      ToN1_17980 pilJ; Twitching motility transmembrane protein	K02660 pilJ; twitching motility protein PilJ
D      ToN1_17970 pilI; Twitching motility protein	K02659 pilI; twitching motility protein PilI
D      ToN1_17990 pilL; Type IV pilus hybrid sensor kinase/response regulator	K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D      ToN1_17950 pilG; Type IV pilus response regulator, CheY-like	K02657 pilG; twitching motility two-component system response regulator PilG
D      ToN1_17960 pilH; Type IV pilus response regulator, CheY-likeT	K02658 pilH; twitching motility two-component system response regulator PilH
D      ToN1_09060 Two component system response regulator, CheY-like	K11443 divK; two-component system, cell cycle response regulator DivK
D      ToN1_48490 Response regulator receiver domain-containing protein	K11443 divK; two-component system, cell cycle response regulator DivK
D      ToN1_16750 dctS; Two component system sensor histidine kinase	K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D      ToN1_16760 dctR; Two component transcriptional regulator, LuxR family	K11712 dctR; two-component system, LuxR family, response regulator DctR
D      ToN1_16740 dctP5; C4-dicarboxylate-binding periplasmic protein	K11688 dctP; C4-dicarboxylate-binding protein DctP
D      ToN1_04090 dctP2; C4-dicarboxylate-binding periplasmic protein	K11688 dctP; C4-dicarboxylate-binding protein DctP
D      ToN1_16730 dctQ5; C4-dicarboxylate TRAP transporter, small permease protein	K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D      ToN1_04100 dctQ2; C4-dicarboxylate TRAP transporter small permease protein	K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D      ToN1_12300 dctQ3; C4-dicarboxylate TRAP transporter small permease protein	K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D      ToN1_16720 dctM5; C4-dicarboxylate TRAP transporter, large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_04110 dctM2; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_21040 dctM6; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_12290 dctM3; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_13560 dctM4; C4-dicarboxylate TRAP transporter, large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_44450 dctM10; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_44730 dctM11; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_50010 dctM12; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_24110 Two component system histidine kinase	K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D      ToN1_24140 ttrA; Tetrathionate reductase, subunit A	K08357 ttrA; tetrathionate reductase subunit A
D      ToN1_24160 ttrB; Tetrathionate reductase, subunit B	K08358 ttrB; tetrathionate reductase subunit B
D      ToN1_24150 ttrC; Tetrathionate reductase, subunit C	K08359 ttrC; tetrathionate reductase subunit C
D      ToN1_28980 Two component system sensor histidine kinase	K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D      ToN1_24120 Two component system response regulator, LuxR-like superfamily	K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D      ToN1_28990 Two component transcriptional regulator, LuxR family	K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D      ToN1_48230 Signal transduction response regulator, LuxR family	K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D      ToN1_48290 Putative two component system response regulator	K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D      ToN1_48430 Signal transduction response regulator, LuxR family	K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D      ToN1_07520 Winged helix-like DNA-binding domain superfamily protein	K15861 fixK; CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
D      ToN1_40070 Two component system sensor histidine kinase	K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D      ToN1_40080 Two component system response regulator, CheY-like superfamily	K10943 flrC; two-component system, response regulator FlrC
D      ToN1_12410 dctD; C4-dicarboxylate transport transcriptional regulatory protein	K17061 aauR; two-component system, response regulator AauR
D      ToN1_24580 gltL3; Glutamate/aspartate transport ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_00150 gltL1; Glutamate/aspartate transport ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_12450 gltL2; Glutamate/aspartate transport ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_24590 gltK2; Glutamate/aspartate transport system permease protein	K10002 gltK; glutamate/aspartate transport system permease protein
D      ToN1_12460 gltK1; Glutamate/aspartate transport system permease protein	K10002 gltK; glutamate/aspartate transport system permease protein
D      ToN1_24600 gltJ2; Glutamate/aspartate transport system permease protein	K10003 gltJ; glutamate/aspartate transport system permease protein
D      ToN1_12470 gltJ1; Glutamate/aspartate transport system permease protein	K10003 gltJ; glutamate/aspartate transport system permease protein
D      ToN1_12490 gltI1; Glutamate/aspartate periplasmic-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      ToN1_24610 gltI2; Glutamate/aspartate periplasmic-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      ToN1_12480 ansB; L-asparaginase II	K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D      ToN1_38580 Two component system response regulator	K13815 rpfG; two-component system, response regulator RpfG
D      ToN1_02290 Transcriptional regulator, Crp/Fnr family	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      ToN1_02300 Cyclic nucleotide-binding domain-containing protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      ToN1_37140 Putative transcriptional regulator, Crp/Fnr family	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      ToN1_00910 Putative two component system sensory histidine kinase	K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D      ToN1_00900 Putative two component system response regulator	K15012 regA; two-component system, response regulator RegA
D      ToN1_33560 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit	K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D      ToN1_33570 petB; Cytochrome b	K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D      ToN1_33580 petC; Cytochrome c1	K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D      ToN1_02460 Putative cytochrome c	K08738 CYC; cytochrome c
D      ToN1_04030 putative cytochrome c	K08738 CYC; cytochrome c
D      ToN1_04630 Double Cache domain 2-containing protein	K08738 CYC; cytochrome c
D      ToN1_06250 Single Cache domain 2 domain-containing protein	K08738 CYC; cytochrome c
D      ToN1_18240 putative cytochrome c	K08738 CYC; cytochrome c
D      ToN1_20050 Putative cytochrome c-551	K08738 CYC; cytochrome c
D      ToN1_20960 Putative cytochrome c	K08738 CYC; cytochrome c
D      ToN1_10370 Cytochrome c	K08738 CYC; cytochrome c
D      ToN1_13550 Double Cache domain 2-containing protein	K08738 CYC; cytochrome c
D      ToN1_35020 Single Cache domain 2 domain-containing protein	K08738 CYC; cytochrome c
D      ToN1_41100 Double Cache domain 2-containing protein	K08738 CYC; cytochrome c
D      ToN1_41940 Cytochrome c	K08738 CYC; cytochrome c
D      ToN1_36860 ccoN; Cbb3-type cytochrome c oxidase, subunit N	K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D      ToN1_49780 putative cytochrome c oxidase, transmembrane subunit I	K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D      ToN1_36870 ccoO; Cbb3-type cytochrome c oxidase, subunit O	K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D      ToN1_49770 putative cytochrome c, oxidase subunit O	K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D      ToN1_36880 ccoQ; Cbb3-type cytochrome c oxidase, subunit Q	K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D      ToN1_28270 Cytochrome c, class I	K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D      ToN1_36890 ccoP; Cbb3-type cytochrome c oxidase, subunit P	K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D      ToN1_02540 cydA; Cytochrome bd ubiquinol oxidase, subunit I	K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D      ToN1_02550 cydB; Cytochrome bd ubiquinol oxidase, subunit II	K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D      ToN1_02560 cydX; Cytochrome bd ubiquinol oxidase, subunit X	K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D      ToN1_17570 Type I secretion outer membrane protein, TolC family	K12340 tolC; outer membrane protein
D      ToN1_16050 Putative polysaccharide export protein	K01991 wza; polysaccharide biosynthesis/export protein
D      ToN1_34700 Putative exopolysaccharide export protein	K01991 wza; polysaccharide biosynthesis/export protein
D      ToN1_10130 Phosphotyrosine protein phosphatase	K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D      ToN1_16000 UDP-N-acetylglucosamine 2-epimerase	K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D      ToN1_19900 Two component system fusion protein (sensory histidine kinase and response regulator, CheY-like)	K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D      ToN1_38570 HPt (histidine-containing phosphotransfer) domain-containing protein	K20976 hptB; histidine phosphotransfer protein HptB
D      ToN1_39800 Anti-sigma-28 factor, FlgM family	K02398 flgM; negative regulator of flagellin synthesis FlgM
C    04010 MAPK signaling pathway
C    04013 MAPK signaling pathway - fly
C    04016 MAPK signaling pathway - plant
C    04011 MAPK signaling pathway - yeast
C    04012 ErbB signaling pathway
C    04014 Ras signaling pathway
C    04015 Rap1 signaling pathway
C    04310 Wnt signaling pathway
C    04330 Notch signaling pathway
C    04340 Hedgehog signaling pathway
C    04341 Hedgehog signaling pathway - fly
C    04350 TGF-beta signaling pathway
C    04390 Hippo signaling pathway
C    04391 Hippo signaling pathway - fly
C    04392 Hippo signaling pathway - multiple species
C    04370 VEGF signaling pathway
C    04371 Apelin signaling pathway
C    04630 JAK-STAT signaling pathway
C    04064 NF-kappa B signaling pathway
C    04668 TNF signaling pathway
C    04066 HIF-1 signaling pathway
C    04068 FoxO signaling pathway
C    04020 Calcium signaling pathway
C    04070 Phosphatidylinositol signaling system
C    04072 Phospholipase D signaling pathway
C    04071 Sphingolipid signaling pathway
C    04024 cAMP signaling pathway
C    04022 cGMP-PKG signaling pathway
C    04151 PI3K-Akt signaling pathway
C    04152 AMPK signaling pathway
C    04150 mTOR signaling pathway
C    04075 Plant hormone signal transduction
B
B  09133 Signaling molecules and interaction
C    04080 Neuroactive ligand-receptor interaction
C    04060 Cytokine-cytokine receptor interaction
C    04061 Viral protein interaction with cytokine and cytokine receptor
C    04512 ECM-receptor interaction
C    04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B  09141 Transport and catabolism
C    04144 Endocytosis
C    04145 Phagosome
C    04142 Lysosome
C    04146 Peroxisome
C    04140 Autophagy - animal
C    04138 Autophagy - yeast
C    04136 Autophagy - other
C    04137 Mitophagy - animal
C    04139 Mitophagy - yeast
C    04148 Efferocytosis [PATH:apet04148]
D      ToN1_41540 Arginase	K01476 rocF; arginase [EC:3.5.3.1]
D      ToN1_33560 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit	K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B  09143 Cell growth and death
C    04110 Cell cycle
C    04111 Cell cycle - yeast
C    04112 Cell cycle - Caulobacter
C    04113 Meiosis - yeast
C    04114 Oocyte meiosis
C    04210 Apoptosis
C    04214 Apoptosis - fly
C    04215 Apoptosis - multiple species
C    04216 Ferroptosis
C    04217 Necroptosis
C    04115 p53 signaling pathway
C    04218 Cellular senescence
B
B  09144 Cellular community - eukaryotes
C    04510 Focal adhesion
C    04520 Adherens junction
C    04530 Tight junction
C    04540 Gap junction
C    04550 Signaling pathways regulating pluripotency of stem cells
B
B  09145 Cellular community - prokaryotes
C    02024 Quorum sensing [PATH:apet02024]
D      ToN1_33230 hfq; RNA-binding protein	K03666 hfq; host factor-I protein
D      ToN1_16510 trpE; Anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      ToN1_16500 trpG; Anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      ToN1_01040 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      ToN1_35550 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      ToN1_35780 Two component system sensor histidine kinase	K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D      ToN1_35760 Two component system response regulator, CheY-like superfamily	K07715 glrR; two-component system, NtrC family, response regulator GlrR
D      ToN1_36290 flhD; Flagellar transcriptional regulator	K02403 flhD; flagellar transcriptional activator FlhD
D      ToN1_36300 flhC; Flagellar transcriptional regulator	K02402 flhC; flagellar transcriptional activator FlhC
D      ToN1_20990 Transcriptional regulator, LuxR family	K20264 fusR; two-component system, NarL family, response regulator FusR
D      ToN1_16600 Extracellular solute-binding protein	K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D      ToN1_50210 Solute-binding domain-containing protein	K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D      ToN1_16620 potB1; Spermidine/putrescine transport system, permease protein	K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D      ToN1_50190 Putative ABC transporter, permease protein	K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D      ToN1_50200 Putative ABC transporter, permease protein	K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D      ToN1_16610 potA1; Spermidine/putrescine import ATP-binding protein	K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D      ToN1_50230 Polyamine ABC transporter, ATP-binding protein	K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D      ToN1_00110 ABC transporter, branched-chain amino acid periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_02370 livB; Amino acid ABC transport system, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_19960 Putative amino acid/amide ABC transporter, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_22250 High-affinity branched-chain amino acid transport system, substrate binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_23150 High-affinity branched-chain amino acid transport system, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_23160 High-affinity branched-chain amino acid transport system, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_23750 Putative amino acid ABC transporter, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_09340 Amino acid/amide ABC transporter, periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_26730 Putative aromatic compound ABC transporter periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_28920 Amino acid/amide ABC transporter, periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_29280 Amino acid ABC transporter periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_40230 Amino acid ABC transporter periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_43990 Amino acid/amide ABC transporter, periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_48950 ABC transporter, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_49260 High-affinity branched-chain amino acid transport system, periplasmic component	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_50450 Leucine-binding domain-containing protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_50460 Leucine-binding domain-containing protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_02360 livH; putative phenylacetate ABC transport system permease protein 1	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_19980 putative ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_22260 High-affinity branched-chain amino acid transport system, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_23170 High-affinity branched-chain amino acid transport system, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_23770 ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_26740 Putative aromatic compound ABC transporter permease protein I	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_28930 Amino acid/amide ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_48940 ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_49270 High-affinity branched-chain amino acid transport system, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_02350 livM; putative phenylacetate ABC transport system permease protein 2	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_19970 putative ABC transporter, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_22270 High-affinity branched-chain amino acid transport system, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_23180 High-affinity branched-chain amino acid transport system, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_23760 ABC transporter, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_26750 Putative aromatic compound ABC transporter permease protein II	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_28940 Amino acid/amide ABC transporter, permease protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_48930 ABC transporter, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_49280 High-affinity branched-chain amino acid transport system, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_02340 livG; putative phenylacetate ABC transporter ATP-binding protein 1	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_19990 Putative branched-chain amino acid ABC transporter, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_22230 High-affinity branched-chain amino acid transport, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_23190 High-affinity branched-chain amino acid transport, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_26760 Putative aromatic compound ABC transporter, ATP binding protein I	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_43110 Putative ABC transporter, permease protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_48920 ABC transporter, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_49290 Putative high-affinity branched-chain amino acid transport, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_02330 livF; putative phenylacetate ABC transporter ATP-binding protein 2	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_19950 putative ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_22240 High-affinity branched-chain amino acid transport, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_23200 High-affinity branched-chain amino acid transport, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_26770 Putative aromatic compound ABC transporter, ATP binding protein II	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_28950 Amino acid/amide ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_43120 Putative ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_48910 ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_49300 High-affinity branched-chain amino acid transport, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_29790 type I secretion C-terminal target domain-containing protein	K20276 bapA; large repetitive protein
D      ToN1_20000 Long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      ToN1_37460 fadD; Long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      ToN1_38580 Two component system response regulator	K13815 rpfG; two-component system, response regulator RpfG
D      ToN1_02290 Transcriptional regulator, Crp/Fnr family	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      ToN1_02300 Cyclic nucleotide-binding domain-containing protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      ToN1_37140 Putative transcriptional regulator, Crp/Fnr family	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      ToN1_06650 ribA; GTP cyclohydrolase II	K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D      ToN1_35400 ribD; Riboflavin biosynthesis protein	K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D      ToN1_18620 RND efflux system outer membrane lipoprotein, NodT family	K18139 oprM; outer membrane protein, multidrug efflux system
D      ToN1_39190 RND efflux system outer membrane lipoprotein, NodT family	K18139 oprM; outer membrane protein, multidrug efflux system
D      ToN1_47780 Putative ABC transporter, periplasmic binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      ToN1_47790 Putative ABC transporter, permease protein	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      ToN1_47800 Putative ABC transporter, permease protein	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      ToN1_00590 putative oligopeptide/dipeptide ABC transporter, ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      ToN1_25360 yidC; Membrane protein insertase	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      ToN1_19790 secE; Protein translocase, subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      ToN1_38040 secG; Protein-export membrane protein	K03075 secG; preprotein translocase subunit SecG
D      ToN1_19460 secY; Protein translocase subunit	K03076 secY; preprotein translocase subunit SecY
D      ToN1_16870 yajC; Preprotein translocase, subunit C	K03210 yajC; preprotein translocase subunit YajC
D      ToN1_16970 secA; Protein translocase, subunit A	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      ToN1_31930 Signal recognition particle receptor FtsY	K03110 ftsY; fused signal recognition particle receptor
D      ToN1_35310 secB; Protein-export protein	K03071 secB; preprotein translocase subunit SecB
D      ToN1_15460 ffh; Signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C    05111 Biofilm formation - Vibrio cholerae
C    02025 Biofilm formation - Pseudomonas aeruginosa
C    02026 Biofilm formation - Escherichia coli
B
B  09142 Cell motility
C    02030 Bacterial chemotaxis [PATH:apet02030]
D      ToN1_03660 Chemotaxis methyl-accepting receptor family protein, Tar-related	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_19030 Chemotaxis methyl-accepting receptor family protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_23370 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_23870 Methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_24000 Methyl-accepting chemotaxis sensory transducer, single cache domain-containing	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_08750 Methyl-accepting chemotaxis protein (MCP)	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_10380 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_27070 Methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_36150 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_38340 putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_40270 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_46990 Methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_43770 rbsB; Ribose ABC transporter, periplasmic ribose-binding protein	K10439 rbsB; ribose transport system substrate-binding protein
D      ToN1_36400 Chemotaxis protein, CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      ToN1_36380 cheY; Chemotaxis protein CheY	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      ToN1_36390 Chemotaxis protein, CheZ	K03414 cheZ; chemotaxis protein CheZ
D      ToN1_36350 Protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      ToN1_36360 Chemotaxis protein CheV-like	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      ToN1_36370 Chemotaxis protein CheV-like	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      ToN1_36340 Chemotaxis receptor methyltransferase	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      ToN1_40050 fliG; Flagellar motor switch protein	K02410 fliG; flagellar motor switch protein FliG
D      ToN1_39990 fliM; Flagellar motor switch protein	K02416 fliM; flagellar motor switch protein FliM
D      ToN1_39980 fliN; Flagellar motor switch protein	K02417 fliN; flagellar motor switch protein FliN
D      ToN1_14790 motA1; Flagellar motor protein A	K02556 motA; chemotaxis protein MotA
D      ToN1_36320 motA2; Flagellar motor protein	K02556 motA; chemotaxis protein MotA
D      ToN1_14780 motB1; Flagellar motor protein B	K02557 motB; chemotaxis protein MotB
D      ToN1_36330 motB2; Flagellar motor protein	K02557 motB; chemotaxis protein MotB
C    02040 Flagellar assembly [PATH:apet02040]
D      ToN1_40090 fliE; Flagellar hook-basal body complex protein	K02408 fliE; flagellar hook-basal body complex protein FliE
D      ToN1_40060 fliF; Flagellar M-ring protein	K02409 fliF; flagellar M-ring protein FliF
D      ToN1_40050 fliG; Flagellar motor switch protein	K02410 fliG; flagellar motor switch protein FliG
D      ToN1_40040 fliH; Flagellar assembly protein FliH	K02411 fliH; flagellar assembly protein FliH
D      ToN1_40030 fliI; Flagellar protein export ATPase	K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D      ToN1_40020 fliJ; Flagellar export protein	K02413 fliJ; flagellar protein FliJ
D      ToN1_40010 Putative flagellar hook-length control protein FliK	K02414 fliK; flagellar hook-length control protein FliK
D      ToN1_40000 fliL; Flagellar protein	K02415 fliL; flagellar protein FliL
D      ToN1_39990 fliM; Flagellar motor switch protein	K02416 fliM; flagellar motor switch protein FliM
D      ToN1_39980 fliN; Flagellar motor switch protein	K02417 fliN; flagellar motor switch protein FliN
D      ToN1_39970 fliO; Flagellar biosynthetic protein	K02418 fliO; flagellar protein FliO/FliZ
D      ToN1_39960 fliP; Flagellar biosynthetic protein	K02419 fliP; flagellar biosynthesis protein FliP
D      ToN1_39950 fliQ; Flagellar biosynthetic protein	K02420 fliQ; flagellar biosynthesis protein FliQ
D      ToN1_39940 fliR; Flagellar biosynthetic protein	K02421 fliR; flagellar biosynthesis protein FliR
D      ToN1_14830 flhA; Flagellar biosynthetis protein	K02400 flhA; flagellar biosynthesis protein FlhA
D      ToN1_14840 flhB; Flagellar biosynthetis protein	K02401 flhB; flagellar biosynthesis protein FlhB
D      ToN1_39810 flgA; Flagella basal body P-ring formation protein FlgA	K02386 flgA; flagellar basal body P-ring formation protein FlgA
D      ToN1_39820 flgB; Flagellar basal body rod protein	K02387 flgB; flagellar basal-body rod protein FlgB
D      ToN1_39830 flgC; Flagellar basal-body rod protein	K02388 flgC; flagellar basal-body rod protein FlgC
D      ToN1_39840 flgD; Flagellar basal-body rod protein	K02389 flgD; flagellar basal-body rod modification protein FlgD
D      ToN1_39850 flgE; Flagellar basal-body rod protein	K02390 flgE; flagellar hook protein FlgE
D      ToN1_39860 flgF; Flagellar basal-body rod protein	K02391 flgF; flagellar basal-body rod protein FlgF
D      ToN1_39870 flgG; Flagellar basal-body rod protein	K02392 flgG; flagellar basal-body rod protein FlgG
D      ToN1_39880 flgH; Flagellar L-ring protein	K02393 flgH; flagellar L-ring protein FlgH
D      ToN1_39890 flgI; Flagellar P-ring protein	K02394 flgI; flagellar P-ring protein FlgI
D      ToN1_39900 flgJ; Flagellar rod assembly protein	K02395 flgJ; peptidoglycan hydrolase FlgJ
D      ToN1_39910 flgK; Flagellar hook-associated protein 1	K02396 flgK; flagellar hook-associated protein 1
D      ToN1_39920 flgL; Flagellar hook-associated protein 3	K02397 flgL; flagellar hook-associated protein 3 FlgL
D      ToN1_40170 Flagellin domain-containing protein	K02406 fliC; flagellin
D      ToN1_40150 fliD; Flagellar hook-associated protein 2	K02407 fliD; flagellar hook-associated protein 2
D      ToN1_40140 fliS; Flagellar secretion chaperone	K02422 fliS; flagellar secretion chaperone FliS
D      ToN1_40130 fliT; Flagellar protein	K02423 fliT; flagellar protein FliT
D      ToN1_14790 motA1; Flagellar motor protein A	K02556 motA; chemotaxis protein MotA
D      ToN1_36320 motA2; Flagellar motor protein	K02556 motA; chemotaxis protein MotA
D      ToN1_14780 motB1; Flagellar motor protein B	K02557 motB; chemotaxis protein MotB
D      ToN1_36330 motB2; Flagellar motor protein	K02557 motB; chemotaxis protein MotB
D      ToN1_39800 Anti-sigma-28 factor, FlgM family	K02398 flgM; negative regulator of flagellin synthesis FlgM
D      ToN1_39790 Putative chaperon of flagellar synthesis	K02399 flgN; flagellar biosynthesis protein FlgN
D      ToN1_10660 rpoD; RNA polymerase sigma factor	K03086 rpoD; RNA polymerase primary sigma factor
D      ToN1_36290 flhD; Flagellar transcriptional regulator	K02403 flhD; flagellar transcriptional activator FlhD
D      ToN1_36300 flhC; Flagellar transcriptional regulator	K02402 flhC; flagellar transcriptional activator FlhC
D      ToN1_22350 rpoN; RNA polymerase sigma-54 factor	K03092 rpoN; RNA polymerase sigma-54 factor
D      ToN1_40080 Two component system response regulator, CheY-like superfamily	K10943 flrC; two-component system, response regulator FlrC
D      ToN1_14800 fliA; RNA polymerase sigma factor	K02405 fliA; RNA polymerase sigma factor FliA
C    04814 Motor proteins
C    04820 Cytoskeleton in muscle cells [PATH:apet04820]
D      ToN1_09380 Cation-transporting P-type ATPase	K01539 ATP1A; sodium/potassium-transporting ATPase subunit alpha [EC:7.2.2.13]
D      ToN1_43420 eno1; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_46510 eno2; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C    04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B  09151 Immune system
C    04640 Hematopoietic cell lineage
C    04610 Complement and coagulation cascades
C    04611 Platelet activation
C    04613 Neutrophil extracellular trap formation
C    04620 Toll-like receptor signaling pathway
C    04624 Toll and Imd signaling pathway
C    04621 NOD-like receptor signaling pathway
C    04622 RIG-I-like receptor signaling pathway
C    04623 Cytosolic DNA-sensing pathway
C    04625 C-type lectin receptor signaling pathway
C    04650 Natural killer cell mediated cytotoxicity
C    04612 Antigen processing and presentation
C    04660 T cell receptor signaling pathway
C    04658 Th1 and Th2 cell differentiation
C    04659 Th17 cell differentiation
C    04657 IL-17 signaling pathway
C    04662 B cell receptor signaling pathway
C    04664 Fc epsilon RI signaling pathway
C    04666 Fc gamma R-mediated phagocytosis
C    04670 Leukocyte transendothelial migration
C    04672 Intestinal immune network for IgA production
C    04062 Chemokine signaling pathway
B
B  09152 Endocrine system
C    04911 Insulin secretion
C    04910 Insulin signaling pathway
C    04922 Glucagon signaling pathway
C    04923 Regulation of lipolysis in adipocytes
C    04920 Adipocytokine signaling pathway
C    03320 PPAR signaling pathway
C    04929 GnRH secretion
C    04912 GnRH signaling pathway
C    04913 Ovarian steroidogenesis
C    04915 Estrogen signaling pathway
C    04914 Progesterone-mediated oocyte maturation
C    04917 Prolactin signaling pathway
C    04921 Oxytocin signaling pathway
C    04926 Relaxin signaling pathway
C    04935 Growth hormone synthesis, secretion and action
C    04918 Thyroid hormone synthesis
C    04919 Thyroid hormone signaling pathway
C    04928 Parathyroid hormone synthesis, secretion and action
C    04916 Melanogenesis
C    04924 Renin secretion
C    04614 Renin-angiotensin system
C    04925 Aldosterone synthesis and secretion
C    04927 Cortisol synthesis and secretion
B
B  09153 Circulatory system
C    04260 Cardiac muscle contraction
C    04261 Adrenergic signaling in cardiomyocytes
C    04270 Vascular smooth muscle contraction
B
B  09154 Digestive system
C    04970 Salivary secretion
C    04971 Gastric acid secretion
C    04972 Pancreatic secretion
C    04976 Bile secretion
C    04973 Carbohydrate digestion and absorption
C    04974 Protein digestion and absorption
C    04975 Fat digestion and absorption
C    04979 Cholesterol metabolism
C    04977 Vitamin digestion and absorption
C    04980 Cobalamin transport and metabolism [PATH:apet04980]
D      ToN1_35560 ATP:cob(I)alamin adenosyltransferase	K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      ToN1_00230 Putative xanthine dehydrogenase accessory protein	K07588 MMAA; GTPase [EC:3.6.5.-]
D      ToN1_20280 Putative transport system kinase	K07588 MMAA; GTPase [EC:3.6.5.-]
D      ToN1_20290 sbmB; Methylmalonyl-CoA mutase, beta subunit	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      ToN1_23030 metH; Methionine synthase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      ToN1_45060 Putative methyltransferase	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C    04978 Mineral absorption
B
B  09155 Excretory system
C    04962 Vasopressin-regulated water reabsorption
C    04960 Aldosterone-regulated sodium reabsorption
C    04961 Endocrine and other factor-regulated calcium reabsorption
C    04964 Proximal tubule bicarbonate reclamation
C    04966 Collecting duct acid secretion
B
B  09156 Nervous system
C    04724 Glutamatergic synapse
C    04727 GABAergic synapse
C    04725 Cholinergic synapse
C    04728 Dopaminergic synapse
C    04726 Serotonergic synapse
C    04720 Long-term potentiation
C    04730 Long-term depression
C    04723 Retrograde endocannabinoid signaling
C    04721 Synaptic vesicle cycle
C    04722 Neurotrophin signaling pathway
B
B  09157 Sensory system
C    04744 Phototransduction
C    04745 Phototransduction - fly
C    04740 Olfactory transduction
C    04742 Taste transduction
C    04750 Inflammatory mediator regulation of TRP channels
B
B  09158 Development and regeneration
C    04320 Dorso-ventral axis formation
C    04360 Axon guidance
C    04361 Axon regeneration
C    04380 Osteoclast differentiation
B
B  09149 Aging
C    04211 Longevity regulating pathway
C    04212 Longevity regulating pathway - worm
C    04213 Longevity regulating pathway - multiple species
B
B  09159 Environmental adaptation
C    04710 Circadian rhythm
C    04713 Circadian entrainment
C    04711 Circadian rhythm - fly
C    04712 Circadian rhythm - plant
C    04714 Thermogenesis
C    04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B  09161 Cancer: overview
C    05200 Pathways in cancer
C    05202 Transcriptional misregulation in cancer
C    05206 MicroRNAs in cancer
C    05205 Proteoglycans in cancer
C    05204 Chemical carcinogenesis - DNA adducts
C    05207 Chemical carcinogenesis - receptor activation
C    05208 Chemical carcinogenesis - reactive oxygen species
C    05203 Viral carcinogenesis
C    05230 Central carbon metabolism in cancer
C    05231 Choline metabolism in cancer
C    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B  09162 Cancer: specific types
C    05210 Colorectal cancer
C    05212 Pancreatic cancer
C    05225 Hepatocellular carcinoma
C    05226 Gastric cancer
C    05214 Glioma
C    05216 Thyroid cancer
C    05221 Acute myeloid leukemia
C    05220 Chronic myeloid leukemia
C    05217 Basal cell carcinoma
C    05218 Melanoma
C    05211 Renal cell carcinoma
C    05219 Bladder cancer
C    05215 Prostate cancer
C    05213 Endometrial cancer
C    05224 Breast cancer
C    05222 Small cell lung cancer
C    05223 Non-small cell lung cancer
B
B  09172 Infectious disease: viral
C    05166 Human T-cell leukemia virus 1 infection
C    05170 Human immunodeficiency virus 1 infection
C    05161 Hepatitis B
C    05160 Hepatitis C
C    05171 Coronavirus disease - COVID-19
C    05164 Influenza A
C    05162 Measles
C    05168 Herpes simplex virus 1 infection
C    05163 Human cytomegalovirus infection
