+D GENES KO
#
KEGG Orthology (KO) - Abyssogena phaseoliformis symbiont
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:aphf00010]
D CVPH_1092 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CVPH_1372 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CVPH_1402 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CVPH_1573 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CVPH_1406 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CVPH_1404 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CVPH_1554 gpm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CVPH_0300 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CVPH_1403 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CVPH_0435 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CVPH_1171 aceF; pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVPH_0362 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVPH_0433 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:aphf00020]
D CVPH_1547 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CVPH_1214 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CVPH_0384 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVPH_1278 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CVPH_1277 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CVPH_0962 fumB; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CVPH_0435 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CVPH_1171 aceF; pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:aphf00030]
D CVPH_1092 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CVPH_1555 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CVPH_1407 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CVPH_0135 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CVPH_0433 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVPH_1326 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CVPH_1402 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CVPH_1372 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:aphf00040]
D CVPH_1093 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CVPH_1555 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:aphf00051]
D CVPH_0433 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVPH_1372 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CVPH_1402 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CVPH_1573 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:aphf00052]
D CVPH_1093 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CVPH_0433 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVPH_1372 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:aphf00500]
D CVPH_1093 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CVPH_0433 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVPH_1092 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:aphf00520]
D CVPH_0262 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CVPH_1091 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CVPH_1299 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CVPH_1488 glmU; UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CVPH_0018 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CVPH_0749 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D CVPH_0772 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D CVPH_0773 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D CVPH_0590 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CVPH_0433 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVPH_1093 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CVPH_1092 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CVPH_0915 CDP-4-dehydro-6-deoxyglucose reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:aphf00620]
D CVPH_0362 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVPH_0435 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CVPH_1171 aceF; pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVPH_1403 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CVPH_1312 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CVPH_1543 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CVPH_1544 accC; acetyl CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CVPH_1482 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CVPH_1192 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CVPH_0991 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CVPH_1048 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CVPH_1047 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CVPH_1049 oadC; oxaloacetate decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D CVPH_0962 fumB; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CVPH_0422 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:aphf00630]
D CVPH_0666 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D CVPH_0362 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVPH_1547 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CVPH_1214 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CVPH_1318 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CVPH_0844 rbcL; ribulose-bisphosphate carboxylase large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D CVPH_0736 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVPH_0548 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CVPH_0995 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CVPH_1121 gcvT; glycine cleavage system aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVPH_1120 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:aphf00640]
D CVPH_0362 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVPH_1312 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CVPH_1543 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CVPH_1544 accC; acetyl CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CVPH_1482 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CVPH_1277 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CVPH_1278 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CVPH_1214 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:aphf00650]
D CVPH_0691 fadB; 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CVPH_1047 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CVPH_0418 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVPH_0796 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVPH_0419 ilvH; acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:aphf00660]
D CVPH_0418 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVPH_0796 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVPH_0419 ilvH; acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CVPH_1277 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CVPH_1278 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CVPH_0321 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CVPH_0320 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CVPH_1359 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:aphf00562]
D CVPH_0746 suhB; myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CVPH_1573 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:aphf00190]
D CVPH_0070 nuoA; NADH dehydrogenase I subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CVPH_0069 nuoB; NADH dehydrogenase I subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CVPH_0068 nuoC; NADH dehydrogenase I subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CVPH_0067 nuoD; NADH dehydrogenase I subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CVPH_0066 nuoE; NADH dehydrogenase I subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CVPH_0065 nuoF; NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CVPH_0064 nuoG; NADH dehydrogenase I subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CVPH_0063 nuoH; NADH dehydrogenase I subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CVPH_0062 nuoI; NADH dehydrogenase I subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CVPH_0061 nuoJ; NADH dehydrogenase I subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CVPH_0060 nuoK; NADH dehydrogenase I subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CVPH_0058 nuoL; NADH dehydrogenase I subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CVPH_0057 nuoM; NADH dehydrogenase I subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CVPH_0056 nuoN; NADH dehydrogenase I subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CVPH_0015 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CVPH_0014 petB; ubiquinol-cytochrome c reductase cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CVPH_0013 petC; ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CVPH_0036 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CVPH_0044 coxC; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CVPH_0042 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CVPH_0452 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CVPH_0041 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CVPH_0451 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CVPH_0043 coxD; cytochrome c oxidase subunit XI assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D CVPH_0039 cytochrome c oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CVPH_0047 ccoN; cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CVPH_0048 ccoO; cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CVPH_0050 ccoP; cbb3-type cytochrome c oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CVPH_1515 atpA; F0F1-type ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CVPH_1513 atpD; F0F1-type ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CVPH_1514 atpG; F0F1-type ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CVPH_1516 atpH; F0F1-type ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CVPH_1512 atpC; F0F1-type ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CVPH_1519 atpB; F0F1-type ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CVPH_1517 atpF; F0F1-type ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CVPH_1518 atpE; F0F1-type ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CVPH_0305 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CVPH_1167 ppk; polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:aphf00680]