C    05167 Kaposi sarcoma-associated herpesvirus infection
C    05169 Epstein-Barr virus infection
C    05165 Human papillomavirus infection
B
B  09171 Infectious disease: bacterial
C    05110 Vibrio cholerae infection
C    05120 Epithelial cell signaling in Helicobacter pylori infection
C    05130 Pathogenic Escherichia coli infection
C    05132 Salmonella infection
C    05131 Shigellosis
C    05135 Yersinia infection
C    05133 Pertussis
C    05134 Legionellosis
C    05150 Staphylococcus aureus infection
C    05152 Tuberculosis
C    05100 Bacterial invasion of epithelial cells
B
B  09174 Infectious disease: parasitic
C    05146 Amoebiasis
C    05144 Malaria
C    05145 Toxoplasmosis
C    05140 Leishmaniasis
C    05142 Chagas disease
C    05143 African trypanosomiasis
B
B  09163 Immune disease
C    05310 Asthma
C    05322 Systemic lupus erythematosus
C    05323 Rheumatoid arthritis
C    05320 Autoimmune thyroid disease
C    05321 Inflammatory bowel disease
C    05330 Allograft rejection
C    05332 Graft-versus-host disease
C    05340 Primary immunodeficiency
B
B  09164 Neurodegenerative disease
C    05010 Alzheimer disease
C    05012 Parkinson disease
C    05014 Amyotrophic lateral sclerosis
C    05016 Huntington disease
C    05017 Spinocerebellar ataxia
C    05020 Prion disease
C    05022 Pathways of neurodegeneration - multiple diseases
B
B  09165 Substance dependence
C    05030 Cocaine addiction
C    05031 Amphetamine addiction
C    05032 Morphine addiction
C    05033 Nicotine addiction
C    05034 Alcoholism
B
B  09166 Cardiovascular disease
C    05417 Lipid and atherosclerosis
C    05418 Fluid shear stress and atherosclerosis
C    05410 Hypertrophic cardiomyopathy
C    05412 Arrhythmogenic right ventricular cardiomyopathy
C    05414 Dilated cardiomyopathy
C    05415 Diabetic cardiomyopathy
C    05416 Viral myocarditis
B
B  09167 Endocrine and metabolic disease
C    04930 Type II diabetes mellitus
C    04940 Type I diabetes mellitus
C    04950 Maturity onset diabetes of the young
C    04936 Alcoholic liver disease
C    04932 Non-alcoholic fatty liver disease
C    04931 Insulin resistance
C    04933 AGE-RAGE signaling pathway in diabetic complications
C    04934 Cushing syndrome
B
B  09175 Drug resistance: antimicrobial
C    01501 beta-Lactam resistance [PATH:apet01501]
D      ToN1_26430 Putative muropeptide transporter	K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D      ToN1_09830 nagZ; Beta-hexosaminidase	K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D      ToN1_14080 RND efflux system, membrane fusion protein	K03585 acrA; membrane fusion protein, multidrug efflux system
D      ToN1_39170 RND efflux system, MFP subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      ToN1_14070 Multidrug efflux transporter	K18138 acrB; multidrug efflux pump
D      ToN1_39180 Efflux pump membrane transporter	K18138 acrB; multidrug efflux pump
D      ToN1_18620 RND efflux system outer membrane lipoprotein, NodT family	K18139 oprM; outer membrane protein, multidrug efflux system
D      ToN1_39190 RND efflux system outer membrane lipoprotein, NodT family	K18139 oprM; outer membrane protein, multidrug efflux system
D      ToN1_17570 Type I secretion outer membrane protein, TolC family	K12340 tolC; outer membrane protein
D      ToN1_21410 mrcA; Penicillin-binding protein 1A	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      ToN1_24270 mrdA; cell elongation-specific peptidoglycan D,D-transpeptidase/peptidoglycan glycosyltransferase	K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D      ToN1_17130 ftsI; Peptidoglycan D,D-transpeptidase	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C    01502 Vancomycin resistance [PATH:apet01502]
D      ToN1_17050 ddl; D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      ToN1_28640 alr; Alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      ToN1_17110 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D      ToN1_17100 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      ToN1_17070 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C    01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:apet01503]
D      ToN1_27260 Hemolysin-type calcium-binding repeat domain-containing protein	K01406 prtC; serralysin [EC:3.4.24.40]
D      ToN1_27270 Hemolysin-type calcium-binding repeat domain-containing protein	K01406 prtC; serralysin [EC:3.4.24.40]
D      ToN1_33360 Hemolysin-type calcium-binding repeat-containing protein	K01406 prtC; serralysin [EC:3.4.24.40]
D      ToN1_46570 Peptidase, M10 family	K01406 prtC; serralysin [EC:3.4.24.40]
D      ToN1_22840 Putative N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      ToN1_11410 N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      ToN1_13950 putative periplasmic serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_09930 Putative periplasmic serine endoprotease, DegP-like	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_24930 putative periplasmic serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_29760 dsbA; Thiol:disulfide interchange protein	K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D      ToN1_37740 ppiA; Peptidyl-prolyl cis-trans isomerase A	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      ToN1_14080 RND efflux system, membrane fusion protein	K03585 acrA; membrane fusion protein, multidrug efflux system
D      ToN1_39170 RND efflux system, MFP subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      ToN1_14070 Multidrug efflux transporter	K18138 acrB; multidrug efflux pump
D      ToN1_39180 Efflux pump membrane transporter	K18138 acrB; multidrug efflux pump
D      ToN1_17570 Type I secretion outer membrane protein, TolC family	K12340 tolC; outer membrane protein
D      ToN1_01170 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B  09176 Drug resistance: antineoplastic
C    01521 EGFR tyrosine kinase inhibitor resistance
C    01524 Platinum drug resistance
C    01523 Antifolate resistance
C    01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B  09181 Protein families: metabolism
C    01000 Enzymes [BR:apet01000]
C    01001 Protein kinases [BR:apet01001]
D      ToN1_02700 Protein kinase, RIO-type	K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D      ToN1_37810 Putative serine/threonine-protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      ToN1_34720 putative exopolysaccharide biosynthesis protein	K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D      ToN1_16030 AAA domain-containing protein	K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D      ToN1_24370 phoR; Phosphate regulon sensor protein	K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D      ToN1_45870 Two component system sensor histidine kinase	K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D      ToN1_18820 Two component system sensor histidine kinase	K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D      ToN1_25610 Two component system sensor histidine kinase	K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D      ToN1_13940 qseC; Two component system sensor histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      ToN1_00870 narQ; Nitrate/nitrite sensor protein	K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D      ToN1_27750 narX; Nitrate/nitrite sensor histidine kinase	K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D      ToN1_21000 Histidine kinase	K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D      ToN1_41060 Two component system sensor histidine kinase	K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D      ToN1_49330 Two component system sensor histidine kinase	K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D      ToN1_36790 Putative two component system sensor histidine kinase	K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D      ToN1_31590 ntrB; Nitrogen assimilation sensor kinase	K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D      ToN1_25420 Two component system sensor histidine kinase	K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D      ToN1_08580 Two component system sensor histidine kinase	K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D      ToN1_27330 Two component system sensor histidine kinase	K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D      ToN1_18930 Two component system sensor histidine kinase	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      ToN1_35780 Two component system sensor histidine kinase	K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D      ToN1_25890 Two component system, sensor histidine kinase	K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D      ToN1_22180 Two component system sensor histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_24820 Two component system sensor histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_27980 Two component system sensor histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_33880 Putative two component system histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_33940 Putative two component system histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_33960 Putative two component system histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_33980 Putative two component system histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_42230 Two component system sensor histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_48310 Putative two component system sensor histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_48360 Putative response regulator receiver modulated diguanylate cyclase/phosphodiesterase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_48380 Putative signal transduction histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_48410 Signal transduction histidine kinase, PAS domain-containing	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_36400 Chemotaxis protein, CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      ToN1_17990 pilL; Type IV pilus hybrid sensor kinase/response regulator	K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D      ToN1_16750 dctS; Two component system sensor histidine kinase	K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D      ToN1_24110 Two component system histidine kinase	K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D      ToN1_28980 Two component system sensor histidine kinase	K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D      ToN1_40070 Two component system sensor histidine kinase	K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D      ToN1_00910 Putative two component system sensory histidine kinase	K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D      ToN1_19900 Two component system fusion protein (sensory histidine kinase and response regulator, CheY-like)	K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D      ToN1_24060 Two component system fusion protein (sensory histidine kinase and response regulator)	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D      ToN1_33060 Two component system fusion protein (sensory histidine kinase and response regulator)	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D      ToN1_33840 Putative two component system histidine kinase	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D      ToN1_33850 Two component system fusion protein (sensory histidine kinase and response regulator)	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D      ToN1_44000 Two component system fusion protein (sensory histidine kinase and response regulator)	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D      ToN1_47330 Putative two component system sensor histidine kinase	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C    01009 Protein phosphatases and associated proteins [BR:apet01009]
D      ToN1_30360 ahcY; Adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      ToN1_47270 htpG; Chaperone protein	K04079 HSP90A; molecular chaperone HtpG
D      ToN1_16570 Putative phosphoprotein phosphatase	K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D      ToN1_23560 Serine/threonine protein phosphatase	K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D      ToN1_11690 Serine/threonine protein phosphatase	K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D      ToN1_01050 putative phosphoserine phosphatase	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C    01002 Peptidases and inhibitors [BR:apet01002]
D      ToN1_11440 lpsA; Lipoprotein signal peptidase	K03101 lspA; signal peptidase II [EC:3.4.23.36]
D      ToN1_15500 pilD; Type IV prepilin-like proteins leader peptide-processing enzyme	K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D      ToN1_20400 Type IV prepilin peptidase	K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D      ToN1_25740 hybD; Hydrogenase 2 maturation protease	K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D      ToN1_40820 Caspase-like superfamily protein	K22684 MCA1; metacaspase-1 [EC:3.4.22.-]
D      ToN1_47870 guaA; GMP synthase (glutamine-hydrolyzing)	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      ToN1_13380 Putative glutamine amidotransferase	K07010 K07010; putative glutamine amidotransferase
D      ToN1_37700 purF; Amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D      ToN1_21310 gltA1; Glutamate synthase [NADPH] large subunit	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      ToN1_21260 glmS; Glutamine--fructose-6-phosphate aminotransferase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      ToN1_15880 Asparagine synthase	K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D      ToN1_15960 Asparagine synthase, exosortase system type 1 associated	K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D      ToN1_38890 asnB; Asparagine synthetase	K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D      ToN1_46910 L,D-transpeptidase catalytic domain-containing protein	K21470 ycbB; L,D-transpeptidase YcbB
D      ToN1_14200 pepN; Aminopeptidase N	K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D      ToN1_34880 Peptidase, M3 family	K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D      ToN1_27260 Hemolysin-type calcium-binding repeat domain-containing protein	K01406 prtC; serralysin [EC:3.4.24.40]
D      ToN1_27270 Hemolysin-type calcium-binding repeat domain-containing protein	K01406 prtC; serralysin [EC:3.4.24.40]
D      ToN1_33360 Hemolysin-type calcium-binding repeat-containing protein	K01406 prtC; serralysin [EC:3.4.24.40]
D      ToN1_46570 Peptidase, M10 family	K01406 prtC; serralysin [EC:3.4.24.40]
D      ToN1_15350 Putative peptidase	K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D      ToN1_31910 Peptidase, M16 family	K07263 pqqL; zinc protease [EC:3.4.24.-]
D      ToN1_31920 Zn-dependent peptidase, M16 family	K07263 pqqL; zinc protease [EC:3.4.24.-]
D      ToN1_42040 pepA; putative cytosol aminopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      ToN1_44470 Peptidase, M19 family	K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D      ToN1_09630 dapE; Succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      ToN1_46030 Peptidase, M20 family	K01270 pepD; dipeptidase D [EC:3.4.13.-]
D      ToN1_42430 Amidohydrolase	K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D      ToN1_01300 map1; Methionine aminopeptidase	K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D      ToN1_48000 map2; Methionine aminopeptidase	K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D      ToN1_34550 X-Pro aminopeptidase	K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D      ToN1_27020 Putative ATPase, AAA-type	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      ToN1_37960 ftsH; ATP-dependent zinc metalloprotease	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      ToN1_38690 M48 family peptidase	K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D      ToN1_24830 htpX; Protease HtpX-like	K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D      ToN1_20240 Peptidase family M48	K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D      ToN1_41980 putative peptidase, M48 family	K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D      ToN1_01220 Putative membrane-associated zinc metalloprotease	K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D      ToN1_45660 Putative metallopeptidase, MtfA family	K09933 mtfA; MtfA peptidase
D      ToN1_13950 putative periplasmic serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_09930 Putative periplasmic serine endoprotease, DegP-like	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_24930 putative periplasmic serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_32980 putative periplasmic serine endoprotease, DegP/HtrA/Do family	K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D      ToN1_24240 dacC; D-alanyl-D-alanine carboxypeptidase	K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D      ToN1_31220 pbp; D-alanyl-D-alanine carboxypeptidase	K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D      ToN1_21490 D-alanyl-D-alanine carboxypeptidase	K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D      ToN1_39080 clpP; ATP-dependent Clp protease proteolytic subunit	K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D      ToN1_39100 lon; Lon protease	K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D      ToN1_00630 lexA; LexA repressor	K01356 lexA; repressor LexA [EC:3.4.21.88]
D      ToN1_09900 lepB; Signal peptidase I	K03100 lepB; signal peptidase I [EC:3.4.21.89]
D      ToN1_43540 pip; Proline iminopeptidase	K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D      ToN1_35370 ctpA; Carboxyl-terminal-processing protease	K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D      ToN1_23600 Protease IV	K04773 sppA; protease IV [EC:3.4.21.-]
D      ToN1_22070 hslV; ATP-dependent protease, subunit V	K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D      ToN1_36600 ggt; Gamma-glutamyltranspeptidase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      ToN1_23240 Putative protease	K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D      ToN1_23270 Putative protease, U32 family	K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D      ToN1_23280 Putative protease, U32 family	K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D      ToN1_26600 Putative protease, U32 family	K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D      ToN1_38490 putative peptidase, U32 family	K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D      ToN1_29800 Putative protease, U32 family	K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D      ToN1_29570 Peptidase, U32 family	K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D      ToN1_01810 Peptidase, U32 family	K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D      ToN1_23260 Putative protease, U32 family	K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D      ToN1_29580 Peptidase, U32 family	K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D      ToN1_35480 pmbA; Metalloprotease	K03592 pmbA; PmbA protein
D      ToN1_35740 tldD; Metalloprotease	K03568 tldD; TldD protein
D      ToN1_24640 Uncharacterized protein	K06894 yfhM; alpha-2-macroglobulin
D      ToN1_33260 hflC; Protein HflKC	K04087 hflC; modulator of FtsH protease HflC
D      ToN1_33250 hflK; Protein HflKC	K04088 hflK; modulator of FtsH protease HflK
C    01003 Glycosyltransferases [BR:apet01003]
D      ToN1_15770 Glycosyl transferase, family 2	K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356]
D      ToN1_28460 Glycosyltransferase family protein	K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D      ToN1_28280 Tetratricopeptide repeat domain-containing	K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D      ToN1_28290 Tetratricopeptide repeat domain-containing	K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D      ToN1_28300 Tetratricopeptide repeat domain-containing	K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D      ToN1_15740 Glycosyl transferase, family 1	K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D      ToN1_15830 Glycosyl transferase, family 1	K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D      ToN1_17880 mtgA; Biosynthetic peptidoglycan transglycosylase	K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D      ToN1_24650 pbpC; Penicillin-binding protein 1C	K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D      ToN1_21410 mrcA; Penicillin-binding protein 1A	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      ToN1_34820 Uncharacterized protein	K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
D      ToN1_02060 Glycosyltransferase family 28 protein	K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
C    01005 Lipopolysaccharide biosynthesis proteins [BR:apet01005]
D      ToN1_01170 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D      ToN1_01160 lpxB; Lipid-A-disaccharide synthase	K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D      ToN1_17010 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase	K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D      ToN1_01190 lpxD; UDP-3-O-acylglucosamine N-acyltransferase	K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D      ToN1_46340 PAP2 family protein	K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D      ToN1_37720 lpxH; UDP-2,3-diacylglucosamine hydrolase	K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D      ToN1_36550 lpxK; Tetraacyldisaccharide 4'-kinase	K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D      ToN1_30460 putative lipid A biosynthesis lauroyl acyltransferase	K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D      ToN1_30470 htrB; Lipid A biosynthesis lauroyl acyltransferase	K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D      ToN1_17560 3-deoxy-D-manno-octulosonic acid transferase	K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D      ToN1_22050 Putative lipid A deacylase	K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D      ToN1_46500 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase	K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D      ToN1_36570 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase	K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D      ToN1_32710 kdsD; Arabinose 5-phosphate isomerase	K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D      ToN1_30920 rfaE; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase	K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D      ToN1_16310 Putative cytidyltransferase	K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D      ToN1_30890 waaC; Lipopolysaccharide heptosyltransferase I	K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D      ToN1_30900 waaF; ADP-heptose-LPS heptosyltransferase II	K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D      ToN1_30880 Glucosyltransferase I family protein	K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D      ToN1_30870 Lipopolysaccharide core heptose(I) kinase	K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D      ToN1_17210 gmhA; Phosphoheptose isomerase	K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D      ToN1_32610 gmhB; D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase	K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D      ToN1_30910 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase	K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D      ToN1_17540 Chain length determinant domain-containing protein	K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator)
D      ToN1_31740 Glycosyl transferase, family 2	K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C    01011 Peptidoglycan biosynthesis and degradation proteins [BR:apet01011]
D      ToN1_32820 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      ToN1_22860 murB; UDP-N-acetylenolpyruvoylglucosamine reductase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      ToN1_17060 murC; UDP-N-acetylmuramate--L-alanine ligase	K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D      ToN1_17090 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      ToN1_17120 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      ToN1_17050 ddl; D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      ToN1_28640 alr; Alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      ToN1_11380 murI; Glutamate racemase	K01776 murI; glutamate racemase [EC:5.1.1.3]
D      ToN1_17100 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      ToN1_17070 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D      ToN1_17810 uppP; Undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      ToN1_36620 murJ; Lipid II flippase	K03980 murJ; putative peptidoglycan lipid II flippase
D      ToN1_21410 mrcA; Penicillin-binding protein 1A	K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D      ToN1_24650 pbpC; Penicillin-binding protein 1C	K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D      ToN1_24270 mrdA; cell elongation-specific peptidoglycan D,D-transpeptidase/peptidoglycan glycosyltransferase	K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D      ToN1_17130 ftsI; Peptidoglycan D,D-transpeptidase	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      ToN1_24240 dacC; D-alanyl-D-alanine carboxypeptidase	K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D      ToN1_21490 D-alanyl-D-alanine carboxypeptidase	K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D      ToN1_31220 pbp; D-alanyl-D-alanine carboxypeptidase	K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D      ToN1_17880 mtgA; Biosynthetic peptidoglycan transglycosylase	K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D      ToN1_46910 L,D-transpeptidase catalytic domain-containing protein	K21470 ycbB; L,D-transpeptidase YcbB
D      ToN1_15350 Putative peptidase	K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D      ToN1_22410 Putative lytic transglycosylase	K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D      ToN1_31470 Membrane-bound lytic murein transglycosylase A	K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D      ToN1_14960 mltB; Membrane-bound lytic transglycosylase	K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D      ToN1_00580 Putative transglycosylase, lysozym-like	K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D      ToN1_37200 Peptidoglycan lytic exotransglycosylase	K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D      ToN1_39700 mltG; Endolytic murein transglycosylase	K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D      ToN1_24250 rlpA; Endolytic peptidoglycan transglycosylase	K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D      ToN1_22840 Putative N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      ToN1_11410 N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      ToN1_31160 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase	K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C    01004 Lipid biosynthesis proteins [BR:apet01004]
D      ToN1_10030 fabD1; Malonyl-CoA-acyl carrier protein transacylase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      ToN1_10040 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III	K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D      ToN1_47170 putative 3-oxoacyl-[acyl carrier protein] synthase	K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D      ToN1_10000 fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      ToN1_47980 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      ToN1_49990 fabF2; 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      ToN1_05910 NAD(P)-binding domain superfamily protein	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_06080 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_06530 Putative 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_10020 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_47140 Short-chain dehydrogenase/reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_48970 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      ToN1_01180 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      ToN1_47220 FabA-like domain-containing protein	K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D      ToN1_47770 fabI1; Enoyl-[acyl-carrier-protein] reductase (NADH)	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      ToN1_49560 fabI2; Enoyl-[acyl-carrier-protein] reductase (NADH)	K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D      ToN1_08540 SGNH hydrolase-type esterase domain-containing protein	K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D      ToN1_04790 Acyl-CoA thioesterase	K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D      ToN1_21750 Acyl-CoA thioesterase	K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D      ToN1_19180 AMP-dependent synthetase/ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_33490 Putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_40720 putative acetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_44310 acsA4; Acetoacetyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      ToN1_11980 prpE; Propionate--CoA ligase	K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D      ToN1_07350 acsA1; Acetoacetyl-CoA synthetase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      ToN1_36250 acsA2; Acetoacetyl-CoA synthetase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      ToN1_43950 acsA3; Acetoacetyl-CoA synthetase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      ToN1_05630 CoA-binding domain-containing protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      ToN1_32180 CoA-binding domain-containing protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      ToN1_20000 Long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      ToN1_37460 fadD; Long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      ToN1_36230 Acyl-CoA synthetase	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D      ToN1_10050 plsX; Phosphate acyltransferase	K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D      ToN1_10610 plsY; Glycerol-3-phosphate acyltransferase	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      ToN1_17360 Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      ToN1_32620 Putative phospholipid/glycerol acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C    01008 Polyketide biosynthesis proteins
C    01006 Prenyltransferases [BR:apet01006]
D      ToN1_11510 putative farnesyl diphosphate synthase	K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D      ToN1_11570 ispB; Octaprenyl-diphosphate synthase	K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D      ToN1_01250 uppS; Isoprenyl transferase	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D      ToN1_08510 hpnD; Squalene synthase	K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D      ToN1_14050 miaA; tRNA dimethylallyltransferase	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D      ToN1_30560 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase	K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D      ToN1_21540 ubiA; 4-hydroxybenzoate octaprenyltransferase	K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D      ToN1_16110 ctaB; Protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
C    01007 Amino acid related enzymes [BR:apet01007]
D      ToN1_49140 gltX; Glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      ToN1_31300 glnS; Glutamine-tRNA ligase	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D      ToN1_31700 gluQ; Glutamyl-Q tRNA(Asp) synthetase	K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D      ToN1_34240 tyrS1; Tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      ToN1_35990 tyrS2; Tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      ToN1_08280 trpS; Tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      ToN1_37770 cysS; Cysteine-tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      ToN1_29740 argS; Arginine-tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      ToN1_10320 metG; Methionine-tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      ToN1_11430 ileS; Isoleucine-tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      ToN1_42010 valS; Valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      ToN1_10500 leuS; Leucine-tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      ToN1_08760 lysS; Lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      ToN1_15530 aspS; Aspartate-tRNA(Asp/Asn) ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      ToN1_33190 hisS; Histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      ToN1_32590 glyQ; Glycine--tRNA ligase, alpha subunit	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D      ToN1_32600 glyS; Glycine--tRNA ligase, beta subunit	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D      ToN1_37190 serS; Serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      ToN1_35820 proS; Proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      ToN1_15080 thrS; Threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      ToN1_35580 alaS; Alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      ToN1_15040 pheS; Phenylalanine--tRNA ligase, alpha subunit	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      ToN1_15030 pheT; Phenylalanine--tRNA ligase, beta subunit	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      ToN1_38960 alaA; Glutamate-pyruvate aminotransferase	K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D      ToN1_10160 aspC; Aspartate aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_33760 pat; Aromatic-amino-acid aminotransferase	K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D      ToN1_18950 putative methionine aminotransferase	K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D      ToN1_09600 dapL; Succinyldiaminopimelate transaminase	K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D      ToN1_23290 hisC1; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_32860 hisC2; Histidinol-phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      ToN1_01090 bioF; 8-amino-7-oxononanoate synthase	K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D      ToN1_19140 putative pyridoxal phosphate-dependent aminotransferase	K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D      ToN1_29070 Aminotransferase class-III	K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D      ToN1_29720 rocD; Ornithine--oxo-acid transaminase	K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D      ToN1_36650 argD; Acetylornithine aminotransferase	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      ToN1_01080 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D      ToN1_17910 hemL; Glutamate-1-semialdehyde 2,1-aminomutase	K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D      ToN1_24230 Putative D-alanine aminotransferase	K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D      ToN1_35620 ilvE; Branched-chain-amino-acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      ToN1_00720 Putative aminodeoxychorismate synthase component I	K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D      ToN1_49880 Para-aminobenzoate synthase, component I	K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D      ToN1_15290 serC; Phosphoserine aminotransferase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      ToN1_28600 Aminotransferase family protein	K13010 per; perosamine synthetase [EC:2.6.1.102]
C    00199 Cytochrome P450 [BR:apet00199]
C    00194 Photosynthesis proteins [BR:apet00194]
D      ToN1_27950 Cytochrome c, class I	K08906 petJ; cytochrome c6
D      ToN1_24430 atpC; ATP synthase, epsilon subunit	K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D      ToN1_24440 atpD; ATP synthase, beta subunit	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      ToN1_24450 atpG; ATP synthase, gamma subunit	K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D      ToN1_24460 atpA; ATP synthase, alpha subunit	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      ToN1_24470 atpH; ATP synthase, delta subunit	K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D      ToN1_24480 atpF; ATP synthase, subunit b	K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D      ToN1_24490 atpE; ATP synthase, subunit c	K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D      ToN1_24500 atpB; ATP synthase, subunit a	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      ToN1_24510 atpI; ATP synthase protein I	K02116 atpI; ATP synthase protein I
B
B  09182 Protein families: genetic information processing
C    03000 Transcription factors [BR:apet03000]
D      ToN1_01830 Putative transcriptional regulator, AraC family	K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D      ToN1_04050 Putative transcriptional regulator, AraC family	K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D      ToN1_38350 Transcriptional regulator, AraC family	K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D      ToN1_46050 Bifunctional transcriptional regulator, AraC family	K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D      ToN1_41160 Transcriptional regulator, AraC family	K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D      ToN1_44460 Transcriptional regulator, AraC family	K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D      ToN1_44600 Transcriptional regulator, AraC family	K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D      ToN1_44680 Transcriptional regulator, AraC family	K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D      ToN1_44830 Transcriptional regulator, AraC family	K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D      ToN1_50110 Transcriptional regulator, AraC family	K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D      ToN1_50240 Transcriptional regulator, AraC family	K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D      ToN1_02030 Transcriptional regulator, LysR family	K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D      ToN1_20800 Transcriptional regulator, LysR family	K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D      ToN1_11300 Transcriptional regulator, LysR family	K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D      ToN1_31050 Transcriptional regulator, LysR family	K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D      ToN1_31140 Transcriptional regulator, LysR family	K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D      ToN1_32060 Transcriptional regulator, LysR family	K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D      ToN1_43010 Transcriptional regulator, LysR family	K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D      ToN1_24910 Transcriptional regulator, LysR family	K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D      ToN1_13540 Transcriptional regulator, LysR family	K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D      ToN1_21920 Transcriptional regulator, LysR-type	K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D      ToN1_36440 Transcriptional regulator, LysR-type	K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D      ToN1_04170 Transcriptional regulator, LysR family	K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D      ToN1_25580 Transcriptional regulator, LysR family	K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D      ToN1_42440 Transcriptional regulator, LysR family	K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D      ToN1_04600 Transcriptional regulator, LysR family	K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D      ToN1_38510 Transcriptional regulator, LysR family	K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D      ToN1_29080 Transcriptional regulator, LysR family	K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D      ToN1_02790 cbbR; Transcriptional regulator, LysR family	K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D      ToN1_21810 Transcriptional regulator, LysR family	K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D      ToN1_44060 Transcriptional regulator, LacI family	K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D      ToN1_36030 Transcriptional regulator, GntR family	K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D      ToN1_47570 Transcriptional regulator, GntR family	K03710 K03710; GntR family transcriptional regulator
D      ToN1_11740 Transcriptional regulator, GntR family	K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D      ToN1_13410 Transcriptional regulator, GntR family	K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D      ToN1_44900 betI; HTH-type transcriptional regulator	K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D      ToN1_45970 Transcriptional regulator, TetR family	K05501 slmA; TetR/AcrR family transcriptional regulator
D      ToN1_13450 acuR; Transcriptional regulator, TetR family	K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D      ToN1_50310 Transcriptional regulator, TetR-like	K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D      ToN1_13100 Transcriptional regulator, AsnC family	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      ToN1_28660 Transcriptional regulator, AsnC family	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      ToN1_33630 Transcriptional regulator, AsnC family	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      ToN1_46890 Transcriptional regulator, AsnC family	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      ToN1_03280 Putative transcriptional regulator, LuxR family	K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D      ToN1_03790 Putative transcriptional regulator, LuxR family	K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D      ToN1_07110 Putative transcriptional regulatory protein, LuxR family	K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D      ToN1_50260 Transcriptional regulator, LuxR family	K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D      ToN1_06730 Transcriptional regulator, MarR family	K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D      ToN1_39480 Transcriptional regulatory protein, MarR family	K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D      ToN1_07130 Transcriptional regulator, MarR family	K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D      ToN1_47290 Transcriptional regulator, MarR family	K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D      ToN1_37030 Transcriptional regulatory protein, MerR family	K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D      ToN1_16300 Transcriptional regulator, MerR family	K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D      ToN1_18350 Ferric-uptake regulator family protein	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D      ToN1_37880 fur; Ferric uptake regulation protein	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D      ToN1_13800 Transcriptional regulator, IclR family	K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D      ToN1_02290 Transcriptional regulator, Crp/Fnr family	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      ToN1_02300 Cyclic nucleotide-binding domain-containing protein	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      ToN1_37140 Putative transcriptional regulator, Crp/Fnr family	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      ToN1_34630 Transcriptional regulator	K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D      ToN1_37000 acpR; Anaerobic aromatic central pathway regulator	K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D      ToN1_07520 Winged helix-like DNA-binding domain superfamily protein	K15861 fixK; CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
D      ToN1_27740 Transcriptional regulatory protein, Crp family	K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D      ToN1_36960 Transcriptional regulator, Crp/Fnr family	K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D      ToN1_44170 Transcriptional regulator, crp-fnr family	K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D      ToN1_45290 Transcriptional regulator, crp-fnr family	K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D      ToN1_09740 iscR; HTH-type transcriptional regulator	K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D      ToN1_42090 Transcriptional regulator, Rrf2 family	K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D      ToN1_42170 Transcriptional regulator, ArsR family	K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D      ToN1_26680 boxR; Shikimate kinase	K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D      ToN1_49110 aroK2; Shikimate kinase	K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D      ToN1_13490 Transcriptional regulator, Xre family	K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D      ToN1_00440 Transcriptional regulator protein, PadR family	K10947 K10947; PadR family transcriptional regulator
D      ToN1_43520 Transcriptional regulator, RpiR family	K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D      ToN1_31570 Biotin-acetyl-CoA-carboxylase ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D      ToN1_34510 Putative Fis-like DNA-binding protein	K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D      ToN1_48150 Type II toxin-antitoxin system antitoxin, MqsA family	K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D      ToN1_19150 Transcriptional regulator, sigma-54 dependent	K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D      ToN1_41570 Sigma54-dependent transcriptional regulator	K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D      ToN1_41600 Sigma54-dependent transcriptional regulator	K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D      ToN1_41780 Sigma54-dependent transcriptional regulator	K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D      ToN1_43660 Sigma54-dependent transcriptional regulator	K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D      ToN1_23840 modE; Molybdenum transport system, transcriptional regulator	K02019 modE; molybdate transport system regulatory protein
D      ToN1_23850 Molybdenum-pterin binding domain-containing protein	K02019 modE; molybdate transport system regulatory protein
D      ToN1_33640 putA; Bifunctional protein	K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D      ToN1_00930 nosR1; Nitrous oxide reductase transcription regulator, 4Fe-4S ferredoxin-type domain-containing	K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D      ToN1_45840 Putative transcriptional regualtor, BolA family	K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D      ToN1_24520 putative chromosome partitioning protein, ParB-like	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D      ToN1_37850 hrcA; Heat-inducible transcription repressor	K03705 hrcA; heat-inducible transcriptional repressor
D      ToN1_49700 Transcriptional regulator, TyrR family	K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D      ToN1_39500 paaX; Phenylacetic acid degradation operon negative regulatory protein	K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D      ToN1_20950 Transcription elongation factor, GreA/GreB family	K06140 rnk; regulator of nucleoside diphosphate kinase
D      ToN1_32830 Transcription elongation factor, GreA/GreB family	K06140 rnk; regulator of nucleoside diphosphate kinase
D      ToN1_41200 Transcription elongation factor	K06140 rnk; regulator of nucleoside diphosphate kinase
D      ToN1_18030 Phosphoribosyl transferase domain-containing protein	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D      ToN1_08810 putative phosphoribosyltransferase	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D      ToN1_34300 DNA-binding domain-containing protein	K07733 alpA; prophage regulatory protein
D      ToN1_21160 Transcriptional regulator	K07734 paiB; transcriptional regulator
D      ToN1_18010 putative protein UPF0301	K07735 algH; putative transcriptional regulator
D      ToN1_24190 dksA2; RNA polymerase-binding transcription factor	K06204 dksA; RNA polymerase-binding transcription factor
D      ToN1_08160 dksA1; RNA polymerase-binding transcription factor	K06204 dksA; RNA polymerase-binding transcription factor
D      ToN1_35410 nrdR; Transcriptional repressor	K07738 nrdR; transcriptional repressor NrdR
D      ToN1_17160 mraZ; Transcriptional regulator	K03925 mraZ; transcriptional regulator MraZ
C    03021 Transcription machinery [BR:apet03021]
D      ToN1_47040 Uncharacterized protein	K03124 TFIIB; transcription initiation factor TFIIB
D      ToN1_19410 rpoA; DNA-directed RNA polymerase, alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      ToN1_19730 rpoB; DNA-directed RNA polymerase, beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      ToN1_19720 rpoC; DNA-directed RNA polymerase, beta' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      ToN1_27670 rpoZ; DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D      ToN1_10660 rpoD; RNA polymerase sigma factor	K03086 rpoD; RNA polymerase primary sigma factor
D      ToN1_14970 rpoS; RNA polymerase sigma factor	K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D      ToN1_14240 RNA polymerase sigma factor, sigma-70 family	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      ToN1_02930 fecI; Sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      ToN1_20980 RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      ToN1_09970 rpoE1; ECF RNA polymerase sigma-E factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      ToN1_39150 rpoE2; ECF RNA polymerase sigma-E factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      ToN1_35540 RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      ToN1_16090 rpoH; RNA polymerase sigma factor RpoH	K03089 rpoH; RNA polymerase sigma-32 factor
D      ToN1_22350 rpoN; RNA polymerase sigma-54 factor	K03092 rpoN; RNA polymerase sigma-54 factor
D      ToN1_14800 fliA; RNA polymerase sigma factor	K02405 fliA; RNA polymerase sigma factor FliA
D      ToN1_08230 nusA; Transcription termination/antitermination protein	K02600 nusA; transcription termination/antitermination protein NusA
D      ToN1_29170 nusB; Transcription antitermination protein	K03625 nusB; transcription antitermination protein NusB
D      ToN1_19780 nusG; Transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG
D      ToN1_33590 sspA; Stringent starvation protein A	K03599 sspA; stringent starvation protein A
D      ToN1_33600 sspB; Stringent starvation protein B	K03600 sspB; stringent starvation protein B
D      ToN1_26510 PPM-type phosphatase domain superfamily protein	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D      ToN1_29140 Alpha/beta hydrolase fold-1 domain-containing protein	K19707 rsbQ; sigma-B regulation protein RsbQ
D      ToN1_09960 rseA; Anti sigma-E protein	K03597 rseA; sigma-E factor negative regulatory protein RseA
D      ToN1_09950 rseB; Sigma-E factor regulatory protein	K03598 rseB; sigma-E factor negative regulatory protein RseB
D      ToN1_09940 rseC; Putative Positive regulator of sigma-E	K03803 rseC; sigma-E factor negative regulatory protein RseC
D      ToN1_42640 Putative transcriptional regulator, ResC family	K03803 rseC; sigma-E factor negative regulatory protein RseC
D      ToN1_24190 dksA2; RNA polymerase-binding transcription factor	K06204 dksA; RNA polymerase-binding transcription factor
D      ToN1_08160 dksA1; RNA polymerase-binding transcription factor	K06204 dksA; RNA polymerase-binding transcription factor
D      ToN1_37930 greA; Transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA
D      ToN1_47260 greB; Transcription elongation factor GreB	K04760 greB; transcription elongation factor GreB
D      ToN1_37420 rho; Transcription termination factor Rho	K03628 rho; transcription termination factor Rho
C    03019 Messenger RNA biogenesis [BR:apet03019]
D      ToN1_10120 rne; Ribonuclease E	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      ToN1_30570 rng; Ribonuclease G	K08301 rng; ribonuclease G [EC:3.1.26.-]
D      ToN1_09880 rnc; Ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      ToN1_33300 rnr; Ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      ToN1_15560 Putative guanine-specific ribonuclease	K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D      ToN1_38700 orn; Oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-]
D      ToN1_20620 rhlE2; ATP-dependent RNA helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      ToN1_11620 rhlE1; ATP-dependent RNA helicase	K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D      ToN1_09780 deaD; ATP-dependent RNA helicase	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      ToN1_16350 ATP-dependent DNA helicase protein	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      ToN1_43420 eno1; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_46510 eno2; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_08170 pnp; Polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D      ToN1_37420 rho; Transcription termination factor Rho	K03628 rho; transcription termination factor Rho
D      ToN1_37790 dnaK; Chaperone protein	K04043 dnaK; molecular chaperone DnaK
D      ToN1_40690 dnaK3; Chaperone protein	K04043 dnaK; molecular chaperone DnaK
D      ToN1_34030 groL1; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_40660 groL2; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_41470 groL3; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_33230 hfq; RNA-binding protein	K03666 hfq; host factor-I protein
D      ToN1_45710 ppk; Polyphosphate kinase	K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D      ToN1_14130 pcnB; Poly(A) polymerase I	K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D      ToN1_35840 rppH; RNA pyrophosphohydrolase	K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D      ToN1_11240 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase	K02553 rraA; regulator of ribonuclease activity A
D      ToN1_29960 Nucleotide-binding protein	K06958 rapZ; RNase adapter protein RapZ
D      ToN1_31380 hrpA; ATP-dependent RNA helicase HrpA	K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C    03041 Spliceosome
C    03011 Ribosome [BR:apet03011]
D      ToN1_15250 rpsA; 30S ribosomal protein S1	K02945 RP-S1; small subunit ribosomal protein S1
D      ToN1_01290 rpsB; 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      ToN1_19600 rpsC; 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      ToN1_19420 rpsD; 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      ToN1_19490 rpsE; 30S ribosomal protein S5	K02988 RP-S5; small subunit ribosomal protein S5
D      ToN1_31390 rpsF; 30S ribosomal protein S6	K02990 RP-S6; small subunit ribosomal protein S6
D      ToN1_19700 rpsG; 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      ToN1_19520 rpsH; 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      ToN1_35950 rpsI; 30S ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      ToN1_19670 rpsJ; 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      ToN1_19430 rpsK; 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      ToN1_19710 rpsL; 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      ToN1_19440 rpsM; 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      ToN1_19530 rpsN; 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      ToN1_08190 rpsO; 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      ToN1_14470 rpsP; 30S ribosomal protein S16	K02959 RP-S16; small subunit ribosomal protein S16
D      ToN1_19570 rpsQ; 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      ToN1_31410 rpsR; 30S ribosomal protein S18	K02963 RP-S18; small subunit ribosomal protein S18
D      ToN1_19620 rpsS; 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      ToN1_36630 rpsT; 30S ribosomal protein S20	K02968 RP-S20; small subunit ribosomal protein S20
D      ToN1_10630 rpsU; 30S ribosomal protein S21	K02970 RP-S21; small subunit ribosomal protein S21
D      ToN1_19760 rplA; 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      ToN1_19630 rplB; 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      ToN1_19660 rplC; 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      ToN1_19650 rplD; 50S ribosomal protein L4	K02926 RP-L4; large subunit ribosomal protein L4
D      ToN1_19540 rplE; 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      ToN1_19510 rplF; 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      ToN1_31420 rplI; 50S ribosomal protein L9	K02939 RP-L9; large subunit ribosomal protein L9
D      ToN1_19750 rplJ; 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      ToN1_19770 rplK; 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      ToN1_19740 rplL; 50S ribosomal protein L7/L12	K02935 RP-L7; large subunit ribosomal protein L7/L12
D      ToN1_35940 rplM; 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      ToN1_19560 rplN; 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      ToN1_19470 rplO; 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      ToN1_19590 rplP; 50S ribosomal protein L16	K02878 RP-L16; large subunit ribosomal protein L16
D      ToN1_19390 rplQ; 50S ribosomal protein L17	K02879 RP-L17; large subunit ribosomal protein L17
D      ToN1_19500 rplR; 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      ToN1_14500 rplS; 50S ribosomal protein L19	K02884 RP-L19; large subunit ribosomal protein L19
D      ToN1_15050 rplT; 50S ribosomal protein L20	K02887 RP-L20; large subunit ribosomal protein L20
D      ToN1_11750 rplU; 50S ribosomal protein L21	K02888 RP-L21; large subunit ribosomal protein L21
D      ToN1_19610 rplV; 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      ToN1_19640 rplW; 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      ToN1_19550 rplX; 50S ribosomal protein L24	K02895 RP-L24; large subunit ribosomal protein L24
D      ToN1_11760 rpmA; 50S ribosomal protein L27	K02899 RP-L27; large subunit ribosomal protein L27
D      ToN1_11190 rpmB; 50S ribosomal protein L28	K02902 RP-L28; large subunit ribosomal protein L28
D      ToN1_19580 rpmC; 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      ToN1_19480 rpmD; 50S ribosomal protein L30	K02907 RP-L30; large subunit ribosomal protein L30
D      ToN1_38720 rpmE; 50S ribosomal protein L31	K02909 RP-L31; large subunit ribosomal protein L31
D      ToN1_10060 rpmF; 50S ribosomal protein L32	K02911 RP-L32; large subunit ribosomal protein L32
D      ToN1_11200 rpmG; 50S ribosomal protein L33	K02913 RP-L33; large subunit ribosomal protein L33
D      ToN1_25330 rpmH; 50S ribosomal protein L34	K02914 RP-L34; large subunit ribosomal protein L34
D      ToN1_15060 rpmI; 50S ribosomal protein L35	K02916 RP-L35; large subunit ribosomal protein L35
D      ToN1_31800 rplY; 50S ribosomal protein L25	K02897 RP-L25; large subunit ribosomal protein L25
C    03009 Ribosome biogenesis [BR:apet03009]
D      ToN1_09880 rnc; Ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      ToN1_02700 Protein kinase, RIO-type	K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D      ToN1_38700 orn; Oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-]
D      ToN1_09870 era; GTPase	K03595 era; GTPase
D      ToN1_11770 obg; GTPase	K03979 obgE; GTPase [EC:3.6.5.-]
D      ToN1_24190 dksA2; RNA polymerase-binding transcription factor	K06204 dksA; RNA polymerase-binding transcription factor
D      ToN1_08160 dksA1; RNA polymerase-binding transcription factor	K06204 dksA; RNA polymerase-binding transcription factor
D      ToN1_08230 nusA; Transcription termination/antitermination protein	K02600 nusA; transcription termination/antitermination protein NusA
D      ToN1_29170 nusB; Transcription antitermination protein	K03625 nusB; transcription antitermination protein NusB
D      ToN1_19780 nusG; Transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG
D      ToN1_25050 rsuA; Pseudouridine synthase	K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D      ToN1_34610 rsmA; Ribosomal RNA small subunit methyltransferase A	K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D      ToN1_14590 Putative ribosomal RNA small subunit methyltransferase	K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D      ToN1_25400 rsmB; Ribosomal RNA small subunit methyltransferase B	K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D      ToN1_31900 RNA methyltransferase family protein, RsmD-like	K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D      ToN1_35110 rsmE; Ribosomal RNA small subunit methyltransferase E	K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D      ToN1_24540 rsmG; Ribosomal RNA small subunit methyltransferase G	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D      ToN1_17150 rsmH; Ribosomal RNA small subunit methyltransferase H	K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D      ToN1_17190 rsmI2; Ribosomal RNA small subunit methyltransferase I	K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D      ToN1_10090 rsmI1; Ribosomal RNA small subunit methyltransferase	K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D      ToN1_33310 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase	K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D      ToN1_37950 rlmE; Ribosomal RNA large subunit methyltransferase E	K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D      ToN1_30620 rlmH; Ribosomal RNA large subunit methyltransferase H	K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D      ToN1_30520 rlmL; Ribosomal RNA large subunit methyltransferase I	K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D      ToN1_49620 rlmJ; Ribosomal RNA large subunit methyltransferase J	K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D      ToN1_18120 putative ribosomal RNA large subunit methyltransferase L	K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D      ToN1_11610 rlmM; Ribosomal RNA large subunit methyltransferase M	K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D      ToN1_14020 putative RNA methyltransferase	K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D      ToN1_33150 rlmN; Dual-specificity RNA methyltransferase	K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D      ToN1_14870 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase	K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D      ToN1_31770 rluA; Ribosomal large subunit pseudouridine synthase A	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      ToN1_42140 Pseudouridine synthase A	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      ToN1_08250 rluB; Ribosomal large subunit pseudouridine synthase B	K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D      ToN1_10110 rluC; Ribosomal large subunit pseudouridine synthase C	K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D      ToN1_37310 Ribosomal large subunit pseudouridine synthase D	K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D      ToN1_14860 rluE; Ribosomal large subunit pseudouridine synthase E	K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D      ToN1_31240 ribosomal large subunit pseudouridine synthase F	K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D      ToN1_45910 rimI; [Ribosomal protein S18]-alanine N-acetyltransferase	K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D      ToN1_14480 rimM; Ribosome maturation factor	K02860 rimM; 16S rRNA processing protein RimM
D      ToN1_37380 rimO; Ribosomal protein S12 methylthiotransferase RimO	K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D      ToN1_40890 YcaO domain-containing protein	K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D      ToN1_17290 prmA; Ribosomal protein L11 methyltransferase	K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D      ToN1_09640 prmB; 50S ribosomal protein L3 glutamine methyltransferase	K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D      ToN1_10120 rne; Ribonuclease E	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      ToN1_30570 rng; Ribonuclease G	K08301 rng; ribonuclease G [EC:3.1.26.-]
D      ToN1_18020 Putative pre-16S rRNA nuclease	K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D      ToN1_43360 ATP-dependent RNA helicase	K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D      ToN1_09780 deaD; ATP-dependent RNA helicase	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      ToN1_38680 rsgA; Small ribosomal subunit biogenesis GTPase	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D      ToN1_33220 der; GTPase	K03977 engA; GTPase
D      ToN1_49440 Ribosome biogenesis GTPase	K14540 rbgA; ribosome biogenesis GTPase A
D      ToN1_02660 hflX1; GTPase	K03665 hflX; GTPase
D      ToN1_33240 hflX2; GTPase	K03665 hflX; GTPase
D      ToN1_40330 sua; Threonylcarbamoyl-AMP synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      ToN1_27680 spoT; Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D      ToN1_08210 rbfA; Ribosome-binding factor A	K02834 rbfA; ribosome-binding factor A
D      ToN1_08240 rimP; Ribosome maturation factor	K09748 rimP; ribosome maturation factor RimP
D      ToN1_38790 RNA-binding S4 domain-containing protein	K14761 rlbA; ribosome-associated protein
D      ToN1_30630 rsfS; Ribosomal silencing factor	K09710 ybeB; ribosome-associated protein
D      ToN1_32560 ybeY; Endoribonuclease	K07042 ybeY; probable rRNA maturation factor
D      ToN1_37940 RNA-binding protein	K07574 yhbY; RNA-binding protein
D      ToN1_35490 ribosome-associated	K09889 yjgA; ribosome-associated protein
D      ToN1_22360 Sigma 54 modulation protein	K05808 hpf; ribosome hibernation promoting factor
D      ToN1_31780 ychF; Ribosome-binding ATPase	K06942 ychF; ribosome-binding ATPase
D      ToN1_10070 Large ribosomal RNA subunit accumulation protein	K07040 yceD; DUF177 domain-containing protein
C    03016 Transfer RNA biogenesis [BR:apet03016]
D      ToN1_15560 Putative guanine-specific ribonuclease	K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D      ToN1_22440 cca; Multifunctional Cca protein	K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D      ToN1_40710 rtcB; RNA-splicing ligase	K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D      ToN1_40630 Archease domain-containing protein	K24956 ZBTB8OS; protein archease
D      ToN1_49140 gltX; Glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      ToN1_35820 proS; Proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      ToN1_11430 ileS; Isoleucine-tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      ToN1_10500 leuS; Leucine-tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      ToN1_10320 metG; Methionine-tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      ToN1_31300 glnS; Glutamine-tRNA ligase	K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D      ToN1_29740 argS; Arginine-tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      ToN1_08760 lysS; Lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      ToN1_15530 aspS; Aspartate-tRNA(Asp/Asn) ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      ToN1_35580 alaS; Alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      ToN1_15080 thrS; Threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      ToN1_37190 serS; Serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      ToN1_37770 cysS; Cysteine-tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      ToN1_42010 valS; Valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      ToN1_33190 hisS; Histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      ToN1_15040 pheS; Phenylalanine--tRNA ligase, alpha subunit	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      ToN1_15030 pheT; Phenylalanine--tRNA ligase, beta subunit	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      ToN1_34240 tyrS1; Tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      ToN1_35990 tyrS2; Tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      ToN1_08280 trpS; Tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      ToN1_38610 dtd; D-aminoacyl-tRNA deacylase	K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D      ToN1_17340 Histidine triad (HIT) family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      ToN1_32940 Histidine triad (HIT) family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      ToN1_23610 trmB; tRNA (guanine-N(7)-)-methyltransferase	K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D      ToN1_38740 tRNA (guanine-N7-)-methyltransferase	K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D      ToN1_37620 truA; tRNA pseudouridine synthase A	K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D      ToN1_08200 truB; tRNA pseudouridine synthase B	K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D      ToN1_09720 iscS; Cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      ToN1_09730 Putative cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      ToN1_40330 sua; Threonylcarbamoyl-AMP synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      ToN1_14050 miaA; tRNA dimethylallyltransferase	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D      ToN1_25370 mnmE; tRNA modification GTPase	K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D      ToN1_24550 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D      ToN1_08550 selD; Selenide, water dikinase	K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D      ToN1_15640 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ	K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D      ToN1_25340 rnpA; Ribonuclease P protein component	K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D      ToN1_23570 rph; Ribonuclease PH	K00989 rph; ribonuclease PH [EC:2.7.7.56]
D      ToN1_17850 Putative exoribonuclease II	K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D      ToN1_45630 ligT; RNA 2',3'-cyclic phosphodiesterase	K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D      ToN1_08420 ABC transporter, ATP-binding protein	K06020 ettA; energy-dependent translational throttle protein EttA
D      ToN1_32590 glyQ; Glycine--tRNA ligase, alpha subunit	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D      ToN1_32600 glyS; Glycine--tRNA ligase, beta subunit	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D      ToN1_31700 gluQ; Glutamyl-Q tRNA(Asp) synthetase	K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D      ToN1_45640 Aminoacyl-tRNA synthetase-associated domain-containing protein	K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D      ToN1_39650 tadA; tRNA-specific adenosine deaminase	K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D      ToN1_34520 dusB; tRNA-dihydrouridine synthase B	K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D      ToN1_38730 dusC; tRNA-dihydrouridine(16) synthase	K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D      ToN1_32540 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase	K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D      ToN1_09760 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase	K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D      ToN1_27050 trmA; tRNA/tmRNA (uracil-C(5))-methyltransferase	K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D      ToN1_14490 trmD; tRNA (guanine-N(1)-)-methyltransferase	K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D      ToN1_35280 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase	K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D      ToN1_01130 Putative tRNA/rRNA methyltransferase	K03437 spoU; RNA methyltransferase, TrmH family