D CVPH_0548 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CVPH_0300 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CVPH_1402 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CVPH_1372 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CVPH_0362 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVPH_1554 gpm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CVPH_0556 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CVPH_0555 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CVPH_0170 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:aphf00910]
D CVPH_0823 MFS transporter, NNP family, nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CVPH_0444 napB; cytochrome c-type protein NapB K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D CVPH_0736 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVPH_1474 glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CVPH_1072 gltD; glutamate synthase (NADPH/NADH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CVPH_1210 cynT; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:aphf00920]
D CVPH_1382 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CVPH_1328 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CVPH_1379 aprA; adenylylsulfate reductase, subunit A K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D CVPH_1380 aprB; adenylylsulfate reductase, subunit B K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D CVPH_0977 soxA; sulfur oxidation protein SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D CVPH_0980 soxX; sulfur oxidation protein SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D CVPH_0979 soxY; sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D CVPH_0978 soxZ; sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D CVPH_1263 soxB; sulfur oxidation protein SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D CVPH_1071 dsrA; intracellular sulfur oxidation protein DsrA K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D CVPH_1070 dsrB; intracellular sulfur oxidation protein DsrB K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D CVPH_1063 dsrL; intracellular sulfur oxidation protein DsrL K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
D CVPH_1065 dsrM; intracellular sulfur oxidation protein DsrM K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D CVPH_1064 dsrK; intracellular sulfur oxidation protein DsrK K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D CVPH_1062 dsrJ; intracellular sulfur oxidation protein DsrJ K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D CVPH_1061 dsrO; intracellular sulfur oxidation protein DsrO K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D CVPH_1060 dsrP; intracellular sulfur oxidation protein DsrP K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D CVPH_1521 sqr; sulfide-quinone reductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D CVPH_1002 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D CVPH_0448 flavocytochrome c sulphide dehydrogenase flavin-binding protein K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D CVPH_0447 cytochrome c, class I K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D CVPH_0617 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CVPH_0023 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CVPH_1449 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:aphf00061]
D CVPH_1312 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CVPH_1543 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CVPH_1544 accC; acetyl CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CVPH_1482 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CVPH_0633 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CVPH_1114 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CVPH_0755 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CVPH_1451 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CVPH_0632 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase I/II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CVPH_1113 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CVPH_1450 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D CVPH_0643 fabZ; 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CVPH_0525 fabI; enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CVPH_0688 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:aphf00071]
D CVPH_0690 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CVPH_0691 fadB; 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CVPH_0692 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D CVPH_0688 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:aphf00561]
D CVPH_0754 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CVPH_1166 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CVPH_0750 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CVPH_1205 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:aphf00564]
D CVPH_1131 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CVPH_1166 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CVPH_0750 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CVPH_0742 tagD; glycerol-3-phosphate cytidyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D CVPH_1205 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CVPH_0032 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CVPH_0421 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CVPH_0298 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CVPH_1268 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CVPH_0165 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:aphf00592]
D CVPH_0690 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:aphf00230]
D CVPH_1337 nudE; ADP-ribose diphosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D CVPH_0433 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVPH_1326 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CVPH_1448 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CVPH_0501 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CVPH_0163 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CVPH_0344 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CVPH_0164 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CVPH_1033 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CVPH_1032 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CVPH_0028 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CVPH_1213 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CVPH_1179 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CVPH_1107 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CVPH_0781 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CVPH_0332 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CVPH_0136 rdgB; nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CVPH_1111 guaA; GMP synthase (glutamine-hydrolysing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CVPH_0639 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CVPH_0687 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CVPH_0686 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CVPH_0714 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CVPH_0674 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CVPH_1479 pfkB; adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D CVPH_1373 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CVPH_0466 Icc protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D CVPH_0649 apaH; bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D CVPH_1382 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:aphf00240]
D CVPH_1080 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CVPH_1082 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CVPH_1428 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CVPH_0019 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CVPH_0009 pyrD; dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CVPH_0078 pyrK; dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CVPH_1442 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CVPH_0400 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CVPH_0160 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CVPH_0332 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CVPH_0791 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CVPH_0599 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CVPH_1107 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CVPH_0687 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CVPH_0686 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CVPH_0247 comEB; dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CVPH_0127 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CVPH_0570 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CVPH_1005 conserved hypothetical protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:aphf00250]