D      ToN1_36420 tRNA pseudouridine synthase C	K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D      ToN1_31770 rluA; Ribosomal large subunit pseudouridine synthase A	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      ToN1_42140 Pseudouridine synthase A	K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D      ToN1_35660 mnmA; tRNA-specific 2-thiouridylase	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D      ToN1_22500 ttcA; tRNA 2-thiocytidine biosynthesis protein	K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D      ToN1_42000 Sulfur carrier protein, TusA-like	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      ToN1_09700 iscA; Iron-binding protein	K13628 iscA; iron-sulfur cluster assembly protein
D      ToN1_39690 Putative aminomethyltransferase	K06980 ygfZ; tRNA-modifying protein YgfZ
D      ToN1_08770 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein	K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D      ToN1_16850 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase	K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D      ToN1_22170 queC; 7-cyano-7-deazaguanine synthase	K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D      ToN1_14560 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase	K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D      ToN1_22160 queE; 7-carboxy-7-deazaguanine synthase	K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D      ToN1_18260 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase	K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D      ToN1_11390 queG; Epoxyqueuosine reductase	K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D      ToN1_08560 selU; tRNA 2-selenouridine synthase	K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D      ToN1_16860 tgt; Queuine tRNA-ribosyltransferase	K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D      ToN1_16780 tilS; tRNA(Ile)-lysidine synthase	K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D      ToN1_45900 tRNA threonylcarbamoyladenosine biosynthesis protein	K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D      ToN1_10620 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase	K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D      ToN1_11400 tRNA threonylcarbamoyladenosine biosynthesis protein	K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D      ToN1_19100 THIF-type NAD/FAD binding fold domain-containing protein	K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D      ToN1_33300 rnr; Ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      ToN1_08170 pnp; Polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C    03012 Translation factors [BR:apet03012]
D      ToN1_08220 infB; Translation initiation factor IF-2	K02519 infB; translation initiation factor IF-2
D      ToN1_15070 infC; Translation initiation factor IF-3	K02520 infC; translation initiation factor IF-3
D      ToN1_02680 ABC transporter, ATP-binding protein	K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D      ToN1_23420 Putative ABC transporter, ATP-binding protein	K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D      ToN1_01280 tsf; Elongation factor Ts	K02357 tsf; elongation factor Ts
D      ToN1_19680 tuf1; Elongation factor Tu	K02358 tuf; elongation factor Tu
D      ToN1_19800 tuf2; Elongation factor Tu	K02358 tuf; elongation factor Tu
D      ToN1_19690 fusA2; Elongation factor G	K02355 fusA; elongation factor G
D      ToN1_11030 fusA1; Elongation factor G	K02355 fusA; elongation factor G
D      ToN1_34330 prfA; Peptide chain release factor I	K02835 prfA; peptide chain release factor 1
D      ToN1_01260 frr; Ribosome-recycling factor	K02838 frr; ribosome recycling factor
D      ToN1_34340 prmC; Release factor glutamine methyltransferase	K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D      ToN1_31790 pth; Peptidyl-tRNA hydrolase	K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D      ToN1_19450 infA1; Translation initiation factor IF-1	K02518 infA; translation initiation factor IF-1
D      ToN1_30390 infA2; Translation initiation factor IF-1	K02518 infA; translation initiation factor IF-1
D      ToN1_47540 infA3; Translation initiation factor IF-1	K02518 infA; translation initiation factor IF-1
D      ToN1_25030 efp; Elongation factor P	K02356 efp; elongation factor P
D      ToN1_47920 prfB; Peptide chain release factor II	K02836 prfB; peptide chain release factor 2
D      ToN1_22900 prfC; Peptide chain release factor III	K02837 prfC; peptide chain release factor 3
D      ToN1_23980 putative peptidyl-tRNA hydrolase	K15034 yaeJ; ribosome-associated protein
C    03110 Chaperones and folding catalysts [BR:apet03110]
D      ToN1_11230 clpA; ATP-dependent Clp protease ATP-binding, subunit ClpA	K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D      ToN1_47750 clpB2; Chaperone protein	K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D      ToN1_39090 clpX; ATP-dependent Clp protease ATP-binding subunit	K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D      ToN1_22060 hslU; ATP-dependent protease ATPase, subunit U	K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D      ToN1_47270 htpG; Chaperone protein	K04079 HSP90A; molecular chaperone HtpG
D      ToN1_37790 dnaK; Chaperone protein	K04043 dnaK; molecular chaperone DnaK
D      ToN1_40690 dnaK3; Chaperone protein	K04043 dnaK; molecular chaperone DnaK
D      ToN1_09680 hscA; Chaperone protein	K04044 hscA; molecular chaperone HscA
D      ToN1_16410 Heat shock protein 70 family protein	K04046 yegD; hypothetical chaperone protein
D      ToN1_34030 groL1; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_40660 groL2; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_41470 groL3; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_27610 dnaJ1; Heat shock protein	K03686 dnaJ; molecular chaperone DnaJ
D      ToN1_37780 dnaJ2; Chaperone protein	K03686 dnaJ; molecular chaperone DnaJ
D      ToN1_40700 dnaJ3; Chaperone protein	K03686 dnaJ; molecular chaperone DnaJ
D      ToN1_41520 Chaperone protein	K05516 cbpA; curved DNA-binding protein
D      ToN1_09690 hscB; Co-chaperone protein	K04082 hscB; molecular chaperone HscB
D      ToN1_08710 Heat shock protein, Hsp33 family	K04083 hslO; molecular chaperone Hsp33
D      ToN1_37800 grpE; Protein GrpE	K03687 GRPE; molecular chaperone GrpE
D      ToN1_15600 Small heat shock protein, Hsp20-like	K13993 HSP20; HSP20 family protein
D      ToN1_40780 putative small heat shock protein	K13993 HSP20; HSP20 family protein
D      ToN1_40790 putative small heat shock protein	K13993 HSP20; HSP20 family protein
D      ToN1_16770 RNA-binding protein, heat shock related	K04762 hslR; ribosome-associated heat shock protein Hsp15
D      ToN1_34020 groS1; 10 kDa chaperonin	K04078 groES; chaperonin GroES
D      ToN1_41480 groS2; 10 kDa chaperonin	K04078 groES; chaperonin GroES
D      ToN1_13950 putative periplasmic serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_09930 Putative periplasmic serine endoprotease, DegP-like	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_24930 putative periplasmic serine endoprotease	K04771 degP; serine protease Do [EC:3.4.21.107]
D      ToN1_27020 Putative ATPase, AAA-type	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      ToN1_37960 ftsH; ATP-dependent zinc metalloprotease	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      ToN1_24500 atpB; ATP synthase, subunit a	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      ToN1_35310 secB; Protein-export protein	K03071 secB; preprotein translocase subunit SecB
D      ToN1_46410 Copper chaperone domain-containing protein	K09796 pccA; periplasmic copper chaperone A
D      ToN1_25790 hypA; Hydrogenase maturation factor	K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D      ToN1_25800 hypB; Hydrogenase maturation factor	K04652 hypB; hydrogenase nickel incorporation protein HypB
D      ToN1_02760 DMSO/Nitrate reductase chaperone domain-containing protein	K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D      ToN1_07070 Chaperone protein, TorD-like	K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D      ToN1_42280 DMSO/Nitrate reductase chaperone family protein	K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D      ToN1_37740 ppiA; Peptidyl-prolyl cis-trans isomerase A	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      ToN1_37730 ppiB; Peptidyl-prolyl cis-trans isomerase B	K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D      ToN1_47760 putative peptidylprolyl isomerase	K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D      ToN1_16450 fkpA; Peptidyl-prolyl cis-trans isomerase	K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D      ToN1_20860 putative peptidyl-prolyl cis-trans isomerase	K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D      ToN1_11450 Peptidyl-prolyl cis-trans isomerase	K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D      ToN1_00610 putative FKBP-type peptidyl-prolyl cis-trans isomerase	K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D      ToN1_45830 Putative peptidylprolyl isomerase	K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D      ToN1_34590 surA; Chaperone	K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D      ToN1_37430 trxA; Thioredoxin	K03671 TXN; thioredoxin
D      ToN1_47010 Putative thioredoxin	K03671 TXN; thioredoxin
D      ToN1_49230 Thioredoxin-like protein	K03671 TXN; thioredoxin
D      ToN1_38620 trxC; Thioredoxin	K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D      ToN1_35320 grx; Glutaredoxin	K03676 grxC; glutaredoxin 3
D      ToN1_34350 grxD; Glutaredoxin	K07390 grxD; monothiol glutaredoxin
D      ToN1_29760 dsbA; Thiol:disulfide interchange protein	K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D      ToN1_19040 dsbB; Disulfide bond formation protein B	K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D      ToN1_07790 putative thiol:disulfide interchange protein	K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D      ToN1_31460 Thiol:disulfide interchange protein	K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D      ToN1_29210 dsbD; Thiol:disulfide interchange protein	K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D      ToN1_27900 dsbE; Periplasmic protein thiol:disulfide oxidoreductase	K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C    04131 Membrane trafficking [BR:apet04131]
D      ToN1_33140 ndk; Nucleoside diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      ToN1_17670 Gdt1 family protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      ToN1_42200 arsA; Arsenical pump-driving ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      ToN1_02860 gap1; Glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      ToN1_35060 gap2; Glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      ToN1_35350 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      ToN1_13250 pyk1; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_35010 pyk2; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_43450 pyk3; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_47270 htpG; Chaperone protein	K04079 HSP90A; molecular chaperone HtpG
C    04121 Ubiquitin system
C    03051 Proteasome [BR:apet03051]
D      ToN1_47270 htpG; Chaperone protein	K04079 HSP90A; molecular chaperone HtpG
C    03032 DNA replication proteins [BR:apet03032]
D      ToN1_00540 rnhA; Ribonuclease H	K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D      ToN1_29090 hupA; DNA-binding protein HU-alpha	K03530 hupB; DNA-binding protein HU-beta
D      ToN1_39110 DNA-binding protein HU-alpha	K03530 hupB; DNA-binding protein HU-beta
D      ToN1_15020 ihfA1; Integration host factor, alpha subunit	K04764 ihfA; integration host factor subunit alpha
D      ToN1_48140 ihfA2; Integration host factor, alpha subunit	K04764 ihfA; integration host factor subunit alpha
D      ToN1_48520 ihfA3; Integration host factor, alpha subunit	K04764 ihfA; integration host factor subunit alpha
D      ToN1_15240 ihfB; Integration host factor, beta subunit	K05788 ihfB; integration host factor subunit beta
D      ToN1_25320 dnaA; Chromosomal replication initiator protein	K02313 dnaA; chromosomal replication initiator protein
D      ToN1_31430 dnaB; Replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      ToN1_10650 dnaG; DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      ToN1_05820 Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_07490 ssb1; Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_19340 ssb2; Single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_10410 dnaE2; DNA polymerase III, alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      ToN1_25310 dnaN; Beta sliding clamp	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      ToN1_42030 holC; DNA polymerase III, chi subunit	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      ToN1_10520 holA; DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      ToN1_39720 holB; DNA polymerase III, delta subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      ToN1_00530 dnaQ1; DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_27730 putative excinuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_38910 Putative DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_40510 dnaQ2; DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_44350 putative DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_33530 dnaX; DNA polymerase III gamma subunit/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      ToN1_01150 rnhB; Ribonuclease H II	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      ToN1_30700 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      ToN1_09570 ligA; DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      ToN1_14110 DnaA regulatory inactivator Hda	K10763 hda; DnaA-homolog protein
D      ToN1_15300 gyrA; DNA gyrase, subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      ToN1_25300 gyrB; DNA gyrase, subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      ToN1_14750 parC; DNA topoisomerase 4, subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      ToN1_14650 parE; DNA topoisomerase 4 subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      ToN1_24890 topB; DNA topoisomerase III	K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C    03036 Chromosome and associated proteins [BR:apet03036]
D      ToN1_09880 rnc; Ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      ToN1_06670 DNA-binding protein, H-NS histone family	K03746 hns; DNA-binding protein H-NS
D      ToN1_10590 DNA-binding protein, H-NS histone family	K03746 hns; DNA-binding protein H-NS
D      ToN1_48120 DNA-binding protein, H-NS histone family	K03746 hns; DNA-binding protein H-NS
D      ToN1_29090 hupA; DNA-binding protein HU-alpha	K03530 hupB; DNA-binding protein HU-beta
D      ToN1_39110 DNA-binding protein HU-alpha	K03530 hupB; DNA-binding protein HU-beta
D      ToN1_15020 ihfA1; Integration host factor, alpha subunit	K04764 ihfA; integration host factor subunit alpha
D      ToN1_48140 ihfA2; Integration host factor, alpha subunit	K04764 ihfA; integration host factor subunit alpha
D      ToN1_48520 ihfA3; Integration host factor, alpha subunit	K04764 ihfA; integration host factor subunit alpha
D      ToN1_15240 ihfB; Integration host factor, beta subunit	K05788 ihfB; integration host factor subunit beta
D      ToN1_41520 Chaperone protein	K05516 cbpA; curved DNA-binding protein
D      ToN1_41510 Uncharacterized protein	K18997 cbpM; chaperone modulatory protein CbpM
D      ToN1_25320 dnaA; Chromosomal replication initiator protein	K02313 dnaA; chromosomal replication initiator protein
D      ToN1_34510 Putative Fis-like DNA-binding protein	K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D      ToN1_33230 hfq; RNA-binding protein	K03666 hfq; host factor-I protein
D      ToN1_13540 Transcriptional regulator, LysR family	K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D      ToN1_13100 Transcriptional regulator, AsnC family	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      ToN1_28660 Transcriptional regulator, AsnC family	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      ToN1_33630 Transcriptional regulator, AsnC family	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      ToN1_46890 Transcriptional regulator, AsnC family	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      ToN1_32080 Nucleoid-associated protein	K06899 ndpA; nucleoid-associated protein
D      ToN1_09590 smc; Chromosome partition protein	K03529 smc; chromosome segregation protein
D      ToN1_08270 scpA; Segregation and condensation protein A	K05896 scpA; segregation and condensation protein A
D      ToN1_08260 scpB; Segregation and condensation protein B	K06024 scpB; segregation and condensation protein B
D      ToN1_17030 ftsA; Cell division protein	K03590 ftsA; cell division protein FtsA
D      ToN1_46520 ftsB; Cell division protein	K05589 ftsB; cell division protein FtsB
D      ToN1_31940 ftsE; Cell division ATP-binding protein	K09812 ftsE; cell division transport system ATP-binding protein
D      ToN1_17130 ftsI; Peptidoglycan D,D-transpeptidase	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      ToN1_07990 FtsK domain-containing protein	K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D      ToN1_37150 ftsK; DNA translocase	K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D      ToN1_17140 ftsL; Cell division protein	K03586 ftsL; cell division protein FtsL
D      ToN1_17040 ftsQ; Cell division protein	K03589 ftsQ; cell division protein FtsQ
D      ToN1_17080 ftsW; putative peptidoglycan glycosyltransferase	K03588 ftsW; cell division protein FtsW
D      ToN1_31950 putative cell division protein, FtsX	K09811 ftsX; cell division transport system permease protein
D      ToN1_17020 ftsZ; Cell division protein	K03531 ftsZ; cell division protein FtsZ
D      ToN1_18420 zapA; Cell division protein	K09888 zapA; cell division protein ZapA
D      ToN1_18430 Uncharacterized protein	K09892 zapB; cell division protein ZapB
D      ToN1_31520 zapD; Cell division protein	K18778 zapD; cell division protein ZapD
D      ToN1_47670 AFG1-like ATPase family protein	K06916 zapE; cell division protein ZapE
D      ToN1_22840 Putative N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      ToN1_11410 N-acetylmuramoyl-L-alanine amidase	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      ToN1_14080 RND efflux system, membrane fusion protein	K03585 acrA; membrane fusion protein, multidrug efflux system
D      ToN1_39170 RND efflux system, MFP subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      ToN1_08720 minC; Septum site-determining protein	K03610 minC; septum site-determining protein MinC
D      ToN1_08730 minD; Septum site-determining protein	K03609 minD; septum site-determining protein MinD
D      ToN1_08740 minE; Cell division topological specificity factor	K03608 minE; cell division topological specificity factor
D      ToN1_45970 Transcriptional regulator, TetR family	K05501 slmA; TetR/AcrR family transcriptional regulator
D      ToN1_24300 mreB; Cell shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins
D      ToN1_24290 mreC; Cell shape-determining protein	K03570 mreC; rod shape-determining protein MreC
D      ToN1_24280 mreD; Cell shape-determining protein	K03571 mreD; rod shape-determining protein MreD
D      ToN1_24260 mrdB; cell elongation-specific peptidoglycan biosynthesis regulator	K05837 rodA; rod shape determining protein RodA
D      ToN1_24530 putative chromosome segregation ATPase	K03496 parA; chromosome partitioning protein
D      ToN1_10460 Putative chromosome partitioning protein ParA	K03496 parA; chromosome partitioning protein
D      ToN1_24520 putative chromosome partitioning protein, ParB-like	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D      ToN1_14750 parC; DNA topoisomerase 4, subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      ToN1_14650 parE; DNA topoisomerase 4 subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      ToN1_24550 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D      ToN1_24540 rsmG; Ribosomal RNA small subunit methyltransferase G	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D      ToN1_30500 xerC; Tyrosine recombinase	K03733 xerC; integrase/recombinase XerC
D      ToN1_10560 xerD; Tyrosine recombinase	K04763 xerD; integrase/recombinase XerD
D      ToN1_10300 mrp; Iron-sulfur cluster carrier protein	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      ToN1_35220 GTP-binding protein	K03978 engB; GTP-binding protein
C    03400 DNA repair and recombination proteins [BR:apet03400]
D      ToN1_10550 Methylated-DNA-protein-cysteine methyltransferase	K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D      ToN1_18000 Deoxyribodipyrimidine photo-lyase	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D      ToN1_26420 Single-strand selective monofunctional uracil DNA glycosylase	K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
D      ToN1_23720 mutY; A/G-specific adenine glycosylase	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D      ToN1_47350 Endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      ToN1_08950 Nucleoside diphosphate (NUDIX) hydrolase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      ToN1_11150 NUDIX hydrolase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      ToN1_31500 NUDIX family hydrolase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      ToN1_11160 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      ToN1_46050 Bifunctional transcriptional regulator, AraC family	K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D      ToN1_39120 alkB; Alpha-ketoglutarate-dependent dioxygenase	K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D      ToN1_45920 Uracil-DNA glycosylase	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      ToN1_46060 putative DNA-3-methyladenine glycosylase	K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D      ToN1_31040 tag; DNA-3-methyladenine glycosidase	K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D      ToN1_31860 mutM; Formamidopyrimidine-DNA glycosylase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D      ToN1_22630 xthA; Exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      ToN1_34640 Exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      ToN1_46130 recJ; Single-stranded-DNA-specific exonuclease	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      ToN1_09570 ligA; DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      ToN1_30700 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      ToN1_19360 uvrA; UvrABC system protein A	K03701 uvrA; excinuclease ABC subunit A
D      ToN1_25010 Uncharacterized protein	K03701 uvrA; excinuclease ABC subunit A
D      ToN1_10140 uvrB; UvrABC system protein B	K03702 uvrB; excinuclease ABC subunit B
D      ToN1_09820 uvrC; UvrABC system protein C	K03703 uvrC; excinuclease ABC subunit C
D      ToN1_10470 uvrD; DNA helicase II	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      ToN1_47030 ATP-dependent DNA helicase	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      ToN1_19730 rpoB; DNA-directed RNA polymerase, beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      ToN1_19720 rpoC; DNA-directed RNA polymerase, beta' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      ToN1_19410 rpoA; DNA-directed RNA polymerase, alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      ToN1_27670 rpoZ; DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D      ToN1_45550 mfd; Transcription-repair-coupling factor	K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D      ToN1_00510 mutS; DNA mismatch repair protein	K03555 mutS; DNA mismatch repair protein MutS
D      ToN1_14620 mutL; DNA mismatch repair protein	K03572 mutL; DNA mismatch repair protein MutL
D      ToN1_36510 xseA; Exodeoxyribonuclease 7, large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      ToN1_11500 xseB; Exodeoxyribonuclease 7, small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      ToN1_10410 dnaE2; DNA polymerase III, alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      ToN1_25310 dnaN; Beta sliding clamp	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      ToN1_42030 holC; DNA polymerase III, chi subunit	K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D      ToN1_10520 holA; DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      ToN1_39720 holB; DNA polymerase III, delta subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      ToN1_00530 dnaQ1; DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_27730 putative excinuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_38910 Putative DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_40510 dnaQ2; DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_44350 putative DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      ToN1_33530 dnaX; DNA polymerase III gamma subunit/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      ToN1_05820 Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_07490 ssb1; Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_19340 ssb2; Single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_27310 recB; RecBCD enzyme, subunit B	K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D      ToN1_27300 recC; RecBCD enzyme, subunit C	K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D      ToN1_16700 RecD helicase-like protein helix-hairpin-helix domain containing protein	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      ToN1_18220 RecD helicase-like helix-hairpin-helix domain containing	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      ToN1_19280 RecD helicase-like helix-hairpin-helix domain containing	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      ToN1_27320 recD; RecBCD enzyme, subunit D	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      ToN1_22320 recA; DNA recombination and repair protein	K03553 recA; recombination protein RecA
D      ToN1_30550 ruvA; Holliday junction ATP-dependent DNA helicase	K03550 ruvA; holliday junction DNA helicase RuvA
D      ToN1_30540 ruvB; Holliday junction ATP-dependent DNA helicase	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D      ToN1_29990 ruvC; Crossover junction endodeoxyribonuclease	K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D      ToN1_25690 priA; Primosomal protein N'	K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D      ToN1_31400 priB; Primosomal replication protein	K02686 priB; primosomal replication protein N
D      ToN1_45960 radA; DNA repair protein	K04485 radA; DNA repair protein RadA/Sms
D      ToN1_21570 recG; ATP-dependent DNA helicase	K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D      ToN1_09860 recO; DNA repair protein	K03584 recO; DNA repair protein RecO (recombination protein O)
D      ToN1_33550 recR; Recombination protein	K06187 recR; recombination protein RecR
D      ToN1_37870 recN; DNA repair protein	K03631 recN; DNA repair protein RecN (Recombination protein N)
D      ToN1_25070 rdgC; Recombination-associated protein	K03554 rdgC; recombination associated protein RdgC
D      ToN1_30140 putative protein DUF853	K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D      ToN1_15300 gyrA; DNA gyrase, subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      ToN1_25300 gyrB; DNA gyrase, subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      ToN1_29090 hupA; DNA-binding protein HU-alpha	K03530 hupB; DNA-binding protein HU-beta
D      ToN1_39110 DNA-binding protein HU-alpha	K03530 hupB; DNA-binding protein HU-beta
D      ToN1_34510 Putative Fis-like DNA-binding protein	K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D      ToN1_15020 ihfA1; Integration host factor, alpha subunit	K04764 ihfA; integration host factor subunit alpha
D      ToN1_48140 ihfA2; Integration host factor, alpha subunit	K04764 ihfA; integration host factor subunit alpha
D      ToN1_48520 ihfA3; Integration host factor, alpha subunit	K04764 ihfA; integration host factor subunit alpha
D      ToN1_15240 ihfB; Integration host factor, beta subunit	K05788 ihfB; integration host factor subunit beta
D      ToN1_16350 ATP-dependent DNA helicase protein	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D      ToN1_06670 DNA-binding protein, H-NS histone family	K03746 hns; DNA-binding protein H-NS
D      ToN1_10590 DNA-binding protein, H-NS histone family	K03746 hns; DNA-binding protein H-NS
D      ToN1_48120 DNA-binding protein, H-NS histone family	K03746 hns; DNA-binding protein H-NS
D      ToN1_20770 dinB; DNA polymerase IV	K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D      ToN1_00630 lexA; LexA repressor	K01356 lexA; repressor LexA [EC:3.4.21.88]
D      ToN1_00640 Cell division supressor family protein, SulA domain-containing	K14160 imuA; protein ImuA
D      ToN1_00650 UmuC domain-containing protein	K14161 imuB; protein ImuB
D      ToN1_00700 dnaE1; DNA polymerase III alpha subunit	K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D      ToN1_22330 recX; Regulatory protein	K03565 recX; regulatory protein
D      ToN1_40650 DNA polymerase, family X	K02347 polX; DNA polymerase (family X)
D      ToN1_24170 rep; ATP-dependent DNA helicase	K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D      ToN1_47680 putative ATP-dependent helicase	K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D      ToN1_38200 Vitamin B12-dependent ribonucleotide reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C    03029 Mitochondrial biogenesis [BR:apet03029]
D      ToN1_33570 petB; Cytochrome b	K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D      ToN1_08220 infB; Translation initiation factor IF-2	K02519 infB; translation initiation factor IF-2
D      ToN1_15070 infC; Translation initiation factor IF-3	K02520 infC; translation initiation factor IF-3
D      ToN1_01280 tsf; Elongation factor Ts	K02357 tsf; elongation factor Ts
D      ToN1_19680 tuf1; Elongation factor Tu	K02358 tuf; elongation factor Tu
D      ToN1_19800 tuf2; Elongation factor Tu	K02358 tuf; elongation factor Tu
D      ToN1_19690 fusA2; Elongation factor G	K02355 fusA; elongation factor G
D      ToN1_11030 fusA1; Elongation factor G	K02355 fusA; elongation factor G
D      ToN1_46690 Putative ATP-dependent DNA helicase	K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D      ToN1_09870 era; GTPase	K03595 era; GTPase
D      ToN1_34240 tyrS1; Tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      ToN1_35990 tyrS2; Tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      ToN1_10500 leuS; Leucine-tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      ToN1_15530 aspS; Aspartate-tRNA(Asp/Asn) ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      ToN1_29740 argS; Arginine-tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      ToN1_24320 gatA; Glutamyl-tRNA(Gln) amidotransferase, subunit A	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      ToN1_12340 Putative amidase	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      ToN1_24340 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      ToN1_24310 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit C	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      ToN1_05820 Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_07490 ssb1; Single-strand DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_19340 ssb2; Single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      ToN1_01210 bamA; Outer membrane protein assembly factor BamA	K07277 SAM50; outer membrane protein insertion porin family
D      ToN1_37790 dnaK; Chaperone protein	K04043 dnaK; molecular chaperone DnaK
D      ToN1_40690 dnaK3; Chaperone protein	K04043 dnaK; molecular chaperone DnaK
D      ToN1_37800 grpE; Protein GrpE	K03687 GRPE; molecular chaperone GrpE
D      ToN1_34030 groL1; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_40660 groL2; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_41470 groL3; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_34020 groS1; 10 kDa chaperonin	K04078 groES; chaperonin GroES
D      ToN1_41480 groS2; 10 kDa chaperonin	K04078 groES; chaperonin GroES
D      ToN1_27610 dnaJ1; Heat shock protein	K03686 dnaJ; molecular chaperone DnaJ
D      ToN1_37780 dnaJ2; Chaperone protein	K03686 dnaJ; molecular chaperone DnaJ
D      ToN1_40700 dnaJ3; Chaperone protein	K03686 dnaJ; molecular chaperone DnaJ
D      ToN1_43190 Metallo-beta-lactamase domain-containing protein	K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D      ToN1_09720 iscS; Cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      ToN1_09730 Putative cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      ToN1_09690 hscB; Co-chaperone protein	K04082 hscB; molecular chaperone HscB
D      ToN1_34350 grxD; Glutaredoxin	K07390 grxD; monothiol glutaredoxin
D      ToN1_10300 mrp; Iron-sulfur cluster carrier protein	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      ToN1_16110 ctaB; Protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      ToN1_16170 ctaG; Cytochrome c oxidase assembly protein	K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D      ToN1_16120 putative cytochrome oxidase assembly protein, CtaA family	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      ToN1_25360 yidC; Membrane protein insertase	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      ToN1_16140 SURF1-like protein	K14998 SURF1; surfeit locus 1 family protein
D      ToN1_16100 SCO1/SenC family protein	K07152 SCO1; protein SCO1
D      ToN1_17740 Copper chaperone SCO1/SenC family protein	K07152 SCO1; protein SCO1
D      ToN1_49750 SCO1/SenC family protein	K07152 SCO1; protein SCO1
D      ToN1_47270 htpG; Chaperone protein	K04079 HSP90A; molecular chaperone HtpG
B
B  09183 Protein families: signaling and cellular processes
C    02000 Transporters [BR:apet02000]
D      ToN1_30820 msbA; Lipid A export ATP-binding/permease protein	K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D      ToN1_09160 Fusion of ABC transporter-type transmembrane and ATP binding protein	K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D      ToN1_21890 putative peptide ABC transporter fusion protein of transmembrane and ATP binding protein	K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D      ToN1_01740 Putative ABC transporter, permease and ATP-bindig domain-containing	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      ToN1_22560 Putative ABC transporter permease protein	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      ToN1_27210 ABC transporter	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      ToN1_38460 ABC efflux transporter, permease protein	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      ToN1_18330 ABC transporter, ATP-binding and permease fusion protein	K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D      ToN1_27250 Proteases secretion ATP-binding protein D	K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D      ToN1_18610 macB; Macrolide export ATP-binding/permease protein	K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D      ToN1_21850 Putative ABC transporter, ATP-binding protein	K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D      ToN1_12040 ABC transporter, ATP-binding protein	K15738 uup; ABC transport system ATP-binding/permease protein
D      ToN1_45470 cysP2; Sulfate ABC transporter, periplasmic binding protein	K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D      ToN1_36490 Sulfate ABC transporter periplasmic binding protein	K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D      ToN1_36470 cysT1; Sulfate ABC transporter, permease protein	K02046 cysU; sulfate/thiosulfate transport system permease protein
D      ToN1_45480 cysT2; Sulfate ABC transporter, permease protein	K02046 cysU; sulfate/thiosulfate transport system permease protein
D      ToN1_36460 cysW1; Sulfate ABC transporter, permease protein	K02047 cysW; sulfate/thiosulfate transport system permease protein
D      ToN1_45490 cysW2; Sulfate ABC transporter, permease protein	K02047 cysW; sulfate/thiosulfate transport system permease protein
D      ToN1_36450 cysA1; Sulfate ABC transporter, ATP-binding protein	K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D      ToN1_45500 cysA2; Sulfate ABC transporter, ATP-binding protein	K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D      ToN1_23830 modA; Molybdate-binding protein	K02020 modA; molybdate transport system substrate-binding protein
D      ToN1_23820 modB; Molybdenum transport system, permease protein	K02018 modB; molybdate transport system permease protein
D      ToN1_23810 modC; Molybdenum import ATP-binding protein	K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D      ToN1_29590 Molybdate or tungstate transport system permease protein	K05772 tupA; tungstate transport system substrate-binding protein
D      ToN1_41840 ABC transporter, permease protein	K05773 tupB; tungstate transport system permease protein
D      ToN1_41850 ABC transporter, ATP-binding protein	K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D      ToN1_33330 Uncharacterized protein	K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D      ToN1_33340 nasB; Nitrate ABC transporter, permease protein	K15577 nrtB; nitrate/nitrite transport system permease protein
D      ToN1_33350 nasD; Nitrate ABC transporter, ATP-binding protein	K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D      ToN1_25590 Uncharacterized protein	K02012 afuA; iron(III) transport system substrate-binding protein
D      ToN1_47490 Putative Fe(3+) ABC transporter, substrate-binding protein	K02012 afuA; iron(III) transport system substrate-binding protein
D      ToN1_47460 ABC transporter, permease protein	K02011 afuB; iron(III) transport system permease protein
D      ToN1_47450 ABC transporter, ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      ToN1_27170 Putrescine-binding periplasmic protein	K11073 potF; putrescine transport system substrate-binding protein
D      ToN1_27200 potC; Spermidine/putrescine transport system permease protein	K11074 potI; putrescine transport system permease protein
D      ToN1_27190 potB2; Spermidine/putrescine transport system permease protein	K11075 potH; putrescine transport system permease protein
D      ToN1_27180 potA2; Spermidine/putrescine import ATP-binding protein	K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D      ToN1_16600 Extracellular solute-binding protein	K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D      ToN1_50210 Solute-binding domain-containing protein	K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D      ToN1_16620 potB1; Spermidine/putrescine transport system, permease protein	K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D      ToN1_50190 Putative ABC transporter, permease protein	K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D      ToN1_50200 Putative ABC transporter, permease protein	K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D      ToN1_16610 potA1; Spermidine/putrescine import ATP-binding protein	K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D      ToN1_50230 Polyamine ABC transporter, ATP-binding protein	K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D      ToN1_44540 ABC transporter, substrate-binding protein	K02002 proX; glycine betaine/proline transport system substrate-binding protein
D      ToN1_44850 Glycine/betaine ABC transporter, substrate-binding protein	K02002 proX; glycine betaine/proline transport system substrate-binding protein
D      ToN1_44560 ABC transporter, permease protein	K02001 proW; glycine betaine/proline transport system permease protein
D      ToN1_44890 Putative glycine/betaine ABC transporter, permease protein	K02001 proW; glycine betaine/proline transport system permease protein
D      ToN1_44550 ABC transporter, ATP-binding protein	K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D      ToN1_44880 proV; Glycine/betaine ABC transporter, ATP-binding protein	K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D      ToN1_30190 Uncharacterized protein	K05846 opuBD; osmoprotectant transport system permease protein
D      ToN1_23250 SsuA/THI5-like domain-containing protein	K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D      ToN1_02200 Putative ABC transporter, substrate-binding protein	K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D      ToN1_41680 SsuA/THI5-like domain-containing protein	K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D      ToN1_02190 ABC transporter permease	K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D      ToN1_41690 ABC transporter, permease protein	K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D      ToN1_02210 ABC transporter ATP-binding protein	K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D      ToN1_41700 ABC transporter, ATP-binding protein	K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D      ToN1_44120 ABC transporter, ATP-binding protein	K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      ToN1_44090 Bacterial extracellular solute-binding domain-containing protein	K10236 thuE; trehalose/maltose transport system substrate-binding protein
D      ToN1_44100 ABC transporter, permease protein	K10237 thuF; trehalose/maltose transport system permease protein
D      ToN1_44110 ABC transporter, permease protein	K10238 thuG; trehalose/maltose transport system permease protein
D      ToN1_43770 rbsB; Ribose ABC transporter, periplasmic ribose-binding protein	K10439 rbsB; ribose transport system substrate-binding protein
D      ToN1_43780 rbsC; Ribose ABC transporter, permease protein	K10440 rbsC; ribose transport system permease protein
D      ToN1_43790 rbsA; Ribose ABC transporter, ATP-binding protein	K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D      ToN1_32750 mlaD; Phospholipid ABC transporter periplasmic binding protein	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      ToN1_45750 ABC transporter related	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      ToN1_46100 ABC transporter related	K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D      ToN1_32740 mlaE; Phospholipid ABC transporter permease protein	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      ToN1_45730 Putative ABC transporter, permease protein	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      ToN1_46080 Putative ABC transporter, permease protein	K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D      ToN1_32730 mlaF; Phospholipid ABC transporter ATP-binding protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      ToN1_45740 Putative ABC transporter, ATP-binding protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      ToN1_46090 Putative ABC transporter, ATP-binding protein	K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D      ToN1_45760 ABC transporter related	K18480 linN; cholesterol transport system auxiliary component
D      ToN1_46110 ABC transporter related	K18480 linN; cholesterol transport system auxiliary component
D      ToN1_13150 Putative toluene tolerance protein	K07323 mlaC; phospholipid transport system substrate-binding protein
D      ToN1_32770 mlaC; Phospholipid-binding lipoprotein	K07323 mlaC; phospholipid transport system substrate-binding protein
D      ToN1_32780 STAS domain-containing protein	K07122 mlaB; phospholipid transport system transporter-binding protein
D      ToN1_11590 Putative ABC-type periplasmic 3-phosphate-binding protein	K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D      ToN1_33690 Bacterial extracellular solute-binding domain-containing protein	K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D      ToN1_21800 Phosphate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      ToN1_33110 Putative ABC transporter substrate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      ToN1_37990 pstS; Phosphate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      ToN1_38000 pstC; Phosphate transport system permease protein	K02037 pstC; phosphate transport system permease protein
D      ToN1_38010 pstA; Phosphate transport system permease protein	K02038 pstA; phosphate transport system permease protein
D      ToN1_38020 pstB; Phosphate import ATP-binding protein	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      ToN1_12490 gltI1; Glutamate/aspartate periplasmic-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      ToN1_24610 gltI2; Glutamate/aspartate periplasmic-binding protein	K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D      ToN1_24590 gltK2; Glutamate/aspartate transport system permease protein	K10002 gltK; glutamate/aspartate transport system permease protein
D      ToN1_12460 gltK1; Glutamate/aspartate transport system permease protein	K10002 gltK; glutamate/aspartate transport system permease protein
D      ToN1_24600 gltJ2; Glutamate/aspartate transport system permease protein	K10003 gltJ; glutamate/aspartate transport system permease protein
D      ToN1_12470 gltJ1; Glutamate/aspartate transport system permease protein	K10003 gltJ; glutamate/aspartate transport system permease protein
D      ToN1_24580 gltL3; Glutamate/aspartate transport ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_00150 gltL1; Glutamate/aspartate transport ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_12450 gltL2; Glutamate/aspartate transport ATP-binding protein	K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_41120 Amino acid ABC transporter, substrate-binding protein	K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D      ToN1_41140 Amino acid ABC transporter, permease protein	K10023 aotM; arginine/ornithine transport system permease protein
D      ToN1_41130 Amino acid ABC transporter, permease protein	K10024 aotQ; arginine/ornithine transport system permease protein
D      ToN1_41150 Amino acid ABC transporter, ATP-binding protein	K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D      ToN1_00110 ABC transporter, branched-chain amino acid periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_02370 livB; Amino acid ABC transport system, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_19960 Putative amino acid/amide ABC transporter, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_22250 High-affinity branched-chain amino acid transport system, substrate binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_23150 High-affinity branched-chain amino acid transport system, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_23160 High-affinity branched-chain amino acid transport system, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_23750 Putative amino acid ABC transporter, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_09340 Amino acid/amide ABC transporter, periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_26730 Putative aromatic compound ABC transporter periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_28920 Amino acid/amide ABC transporter, periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_29280 Amino acid ABC transporter periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_40230 Amino acid ABC transporter periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_43990 Amino acid/amide ABC transporter, periplasmic binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_48950 ABC transporter, substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_49260 High-affinity branched-chain amino acid transport system, periplasmic component	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_50450 Leucine-binding domain-containing protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_50460 Leucine-binding domain-containing protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      ToN1_02360 livH; putative phenylacetate ABC transport system permease protein 1	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_19980 putative ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_22260 High-affinity branched-chain amino acid transport system, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_23170 High-affinity branched-chain amino acid transport system, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_23770 ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_26740 Putative aromatic compound ABC transporter permease protein I	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_28930 Amino acid/amide ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_48940 ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_49270 High-affinity branched-chain amino acid transport system, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      ToN1_02350 livM; putative phenylacetate ABC transport system permease protein 2	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_19970 putative ABC transporter, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_22270 High-affinity branched-chain amino acid transport system, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_23180 High-affinity branched-chain amino acid transport system, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_23760 ABC transporter, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_26750 Putative aromatic compound ABC transporter permease protein II	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_28940 Amino acid/amide ABC transporter, permease protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_48930 ABC transporter, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_49280 High-affinity branched-chain amino acid transport system, permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      ToN1_02340 livG; putative phenylacetate ABC transporter ATP-binding protein 1	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_19990 Putative branched-chain amino acid ABC transporter, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_22230 High-affinity branched-chain amino acid transport, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_23190 High-affinity branched-chain amino acid transport, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_26760 Putative aromatic compound ABC transporter, ATP binding protein I	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_43110 Putative ABC transporter, permease protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_48920 ABC transporter, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_49290 Putative high-affinity branched-chain amino acid transport, ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      ToN1_02330 livF; putative phenylacetate ABC transporter ATP-binding protein 2	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_19950 putative ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_22240 High-affinity branched-chain amino acid transport, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_23200 High-affinity branched-chain amino acid transport, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_26770 Putative aromatic compound ABC transporter, ATP binding protein II	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_28950 Amino acid/amide ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_43120 Putative ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_48910 ABC transporter, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_49300 High-affinity branched-chain amino acid transport, ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      ToN1_00190 ABC transporter, amino acid periplasmic binding protein	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      ToN1_41750 ABC transporter, substrate-binding protein	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      ToN1_50130 Solute-binding domain-containing protein	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      ToN1_00170 ABC transporter, permease protein, amino acid transport	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      ToN1_00180 ABC transporter, permease protein, amino acid transport	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      ToN1_47780 Putative ABC transporter, periplasmic binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      ToN1_47790 Putative ABC transporter, permease protein	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      ToN1_47800 Putative ABC transporter, permease protein	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      ToN1_00590 putative oligopeptide/dipeptide ABC transporter, ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      ToN1_20600 ABC transporter, periplasmic binding protein	K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D      ToN1_42130 ABC transporter, periplasmic binding protein	K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D      ToN1_30990 ABC transporter permease protein, BtuC-like	K02015 ABC.FEV.P; iron complex transport system permease protein
D      ToN1_31000 ABC transporter ATP-binding protein, BtuD-like	K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D      ToN1_18390 Putative ABC transporter, periplasmic binding protein	K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D      ToN1_20160 Putative ABC transporter, periplasmic solute binding protein	K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D      ToN1_18380 Putative ABC transporter, permease protein	K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D      ToN1_20150 ABC transporter, TroCD-like	K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D      ToN1_18370 Putative ABC transporter, ATP-binding protein	K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D      ToN1_42050 LPS export ABC transporter, permease protein	K07091 lptF; lipopolysaccharide export system permease protein
D      ToN1_42060 LPS export ABC transporter, permease protein	K11720 lptG; lipopolysaccharide export system permease protein
D      ToN1_22340 lptB; Lipopolysaccharide export system, ATP-binding protein	K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D      ToN1_29500 nodj; ABC transporter, permease protein	K09694 nodJ; lipooligosaccharide transport system permease protein
D      ToN1_29510 nodI; Nod factor export ATP-binding protein I	K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D      ToN1_00970 nosY; Nitrous oxide reductase, maturation protein (permease protein)	K19341 nosY; Cu-processing system permease protein
D      ToN1_00960 nosF; Nitrous oxide reductase, maturation protein (ATP-binding protein)	K19340 nosF; Cu-processing system ATP-binding protein
D      ToN1_46180 ABC transporter, permease protein, lipoprotein-releasing system	K09808 lolC_E; lipoprotein-releasing system permease protein
D      ToN1_46190 ABC transporter, ATP-binding protein, lipoprotein-releasing system	K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D      ToN1_27870 ccmD1; Heme exporter protein D	K02196 ccmD; heme exporter protein D
D      ToN1_28050 ccmD2; Heme exporter protein D	K02196 ccmD; heme exporter protein D
D      ToN1_27860 ccmC1; Heme exporter protein C	K02195 ccmC; heme exporter protein C
D      ToN1_28060 ccmC2; Heme exporter protein C	K02195 ccmC; heme exporter protein C
D      ToN1_27850 ccmB; Heme exporter protein B	K02194 ccmB; heme exporter protein B
D      ToN1_27840 ccmA; Cytochrome c biogenesis ATP-binding export protein	K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D      ToN1_31950 putative cell division protein, FtsX	K09811 ftsX; cell division transport system permease protein
D      ToN1_31940 ftsE; Cell division ATP-binding protein	K09812 ftsE; cell division transport system ATP-binding protein
D      ToN1_32800 Transport permease protein, ABC-2-type	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      ToN1_41740 ABC transporter, permease protein, ABC-2-type	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      ToN1_43840 ABC transport, permease protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      ToN1_46940 Putative ABC transporter, permease protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      ToN1_32790 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      ToN1_41710 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      ToN1_43830 ABC transport, ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      ToN1_02900 ABC transporter permease protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      ToN1_24040 ABC transporter permease domain-containing protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      ToN1_08460 Putative ABC transporter, permease protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      ToN1_10220 ABC transporter permease domain-containing protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      ToN1_31260 Putative ABC transporter permease protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      ToN1_31270 Putative ABC transporter, permease protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      ToN1_45990 Putative ABC transporter, permease protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      ToN1_24030 Putative ABC transporter	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      ToN1_08470 ABC transporter, ATP-binding protein	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      ToN1_08530 ABC transporter, ATP-binding protein	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      ToN1_31280 ABC transporter, ATP-binding protein	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      ToN1_46000 ABC transporter, ATP-binding protein	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      ToN1_09470 sufc; Iron-regulated ABC transporter, ATPase subunit	K09013 sufC; Fe-S cluster assembly ATP-binding protein
D      ToN1_00670 MATE efflux family protein	K26939 norM; MATE family, multidrug efflux pump
D      ToN1_50160 Major facilitator superfamily (MFS) protein	K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D      ToN1_43280 Major facilitator superfamily (MFS) protein	K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D      ToN1_26990 4-hydroxybenzoate transporter	K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D      ToN1_39220 Putative 4-hydroxybenzoate transporter protein	K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D      ToN1_48900 Putative benzoate transport protein	K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D      ToN1_08820 Major facilitator superfamily protein	K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D      ToN1_37520 Major facilitator superfamily (MFS) protein	K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D      ToN1_00810 narK_narT; Nitrate/proton symporter	K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D      ToN1_00820 narK_narU; Nitrate/nitrite transporter	K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D      ToN1_33410 MFS transporter	K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D      ToN1_45930 Major facilitator superfamily (MFS) protein	K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D      ToN1_26430 Putative muropeptide transporter	K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D      ToN1_05970 Bcr/CflA subfamily drug resistance MFS transporter	K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D      ToN1_22790 MFS transporter, Bcr/CmlA-like	K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D      ToN1_23300 Bcr/CflA subfamily drug resistance MFS transporter	K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D      ToN1_01880 MFS (Major facilitatotor superfamily) transporter	K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D      ToN1_45180 Major facilitator superfamily (MFS) protein	K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D      ToN1_42110 Major facilitator superfamily (MFS) protein	K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D      ToN1_26520 PTS related phosphoenolpyruvate-protein phosphotransferase	K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D      ToN1_26530 PTS related phosphocarrier protein	K02784 ptsH; phosphocarrier protein HPr
D      ToN1_26540 Phosphotransferase system domain-containing protein, mannose-type IIA component	K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D      ToN1_22370 Phosphoenolpyruvate-dependent sugar phosphotransferase family protein	K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D      ToN1_38800 Putative potassium channel	K10716 kch; voltage-gated potassium channel
D      ToN1_23350 amt; Ammonium transporter	K03320 amt; ammonium transporter, Amt family
D      ToN1_13400 Putative ammonium transporter	K03320 amt; ammonium transporter, Amt family
D      ToN1_22430 Glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      ToN1_29520 putative glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      ToN1_36240 Glutathione S-transferase family protein	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      ToN1_40960 Glutathione S-transferase	K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D      ToN1_33590 sspA; Stringent starvation protein A	K03599 sspA; stringent starvation protein A
D      ToN1_28390 Tetratricopeptide repeat domain-containing protein	K07114 yfbK; Ca-activated chloride channel homolog
D      ToN1_28400 VWF superfamily protein	K07114 yfbK; Ca-activated chloride channel homolog
D      ToN1_16830 BAX inhibitor-associated protein	K19416 yccA; modulator of FtsH protease
D      ToN1_23790 mscL; Large-conductance mechanosensitive channel	K03282 mscL; large conductance mechanosensitive channel
D      ToN1_40770 Mechanosensitive ion channel protein	K03442 mscS; small conductance mechanosensitive channel
D      ToN1_17900 mgtE; Magnesium transporter	K06213 mgtE; magnesium transporter
D      ToN1_12810 AmiS/UreI transporter	K22112 amiS; putative amide transporter protein
D      ToN1_14790 motA1; Flagellar motor protein A	K02556 motA; chemotaxis protein MotA
D      ToN1_36320 motA2; Flagellar motor protein	K02556 motA; chemotaxis protein MotA
D      ToN1_14780 motB1; Flagellar motor protein B	K02557 motB; chemotaxis protein MotB
D      ToN1_36330 motB2; Flagellar motor protein	K02557 motB; chemotaxis protein MotB
D      ToN1_18580 exbB; Outer membrane transport energization protein	K03561 exbB; biopolymer transport protein ExbB
D      ToN1_36530 putative biopolymer transport protein, ExbB-like	K03561 exbB; biopolymer transport protein ExbB
D      ToN1_18590 exbD; Outer membrane transport energization protein	K03559 exbD; biopolymer transport protein ExbD
D      ToN1_36540 putative biopolymer transport protein, ExbD-like	K03559 exbD; biopolymer transport protein ExbD
D      ToN1_22100 tolQ; Tol-Pal system protein, proton channel protein	K03562 tolQ; biopolymer transport protein TolQ
D      ToN1_22110 tolR; Tol-Pal system protein, biopolymer transport protein	K03560 tolR; biopolymer transport protein TolR
D      ToN1_11680 corA; Magnesium/cobalt transport protein	K03284 corA; magnesium transporter
D      ToN1_31310 Putative fluoride ion transporter	K06199 crcB; fluoride exporter
D      ToN1_18760 putative protein UPF0187	K08994 yneE; ion channel-forming bestrophin family protein
D      ToN1_16810 Transporter-associated domain-containing protein	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      ToN1_49490 CNNM family protein	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      ToN1_44050 Putative porin, LamB-type	K16077 scrY; sucrose porin
D      ToN1_15320 OmpA-like domain-containing protein	K03286 TC.OOP; OmpA-OmpF porin, OOP family
D      ToN1_15400 OmpA family protein	K03286 TC.OOP; OmpA-OmpF porin, OOP family
D      ToN1_21740 Long-chain fatty acid transport protein	K06076 fadL; long-chain fatty acid transport protein
D      ToN1_30000 Outer membrane lipase/esterase	K12686 apeE; outer membrane lipase/esterase
D      ToN1_18710 TonB-dependent receptor	K16090 fiu; catecholate siderophore receptor
D      ToN1_18720 fecA; TonB-dependent receptor	K16090 fiu; catecholate siderophore receptor
D      ToN1_30980 ABC transporter periplasmic binding protein, BtuB-like	K16092 btuB; vitamin B12 transporter
D      ToN1_18730 TonB-dependent siderophore receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      ToN1_22550 TonB-dependent receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      ToN1_22960 Putative TonB-dependent receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      ToN1_10990 Putative TonB-dependent receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      ToN1_24920 putative TonB-dependent receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      ToN1_40870 putative TonB dependent receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      ToN1_41530 TonB-dependent receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      ToN1_46420 Putative TonB-dependent receptor	K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D      ToN1_03040 Putative outer membrane efflux protein	K15725 czcC; outer membrane protein, heavy metal efflux system
D      ToN1_18870 Putative outer membrane efflux protein	K15725 czcC; outer membrane protein, heavy metal efflux system
D      ToN1_17570 Type I secretion outer membrane protein, TolC family	K12340 tolC; outer membrane protein
D      ToN1_18270 Type I secretion outer membrane family protein, TolC	K12543 lapE; outer membrane protein, adhesin transport system
D      ToN1_04560 RND efflux system outer membrane lipoprotein, NodT family	K18903 oprC; outer membrane protein, multidrug efflux system
D      ToN1_18620 RND efflux system outer membrane lipoprotein, NodT family	K18139 oprM; outer membrane protein, multidrug efflux system
D      ToN1_39190 RND efflux system outer membrane lipoprotein, NodT family	K18139 oprM; outer membrane protein, multidrug efflux system
D      ToN1_16050 Putative polysaccharide export protein	K01991 wza; polysaccharide biosynthesis/export protein
D      ToN1_34700 Putative exopolysaccharide export protein	K01991 wza; polysaccharide biosynthesis/export protein
D      ToN1_01210 bamA; Outer membrane protein assembly factor BamA	K07277 SAM50; outer membrane protein insertion porin family
D      ToN1_33210 bamB; Outer membrane protein assembly factor	K17713 bamB; outer membrane protein assembly factor BamB
D      ToN1_14900 Outer membrane protein assembly factor	K07287 bamC; outer membrane protein assembly factor BamC
D      ToN1_37300 bamD; Outer membrane protein assembly factor BamD	K05807 bamD; outer membrane protein assembly factor BamD
D      ToN1_37890 bamE; Outer membrane protein assembly factor	K06186 bamE; outer membrane protein assembly factor BamE
D      ToN1_33650 Bacterial surface antigen (D15) domain-containing protein	K07278 tamA; translocation and assembly module TamA
D      ToN1_16470 Translocation and assembly module TamB domain-containing protein	K09800 tamB; translocation and assembly module TamB
D      ToN1_32690 Lipopolysaccharide export system family protein, Lpta-like	K09774 lptA; lipopolysaccharide export system protein LptA
D      ToN1_32700 Lipopolysaccharide export system family protein, LptC-like	K11719 lptC; lipopolysaccharide export system protein LptC
D      ToN1_34580 lptD; LPS-assembly protein	K04744 lptD; LPS-assembly protein
D      ToN1_10510 lptE; LPS-assembly lipoprotein	K03643 lptE; LPS-assembly lipoprotein
D      ToN1_32570 Cation efflux protein	K06189 corC; hemolysin (HlyC) family protein
D      ToN1_11000 LrgA family protein	K06518 cidA; holin-like protein
D      ToN1_13650 Amino acid permease	K11735 gabP; GABA permease
D      ToN1_33520 ZIP family metal transporter	K07238 TC.ZIP; zinc transporter, ZIP family
D      ToN1_18890 cusA; Cation efflux system protein	K07787 cusA; copper/silver efflux system protein
D      ToN1_04570 RND efflux system, AcrB TolC docking domain	K18902 bpeF; multidrug efflux pump
D      ToN1_17600 Efflux transporter, acriflavin resistance protein family	K18303 mexK; multidrug efflux pump
D      ToN1_14070 Multidrug efflux transporter	K18138 acrB; multidrug efflux pump
D      ToN1_39180 Efflux pump membrane transporter	K18138 acrB; multidrug efflux pump
D      ToN1_44840 Small multidrug resistance family protein	K03297 emrE; small multidrug resistance pump
D      ToN1_17840 RarD family protein	K05786 rarD; chloramphenicol-sensitive protein RarD
D      ToN1_13050 putative protein UPF0060	K09771 TC.SMR3; small multidrug resistance family-3 protein
D      ToN1_46170 lctP; L-lactate permease	K03303 lutP; lactate permease
D      ToN1_45510 Sodium:calcium antiporter	K07301 yrbG; cation:H+ antiporter
D      ToN1_20530 actP1; Cation/acetate symporter	K14393 actP; cation/acetate symporter
D      ToN1_11060 Sodium/solute symporter, VC2705 subfamily	K14393 actP; cation/acetate symporter
D      ToN1_34080 actP2; Cation/acetate symporter	K14393 actP; cation/acetate symporter
D      ToN1_44360 Sodium/solute symporter	K14393 actP; cation/acetate symporter
D      ToN1_12770 dctA1; C4-dicarboxylate transport protein	K11103 dctA; aerobic C4-dicarboxylate transport protein
D      ToN1_30030 dctA2; C4-dicarboxylate transport protein	K11103 dctA; aerobic C4-dicarboxylate transport protein
D      ToN1_50100 putative Na+/H+ antiporter	K03315 nhaC; Na+:H+ antiporter, NhaC family
D      ToN1_08440 Sodium/proton antiporter	K24160 NHA1; sodium/hydrogen antiporter
D      ToN1_21900 Putative potassium transporter	K03455 KEA1_2_3; K+:H+ antiporter
D      ToN1_32720 K+/H+ antiporter	K03455 KEA1_2_3; K+:H+ antiporter
D      ToN1_25450 trkH; Trk system potassium uptake protein H	K03498 trkH; trk/ktr system potassium uptake protein
D      ToN1_25440 trkA; Trk system potassium uptake protein A	K03499 trkA; trk/ktr system potassium uptake protein
D      ToN1_22690 putative uracil permease	K02824 uraA; uracil permease
D      ToN1_12720 Purine/Xanthine permease	K24206 uacT; uric acid transporter
D      ToN1_12680 Xanthine/uracil/vitamin C permease	K06901 pbuG; adenine/guanine/hypoxanthine permease
D      ToN1_33480 Permease	K06901 pbuG; adenine/guanine/hypoxanthine permease
D      ToN1_13480 benE; Benzoate transporter	K05782 benE; benzoate membrane transport protein
D      ToN1_47280 Chloride channel protein	K03281 clcA; chloride channel protein, CIC family
D      ToN1_00430 Putative chromate transporter	K07240 chrA; chromate transporter
D      ToN1_12350 Chromate transport related protein	K07240 chrA; chromate transporter
D      ToN1_12360 Chromate transport related protein	K07240 chrA; chromate transporter
D      ToN1_10330 sulP; Sulfate anion transporter	K03321 TC.SULP; sulfate permease, SulP family
D      ToN1_46640 Sulfate permease family protein	K03321 TC.SULP; sulfate permease, SulP family