D CVPH_0392 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVPH_1175 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CVPH_0074 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CVPH_0322 asnB; asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CVPH_1269 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CVPH_0948 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CVPH_0674 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CVPH_1213 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CVPH_1428 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CVPH_1474 glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CVPH_1072 gltD; glutamate synthase (NADPH/NADH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CVPH_0736 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVPH_1080 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CVPH_1082 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CVPH_1091 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CVPH_1448 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:aphf00260]
D CVPH_0609 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CVPH_1158 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CVPH_0928 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CVPH_0929 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CVPH_0548 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CVPH_1554 gpm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CVPH_0556 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CVPH_0555 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CVPH_0170 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CVPH_0995 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CVPH_1121 gcvT; glycine cleavage system aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVPH_1120 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CVPH_0421 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CVPH_0379 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CVPH_1483 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CVPH_1494 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:aphf00270]
D CVPH_0617 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CVPH_1207 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CVPH_0885 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CVPH_0886 abcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CVPH_0609 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CVPH_1158 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CVPH_0928 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CVPH_0023 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CVPH_1449 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D CVPH_0610 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CVPH_1463 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CVPH_1422 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CVPH_0392 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVPH_0930 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D CVPH_0556 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CVPH_0555 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:aphf00280]
D CVPH_0610 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVPH_0690 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:aphf00290]
D CVPH_0379 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CVPH_0321 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CVPH_0320 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CVPH_1359 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CVPH_0418 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVPH_0796 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVPH_0419 ilvH; acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CVPH_0420 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CVPH_0676 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CVPH_0610 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CVPH_0422 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:aphf00300]
D CVPH_0928 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CVPH_0609 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CVPH_1158 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CVPH_0207 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CVPH_1015 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CVPH_1394 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CVPH_0426 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CVPH_0173 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CVPH_0648 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CVPH_1332 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CVPH_1264 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CVPH_1267 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:aphf00310]
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVPH_0771 dat; D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:aphf00220]
D CVPH_0425 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CVPH_1269 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CVPH_0948 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CVPH_0736 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVPH_1080 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CVPH_1082 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CVPH_0392 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVPH_0848 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CVPH_0079 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CVPH_1545 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CVPH_0426 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:aphf00330]
D CVPH_1319 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CVPH_1304 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CVPH_0392 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVPH_0771 dat; D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:aphf00340]
D CVPH_0589 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CVPH_0673 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CVPH_0218 hisE; phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CVPH_0219 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CVPH_1190 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CVPH_1155 hisH; glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CVPH_0034 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CVPH_1156 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CVPH_0558 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVPH_1161 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVPH_0588 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:aphf00350]
D CVPH_0392 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVPH_0558 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVPH_1161 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:aphf00360]
D CVPH_0392 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVPH_0558 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVPH_1161 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVPH_0771 dat; D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00380 Tryptophan metabolism
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:aphf00400]
D CVPH_0243 aroG; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CVPH_0290 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CVPH_1542 aroQ; 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CVPH_0405 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CVPH_0612 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CVPH_0560 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CVPH_0397 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CVPH_0981 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CVPH_1128 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CVPH_1323 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CVPH_1495 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CVPH_1023 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CVPH_1483 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CVPH_1494 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CVPH_0557 pheA; chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CVPH_0559 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CVPH_0392 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVPH_0558 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVPH_1161 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:aphf00410]
D CVPH_1046 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CVPH_0373 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:aphf00450]