D      ToN1_16740 dctP5; C4-dicarboxylate-binding periplasmic protein	K11688 dctP; C4-dicarboxylate-binding protein DctP
D      ToN1_04090 dctP2; C4-dicarboxylate-binding periplasmic protein	K11688 dctP; C4-dicarboxylate-binding protein DctP
D      ToN1_16730 dctQ5; C4-dicarboxylate TRAP transporter, small permease protein	K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D      ToN1_04100 dctQ2; C4-dicarboxylate TRAP transporter small permease protein	K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D      ToN1_12300 dctQ3; C4-dicarboxylate TRAP transporter small permease protein	K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D      ToN1_16720 dctM5; C4-dicarboxylate TRAP transporter, large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_04110 dctM2; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_21040 dctM6; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_12290 dctM3; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_13560 dctM4; C4-dicarboxylate TRAP transporter, large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_44450 dctM10; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_44730 dctM11; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_50010 dctM12; C4-dicarboxylate TRAP transporter large permease protein	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      ToN1_32010 dctQ8; C4-dicarboxylate TRAP transporter small permease protein	K21394 yiaM; TRAP-type transport system small permease protein
D      ToN1_44440 dctQ10; C4-dicarboxylate TRAP transporter small permease protein	K21394 yiaM; TRAP-type transport system small permease protein
D      ToN1_44740 dctQ11; C4-dicarboxylate TRAP transporter small permease protein	K21394 yiaM; TRAP-type transport system small permease protein
D      ToN1_50020 dctQ12; C4-dicarboxylate TRAP transporter small permease protein	K21394 yiaM; TRAP-type transport system small permease protein
D      ToN1_50540 dctQ13; C4-dicarboxylate TRAP transporter small permease protein	K21394 yiaM; TRAP-type transport system small permease protein
D      ToN1_13580 dctP4; C4-dicarboxylate TRAP transporter, periplasmic binding protein	K21395 yiaO; TRAP-type transport system periplasmic protein
D      ToN1_21020 dctP6; C4-dicarboxylate-binding periplasmic protein	K21395 yiaO; TRAP-type transport system periplasmic protein
D      ToN1_26900 dctP7; C4-dicarboxylate-binding periplasmic protein	K21395 yiaO; TRAP-type transport system periplasmic protein
D      ToN1_32020 dctP8; C4-dicarboxylate-binding periplasmic protein	K21395 yiaO; TRAP-type transport system periplasmic protein
D      ToN1_44430 dctP12; C4-dicarboxylate-binding periplasmic protein	K21395 yiaO; TRAP-type transport system periplasmic protein
D      ToN1_44750 dctP13; C4-dicarboxylate-binding periplasmic protein	K21395 yiaO; TRAP-type transport system periplasmic protein
D      ToN1_50030 dctP14; C4-dicarboxylate-binding periplasmic protein	K21395 yiaO; TRAP-type transport system periplasmic protein
D      ToN1_50560 dctP15; C4-dicarboxylate-binding periplasmic protein	K21395 yiaO; TRAP-type transport system periplasmic protein
D      ToN1_42200 arsA; Arsenical pump-driving ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      ToN1_42210 arsB; Arsenical-resistance protein	K03325 ACR3; arsenite transporter
D      ToN1_41230 phaAB; Monovalent cation/proton antiporter, fusion-subunit A/B	K05559 phaA; multicomponent K+:H+ antiporter subunit A
D      ToN1_41240 phaC3; Monovalent cation/proton antiporter, subunit C	K05560 phaC; multicomponent K+:H+ antiporter subunit C
D      ToN1_41250 phaD; Monovalent cation/proton antiporter, subunit D	K05561 phaD; multicomponent K+:H+ antiporter subunit D
D      ToN1_41260 phaE; Monovalent cation/proton antiporter, subunit E	K05562 phaE; multicomponent K+:H+ antiporter subunit E
D      ToN1_41270 phaF; Monovalent cation/proton antiporter, subunit F	K05563 phaF; multicomponent K+:H+ antiporter subunit F
D      ToN1_41280 phaG; Monovalent cation/proton antiporter, subunit G	K05564 phaG; multicomponent K+:H+ antiporter subunit G
D      ToN1_36620 murJ; Lipid II flippase	K03980 murJ; putative peptidoglycan lipid II flippase
D      ToN1_19920 Membrane transport family protein	K13936 mdcF; malonate transporter and related proteins
D      ToN1_33810 Membrane transport protein	K13936 mdcF; malonate transporter and related proteins
D      ToN1_22040 Membrane transport family protein	K24180 mleP; malate permease and related proteins
D      ToN1_31980 Membrane transport family protein	K24180 mleP; malate permease and related proteins
D      ToN1_29820 kup; putative potassium transport system protein	K03549 kup; KUP system potassium uptake protein
D      ToN1_13530 Amino acid exporter, LysE-like	K06895 lysE; L-lysine exporter family protein LysE/ArgO
D      ToN1_18400 Amino acid exporter protein, LeuE family	K05834 rhtB; homoserine/homoserine lactone efflux protein
D      ToN1_38590 Amino acid exporter family protein, LeuE-type	K11250 leuE; leucine efflux protein
D      ToN1_18780 Branched-chain amino acid transport protein, permease	K26605 azlC; branched chain amino acid efflux pump
D      ToN1_18770 Branched-chain amino acid transport protein	K26606 azlD; branched chain amino acid efflux pump
D      ToN1_25640 Putative tricarboxylic transport membrane protein	K07793 tctA; putative tricarboxylic transport membrane protein
D      ToN1_25630 Putative tricarboxylic transport membrane protein	K07794 tctB; putative tricarboxylic transport membrane protein
D      ToN1_25620 Putative tricarboxylic transport membrane protein	K07795 tctC; putative tricarboxylic transport membrane protein
D      ToN1_17080 ftsW; putative peptidoglycan glycosyltransferase	K03588 ftsW; cell division protein FtsW
D      ToN1_17670 Gdt1 family protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      ToN1_18670 High-affinity iron permease	K07243 FTR; high-affinity iron transporter
D      ToN1_23900 Iron permease family protein, FTR1/Fip1/EfeU-like	K07243 FTR; high-affinity iron transporter
D      ToN1_18640 Periplasmic metal-binding family protein, Tp34-type	K07230 p19; periplasmic iron binding protein
D      ToN1_43400 PQ-loop repeat-containing protein	K15383 K15383; MtN3 and saliva related transmembrane protein
D      ToN1_17860 TonB, C-terminal domain-containing protein	K03832 tonB; periplasmic protein TonB
D      ToN1_18570 tonB; Periplasmic biopolymer transport protein linking inner and outer membranes	K03832 tonB; periplasmic protein TonB
D      ToN1_37060 TonB-like protein	K03832 tonB; periplasmic protein TonB
D      ToN1_22140 pal; Peptidoglycan-associated lipoprotein	K03640 pal; peptidoglycan-associated lipoprotein
D      ToN1_22130 tolB; Tol-Pal system, periplasmic component	K03641 tolB; TolB protein
D      ToN1_25570 mdcA; Malonate decarboxylase, alpha subunit	K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D      ToN1_25550 mdcC; Malonate decarboxylase, acyl carrier protein	K13931 mdcC; malonate decarboxylase delta subunit
D      ToN1_00830 narG; Respiratory nitrate reductase, alpha subunit	K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D      ToN1_00840 narH; Respiratory nitrate reductase, beta subunit	K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D      ToN1_00860 narI; Respiratory nitrate reductase, gamma subunit	K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D      ToN1_24140 ttrA; Tetrathionate reductase, subunit A	K08357 ttrA; tetrathionate reductase subunit A
D      ToN1_24160 ttrB; Tetrathionate reductase, subunit B	K08358 ttrB; tetrathionate reductase subunit B
D      ToN1_24150 ttrC; Tetrathionate reductase, subunit C	K08359 ttrC; tetrathionate reductase subunit C
D      ToN1_07080 cmdA; p-Cymene dehydrogenase, alpha subunit	K24713 s25dA; steroid C-25 hydroxylase alpha subunit [EC:1.17.99.10]
D      ToN1_07090 cmdB; p-Cymene dehydrogenase, beta subunit	K24714 s25dB; steroid C-25 hydroxylase beta subunit [EC:1.17.99.10]
D      ToN1_07100 cmdC; p-Cymene dehydrogenase, gamma subunit	K24715 s25dC; steroid C-25 hydroxylase gamma subunit
D      ToN1_01890 RND efflux pump membrane fusion protein, barrel-sandwich domain-containing	K03543 emrA; membrane fusion protein, multidrug efflux system
D      ToN1_27240 Type I secretion membrane fusion protein, HlyD family	K12537 hasE; membrane fusion protein, type I secretion system
D      ToN1_03020 Uncharacterized protein	K15727 czcB; membrane fusion protein, heavy metal efflux system
D      ToN1_18880 RND family efflux transporter, CusF-related	K07798 cusB; membrane fusion protein, copper/silver efflux system
D      ToN1_09180 putative secretion protein	K11003 hlyD; membrane fusion protein, hemolysin D
D      ToN1_18320 Type I secretion membrane fusion protein, HlyD family	K12542 lapC; membrane fusion protein, adhesin transport system
D      ToN1_04580 RND efflux system, membrane fusion protein	K18901 bpeE; membrane fusion protein, multidrug efflux system
D      ToN1_17610 RND efflux system, membrane fusion protein	K18302 mexJ; membrane fusion protein, multidrug efflux system
D      ToN1_14080 RND efflux system, membrane fusion protein	K03585 acrA; membrane fusion protein, multidrug efflux system
D      ToN1_39170 RND efflux system, MFP subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      ToN1_19080 RND efflux system, membrane fusion protein	K21137 triB; membrane fusion protein, multidrug efflux system
D      ToN1_18600 RND efflux system, membrane fusion protein	K13888 macA; membrane fusion protein, macrolide-specific efflux system
D      ToN1_34720 putative exopolysaccharide biosynthesis protein	K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D      ToN1_16030 AAA domain-containing protein	K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D      ToN1_16040 Polysaccharide chain length determinant protein	K25590 epsF; protein tyrosine kinase modulator
D      ToN1_34710 Chain length determinant family protein	K25590 epsF; protein tyrosine kinase modulator
D      ToN1_01720 Cytochrome c-type biogenesis protein	K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D      ToN1_27890 ccmF; Cytochrome c-type biogenesis protein	K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D      ToN1_12700 uraH; 5-hydroxyisourate hydrolase	K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D      ToN1_47110 Uncharacterized protein	K07274 mipA; MipA family protein
C    02044 Secretion system [BR:apet02044]
D      ToN1_09160 Fusion of ABC transporter-type transmembrane and ATP binding protein	K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D      ToN1_09180 putative secretion protein	K11003 hlyD; membrane fusion protein, hemolysin D
D      ToN1_17570 Type I secretion outer membrane protein, TolC family	K12340 tolC; outer membrane protein
D      ToN1_27250 Proteases secretion ATP-binding protein D	K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D      ToN1_27240 Type I secretion membrane fusion protein, HlyD family	K12537 hasE; membrane fusion protein, type I secretion system
D      ToN1_18330 ABC transporter, ATP-binding and permease fusion protein	K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D      ToN1_18320 Type I secretion membrane fusion protein, HlyD family	K12542 lapC; membrane fusion protein, adhesin transport system
D      ToN1_18270 Type I secretion outer membrane family protein, TolC	K12543 lapE; outer membrane protein, adhesin transport system
D      ToN1_16010 General secretion pathway protein	K02450 gspA; general secretion pathway protein A
D      ToN1_12920 Putative general secretion pathway protein	K02450 gspA; general secretion pathway protein A
D      ToN1_12930 Uncharacterized protein	K02451 gspB; general secretion pathway protein B
D      ToN1_11820 General secretion pathway protein D	K02453 gspD; general secretion pathway protein D
D      ToN1_11880 Type II secretion system protein E	K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D      ToN1_11890 Type II secretion system protein F	K02455 gspF; general secretion pathway protein F
D      ToN1_11800 Putative type II secretion system protein G	K02456 gspG; general secretion pathway protein G
D      ToN1_11810 General secretion pathway protein G	K02456 gspG; general secretion pathway protein G
D      ToN1_27360 Type II secretion system protein G	K02456 gspG; general secretion pathway protein G
D      ToN1_27420 Putative type II secretion system protein G	K02456 gspG; general secretion pathway protein G
D      ToN1_27430 Putative type II secretion system protein G	K02456 gspG; general secretion pathway protein G
D      ToN1_15500 pilD; Type IV prepilin-like proteins leader peptide-processing enzyme	K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D      ToN1_18900 pilA; Tfp structural protein	K02650 pilA; type IV pilus assembly protein PilA
D      ToN1_15480 pilB; Type IV fimbrial assembly protein	K02652 pilB; type IV pilus assembly protein PilB
D      ToN1_15490 pilC; Type IV fimbrial assembly protein	K02653 pilC; type IV pilus assembly protein PilC
D      ToN1_23100 Putative type IV pilus assembly protein PilE	K02655 pilE; type IV pilus assembly protein PilE
D      ToN1_36780 Putative type IV pilin	K02655 pilE; type IV pilus assembly protein PilE
D      ToN1_33160 pilF; Type IV pilus biogenesis/stability family protein	K02656 pilF; type IV pilus assembly protein PilF
D      ToN1_17950 pilG; Type IV pilus response regulator, CheY-like	K02657 pilG; twitching motility two-component system response regulator PilG
D      ToN1_17960 pilH; Type IV pilus response regulator, CheY-likeT	K02658 pilH; twitching motility two-component system response regulator PilH
D      ToN1_17970 pilI; Twitching motility protein	K02659 pilI; twitching motility protein PilI
D      ToN1_17980 pilJ; Twitching motility transmembrane protein	K02660 pilJ; twitching motility protein PilJ
D      ToN1_21400 pilM; Type IV fimbrial biogenesis protein	K02662 pilM; type IV pilus assembly protein PilM
D      ToN1_21390 pilN; Type IV fimbrial biogenesis protein	K02663 pilN; type IV pilus assembly protein PilN
D      ToN1_21380 pilO; Type IV fimbrial biogenesis protein	K02664 pilO; type IV pilus assembly protein PilO
D      ToN1_21370 pilP; Type IV fimbrial biogenesis protein	K02665 pilP; type IV pilus assembly protein PilP
D      ToN1_21360 pilQ; Fimbrial assembly protein	K02666 pilQ; type IV pilus assembly protein PilQ
D      ToN1_18100 pilT; Twitching motility protein	K02669 pilT; twitching motility protein PilT
D      ToN1_18110 pilU; Twitching motility protein	K02670 pilU; twitching motility protein PilU
D      ToN1_09620 Twitching motility family protein	K02670 pilU; twitching motility protein PilU
D      ToN1_32650 putative twitching mobility protein	K02670 pilU; twitching motility protein PilU
D      ToN1_23080 Uncharacterized protein	K02671 pilV; type IV pilus assembly protein PilV
D      ToN1_36760 Uncharacterized protein	K02671 pilV; type IV pilus assembly protein PilV
D      ToN1_23070 Type IV Pilus-assembly family protein	K02672 pilW; type IV pilus assembly protein PilW
D      ToN1_36750 Putative type IV pilus assembly protein	K02672 pilW; type IV pilus assembly protein PilW
D      ToN1_23060 Uncharacterized protein	K02673 pilX; type IV pilus assembly protein PilX
D      ToN1_23050 PilC beta-propeller domain-containing protein	K02674 pilY1; type IV pilus assembly protein PilY1
D      ToN1_36730 PilC beta-propeller domain-containing protein	K02674 pilY1; type IV pilus assembly protein PilY1
D      ToN1_39730 PilZ domain-containing protein	K02676 pilZ; type IV pilus assembly protein PilZ
D      ToN1_23090 Putative type II secretion system protein H	K08084 fimT; type IV fimbrial biogenesis protein FimT
D      ToN1_36720 Putative type II secretion system protein	K08084 fimT; type IV fimbrial biogenesis protein FimT
D      ToN1_36770 Putative type II secretion system protein	K08084 fimT; type IV fimbrial biogenesis protein FimT
D      ToN1_33000 Uncharacterized protein	K08086 fimV; pilus assembly protein FimV
D      ToN1_37590 FimV-like protein	K08086 fimV; pilus assembly protein FimV
D      ToN1_20400 Type IV prepilin peptidase	K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D      ToN1_20420 Pilus assambly protein	K02279 cpaB; pilus assembly protein CpaB
D      ToN1_20430 Type II/III secretion system family protein	K02280 cpaC; pilus assembly protein CpaC
D      ToN1_20480 Response regulator receiver domain protein	K02282 cpaE; pilus assembly protein CpaE
D      ToN1_20490 putative secretion ATPase protein, similar to bacterial type II/IV secretion system protein	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D      ToN1_20500 Type II secretion system F domain-containing protein	K12510 tadB; tight adherence protein B
D      ToN1_20510 Type II secretion system F domain protein	K12511 tadC; tight adherence protein C
D      ToN1_20370 Flp/Fap pilin component family protein	K02651 flp; pilus assembly protein Flp/PilA
D      ToN1_20380 Flp/Fap pilin component family protein	K02651 flp; pilus assembly protein Flp/PilA
D      ToN1_20390 Flp/Fap pilin component family protein	K02651 flp; pilus assembly protein Flp/PilA
D      ToN1_18070 CCB3/YggT-containing protein	K02221 yggT; YggT family protein
D      ToN1_46210 DNA internalization-related competence protein	K02238 comEC; competence protein ComEC
D      ToN1_14830 flhA; Flagellar biosynthetis protein	K02400 flhA; flagellar biosynthesis protein FlhA
D      ToN1_14840 flhB; Flagellar biosynthetis protein	K02401 flhB; flagellar biosynthesis protein FlhB
D      ToN1_40110 Flagellar related protein	K04061 flhB2; flagellar biosynthesis protein
D      ToN1_40060 fliF; Flagellar M-ring protein	K02409 fliF; flagellar M-ring protein FliF
D      ToN1_40040 fliH; Flagellar assembly protein FliH	K02411 fliH; flagellar assembly protein FliH
D      ToN1_40030 fliI; Flagellar protein export ATPase	K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D      ToN1_39980 fliN; Flagellar motor switch protein	K02417 fliN; flagellar motor switch protein FliN
D      ToN1_39970 fliO; Flagellar biosynthetic protein	K02418 fliO; flagellar protein FliO/FliZ
D      ToN1_39960 fliP; Flagellar biosynthetic protein	K02419 fliP; flagellar biosynthesis protein FliP
D      ToN1_39950 fliQ; Flagellar biosynthetic protein	K02420 fliQ; flagellar biosynthesis protein FliQ
D      ToN1_39940 fliR; Flagellar biosynthetic protein	K02421 fliR; flagellar biosynthesis protein FliR
D      ToN1_05890 Putative chromosome partitioning related protein	K12055 K12055; chromosome partitioning related protein ParA
D      ToN1_07550 Putative chromosome partitioning related protein	K12055 K12055; chromosome partitioning related protein ParA
D      ToN1_07560 Putative conjugative relaxase	K12070 traI; conjugal transfer pilus assembly protein TraI
D      ToN1_07630 Conjugative coupling factor TraG/TraD	K12071 traD; conjugal transfer pilus assembly protein TraD
D      ToN1_07790 putative thiol:disulfide interchange protein	K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D      ToN1_31460 Thiol:disulfide interchange protein	K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D      ToN1_30000 Outer membrane lipase/esterase	K12686 apeE; outer membrane lipase/esterase
D      ToN1_15380 Type VI secretion system protein	K11891 impL; type VI secretion system protein ImpL
D      ToN1_10780 Putative type VI secretion system protein, ImpK	K11892 impK; type VI secretion system protein ImpK
D      ToN1_10770 Putative type VI secretion system protein, ImpJ	K11893 impJ; type VI secretion system protein ImpJ
D      ToN1_10680 Putative type VI secretion system protein, ImpH	K11895 impH; type VI secretion system protein ImpH
D      ToN1_10690 Putative type VI secretion system protein, ImpG	K11896 impG; type VI secretion system protein ImpG
D      ToN1_10700 Putative type VI secretion system protein, ImpF	K11897 impF; type VI secretion system protein ImpF
D      ToN1_10720 Putative type VI secretion system protein, ImpC	K11900 impC; type VI secretion system protein ImpC
D      ToN1_10730 Putative type VI secretion system protein, ImpB	K11901 impB; type VI secretion system protein ImpB
D      ToN1_15410 Type VI secretion system-associated protein, ImpA family	K11902 impA; type VI secretion system protein ImpA
D      ToN1_10710 Putative type VI secretion system secreted protein, Hcp	K11903 hcp; type VI secretion system secreted protein Hcp
D      ToN1_17630 Type VI secretion system, RhsGE-associated Vgr protein	K11904 vgrG; type VI secretion system secreted protein VgrG
D      ToN1_10790 Putative type VI secretion system secreted protein, VgrG	K11904 vgrG; type VI secretion system secreted protein VgrG
D      ToN1_25930 Rhs element Vgr protein	K11904 vgrG; type VI secretion system secreted protein VgrG
D      ToN1_27150 Putative type VI secretion system secretet protein VgrGA	K11904 vgrG; type VI secretion system secreted protein VgrG
D      ToN1_10760 Putative type VI secretion system protein, VasD	K11906 vasD; type VI secretion system protein VasD
D      ToN1_10670 clpB1; Chaperone protein	K11907 vasG; type VI secretion system protein VasG
D      ToN1_15390 Type VI secretion system-associated protein	K11890 impM; type VI secretion system protein ImpM
D      ToN1_16970 secA; Protein translocase, subunit A	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      ToN1_35310 secB; Protein-export protein	K03071 secB; preprotein translocase subunit SecB
D      ToN1_16880 secD; Protein translocase, subunit D	K03072 secD; preprotein translocase subunit SecD
D      ToN1_19790 secE; Protein translocase, subunit SecE	K03073 secE; preprotein translocase subunit SecE
D      ToN1_16890 secF; Protein-export membrane protein F	K03074 secF; preprotein translocase subunit SecF
D      ToN1_38040 secG; Protein-export membrane protein	K03075 secG; preprotein translocase subunit SecG
D      ToN1_19460 secY; Protein translocase subunit	K03076 secY; preprotein translocase subunit SecY
D      ToN1_15460 ffh; Signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      ToN1_31930 Signal recognition particle receptor FtsY	K03110 ftsY; fused signal recognition particle receptor
D      ToN1_16870 yajC; Preprotein translocase, subunit C	K03210 yajC; preprotein translocase subunit YajC
D      ToN1_25360 yidC; Membrane protein insertase	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      ToN1_32950 tatA; Sec-independent protein translocase protein	K03116 tatA; sec-independent protein translocase protein TatA
D      ToN1_32960 tatB; Sec-independent protein translocase protein	K03117 tatB; sec-independent protein translocase protein TatB
D      ToN1_32970 tatC; Sec-independent protein translocase protein	K03118 tatC; sec-independent protein translocase protein TatC
C    02042 Bacterial toxins [BR:apet02042]
D      ToN1_16810 Transporter-associated domain-containing protein	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      ToN1_49490 CNNM family protein	K03699 tlyC; magnesium and cobalt exporter, CNNM family
C    02022 Two-component system [BR:apet02022]
D      ToN1_24370 phoR; Phosphate regulon sensor protein	K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D      ToN1_24380 phoB; Phosphate regulon transcriptional regulatory protein	K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D      ToN1_44340 Two component system response regulator, CheY-like superfamily	K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D      ToN1_45870 Two component system sensor histidine kinase	K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D      ToN1_45880 Two component system response regulator, OmpR family	K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D      ToN1_18820 Two component system sensor histidine kinase	K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D      ToN1_18830 Two component system response regulator, CheY-like superfamily	K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D      ToN1_25610 Two component system sensor histidine kinase	K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D      ToN1_25600 Two component system response regulator, CheY-like superfamily	K07774 tctD; two-component system, OmpR family, response regulator TctD
D      ToN1_13940 qseC; Two component system sensor histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      ToN1_13890 Two component system response regulator, CheY-like superfamily	K02483 K02483; two-component system, OmpR family, response regulator
D      ToN1_14360 Two component system response regulator, OmpR/PhoB family	K02483 K02483; two-component system, OmpR family, response regulator
D      ToN1_20140 Two component system DNA-binding response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      ToN1_13930 qseB; Two component system response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      ToN1_11280 Two component system sensor response regulator, CheY-like superfamily	K02483 K02483; two-component system, OmpR family, response regulator
D      ToN1_34050 Putative two component system response regulator	K02483 K02483; two-component system, OmpR family, response regulator
D      ToN1_48500 Response regulator receiver domain-containing protein	K02483 K02483; two-component system, OmpR family, response regulator
D      ToN1_00870 narQ; Nitrate/nitrite sensor protein	K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D      ToN1_27750 narX; Nitrate/nitrite sensor histidine kinase	K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D      ToN1_00880 narP; Nitrate/nitrite response regulator protein	K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D      ToN1_20330 Putative two component system response regulator	K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D      ToN1_27760 narL; Nitrate/nitrite response regulator protein	K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D      ToN1_21000 Histidine kinase	K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D      ToN1_41060 Two component system sensor histidine kinase	K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D      ToN1_20990 Transcriptional regulator, LuxR family	K20264 fusR; two-component system, NarL family, response regulator FusR
D      ToN1_13110 Transcriptional regulator, LuxR family	K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D      ToN1_41050 Two component system response regulator, LuxR family	K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D      ToN1_41610 Transcriptional regulator, LuxR family	K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D      ToN1_49330 Two component system sensor histidine kinase	K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D      ToN1_36790 Putative two component system sensor histidine kinase	K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D      ToN1_34420 Two component system response regulator, CheY-like superfamily	K08083 algR; two-component system, LytTR family, response regulator AlgR
D      ToN1_31590 ntrB; Nitrogen assimilation sensor kinase	K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D      ToN1_31580 ntrC; DNA-binding transcriptional regulator NtrC	K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D      ToN1_25420 Two component system sensor histidine kinase	K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D      ToN1_25430 Two component system response regulator, sigma-54 specific	K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D      ToN1_08580 Two component system sensor histidine kinase	K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D      ToN1_27330 Two component system sensor histidine kinase	K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D      ToN1_17710 PAS modulated transcriptional regulator, sigma-54-specific (Fis-type)	K07713 zraR; two-component system, NtrC family, response regulator HydG
D      ToN1_27340 Two component system response regulator, sigma54-specific	K07714 atoC; two-component system, NtrC family, response regulator AtoC
D      ToN1_27970 Two component system response regulator, sigma54-specific	K07714 atoC; two-component system, NtrC family, response regulator AtoC
D      ToN1_42220 Two component system response regulator	K07714 atoC; two-component system, NtrC family, response regulator AtoC
D      ToN1_18930 Two component system sensor histidine kinase	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      ToN1_18920 Two component system response regulator, sigma54-specific	K02667 pilR; two-component system, NtrC family, response regulator PilR
D      ToN1_35780 Two component system sensor histidine kinase	K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D      ToN1_35760 Two component system response regulator, CheY-like superfamily	K07715 glrR; two-component system, NtrC family, response regulator GlrR
D      ToN1_25890 Two component system, sensor histidine kinase	K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D      ToN1_25860 hoxA; Hydrogenase transcriptional regulatory protein	K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D      ToN1_25850 hoxX; Hydrogenase maturation factor	K19640 hypX; putative two-component system protein, hydrogenase maturation factor HypX/HoxX
D      ToN1_22180 Two component system sensor histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_24820 Two component system sensor histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_27980 Two component system sensor histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_33880 Putative two component system histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_33940 Putative two component system histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_33960 Putative two component system histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_33980 Putative two component system histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_42230 Two component system sensor histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_48310 Putative two component system sensor histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_48360 Putative response regulator receiver modulated diguanylate cyclase/phosphodiesterase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_48380 Putative signal transduction histidine kinase	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_48410 Signal transduction histidine kinase, PAS domain-containing	K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D      ToN1_12100 Two component signal transduction response regulator, PEP-CTERM system	K02481 flgR; two-component system, NtrC family, response regulator
D      ToN1_36400 Chemotaxis protein, CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      ToN1_36380 cheY; Chemotaxis protein CheY	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      ToN1_36350 Protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      ToN1_36360 Chemotaxis protein CheV-like	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      ToN1_36370 Chemotaxis protein CheV-like	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      ToN1_17990 pilL; Type IV pilus hybrid sensor kinase/response regulator	K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D      ToN1_17950 pilG; Type IV pilus response regulator, CheY-like	K02657 pilG; twitching motility two-component system response regulator PilG
D      ToN1_17960 pilH; Type IV pilus response regulator, CheY-likeT	K02658 pilH; twitching motility two-component system response regulator PilH
D      ToN1_09060 Two component system response regulator, CheY-like	K11443 divK; two-component system, cell cycle response regulator DivK
D      ToN1_48490 Response regulator receiver domain-containing protein	K11443 divK; two-component system, cell cycle response regulator DivK
D      ToN1_16750 dctS; Two component system sensor histidine kinase	K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D      ToN1_16760 dctR; Two component transcriptional regulator, LuxR family	K11712 dctR; two-component system, LuxR family, response regulator DctR
D      ToN1_24110 Two component system histidine kinase	K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D      ToN1_28980 Two component system sensor histidine kinase	K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D      ToN1_24120 Two component system response regulator, LuxR-like superfamily	K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D      ToN1_28990 Two component transcriptional regulator, LuxR family	K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D      ToN1_48230 Signal transduction response regulator, LuxR family	K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D      ToN1_48290 Putative two component system response regulator	K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D      ToN1_48430 Signal transduction response regulator, LuxR family	K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D      ToN1_40070 Two component system sensor histidine kinase	K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D      ToN1_40080 Two component system response regulator, CheY-like superfamily	K10943 flrC; two-component system, response regulator FlrC
D      ToN1_12410 dctD; C4-dicarboxylate transport transcriptional regulatory protein	K17061 aauR; two-component system, response regulator AauR
D      ToN1_38580 Two component system response regulator	K13815 rpfG; two-component system, response regulator RpfG
D      ToN1_00910 Putative two component system sensory histidine kinase	K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D      ToN1_00900 Putative two component system response regulator	K15012 regA; two-component system, response regulator RegA
D      ToN1_19900 Two component system fusion protein (sensory histidine kinase and response regulator, CheY-like)	K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D      ToN1_38570 HPt (histidine-containing phosphotransfer) domain-containing protein	K20976 hptB; histidine phosphotransfer protein HptB
D      ToN1_33320 Transcriptional regulator, LuxR family	K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D      ToN1_24060 Two component system fusion protein (sensory histidine kinase and response regulator)	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D      ToN1_33060 Two component system fusion protein (sensory histidine kinase and response regulator)	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D      ToN1_33840 Putative two component system histidine kinase	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D      ToN1_33850 Two component system fusion protein (sensory histidine kinase and response regulator)	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D      ToN1_44000 Two component system fusion protein (sensory histidine kinase and response regulator)	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D      ToN1_47330 Putative two component system sensor histidine kinase	K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C    02035 Bacterial motility proteins [BR:apet02035]
D      ToN1_36400 Chemotaxis protein, CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      ToN1_36340 Chemotaxis receptor methyltransferase	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      ToN1_36350 Protein-glutamate methylesterase	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      ToN1_36380 cheY; Chemotaxis protein CheY	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      ToN1_36390 Chemotaxis protein, CheZ	K03414 cheZ; chemotaxis protein CheZ
D      ToN1_36360 Chemotaxis protein CheV-like	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      ToN1_36370 Chemotaxis protein CheV-like	K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D      ToN1_03660 Chemotaxis methyl-accepting receptor family protein, Tar-related	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_19030 Chemotaxis methyl-accepting receptor family protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_23370 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_23870 Methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_24000 Methyl-accepting chemotaxis sensory transducer, single cache domain-containing	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_08750 Methyl-accepting chemotaxis protein (MCP)	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_10380 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_27070 Methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_36150 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_38340 putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_40270 Putative methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_46990 Methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      ToN1_40040 fliH; Flagellar assembly protein FliH	K02411 fliH; flagellar assembly protein FliH
D      ToN1_40030 fliI; Flagellar protein export ATPase	K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D      ToN1_40020 fliJ; Flagellar export protein	K02413 fliJ; flagellar protein FliJ
D      ToN1_39970 fliO; Flagellar biosynthetic protein	K02418 fliO; flagellar protein FliO/FliZ
D      ToN1_39960 fliP; Flagellar biosynthetic protein	K02419 fliP; flagellar biosynthesis protein FliP
D      ToN1_39950 fliQ; Flagellar biosynthetic protein	K02420 fliQ; flagellar biosynthesis protein FliQ
D      ToN1_39940 fliR; Flagellar biosynthetic protein	K02421 fliR; flagellar biosynthesis protein FliR
D      ToN1_14830 flhA; Flagellar biosynthetis protein	K02400 flhA; flagellar biosynthesis protein FlhA
D      ToN1_14840 flhB; Flagellar biosynthetis protein	K02401 flhB; flagellar biosynthesis protein FlhB
D      ToN1_40050 fliG; Flagellar motor switch protein	K02410 fliG; flagellar motor switch protein FliG
D      ToN1_39990 fliM; Flagellar motor switch protein	K02416 fliM; flagellar motor switch protein FliM
D      ToN1_39980 fliN; Flagellar motor switch protein	K02417 fliN; flagellar motor switch protein FliN
D      ToN1_40060 fliF; Flagellar M-ring protein	K02409 fliF; flagellar M-ring protein FliF
D      ToN1_39890 flgI; Flagellar P-ring protein	K02394 flgI; flagellar P-ring protein FlgI
D      ToN1_39810 flgA; Flagella basal body P-ring formation protein FlgA	K02386 flgA; flagellar basal body P-ring formation protein FlgA
D      ToN1_39880 flgH; Flagellar L-ring protein	K02393 flgH; flagellar L-ring protein FlgH
D      ToN1_40000 fliL; Flagellar protein	K02415 fliL; flagellar protein FliL
D      ToN1_40090 fliE; Flagellar hook-basal body complex protein	K02408 fliE; flagellar hook-basal body complex protein FliE
D      ToN1_40010 Putative flagellar hook-length control protein FliK	K02414 fliK; flagellar hook-length control protein FliK
D      ToN1_39820 flgB; Flagellar basal body rod protein	K02387 flgB; flagellar basal-body rod protein FlgB
D      ToN1_39830 flgC; Flagellar basal-body rod protein	K02388 flgC; flagellar basal-body rod protein FlgC
D      ToN1_39840 flgD; Flagellar basal-body rod protein	K02389 flgD; flagellar basal-body rod modification protein FlgD
D      ToN1_39860 flgF; Flagellar basal-body rod protein	K02391 flgF; flagellar basal-body rod protein FlgF
D      ToN1_39870 flgG; Flagellar basal-body rod protein	K02392 flgG; flagellar basal-body rod protein FlgG
D      ToN1_39900 flgJ; Flagellar rod assembly protein	K02395 flgJ; peptidoglycan hydrolase FlgJ
D      ToN1_39850 flgE; Flagellar basal-body rod protein	K02390 flgE; flagellar hook protein FlgE
D      ToN1_39910 flgK; Flagellar hook-associated protein 1	K02396 flgK; flagellar hook-associated protein 1
D      ToN1_39920 flgL; Flagellar hook-associated protein 3	K02397 flgL; flagellar hook-associated protein 3 FlgL
D      ToN1_39790 Putative chaperon of flagellar synthesis	K02399 flgN; flagellar biosynthesis protein FlgN
D      ToN1_40170 Flagellin domain-containing protein	K02406 fliC; flagellin
D      ToN1_40150 fliD; Flagellar hook-associated protein 2	K02407 fliD; flagellar hook-associated protein 2
D      ToN1_40140 fliS; Flagellar secretion chaperone	K02422 fliS; flagellar secretion chaperone FliS
D      ToN1_40130 fliT; Flagellar protein	K02423 fliT; flagellar protein FliT
D      ToN1_36290 flhD; Flagellar transcriptional regulator	K02403 flhD; flagellar transcriptional activator FlhD
D      ToN1_36300 flhC; Flagellar transcriptional regulator	K02402 flhC; flagellar transcriptional activator FlhC
D      ToN1_14800 fliA; RNA polymerase sigma factor	K02405 fliA; RNA polymerase sigma factor FliA
D      ToN1_14790 motA1; Flagellar motor protein A	K02556 motA; chemotaxis protein MotA
D      ToN1_36320 motA2; Flagellar motor protein	K02556 motA; chemotaxis protein MotA
D      ToN1_14780 motB1; Flagellar motor protein B	K02557 motB; chemotaxis protein MotB
D      ToN1_36330 motB2; Flagellar motor protein	K02557 motB; chemotaxis protein MotB
D      ToN1_40070 Two component system sensor histidine kinase	K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D      ToN1_40080 Two component system response regulator, CheY-like superfamily	K10943 flrC; two-component system, response regulator FlrC
D      ToN1_21590 fliW; Flagellar assembly factor	K13626 fliW; flagellar assembly factor FliW
D      ToN1_39800 Anti-sigma-28 factor, FlgM family	K02398 flgM; negative regulator of flagellin synthesis FlgM
D      ToN1_40160 FlaG family protein	K06603 flaG; flagellar protein FlaG
D      ToN1_48440 Uncharacterized protein	K06603 flaG; flagellar protein FlaG
D      ToN1_14820 flhF; Flagellar biosynthetis protein	K02404 flhF; flagellar biosynthesis protein FlhF
D      ToN1_14810 Putative flagellar biosynthesis protein	K04562 flhG; flagellar biosynthesis protein FlhG
D      ToN1_17950 pilG; Type IV pilus response regulator, CheY-like	K02657 pilG; twitching motility two-component system response regulator PilG
D      ToN1_17960 pilH; Type IV pilus response regulator, CheY-likeT	K02658 pilH; twitching motility two-component system response regulator PilH
D      ToN1_17970 pilI; Twitching motility protein	K02659 pilI; twitching motility protein PilI
D      ToN1_17980 pilJ; Twitching motility transmembrane protein	K02660 pilJ; twitching motility protein PilJ
D      ToN1_17990 pilL; Type IV pilus hybrid sensor kinase/response regulator	K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D      ToN1_18920 Two component system response regulator, sigma54-specific	K02667 pilR; two-component system, NtrC family, response regulator PilR
D      ToN1_18930 Two component system sensor histidine kinase	K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D      ToN1_18100 pilT; Twitching motility protein	K02669 pilT; twitching motility protein PilT
D      ToN1_18110 pilU; Twitching motility protein	K02670 pilU; twitching motility protein PilU
D      ToN1_09620 Twitching motility family protein	K02670 pilU; twitching motility protein PilU
D      ToN1_32650 putative twitching mobility protein	K02670 pilU; twitching motility protein PilU
D      ToN1_18900 pilA; Tfp structural protein	K02650 pilA; type IV pilus assembly protein PilA
D      ToN1_15480 pilB; Type IV fimbrial assembly protein	K02652 pilB; type IV pilus assembly protein PilB
D      ToN1_15490 pilC; Type IV fimbrial assembly protein	K02653 pilC; type IV pilus assembly protein PilC
D      ToN1_15500 pilD; Type IV prepilin-like proteins leader peptide-processing enzyme	K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D      ToN1_33160 pilF; Type IV pilus biogenesis/stability family protein	K02656 pilF; type IV pilus assembly protein PilF
D      ToN1_21360 pilQ; Fimbrial assembly protein	K02666 pilQ; type IV pilus assembly protein PilQ
D      ToN1_21370 pilP; Type IV fimbrial biogenesis protein	K02665 pilP; type IV pilus assembly protein PilP
D      ToN1_21380 pilO; Type IV fimbrial biogenesis protein	K02664 pilO; type IV pilus assembly protein PilO
D      ToN1_21390 pilN; Type IV fimbrial biogenesis protein	K02663 pilN; type IV pilus assembly protein PilN
D      ToN1_21400 pilM; Type IV fimbrial biogenesis protein	K02662 pilM; type IV pilus assembly protein PilM
D      ToN1_39730 PilZ domain-containing protein	K02676 pilZ; type IV pilus assembly protein PilZ
D      ToN1_23080 Uncharacterized protein	K02671 pilV; type IV pilus assembly protein PilV
D      ToN1_36760 Uncharacterized protein	K02671 pilV; type IV pilus assembly protein PilV
D      ToN1_23070 Type IV Pilus-assembly family protein	K02672 pilW; type IV pilus assembly protein PilW
D      ToN1_36750 Putative type IV pilus assembly protein	K02672 pilW; type IV pilus assembly protein PilW
D      ToN1_23060 Uncharacterized protein	K02673 pilX; type IV pilus assembly protein PilX
D      ToN1_23050 PilC beta-propeller domain-containing protein	K02674 pilY1; type IV pilus assembly protein PilY1
D      ToN1_36730 PilC beta-propeller domain-containing protein	K02674 pilY1; type IV pilus assembly protein PilY1
D      ToN1_23100 Putative type IV pilus assembly protein PilE	K02655 pilE; type IV pilus assembly protein PilE
D      ToN1_36780 Putative type IV pilin	K02655 pilE; type IV pilus assembly protein PilE
D      ToN1_20370 Flp/Fap pilin component family protein	K02651 flp; pilus assembly protein Flp/PilA
D      ToN1_20380 Flp/Fap pilin component family protein	K02651 flp; pilus assembly protein Flp/PilA
D      ToN1_20390 Flp/Fap pilin component family protein	K02651 flp; pilus assembly protein Flp/PilA
D      ToN1_20400 Type IV prepilin peptidase	K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D      ToN1_20420 Pilus assambly protein	K02279 cpaB; pilus assembly protein CpaB
D      ToN1_20430 Type II/III secretion system family protein	K02280 cpaC; pilus assembly protein CpaC
D      ToN1_20480 Response regulator receiver domain protein	K02282 cpaE; pilus assembly protein CpaE
D      ToN1_20490 putative secretion ATPase protein, similar to bacterial type II/IV secretion system protein	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C    03037 Cilium and associated proteins
C    04812 Cytoskeleton proteins [BR:apet04812]
D      ToN1_45590 MEMO1 family protein	K06990 MEMO1; MEMO1 family protein
D      ToN1_24300 mreB; Cell shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins
D      ToN1_17020 ftsZ; Cell division protein	K03531 ftsZ; cell division protein FtsZ
D      ToN1_17030 ftsA; Cell division protein	K03590 ftsA; cell division protein FtsA
D      ToN1_08720 minC; Septum site-determining protein	K03610 minC; septum site-determining protein MinC
D      ToN1_08730 minD; Septum site-determining protein	K03609 minD; septum site-determining protein MinD
D      ToN1_08740 minE; Cell division topological specificity factor	K03608 minE; cell division topological specificity factor
D      ToN1_24530 putative chromosome segregation ATPase	K03496 parA; chromosome partitioning protein
D      ToN1_10460 Putative chromosome partitioning protein ParA	K03496 parA; chromosome partitioning protein
D      ToN1_24520 putative chromosome partitioning protein, ParB-like	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C    04147 Exosome [BR:apet04147]
D      ToN1_47270 htpG; Chaperone protein	K04079 HSP90A; molecular chaperone HtpG
D      ToN1_43420 eno1; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_46510 eno2; Enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      ToN1_02860 gap1; Glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      ToN1_35060 gap2; Glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      ToN1_02870 pgk1; Phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      ToN1_35050 pgk2; Phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      ToN1_13250 pyk1; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_35010 pyk2; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_43450 pyk3; Pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      ToN1_37740 ppiA; Peptidyl-prolyl cis-trans isomerase A	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      ToN1_44470 Peptidase, M19 family	K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D      ToN1_10400 ahpC2; Alkyl hydroperoxide reductase C	K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D      ToN1_34030 groL1; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_40660 groL2; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_41470 groL3; 60 kDa chaperonin	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      ToN1_37790 dnaK; Chaperone protein	K04043 dnaK; molecular chaperone DnaK
D      ToN1_40690 dnaK3; Chaperone protein	K04043 dnaK; molecular chaperone DnaK
D      ToN1_43530 pgi; Glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      ToN1_47860 guaB; Inosine-5'-monophosphate dehydrogenase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      ToN1_19680 tuf1; Elongation factor Tu	K02358 tuf; elongation factor Tu
D      ToN1_19800 tuf2; Elongation factor Tu	K02358 tuf; elongation factor Tu
D      ToN1_09380 Cation-transporting P-type ATPase	K01539 ATP1A; sodium/potassium-transporting ATPase subunit alpha [EC:7.2.2.13]
D      ToN1_17340 Histidine triad (HIT) family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      ToN1_32940 Histidine triad (HIT) family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      ToN1_20000 Long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      ToN1_37460 fadD; Long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      ToN1_04780 putative acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06700 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_06750 tioL; 3-oxoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_21770 fadA; Beta-subunit of fatty acid oxidation complex, 3-keto-acyl-CoA-thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_09310 Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_29890 Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_32160 thlA1; Acetyl-CoA C-acyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_38670 thlA2; Acetyl-CoA acetyltransferase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      ToN1_30360 ahcY; Adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      ToN1_36580 adk; Adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      ToN1_33470 apt; Adenine phosphoribosyltransferase	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      ToN1_34410 argH; Argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      ToN1_36670 argG; Argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      ToN1_43330 hydA; D-hydantoinase	K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D      ToN1_33620 fbp2; Fructose-1,6-bisphosphatase class 1	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      ToN1_11340 glpK; Glycerol kinase	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      ToN1_35230 hemB; Delta-aminolevulinic acid dehydratase	K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D      ToN1_00750 Putative pterin-4-alpha-carbinolamine dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      ToN1_13750 Uncharacterized protein	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      ToN1_04210 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      ToN1_34500 purH; Bifunctional purine biosynthesis protein	K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D      ToN1_38690 M48 family peptidase	K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D      ToN1_21130 lpd; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_40200 Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_47660 lpdA; Dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      ToN1_05540 etfA1; Electron transfer flavoprotein, alpha subunit	K03522 fixB; electron transfer flavoprotein alpha subunit
D      ToN1_06340 etfA2; Electron transfer flavoprotein, alpha subunit	K03522 fixB; electron transfer flavoprotein alpha subunit
D      ToN1_06770 etfA3; Electron transfer flavoprotein, alpha subunit	K03522 fixB; electron transfer flavoprotein alpha subunit
D      ToN1_45810 etfA4; Electron transfer flavoprotein, alpha subunit	K03522 fixB; electron transfer flavoprotein alpha subunit
D      ToN1_12440 NADP-specific glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      ToN1_47000 NADP-specific glutamate dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      ToN1_43500 zwf1; Glucose-6-phosphate 1-dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      ToN1_43970 zwf2; Glucose-6-phosphate 1-dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      ToN1_38030 tpiA; Triosephosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      ToN1_35350 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      ToN1_24010 Outer membrane lipoprotein	K03098 APOD; apolipoprotein D and lipocalin family protein
C    02048 Prokaryotic defense system [BR:apet02048]
D      ToN1_03050 Putative type II restriction enzyme	K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D      ToN1_23490 Putative adenine-specific DNA-methyltransferase	K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D      ToN1_48780 Plasmid stabilization protein	K19092 parE1_3_4; toxin ParE1/3/4
D      ToN1_48790 Putative toxin-antitoxin system antitoxin	K07746 parD1_3_4; antitoxin ParD1/3/4
D      ToN1_48160 mRNA interferase MqsR-like	K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D      ToN1_48150 Type II toxin-antitoxin system antitoxin, MqsA family	K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D      ToN1_17020 ftsZ; Cell division protein	K03531 ftsZ; cell division protein FtsZ
D      ToN1_24300 mreB; Cell shape-determining protein	K03569 mreB; rod shape-determining protein MreB and related proteins
D      ToN1_14750 parC; DNA topoisomerase 4, subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      ToN1_14650 parE; DNA topoisomerase 4 subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      ToN1_49140 gltX; Glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      ToN1_09990 Uncharacterized protein	K19168 cptA; toxin CptA
D      ToN1_47620 sdhE; FAD assembly factor	K09159 cptB; antitoxin CptB
D      ToN1_09720 iscS; Cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      ToN1_09730 Putative cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C    04030 G protein-coupled receptors
C    04050 Cytokine receptors
C    04054 Pattern recognition receptors
C    03310 Nuclear receptors
C    04040 Ion channels
C    04031 GTP-binding proteins
C    04052 Cytokines and neuropeptides
C    04515 Cell adhesion molecules
C    04090 CD molecules
C    01504 Antimicrobial resistance genes [BR:apet01504]
D      ToN1_39400 Virginiamycin B lyase	K18235 vgb; virginiamycin B lyase [EC:4.2.99.-]
D      ToN1_18820 Two component system sensor histidine kinase	K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D      ToN1_18830 Two component system response regulator, CheY-like superfamily	K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D      ToN1_14080 RND efflux system, membrane fusion protein	K03585 acrA; membrane fusion protein, multidrug efflux system
D      ToN1_39170 RND efflux system, MFP subunit	K03585 acrA; membrane fusion protein, multidrug efflux system
D      ToN1_14070 Multidrug efflux transporter	K18138 acrB; multidrug efflux pump
D      ToN1_39180 Efflux pump membrane transporter	K18138 acrB; multidrug efflux pump
D      ToN1_18620 RND efflux system outer membrane lipoprotein, NodT family	K18139 oprM; outer membrane protein, multidrug efflux system
D      ToN1_39190 RND efflux system outer membrane lipoprotein, NodT family	K18139 oprM; outer membrane protein, multidrug efflux system
D      ToN1_17610 RND efflux system, membrane fusion protein	K18302 mexJ; membrane fusion protein, multidrug efflux system
D      ToN1_17600 Efflux transporter, acriflavin resistance protein family	K18303 mexK; multidrug efflux pump
D      ToN1_17570 Type I secretion outer membrane protein, TolC family	K12340 tolC; outer membrane protein
D      ToN1_04600 Transcriptional regulator, LysR family	K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D      ToN1_04580 RND efflux system, membrane fusion protein	K18901 bpeE; membrane fusion protein, multidrug efflux system
D      ToN1_04570 RND efflux system, AcrB TolC docking domain	K18902 bpeF; multidrug efflux pump
D      ToN1_04560 RND efflux system outer membrane lipoprotein, NodT family	K18903 oprC; outer membrane protein, multidrug efflux system
C    00535 Proteoglycans
C    00536 Glycosaminoglycan binding proteins
C    00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:apet00537]
D      ToN1_44130 Glycoside hydrolase family 37 protein	K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D      ToN1_44470 Peptidase, M19 family	K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C    04091 Lectins
C    04990 Domain-containing proteins not elsewhere classified
B
B  09185 Viral protein families
C    03200 Viral proteins
C    03210 Viral fusion proteins
B
B  09184 RNA family
C    03100 Non-coding RNAs [BR:apet03100]
D      ToN1_37401 tRNA-Ala4; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_37404 tRNA-Ala5; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_12153 tRNA-Ala1; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_31433 tRNA-Ala2; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_36003 tRNA-Ala3; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_39763 tRNA-Ala6; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_40331 tRNA-Ala7; tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      ToN1_24051 tRNA-Arg3; tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      ToN1_37232 tRNA-Arg5; tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      ToN1_24052 tRNA-Arg4; tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      ToN1_12051 tRNA-Arg2; tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      ToN1_08151 tRNA-Arg1; tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      ToN1_10161 tRNA-Asn1; tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      ToN1_10162 tRNA-Asn2; tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      ToN1_37403 tRNA-Asp1; tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      ToN1_37406 tRNA-Asp2; tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      ToN1_09782 tRNA-Cys; tRNA-Cys	K14222 tRNA-Cys; tRNA Cys
D      ToN1_31811 tRNA-Gln; tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      ToN1_37402 tRNA-Glu1; tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      ToN1_37405 tRNA-Glu2; tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      ToN1_23631 tRNA-Gly4; tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      ToN1_09781 tRNA-Gly1; tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      ToN1_09783 tRNA-Gly2; tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      ToN1_19802 tRNA-Gly3; tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      ToN1_12154 tRNA-Ile2; tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      ToN1_31432 tRNA-Ile3; tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      ToN1_36002 tRNA-Ile4; tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      ToN1_39762 tRNA-Ile5; tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      ToN1_38041 tRNA-Leu7; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_33291 tRNA-Leu5; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_33292 tRNA-Leu6; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_25181 tRNA-Leu4; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_16841 tRNA-Leu3; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_08441 tRNA-Leu1; tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      ToN1_10661 tRNA-Ile1; tRNA-Ile	K14230 tRNA-Met; tRNA Met
D      ToN1_42981 tRNA-fMet; tRNA-fMet	K14230 tRNA-Met; tRNA Met
D      ToN1_32531 tRNA-Met; tRNA-Met	K14230 tRNA-Met; tRNA Met
D      ToN1_34081 tRNA-Phe; tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      ToN1_08152 tRNA-Pro1; tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      ToN1_11561 tRNA-Pro2; tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      ToN1_15001 tRNA-Pro3; tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      ToN1_44361 tRNA-Ser4; tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      ToN1_14861 tRNA-Ser2; tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      ToN1_37231 tRNA-Ser3; tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      ToN1_14511 tRNA-Ser1; tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      ToN1_10911 tRNA--Thr1; tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      ToN1_19801 tRNA-Thr2; tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      ToN1_19791 tRNA-Trp; tRNA-Trp	K14235 tRNA-Trp; tRNA Trp
D      ToN1_19803 tRNA-Tyr; tRNA-Tyr	K14236 tRNA-Tyr; tRNA Tyr
D      ToN1_39111 tRNA-Val2; tRNA-Val	K14237 tRNA-Val; tRNA Val
D      ToN1_15081 tRNA-Val1; tRNA-Val	K14237 tRNA-Val; tRNA Val
#
A09190 Not Included in Pathway or Brite
B
B  09191 Unclassified: metabolism
C    99980 Enzymes with EC numbers
D      ToN1_20810 Short chain dehydrogenase family protein	K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D      ToN1_31990 NAD(P)-dependent oxidoreductase	K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D      ToN1_23670 Putative pyruvate dehydrogenase E1 component, alpha subunit	K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D      ToN1_32420 Pyruvate dehydrogenase E1 component, alpha subunit	K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D      ToN1_43730 Putative pyruvate dehydrogenase, E1 component	K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D      ToN1_23660 Putative pyruvate dehydrogenase E1 component, beta subunit	K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D      ToN1_32430 Pyruvate dehydrogenase E1 component, beta subunit	K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D      ToN1_43720 Putative pyruvate dehydrogenase	K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D      ToN1_49200 Glucose / Sorbosone dehydrogenase domain-containing protein	K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D      ToN1_00460 Putative 4-hydroxybenzoyl-CoA reductase, gamma subunit	K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D      ToN1_50420 [2Fe-2S] iron-sulfur domain-containing protein	K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D      ToN1_00470 Putative 4-hydroxybenzoyl-CoA reductase, beta subunit	K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D      ToN1_00010 Putative indolepyruvate oxidoreductase, alpha subunit	K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D      ToN1_40280 iorA; Indolepyruvate ferredoxin oxidoreductase, alpha subunit	K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D      ToN1_00020 Putative indolepyruvate oxidoreductase, beta subunit	K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D      ToN1_40290 iorB; Indolepyruvate ferredoxin oxidoreductase, beta subunit	K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D      ToN1_16400 Indolepyruvate ferredoxin oxidoreductase	K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D      ToN1_06360 Indolepyruvate ferredoxin oxidoreductase	K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D      ToN1_19840 Putative indolepyruvate ferredoxin oxidoreductase, alpha subunit	K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D      ToN1_46290 fadH; 2,4-dienoyl-CoA reductase	K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D      ToN1_43610 pqqC; Pyrroloquinoline-quinone synthase	K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D      ToN1_50380 Acyl-CoA dehydrogenase	K25759 iaaF; benzylmalonyl-CoA dehydrogenase [EC:1.3.3.17]
D      ToN1_18690 Isoquinoline 1-oxidoreductase, alpha subunit	K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D      ToN1_18700 Isoquinoline 1-oxidoreductase, beta subunit	K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D      ToN1_40910 Putative NADP oxidoreductase, coenzyme F420-dependent	K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D      ToN1_04720 Electron transfer flavoprotein-ubiquinone oxidoreductase	K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D      ToN1_46450 Putative electron transfer flavoprotein-ubiquinone oxidoreductase	K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D      ToN1_03820 adh1; Alcohol dehydrogenase, Zn-containing	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      ToN1_05260 Putative NADPH quinone oxidoreductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      ToN1_10430 qor; Quinone oxidoreductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      ToN1_04870 NADH:quinone oxidoreductase	K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      ToN1_05670 Putative nitronate monooxygenase	K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      ToN1_19020 azoR; FMN-dependent NADH-azoreductase	K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D      ToN1_09020 ahpF; Alkyl hydroperoxide reductase, subunit F	K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D      ToN1_17780 Cytochrome c family protein	K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D      ToN1_16460 msrA; Peptide methionine sulfoxide reductase	K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D      ToN1_46240 msrB; Peptide methionine sulfoxide reductase	K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D      ToN1_42790 Glutathione transferase family protein	K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D      ToN1_35520 mrsP; Protein-methionine-sulfoxide reductase, catalytic subunit	K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D      ToN1_23120 Alpha/beta hydrolase fold-1 domain-containing protein	K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D      ToN1_00620 Putative peroxiredoxin, alkyl hydroperoxide reductase subunit C domain-containing protein	K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D      ToN1_38940 putative peroxiredoxin	K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D      ToN1_24670 tpx; Thiol peroxidase	K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D      ToN1_48840 Peroxidase	K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D      ToN1_09010 ahpC1; Alkyl hydroperoxide reductase, subunit C	K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D      ToN1_47020 Putative iron-dependent peroxidase	K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D      ToN1_38240 Nickel-dependent hydrogenase	K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2]
D      ToN1_38210 putative NADH-ubiquinone oxidoreductase, large subunit	K18005 hoxF; [NiFe] hydrogenase diaphorase moiety large subunit [EC:1.12.1.2]
D      ToN1_38220 Putative NADH-ubiquinone oxidoreductase, subunit G	K18006 hoxU; [NiFe] hydrogenase diaphorase moiety small subunit [EC:1.12.1.2]
D      ToN1_38230 putative NADH-ubiquinone oxidoreductase, small subunit	K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2]
D      ToN1_02730 putative pirin	K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D      ToN1_19010 Pirin family protein	K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D      ToN1_41430 hmp; Flavohemprotein	K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D      ToN1_08520 hpnE; Hydroxysqualene dehydroxylase	K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D      ToN1_08380 fpr1; Ferredoxin--NADP reductase	K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D      ToN1_29410 fpr2; Ferredoxin--NADP+ reductase	K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D      ToN1_42070 Ferredoxin--NADP reductase	K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D      ToN1_25250 arsC1; Arsenate reductase	K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D      ToN1_42180 arsC2; Arsenate reductase	K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D      ToN1_43630 pqqE; PqqA peptide cyclase	K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D      ToN1_01370 bssD; Benzylsuccinate synthase activating enzyme	K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D      ToN1_45570 AmmeMemoRadiSam system radical SAM enzyme	K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D      ToN1_13330 hyfB; Hydrogenase-4 component, subunit B	K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D      ToN1_13310 hyfE; Hydrogenase-4 component, subunit E	K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D      ToN1_13300 hyfF; Hydrogenase-4 component, subunit F	K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D      ToN1_14990 pcm; Protein-L-isoaspartate O-methyltransferase	K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D      ToN1_17590 Protein-L-isoaspartate o-methyltransferase	K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D      ToN1_16260 Putative cyclopropane-fatty-acyl-phospholipid synthase	K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D      ToN1_33510 cfa; Cyclopropane-fatty-acyl-phospholipid synthase	K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D      ToN1_30740 Carbamoyltransferase	K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D      ToN1_25490 fabD2; Malonyl-CoA-acyl carrier protein transacylase	K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39]
D      ToN1_32580 lnt; Apolipoprotein N-acyltransferase	K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D      ToN1_12990 GCN5-related N-acetyltransferase	K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D      ToN1_47440 aat; Leucyl/phenylalanyl-tRNA-protein transferase	K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D      ToN1_14950 Transglutaminase domain-containing protein, DUF3488 and DUF4129	K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D      ToN1_47430 bpt; Aspartate/glutamate leucyltransferase	K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D      ToN1_25560 mdcB; putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase	K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D      ToN1_18470 lgt; Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase	K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D      ToN1_23460 FAD:protein FMN transferase	K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D      ToN1_46260 Putative phosphoenolpyruvate synthase regulatory protein	K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D      ToN1_35120 pap; Polyphosphate:AMP phosphotransferase	K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D      ToN1_35710 glnE; Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme	K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D      ToN1_25500 mdcG; Phosphoribosyl-dephospho-CoA transferase	K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D      ToN1_47810 putative protein UPF0061	K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D      ToN1_28730 putative phosphoglycerol transferase	K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D      ToN1_07290 Putative phosphoenolpyruvate synthase	K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D      ToN1_23230 Putative phosphate dikinase	K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D      ToN1_11100 aceK; Isocitrate dehydrogenase kinase/phosphatase	K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D      ToN1_22380 hprK; HPr kinase/phosphorylase	K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D      ToN1_49720 CoA-transferase family III protein	K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D      ToN1_50440 CoA-transferase family III protein	K25761 iaaL; phenylsuccinyl-CoA transferase [EC:2.8.3.28]