D CVPH_1207 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CVPH_1430 trxB; thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CVPH_1382 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CVPH_0683 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CVPH_0629 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:aphf00460]
D CVPH_0074 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CVPH_0548 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:aphf00470]
D CVPH_0467 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CVPH_0771 dat; D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CVPH_0910 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CVPH_0925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CVPH_0648 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CVPH_1332 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:aphf00480]
D CVPH_0681 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CVPH_1463 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CVPH_1422 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CVPH_0116 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CVPH_0411 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CVPH_0271 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CVPH_0223 gor; glutathione reductase (NADPH) K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D CVPH_0384 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:aphf00540]
D CVPH_0642 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CVPH_0417 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CVPH_0644 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CVPH_1118 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CVPH_1330 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CVPH_1038 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CVPH_1260 arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CVPH_1022 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CVPH_1510 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CVPH_1036 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CVPH_0366 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CVPH_0231 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CVPH_0616 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CVPH_1136 eptA; phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CVPH_1102 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:aphf00541]
D CVPH_1093 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CVPH_0915 CDP-4-dehydro-6-deoxyglucose reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D CVPH_1488 glmU; UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:aphf00550]
D CVPH_0590 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CVPH_0908 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CVPH_0925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CVPH_1264 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CVPH_0910 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CVPH_1267 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CVPH_0033 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CVPH_0409 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CVPH_0248 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CVPH_0734 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CVPH_0966 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CVPH_0233 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CVPH_0770 dacA; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:aphf00552]
D CVPH_0409 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:aphf00543]
D CVPH_0617 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:aphf00730]
D CVPH_0365 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CVPH_1162 thiD; bifunctional thiamine biosynthesis ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CVPH_0619 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CVPH_0528 glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D CVPH_0337 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CVPH_1025 thiG; thiamine biosynthesis ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CVPH_1385 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CVPH_0376 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CVPH_0606 rsgA; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CVPH_1373 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:aphf00740]
D CVPH_0729 ribBA; bifunctional riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CVPH_0972 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CVPH_0728 ribH; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CVPH_0730 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CVPH_0021 ribF; bifunctional riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:aphf00750]
D CVPH_0404 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CVPH_0817 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D CVPH_0555 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CVPH_0652 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D CVPH_0576 pdxJ; pyridoxine 5-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CVPH_0929 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:aphf00760]
D CVPH_1175 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CVPH_0346 nadA; quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CVPH_1329 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CVPH_1107 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CVPH_0274 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CVPH_0701 nadE; NAD+ synthase (glutamine-hydrolysing) K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CVPH_0412 cinA; competence/damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CVPH_1523 ppnK; NAD+ kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:aphf00770]
D CVPH_0418 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVPH_0796 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVPH_0419 ilvH; acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CVPH_0420 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CVPH_0676 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CVPH_0372 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CVPH_0373 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CVPH_0285 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CVPH_0973 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CVPH_0303 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CVPH_1408 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CVPH_0577 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CVPH_0610 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CVPH_1046 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:aphf00780]
D CVPH_0155 bioC; biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D CVPH_1451 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CVPH_0632 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase I/II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CVPH_1113 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CVPH_0643 fabZ; 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CVPH_0525 fabI; enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CVPH_1031 bioH; biotin biosynthesis protein BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D CVPH_1030 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CVPH_1317 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CVPH_0010 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CVPH_0735 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CVPH_1204 birA; bifunctional biotin biosynthesis protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:aphf00785]
D CVPH_0656 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CVPH_0655 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVPH_0435 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CVPH_1171 aceF; pyruvate dehydrogenase complex E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CVPH_0995 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CVPH_1121 gcvT; glycine cleavage system aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CVPH_1120 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:aphf00790]
D CVPH_0242 conserved hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D CVPH_1165 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CVPH_0371 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CVPH_1164 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CVPH_1300 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CVPH_1476 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CVPH_1446 folC; dihydrofolate synthase/folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CVPH_0729 ribBA; bifunctional riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CVPH_0709 anthranilate synthase component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D CVPH_0125 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CVPH_0241 queD; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CVPH_0945 phhB; 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CVPH_0407 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D CVPH_0394 queE; queuosine biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CVPH_0634 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CVPH_0760 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CVPH_0829 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CVPH_0828 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CVPH_0825 moaE; molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CVPH_0840 mogA; molybdopterin biosynthesis protein Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CVPH_0827 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CVPH_0826 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:aphf00670]
D CVPH_1476 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CVPH_1035 folD; methenyltetrahydrofolate cyclohydrolase/methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CVPH_0548 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CVPH_0163 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CVPH_1179 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CVPH_0949 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CVPH_1121 gcvT; glycine cleavage system aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CVPH_0570 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CVPH_1051 metF; methylenetetrahydrofolate reductase (NADPH) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CVPH_1182 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:aphf00860]
D CVPH_0765 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CVPH_0877 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CVPH_0129 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CVPH_0364 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CVPH_0946 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CVPH_1053 hemD; uroporphyrinogen-III synthetase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CVPH_1484 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CVPH_0738 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D CVPH_0932 conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CVPH_0694 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CVPH_0168 cysG; uroporphyrin-III C-methyltransferase/precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D CVPH_0036 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CVPH_0039 cytochrome c oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CVPH_1059 dsrN; intracellular sulfur oxidation protein DsrN K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CVPH_0552 cobO; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CVPH_1132 gpmB; probable phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CVPH_0858 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D CVPH_0859 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:aphf00130]
D CVPH_1126 ubiC; chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D CVPH_1396 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CVPH_1185 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D CVPH_0580 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D CVPH_1548 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:aphf00900]
D CVPH_0337 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CVPH_0031 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CVPH_0904 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CVPH_1325 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CVPH_0907 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CVPH_0335 ispG; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CVPH_1480 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CVPH_0756 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CVPH_0312 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CVPH_0033 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CVPH_0608 STE24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:aphf00907]
D CVPH_0690 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CVPH_1407 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
D CVPH_1304 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:aphf00261]
D CVPH_1382 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CVPH_0609 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CVPH_1158 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CVPH_0207 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CVPH_1015 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:aphf00521]
D CVPH_0433 algC; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVPH_0746 suhB; myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:aphf00401]
D CVPH_0559 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CVPH_0392 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVPH_0558 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVPH_1161 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CVPH_0981 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CVPH_1128 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CVPH_1114 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CVPH_1113 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CVPH_0525 fabI; enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CVPH_0633 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:aphf00999]
D CVPH_0885 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CVPH_0405 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:aphf00362]
D CVPH_0690 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CVPH_0691 fadB; 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CVPH_1047 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D CVPH_1071 dsrA; intracellular sulfur oxidation protein DsrA K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D CVPH_1070 dsrB; intracellular sulfur oxidation protein DsrB K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D CVPH_1063 dsrL; intracellular sulfur oxidation protein DsrL K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
C 00642 Ethylbenzene degradation
D CVPH_0690 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:aphf03020]
D CVPH_0983 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CVPH_0982 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CVPH_1228 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CVPH_0356 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:aphf03010]
D CVPH_0600 rpsA; small subunit ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CVPH_1558 rpsB; small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CVPH_1247 rpsC; small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CVPH_1229 rpsD; small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CVPH_1236 rpsE; small subunit ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CVPH_0471 rpsF; small subunit ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CVPH_1257 rpsG; small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CVPH_1239 rpsH; small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CVPH_1134 rpsI; small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CVPH_1254 rpsJ; small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CVPH_1230 rpsK; small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CVPH_1258 rpsL; small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CVPH_1231 rpsM; small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CVPH_1240 rpsN; small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CVPH_0230 rpsO; small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CVPH_1244 rpsQ; small subunit ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CVPH_0470 rpsR; small subunit ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CVPH_1249 rpsS; small subunit ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CVPH_0897 rpsT; small subunit ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CVPH_1226 rpsU; small subunit ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CVPH_0986 rplA; large subunit ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CVPH_1250 rplB; large subunit ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CVPH_1253 rplC; large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CVPH_1252 rplD; large subunit ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CVPH_1241 rplE; large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CVPH_1238 rplF; large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CVPH_0984 rplL; large subunit ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CVPH_0469 rplI; large subunit ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CVPH_0985 rplJ; large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CVPH_0987 rplK; large subunit ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CVPH_1135 rplM; large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CVPH_1243 rplN; large subunit ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CVPH_1234 rplO; large subunit ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CVPH_1246 rplP; large subunit ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CVPH_1227 rplQ; large subunit ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CVPH_1237 rplR; large subunit ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CVPH_1073 rplS; large subunit ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CVPH_0534 rplT; large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CVPH_1116 rplU; large subunit ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CVPH_1248 rplV; large subunit ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CVPH_1251 rplW; large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CVPH_1242 rplX; large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CVPH_1551 rplY; large subunit ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CVPH_1115 rpmA; large subunit ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CVPH_1216 rpmB; large subunit ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CVPH_1245 rpmC; large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CVPH_1235 rpmD; large subunit ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CVPH_1485 rpmE; large subunit ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CVPH_0753 rpmF; large subunit ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CVPH_1215 rpmG; large subunit ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CVPH_1504 rpmH; large subunit ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CVPH_0533 rpmI; large subunit ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CVPH_1232 rpmJ; large subunit ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:aphf00970]