D      ToN1_29030 Macro domain-containing protein	K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D      ToN1_39630 Thioesterase superfamily protein	K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D      ToN1_22090 ybgC; Tol-Pal system-associated acyl-CoA thioesterase	K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D      ToN1_10970 Putative thioesterase	K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D      ToN1_46460 Uncharacterized protein	K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D      ToN1_05780 Tyrosine/serine-protein phosphatase	K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D      ToN1_06740 Tyrosine/serine-protein phosphatase	K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D      ToN1_08310 Putative phosphatase	K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D      ToN1_35690 Histidine phosphatase superfamily protein	K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D      ToN1_24070 Two component system response regulator	K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D      ToN1_33830 Putative two component system response regulator	K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D      ToN1_23410 Putative phosphodiesterase	K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D      ToN1_39740 putative hydrolase, TatD-type	K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D      ToN1_45780 Putative deoxyribonuclease, TatD-related	K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D      ToN1_24850 def1; Peptide deformylase	K01462 PDF; peptide deformylase [EC:3.5.1.88]
D      ToN1_39140 def2; Peptide deformylase	K01462 PDF; peptide deformylase [EC:3.5.1.88]
D      ToN1_35730 Carbon-nitrogen hydrolase domain-containing protein	K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D      ToN1_32140 RutC-like superfamily protein	K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D      ToN1_50150 RutC family protein	K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D      ToN1_10080 Maf-like protein	K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D      ToN1_14930 AAA family ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      ToN1_28440 Putative ATPase, AAA-type	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      ToN1_43030 AAA family ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      ToN1_03860 Putative hydrolase RBBP9/YdeN domain-containing protein	K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D      ToN1_36480 Putative hydrolase	K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D      ToN1_25540 mdcD; Biotin-independent malonate decarboxylase, beta subunit	K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D      ToN1_25530 mdcE; Biotin-independent malonate decarboxylase, gamma subunit	K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D      ToN1_39020 Multifunctional fusion protein	K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D      ToN1_32120 Hydroxypyruvate isomerase	K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D      ToN1_20110 icmF; Fused isobutyryl-CoA mutase	K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D      ToN1_03310 Putative CoA-substrate-specific enzyme activase	K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D      ToN1_09330 Long-chain-fatty-acid-CoA ligase	K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D      ToN1_06620 Putative AMP-dependent synthetase/ligase	K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D      ToN1_50350 Putative long-chain-fatty-acid--CoA ligase	K25760 iaaB; indoleacetate---CoA ligase [EC:6.2.1.75]
D      ToN1_17230 mpl; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase	K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D      ToN1_19240 acxB; Acetone carboxylase, alpha subunit	K10854 acxB; acetone carboxylase, alpha subunit [EC:6.4.1.6]
D      ToN1_19250 acxA; Acetone carboxylase, beta subunit	K10855 acxA; acetone carboxylase, beta subunit [EC:6.4.1.6]
D      ToN1_19230 acxC; Acetone carboxylase, gamma subunit	K10856 acxC; acetone carboxylase, gamma subunit [EC:6.4.1.6]
D      ToN1_42680 rnfD1; Ion-translocating oxidoreductase complex, subunit D	K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D      ToN1_47380 rnfD2; Ion-translocating oxidoreductase complex, subunit D	K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D      ToN1_42670 rnfC1; Ion-translocating oxidoreductase complex, subunit C	K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D      ToN1_47390 rnfC2; Ion-translocating oxidoreductase complex, subunit C	K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D      ToN1_42660 rnfB1; Ion-translocating oxidoreductase complex, subunit B	K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D      ToN1_47400 rnfB2; Ion-translocating oxidoreductase complex, subunit B	K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D      ToN1_36830 ccoI; Cbb3-type cytochrome oxidase associated transport ATPase	K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D      ToN1_16820 Cation transport ATPase	K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D      ToN1_43820 mgtA; Magnesium-translocating P-type ATPase	K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C    99981 Carbohydrate metabolism
D      ToN1_31100 lutA; Lactate utilization protein A	K18928 lldE; L-lactate dehydrogenase complex protein LldE
D      ToN1_31090 lutB; Lactate utilization protein B	K18929 lldF; L-lactate dehydrogenase complex protein LldF
D      ToN1_31080 lutC; Lactate utilization protein C	K00782 lldG; L-lactate dehydrogenase complex protein LldG
C    99982 Energy metabolism
D      ToN1_00350 Sulfur carrier protein domain-containing protein, FdhD-like	K02379 fdhD; FdhD protein
D      ToN1_24770 fdhD1; Sulfur carrier protein	K02379 fdhD; FdhD protein
D      ToN1_44780 fdhD3; Sulfur carrier protein	K02379 fdhD; FdhD protein
D      ToN1_06270 putative ferredoxin, 4Fe-4S	K05337 fer; ferredoxin
D      ToN1_37440 fdxA; Ferredoxin	K05524 fdxA; ferredoxin
D      ToN1_45280 Ferredoxin	K05524 fdxA; ferredoxin
D      ToN1_42690 rnfG1; Ion-translocating oxidoreductase complex, subunit G	K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D      ToN1_47370 rnfG2; Ion-translocating oxidoreductase complex, subunit G	K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D      ToN1_42700 rnfE1; Ion-translocating oxidoreductase complex, subunit E	K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D      ToN1_47360 rnfE2; Ion-translocating oxidoreductase complex, subunit E	K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D      ToN1_42650 rnfA1; Ion-translocating oxidoreductase complex, subunit A	K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D      ToN1_47410 rnfA2; Ion-translocating oxidoreductase complex, subunit A	K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D      ToN1_09440 Iron-sulfur cluster assembly scaffold protein	K04488 iscU; nitrogen fixation protein NifU and related proteins
D      ToN1_09710 iscU; Iron-sulfur cluster assembly scaffold protein	K04488 iscU; nitrogen fixation protein NifU and related proteins
D      ToN1_04190 citB; Citrate utilization protein B	K13795 citB; citrate/tricarballylate utilization protein
D      ToN1_04180 Putative tricarballylate dehydrogenase	K13796 cobZ; tricarballylate dehydrogenase
D      ToN1_07020 Von Willebrand factor domain-containing protein	K02448 norD; nitric oxide reductase NorD protein
D      ToN1_44180 Von Willebrand factor domain-containing protein	K02448 norD; nitric oxide reductase NorD protein
D      ToN1_03360 Cytochrome c oxidase, subunit III	K02164 norE; nitric oxide reductase NorE protein
D      ToN1_07160 Cytochrome c oxidase, subunit III	K02164 norE; nitric oxide reductase NorE protein
D      ToN1_07200 Cytochrome c oxidase, subunit III	K02164 norE; nitric oxide reductase NorE protein
D      ToN1_44230 norE; Nitric oxide reductase, accessory protein	K02164 norE; nitric oxide reductase NorE protein
D      ToN1_01410 bssE; Chaperone benzylsuccinate synthase-associated	K04748 norQ; nitric oxide reductase NorQ protein
D      ToN1_07030 CbbQ/NirQ/NorQ C-terminal domain-containing protein	K04748 norQ; nitric oxide reductase NorQ protein
D      ToN1_44210 norQ; Denitrification regulatory protein	K04748 norQ; nitric oxide reductase NorQ protein
D      ToN1_17700 norVW; Fusion protein of nitric oxide reductase (Flavorubredoxin NorV) with its associated reductase (NorW)	K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D      ToN1_27780 napD; Chaperone NapD	K02570 napD; periplasmic nitrate reductase NapD
D      ToN1_27770 napF; Ferredoxin-type protein NapF	K02572 napF; ferredoxin-type protein NapF
D      ToN1_41660 Rieske [2FE-2S] iron-sulfur domain-containing protein	K15878 K15878; rieske iron-sulfur protein
D      ToN1_27830 napC; Cytochrome c-type protein	K02569 napC; cytochrome c-type protein NapC
D      ToN1_27800 napG; Ferredoxin-type protein NapG	K02573 napG; ferredoxin-type protein NapG
D      ToN1_27810 napH; Ferredoxin-type protein NapH	K02574 napH; ferredoxin-type protein NapH
D      ToN1_05550 etfb1; Electron transfer flavoprotein, beta subunit	K03521 fixA; electron transfer flavoprotein beta subunit
D      ToN1_06350 etfb2; Electron transfer flavoprotein, beta subunit	K03521 fixA; electron transfer flavoprotein beta subunit
D      ToN1_06760 etfB3; Electron transfer flavoprotein, beta subunit	K03521 fixA; electron transfer flavoprotein beta subunit
D      ToN1_45800 etfB4; Electron transfer flavoprotein, beta subunit	K03521 fixA; electron transfer flavoprotein beta subunit
D      ToN1_15150 nirC; Nitrite reductase like c-type cytochrome	K19344 nirC; cytochrome c55X
D      ToN1_15140 nirF; Heme d1 biosynthesis protein	K19345 nirF; protein NirF
D      ToN1_49430 Dodecin domain-containing protein	K09165 K09165; dodecin
C    99983 Lipid metabolism
C    99984 Nucleotide metabolism
C    99985 Amino acid metabolism
D      ToN1_15450 Uncharacterized protein	K06203 cysZ; CysZ protein
D      ToN1_12880 Putative glyoxalase	K08234 yaeR; glyoxylase I family protein
D      ToN1_43390 Glyoxylase I family protein	K08234 yaeR; glyoxylase I family protein
D      ToN1_18090 Pyridoxal phosphate homeostasis protein, YggS family	K06997 yggS; PLP dependent protein
C    99986 Glycan metabolism
D      ToN1_15230 Lipopolysaccharide assembly protein A domain-containing protein	K08992 lapA; lipopolysaccharide assembly protein A
D      ToN1_15220 lapB; Lipopolysaccharide assembly protein B	K19804 lapB; lipopolysaccharide assembly protein B
C    99987 Cofactor metabolism
D      ToN1_34470 hemY; Protoporphyrinogen oxidase	K02498 hemY; HemY protein
D      ToN1_15100 nirJ; Heme d1 biosynthesis protein	K24868 nirJ; heme d1 biosynthesis protein
D      ToN1_29730 ubiB; putative protein kinase	K03688 ubiB; ubiquinone biosynthesis protein
D      ToN1_46010 UbiB domain-containing protein	K03688 ubiB; ubiquinone biosynthesis protein
D      ToN1_24420 SCP2 sterol-binding domain containing protein	K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D      ToN1_23320 Membrane fusogenic activity family protein	K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D      ToN1_29560 Sterol-binding domain-containing protein	K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D      ToN1_24800 mobB1; Molybdopterin-guanine dinucleotide biosynthesis adapter protein	K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D      ToN1_47700 mobB2; Molybdopterin-guanine dinucleotide biosynthesis adapter protein	K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C    99988 Secondary metabolism
D      ToN1_20870 Putative NADPH-dependent FMN reductase	K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D      ToN1_13270 Putative NAD(P)H-dependent FMN reductase	K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C    99999 Others
D      ToN1_13260 DoxX family protein	K15977 K15977; putative oxidoreductase
D      ToN1_33720 DoxX family protein	K15977 K15977; putative oxidoreductase
D      ToN1_43650 DoxX family protein	K15977 K15977; putative oxidoreductase
D      ToN1_08670 Acyl-CoA synthetase	K09181 yfiQ; acetyltransferase
D      ToN1_47050 Acetyltransferase, (GNAT) family	K09181 yfiQ; acetyltransferase
B
B  09192 Unclassified: genetic information processing
C    99973 Transcription
D      ToN1_11210 cspA1; Cold shock-like protein	K03704 cspA; cold shock protein
D      ToN1_27450 cspA2; Cold shock-like protein	K03704 cspA; cold shock protein
D      ToN1_30380 cspA3; Cold shock-like protein	K03704 cspA; cold shock protein
D      ToN1_23340 glnB1; Nitrogen regulatory protein P-II	K04752 glnK; nitrogen regulatory protein P-II 2
D      ToN1_08690 Transcription accessory protein	K06959 tex; protein Tex
C    99974 Translation
D      ToN1_46930 Putative ABC transporter, ATP-binding protein	K13926 rbbA; ribosome-dependent ATPase
D      ToN1_36940 Metallo-beta-lactamase family protein	K07576 K07576; metallo-beta-lactamase family protein
C    99975 Protein processing
D      ToN1_11220 clpS; ATP-dependent Clp protease adapter protein ClpS	K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D      ToN1_39070 tig; Trigger factor	K03545 tig; trigger factor
D      ToN1_35510 mrsQ; Protein-methionine-sulfoxide reductase, heme-binding subunit	K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D      ToN1_47820 smpB; SsrA-binding protein	K03664 smpB; SsrA-binding protein
D      ToN1_25750 hupF; Hydrogenase expression/formation protein	K04653 hypC; hydrogenase expression/formation protein HypC
D      ToN1_25820 hypC; Hydrogenase maturation factor	K04653 hypC; hydrogenase expression/formation protein HypC
D      ToN1_25830 hypD; Hydrogenase maturation factor	K04654 hypD; hydrogenase expression/formation protein HypD
D      ToN1_25840 hypE; Hydrogenase expression/formation protein	K04655 hypE; hydrogenase expression/formation protein HypE
D      ToN1_25810 hypF; Hydrogenase maturation factor	K04656 hypF; hydrogenase maturation protein HypF
D      ToN1_23310 Mg(2+) chelatase family related protein	K07391 comM; magnesium chelatase family protein
D      ToN1_10860 Putative proteasome	K07395 K07395; putative proteasome-type protease
D      ToN1_35910 OsmC/Ohr superfamily protein	K07397 yhfA; putative redox protein
D      ToN1_12630 xdhC; Xanthine dehydrogenase accessory protein	K07402 xdhC; xanthine dehydrogenase accessory factor
D      ToN1_29620 Putative xanthine dehydrogenase accessory protein	K07402 xdhC; xanthine dehydrogenase accessory factor
D      ToN1_22020 ClpP/crotonase-like domain superfamily protein	K07403 nfeD; membrane-bound serine protease (ClpP class)
C    99976 Replication and repair
D      ToN1_07870 RadC-like JAB domain-dontaining protein	K03630 radC; DNA repair protein RadC
D      ToN1_11180 Putative DNA replication and repair protein	K03630 radC; DNA repair protein RadC
D      ToN1_21880 putative DNA recombination protein	K09760 rmuC; DNA recombination protein RmuC
D      ToN1_17200 putative protein UPF0102	K07460 yraN; putative endonuclease
D      ToN1_24870 putative DNA-processing protein	K04096 smf; DNA processing protein
D      ToN1_37170 rarA; Recombination factor protein	K07478 ycaJ; putative ATPase
D      ToN1_15190 Ribonuclease H superfamily protein	K07501 K07501; 3'-5' exonuclease
D      ToN1_03490 Putative transposase, IS3/IS911 family	K07483 K07483; transposase
D      ToN1_05110 Putative transposase, IS3/IS911 family	K07483 K07483; transposase
D      ToN1_05740 Putative transposase, IS3/IS911 family	K07483 K07483; transposase
D      ToN1_12140 Transposase, IS3/IS911 family	K07483 K07483; transposase
D      ToN1_40390 Uncharacterized protein	K07483 K07483; transposase
D      ToN1_48590 Transposase IS3/IS911 family protein	K07483 K07483; transposase
D      ToN1_48570 putative transposase, IS66 family	K07484 K07484; transposase
D      ToN1_48580 Putative transposase, IS66 family	K07484 K07484; transposase
D      ToN1_04330 Putative transposase, IS116/IS110/IS902 family	K07486 K07486; transposase
D      ToN1_03480 Transposase	K07497 K07497; putative transposase
D      ToN1_05720 Putative transposase InsF-like	K07497 K07497; putative transposase
D      ToN1_05730 Putative transposase InsF-like	K07497 K07497; putative transposase
D      ToN1_12130 Transposase InsF-like	K07497 K07497; putative transposase
D      ToN1_40400 Transposase	K07497 K07497; putative transposase
C    99979 Viral proteins
C    99998 Others
D      ToN1_33540 Nucleoid-associated protein	K09747 ebfC; nucleoid-associated protein EbfC
B
B  09193 Unclassified: signaling and cellular processes
C    99977 Transport
D      ToN1_16240 Major facilitator superfamily (MFS) protein	K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D      ToN1_42510 Amino acid permease	K03293 TC.AAT; amino acid transporter, AAT family
D      ToN1_40920 Putative ATP:ADP antiporter, AAA family	K03301 TC.AAA; ATP:ADP antiporter, AAA family
D      ToN1_44390 BCCT family transporter	K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D      ToN1_33100 Phosphate transporter family protein	K03306 TC.PIT; inorganic phosphate transporter, PiT family
D      ToN1_49600 Putative phosphate permease	K03306 TC.PIT; inorganic phosphate transporter, PiT family
D      ToN1_29710 Na+/solute symporter	K03307 TC.SSS; solute:Na+ symporter, SSS family
D      ToN1_16430 Transporter	K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D      ToN1_49710 Putative sodium:alanine symporter	K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D      ToN1_03900 Cytosine permease family protein	K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D      ToN1_12520 Putative purine-cytosine permease	K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D      ToN1_12570 pucI; Purine-cytosine permease	K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D      ToN1_50060 Putative purine-cytosine permease	K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D      ToN1_34830 Putative polysaccharide biosynthesis protein	K03328 TC.PST; polysaccharide transporter, PST family
C    99978 Cell growth
D      ToN1_45860 Intracellular septation protein A	K06190 ispZ; intracellular septation protein
D      ToN1_42980 DNA-binding recombinase domain-containing protein	K06400 spoIVCA; site-specific DNA recombinase
D      ToN1_39040 SpoVR family protein	K06415 spoVR; stage V sporulation protein R
D      ToN1_35360 Peptidase, M23 family	K22719 envC; murein hydrolase activator
C    99993 Cell motility
D      ToN1_33990 Putative two component system response regulator	K24105 mglA; mutual gliding-motility protein MglA
D      ToN1_48350 Small GTPase superfamily protein	K24105 mglA; mutual gliding-motility protein MglA
C    99995 Signaling proteins
D      ToN1_23920 Putative RNA chaperone PorQ	K03607 proQ; ProP effector
D      ToN1_49340 cstA; Peptide transporter	K06200 cstA; carbon starvation protein
D      ToN1_09550 typA; GTP-binding protein	K06207 typA; GTP-binding protein
D      ToN1_42100 CBS domain-containing protein	K07168 K07168; CBS domain-containing membrane protein
D      ToN1_32550 ybeZ; PhoH-like protein	K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D      ToN1_38930 Putative PhoH-like ATPase	K07175 phoH2; PhoH-like ATPase
D      ToN1_39060 Putative serine protein kinase, PrkA-like	K07180 prkA; serine protein kinase
D      ToN1_38920 CBS domain-containing protein	K07182 K07182; CBS domain-containing protein
D      ToN1_36700 putative protein DUF520	K09767 yajQ; cyclic-di-GMP-binding protein
C    99992 Structural proteins
D      ToN1_37160 lolA; Outer-membrane lipoprotein carrier protein	K03634 lolA; outer membrane lipoprotein carrier protein
D      ToN1_31840 lolB; Outer-membrane lipoprotein	K02494 lolB; outer membrane lipoprotein LolB
D      ToN1_32760 mlaA; Phospholipid-binding lipoprotein	K04754 mlaA; phospholipid-binding lipoprotein MlaA
D      ToN1_17320 glycine zipper 2TM domain-containing protein	K06077 slyB; outer membrane lipoprotein SlyB
D      ToN1_01200 Putative chaperon	K06142 hlpA; outer membrane protein
D      ToN1_14980 Putative peptidase	K06194 nlpD; lipoprotein NlpD
D      ToN1_47930 ompW; Outer membrane protein	K07275 ompW; outer membrane protein
D      ToN1_26560 AsmA family protein	K07290 yhjG; AsmA family protein
D      ToN1_27460 NfeD-like domain-containing protein	K07340 ybbJ; inner membrane protein
D      ToN1_46920 Biotin-lipoyl like protein domain-containing protein	K01993 ABC-2.TX; HlyD family secretion protein
D      ToN1_24050 RND efflux system, membrane fusion protein	K02005 ABC.CD.TX; HlyD family secretion protein
D      ToN1_31290 Efflux transporter, RND family	K02005 ABC.CD.TX; HlyD family secretion protein
D      ToN1_45980 RND efflux system, membrane fusion protein	K02005 ABC.CD.TX; HlyD family secretion protein
D      ToN1_22940 Glycine zipper 2TM domain-containing protein	K04062 osmB; osmotically inducible lipoprotein OsmB
D      ToN1_13180 Uncharacterized protein	K04062 osmB; osmotically inducible lipoprotein OsmB
D      ToN1_27880 ccmE; Cytochrome c-type biogenesis protein	K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D      ToN1_27910 ccmH; Cytochrome c-type biogenesis protein	K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D      ToN1_27920 cycH; Cytochrome c-type biogenesis protein	K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D      ToN1_33170 putative protein DUF4115	K15539 rodZ; cytoskeleton protein RodZ
C    99994 Others
D      ToN1_35170 phoU; Phosphate-specific transport system accessory protein	K02039 phoU; phosphate transport system protein
D      ToN1_18540 bfd; Bacterioferritin-associated ferredoxin	K02192 bfd; bacterioferritin-associated ferredoxin
D      ToN1_29230 cutA; Divalent-cation tolerance protein	K03926 cutA; periplasmic divalent cation tolerance protein
D      ToN1_16930 apaG; Protein ApaG	K06195 apaG; ApaG protein
D      ToN1_21420 cyaY; Iron-sulfur cluster assembly protein	K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D      ToN1_10920 Methyl-accepting chemotaxis protein	K07216 hr; hemerythrin
D      ToN1_25150 Putative hemerythrin-like protein	K07216 hr; hemerythrin
D      ToN1_26980 Hemerythrin-like metal-binding protein	K07216 hr; hemerythrin
D      ToN1_32110 hemerythrin-like domain-containing protein	K07216 hr; hemerythrin
D      ToN1_00950 nosD; Nitrous oxide reductase, maturation protein (periplasmic binding protein)	K07218 nosD; nitrous oxidase accessory protein
D      ToN1_29600 Putative molybdate-binding protein	K07219 K07219; putative molybdopterin biosynthesis protein
D      ToN1_42785 Uncharacterized protein	K07222 K07222; putative flavoprotein involved in K+ transport
D      ToN1_00130 Nnrs family protein	K07234 K07234; uncharacterized protein involved in response to NO
D      ToN1_14030 NnrS-like protein	K07234 K07234; uncharacterized protein involved in response to NO
D      ToN1_36970 NnrS family protein	K07234 K07234; uncharacterized protein involved in response to NO
D      ToN1_00980 nosL; Nitrous oxide reductase, accessory protein	K19342 nosL; copper chaperone NosL
B
B  09194 Poorly characterized
C    99996 General function prediction only
D      ToN1_37690 cvpA; Colicin V production protein	K03558 cvpA; membrane protein required for colicin V production
D      ToN1_28790 paaY1; Phenylacetic acid degradation protein	K02617 paaY; phenylacetic acid degradation protein
D      ToN1_46800 paaY2; Phenylacetic acid degradation protein	K02617 paaY; phenylacetic acid degradation protein
D      ToN1_43590 pqqA; Coenzyme PQQ biosynthesis protein	K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A
D      ToN1_43600 pqqB; Coenzyme PQQ biosynthesis protein	K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D      ToN1_43620 pqqD; PqqA binding protein	K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D      ToN1_34150 DEAD/DEAH box helicase	K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D      ToN1_20220 Oxygen-binding protein	K06886 glbN; hemoglobin
D      ToN1_31210 Putative patatin	K07001 K07001; NTE family protein
D      ToN1_33500 Putative patatin-like phospholipase	K07001 K07001; NTE family protein
D      ToN1_37390 Putative patatin-like phospholipase	K07001 K07001; NTE family protein
D      ToN1_42410 Patatin-like phospholipase domain-containing protein	K07001 K07001; NTE family protein
D      ToN1_35240 Pyrimidine 5-nucleotidase family protein	K07025 K07025; putative hydrolase of the HAD superfamily
D      ToN1_35970 erpA; Putative iron-sulfur cluster insertion protein	K15724 erpA; iron-sulfur cluster insertion protein
D      ToN1_09480 sufB; Iron-regulated ABC transporter, membrane component	K09014 sufB; Fe-S cluster assembly protein SufB
D      ToN1_09460 sufd; Iron-regulated ABC transporter, permease protein	K09015 sufD; Fe-S cluster assembly protein SufD
D      ToN1_27230 Putative LexA-binding hydrolase	K07038 K07038; inner membrane protein
D      ToN1_14450 putative protein UPF0761	K07058 K07058; membrane protein
D      ToN1_43020 Virulence factor family protein, BrkB	K07058 K07058; membrane protein
D      ToN1_09370 Phosphoribosyltransferase	K07100 K07100; putative phosphoribosyl transferase
D      ToN1_45560 Uncharacterized protein	K07100 K07100; putative phosphoribosyl transferase
D      ToN1_36020 PhnB-like protein	K04750 phnB; PhnB protein
D      ToN1_13240 heme-degrading domain-containing protein	K11477 glcG; glc operon protein GlcG
D      ToN1_38330 heme-degrading domain-containing protein	K11477 glcG; glc operon protein GlcG
D      ToN1_12020 LemA protein	K03744 lemA; LemA protein
D      ToN1_48860 LemA family protein	K03744 lemA; LemA protein
D      ToN1_49400 SlyX domain-containing protein	K03745 slyX; SlyX protein
D      ToN1_24880 smg; Protein Smg-like	K03747 smg; Smg protein
D      ToN1_27580 creA; CreA family protein	K05805 creA; CreA protein
D      ToN1_21600 Sporulation related domain-containing protein	K03749 dedD; DedD protein
D      ToN1_37680 Sporulation related domain-containing protein	K03749 dedD; DedD protein
D      ToN1_20080 Membrane assiciated protein, DedA family	K03975 dedA; membrane-associated protein
D      ToN1_38820 putative protein UPF0225	K09858 K09858; SEC-C motif domain protein
D      ToN1_28750 Cupin domain-containing protein	K11312 K11312; cupin 2 domain-containing protein
D      ToN1_24570 Protein PhnA	K06193 phnA; protein PhnA
C    99997 Function unknown
D      ToN1_12950 Uncharacterized protein	K06867 K06867; uncharacterized protein
D      ToN1_29370 Ankyrin repeat domain-containing protein	K06867 K06867; uncharacterized protein
D      ToN1_39750 ankyrin repeat-containing protein	K06867 K06867; uncharacterized protein
D      ToN1_45530 Ankyrin repeat domain-containing protein	K06867 K06867; uncharacterized protein
D      ToN1_01770 qhpX1; Quinohemoprotein amine dehydrogenase maturation protein	K06871 K06871; uncharacterized protein
D      ToN1_31960 Radical SAM family protein	K06871 K06871; uncharacterized protein
D      ToN1_38430 qhpX2; Quinohemoprotein amine dehydrogenase SAM-dependent activating subunit	K06871 K06871; uncharacterized protein
D      ToN1_49680 Peptide-modifying radical SAM enzym	K06871 K06871; uncharacterized protein
D      ToN1_48870 TPM domain-containing protein	K06872 K06872; uncharacterized protein
D      ToN1_12500 Alpha/beta hydrolase family-protein	K06889 K06889; uncharacterized protein
D      ToN1_26300 GPW/gp25 family protein	K06903 W; Bacteriophage baseplate protein W
D      ToN1_26390 Putative tail sheath protein	K06907 FI; Bacteriophage tail sheath protein
D      ToN1_31490 Putative ATPase, AAA-type	K06923 K06923; uncharacterized protein
D      ToN1_29930 putative protein DUF1289	K06938 K06938; uncharacterized protein
D      ToN1_29940 putative protein DUF1289	K06938 K06938; uncharacterized protein
D      ToN1_17800 zinc-or iron-chelating domain-containing protein	K06940 K06940; uncharacterized protein
D      ToN1_38760 putative zinc-or iron-chelating domain-containing protein	K06940 K06940; uncharacterized protein
D      ToN1_38770 Uncharacterized protein	K06940 K06940; uncharacterized protein
D      ToN1_18940 Uncharacterized protein	K06950 K06950; uncharacterized protein
D      ToN1_16280 FAD dependent oxidoreductase	K06954 K06954; uncharacterized protein
D      ToN1_17820 Putative esterase	K07000 K07000; uncharacterized protein
D      ToN1_00410 Putative transport protein	K07003 K07003; uncharacterized protein
D      ToN1_01640 Membrane transport protein MMPL domain-containing protein	K07003 K07003; uncharacterized protein
D      ToN1_03210 MMPL membrane transport protein domain-containing protein	K07003 K07003; uncharacterized protein
D      ToN1_03730 MMPL membrane transport protein	K07003 K07003; uncharacterized protein
D      ToN1_03990 MMPL family membrane transport protein	K07003 K07003; uncharacterized protein
D      ToN1_05700 MMPL membrane transport protein domain-containing protein	K07003 K07003; uncharacterized protein
D      ToN1_06040 MMPL membrane transport protein domain-containing protein	K07003 K07003; uncharacterized protein
D      ToN1_07250 Putative transporter, sterol-sensing domain containing	K07003 K07003; uncharacterized protein
D      ToN1_07360 Putative membrane transport protein, MMPL domain-containing	K07003 K07003; uncharacterized protein
D      ToN1_19210 MMPL family protein	K07003 K07003; uncharacterized protein
D      ToN1_32350 Membrane transport protein MMPL domain-containing protein	K07003 K07003; uncharacterized protein
D      ToN1_38380 MMPL family membrane transport protein	K07003 K07003; uncharacterized protein
D      ToN1_13420 Putative pyridoxamine 5'-phosphate oxidase	K07005 K07005; uncharacterized protein
D      ToN1_04430 Ferredoxin-NADH oxidoreductase	K07006 K07006; uncharacterized protein
D      ToN1_13820 Putative sulfatase, DUF3413	K07014 K07014; uncharacterized protein
D      ToN1_14310 Putative sulfatase	K07014 K07014; uncharacterized protein
D      ToN1_29530 Xaa-Pro dipeptidyl-peptidase-like domain-containing protein	K07018 K07018; uncharacterized protein
D      ToN1_45520 putative glyoxalase	K07032 K07032; uncharacterized protein
D      ToN1_38750 Uncharacterized protein	K07039 K07039; uncharacterized protein
D      ToN1_20200 zinc binding domain-containing protein	K07054 K07054; uncharacterized protein
D      ToN1_02940 putative permease, DUF318 domain-containing	K07089 K07089; uncharacterized protein
D      ToN1_42340 putative permease domain-containing protein, DUF318	K07089 K07089; uncharacterized protein
D      ToN1_13770 Transmembrane protein, TauE-like	K07090 K07090; uncharacterized protein
D      ToN1_03640 Transmembrane family protein, TauE-like	K07090 K07090; uncharacterized protein
D      ToN1_04550 Putative transmembrane protein, TauE-like	K07090 K07090; uncharacterized protein
D      ToN1_18410 Transmembrane family protein, TauE-like	K07090 K07090; uncharacterized protein
D      ToN1_21930 Putative membrane transporter protein, TauE-like	K07090 K07090; uncharacterized protein
D      ToN1_10950 Transmembrane protein TauE-like family protein	K07090 K07090; uncharacterized protein
D      ToN1_25380 Putative membrane transporter protein	K07090 K07090; uncharacterized protein
D      ToN1_45380 putative protein DUF839	K07093 K07093; uncharacterized protein
D      ToN1_46610 DHH phosphoesterase superfamily protein	K07097 K07097; uncharacterized protein
D      ToN1_29360 NAD(P)-binding domain-containing protein	K07118 K07118; uncharacterized protein
D      ToN1_19110 TPR repeat-containing protein	K07126 K07126; uncharacterized protein
D      ToN1_13000 putative protein DUF1508	K07126 K07126; uncharacterized protein
D      ToN1_27960 Uncharacterized protein	K07126 K07126; uncharacterized protein
D      ToN1_28000 Sel1-like repeat domain-containing protein	K07126 K07126; uncharacterized protein
D      ToN1_49410 FAD/NAD(P)-binding superfamily protein	K07137 K07137; uncharacterized protein
D      ToN1_20590 Putative Fe-S oxidoreductase	K07139 K07139; uncharacterized protein
D      ToN1_23730 ATP-dependent serine peptidase	K07157 K07157; uncharacterized protein
D      ToN1_25350 Putative membrane protein insertion efficiency factor	K08998 K08998; uncharacterized protein
D      ToN1_14850 Uncharacterized protein	K09005 K09005; uncharacterized protein
D      ToN1_10640 YqeY-like protein	K09117 K09117; uncharacterized protein
D      ToN1_29250 Mut7-C RNAse domain-containing protein	K09122 K09122; uncharacterized protein
D      ToN1_44140 Putative adenosine specific kinase	K09129 K09129; uncharacterized protein
D      ToN1_18060 putative protein DUF167/CHP00251	K09131 K09131; uncharacterized protein
D      ToN1_43050 putative protein DUF4213	K09138 K09138; uncharacterized protein
D      ToN1_45580 AmmeMemoRadiSam system protein A	K09141 K09141; uncharacterized protein
D      ToN1_24220 putative protein UPF0250	K09158 K09158; uncharacterized protein
D      ToN1_16270 putative protein DUF1365	K09701 K09701; uncharacterized protein
D      ToN1_22280 Flagellar asseembly family protein A	K09749 K09749; uncharacterized protein
D      ToN1_42590 putative protein UPF0178	K09768 K09768; uncharacterized protein
D      ToN1_45850 YCII-like protein	K09780 K09780; uncharacterized protein
D      ToN1_39050 putative protein UPF0229	K09786 K09786; uncharacterized protein
D      ToN1_36560 putative protein UPF0434	K09791 K09791; uncharacterized protein
D      ToN1_37020 Urease accessory domain-containing protein, UreH-like	K09792 K09792; uncharacterized protein
D      ToN1_42710 rnfH; Protein RnfH	K09801 K09801; uncharacterized protein
D      ToN1_47840 RnfH family protein	K09801 K09801; uncharacterized protein
D      ToN1_01070 Putative peroxide stress protein	K09861 K09861; uncharacterized protein
D      ToN1_31510 yacG; DNA gyrase inhibitor	K09862 K09862; uncharacterized protein
D      ToN1_18460 putative protein DUF480	K09915 K09915; uncharacterized protein
D      ToN1_46660 Peptidoglycan biosynthesis family protein	K09919 K09919; uncharacterized protein
D      ToN1_30490 putative protein DUF484	K09921 K09921; uncharacterized protein
D      ToN1_14150 putative protein DUF486	K09922 K09922; uncharacterized protein
D      ToN1_36910 Nitrogen fixation family protein	K09926 K09926; uncharacterized protein
D      ToN1_46200 putative protein DUF2062	K09928 K09928; uncharacterized protein
D      ToN1_33740 putative protein UPF0276	K09930 K09930; uncharacterized protein
D      ToN1_33270 putative protein DUF2065	K09937 K09937; uncharacterized protein
D      ToN1_18740 Putative PepSY TM-like protein	K09939 K09939; uncharacterized protein
D      ToN1_49450 putative protein DUF1415	K09941 K09941; uncharacterized protein
D      ToN1_13010 putative protein DUF1508	K09946 K09946; uncharacterized protein
D      ToN1_46040 putative quorum-sensing-regulated virulence factor containing protein	K09954 K09954; uncharacterized protein
D      ToN1_41590 putative protein DUF779	K09959 K09959; uncharacterized protein
D      ToN1_08830 Pyridoxamine 5'-phosphate oxidase-like protein, FMN-binding	K09979 K09979; uncharacterized protein
D      ToN1_47300 CoxE-like protein family protein	K09989 K09989; uncharacterized protein
D      ToN1_32280 ThuA-like protein domain-containing protein	K09992 K09992; uncharacterized protein
D      ToN1_33090 phosphate transport regulator domain-containing protein	K07220 K07220; uncharacterized protein
!
#<hr>
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#Last updated: September 21, 2024