D CVPH_t03 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CVPH_t34 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CVPH_t07 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVPH_t10 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVPH_t09 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CVPH_t13 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CVPH_t29 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CVPH_t06 tRNA-His K14226 tRNA-His; tRNA His
D CVPH_t35 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CVPH_t02 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVPH_t23 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVPH_t16 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CVPH_t32 tRNA-Met K14230 tRNA-Met; tRNA Met
D CVPH_t31 tRNA-Met K14230 tRNA-Met; tRNA Met
D CVPH_t08 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CVPH_t14 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CVPH_t22 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CVPH_t25 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CVPH_t01 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CVPH_t18 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CVPH_t21 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CVPH_t12 tRNA-Val K14237 tRNA-Val; tRNA Val
D CVPH_t11 tRNA-Val K14237 tRNA-Val; tRNA Val
D CVPH_0765 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CVPH_0293 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CVPH_0294 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CVPH_0292 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CVPH_1103 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CVPH_1088 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CVPH_0347 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CVPH_0887 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CVPH_0868 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CVPH_0531 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CVPH_1455 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CVPH_1362 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CVPH_0629 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CVPH_0949 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CVPH_0779 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CVPH_0008 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CVPH_0289 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CVPH_0597 lysS; lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CVPH_1388 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CVPH_0297 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CVPH_0787 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CVPH_0536 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CVPH_0537 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CVPH_1305 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CVPH_0286 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:aphf03060]
D CVPH_1233 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CVPH_0989 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CVPH_1572 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CVPH_1453 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CVPH_1452 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CVPH_1454 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CVPH_1507 yidC; protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CVPH_0017 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CVPH_0586 ffh; signal recognition particle, subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CVPH_0940 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CVPH_0217 tatA; conserved hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CVPH_0216 tatB; conserved hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D CVPH_0215 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CVPH_0563 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CVPH_0527 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:aphf04122]
D CVPH_0619 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CVPH_0133 tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CVPH_0737 tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CVPH_1067 dsrH; intracellular sulfur oxidation protein DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D CVPH_1068 dsrF; intracellular sulfur oxidation protein DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D CVPH_1069 dsrE; intracellular sulfur oxidation protein DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D CVPH_0562 tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D CVPH_0895 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CVPH_1085 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CVPH_0825 moaE; molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CVPH_0829 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CVPH_0830 moaD; molybdenum cofactor biosynthesis protein D K03636 moaD; sulfur-carrier protein
D CVPH_0544 moeB; molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CVPH_0828 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CVPH_0840 mogA; molybdopterin biosynthesis protein Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CVPH_1084 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:aphf03018]
D CVPH_0406 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CVPH_0300 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CVPH_0439 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CVPH_1307 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CVPH_0675 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CVPH_1143 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CVPH_0762 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CVPH_0302 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CVPH_0636 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CVPH_1167 ppk; polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CVPH_0759 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:aphf03030]
D CVPH_0355 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVPH_0361 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVPH_0975 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CVPH_0774 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CVPH_0128 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CVPH_1303 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CVPH_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CVPH_0468 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CVPH_0232 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CVPH_0717 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CVPH_0323 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CVPH_1389 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVPH_0209 ligB; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:aphf03410]
D CVPH_1152 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CVPH_0816 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CVPH_0022 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CVPH_0279 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CVPH_1443 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CVPH_1389 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVPH_0530 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CVPH_0209 ligB; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:aphf03420]
D CVPH_1478 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CVPH_0161 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CVPH_0393 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CVPH_0592 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CVPH_1389 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVPH_0209 ligB; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:aphf03430]
D CVPH_1151 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D CVPH_0899 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CVPH_0757 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CVPH_0530 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CVPH_0717 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CVPH_0975 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CVPH_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CVPH_0774 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CVPH_1303 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CVPH_0128 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CVPH_0355 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVPH_0361 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVPH_0209 ligB; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:aphf03440]
D CVPH_0530 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CVPH_0717 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CVPH_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CVPH_0575 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CVPH_0776 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CVPH_0971 recA; recombination protein RecA K03553 recA; recombination protein RecA
D CVPH_1389 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVPH_0319 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CVPH_0875 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CVPH_0862 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CVPH_1125 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CVPH_0975 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CVPH_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CVPH_0774 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CVPH_1303 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CVPH_0128 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CVPH_0355 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVPH_0361 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVPH_1315 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:aphf02010]
D CVPH_0850 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CVPH_0849 afuB; iron(III) transport system permease protein K02011 afuB; iron(III) transport system permease protein
D CVPH_0851 afuC; iron(III) transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CVPH_0591 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D CVPH_0156 znuA; zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CVPH_0879 znuB; zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D CVPH_1390 znuC; zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CVPH_1040 lolCE; lipoprotein-releasing system permease protein LolC/E K09808 lolC_E; lipoprotein-releasing system permease protein
D CVPH_1041 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CVPH_0474 ccmC; heme exporter membrane protein CcmC K02195 ccmC; heme exporter protein C
D CVPH_0884 ccmB; heme exporter membrane protein CcmB K02194 ccmB; heme exporter protein B
D CVPH_0883 ccmA; heme exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D CVPH_0761 lptF; lipopolysaccharide export system permease protein K07091 lptF; lipopolysaccharide export system permease protein
D CVPH_1110 lptG; lipopolysaccharide export system permease protein K11720 lptG; lipopolysaccharide export system permease protein
D CVPH_1202 lptB; lipopolysaccharide export system ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CVPH_0794 msbA; ATP-binding cassette, subfamily B, bacterial MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CVPH_0968 ATP-binding cassette subfamily B, bacterial K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CVPH_0149 hlyB; ABC transporter ATP-binding protein HlyB/MsbA family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:aphf03070]
D CVPH_1453 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CVPH_1452 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CVPH_0989 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CVPH_1572 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CVPH_1233 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CVPH_1454 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CVPH_1507 yidC; protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CVPH_0017 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CVPH_0940 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CVPH_0586 ffh; signal recognition particle, subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CVPH_0217 tatA; conserved hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CVPH_0216 tatB; conserved hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D CVPH_0215 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:aphf02020]
D CVPH_0039 cytochrome c oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CVPH_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CVPH_1461 narX; two-component system, nitrate/nitrite sensor histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D CVPH_1460 narL; two-component system, nitrate/nitrite response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D CVPH_0764 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CVPH_0736 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVPH_0238 C4-dicarboxylate transporter, DctQ subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D CVPH_0015 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CVPH_0014 petB; ubiquinol-cytochrome c reductase cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CVPH_0013 petC; ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CVPH_0047 ccoN; cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CVPH_0048 ccoO; cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CVPH_0050 ccoP; cbb3-type cytochrome c oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CVPH_1259 protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CVPH_0015 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:aphf02024]
D CVPH_0981 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CVPH_1128 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CVPH_0243 aroG; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CVPH_0688 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CVPH_0972 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CVPH_1507 yidC; protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CVPH_0989 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CVPH_1572 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CVPH_1233 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CVPH_1454 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CVPH_0017 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CVPH_0940 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CVPH_0586 ffh; signal recognition particle, subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D CVPH_1327 rpoD; DNA-directed RNA polymerase sigma-70 factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CVPH_0300 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:aphf01501]
D CVPH_0261 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CVPH_0262 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CVPH_0966 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CVPH_0233 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:aphf01502]
D CVPH_0910 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CVPH_0467 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CVPH_1267 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CVPH_0248 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CVPH_0734 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:aphf01503]
D CVPH_1136 eptA; phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CVPH_1057 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CVPH_1163 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D CVPH_0642 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:aphf01000]
C 01001 Protein kinases [BR:aphf01001]
D CVPH_0513 serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CVPH_1461 narX; two-component system, nitrate/nitrite sensor histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:aphf01009]
D CVPH_0886 abcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CVPH_0741 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CVPH_0170 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:aphf01002]
D CVPH_0527 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CVPH_1111 guaA; GMP synthase (glutamine-hydrolysing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CVPH_1448 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CVPH_1474 glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CVPH_1091 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CVPH_0322 asnB; asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CVPH_0411 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CVPH_0630 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D CVPH_0936 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D CVPH_0937 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D CVPH_0116 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CVPH_0173 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CVPH_0349 map; methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CVPH_1322 pepP; X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CVPH_1301 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CVPH_0608 STE24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D CVPH_0350 conserved hypothetical protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D CVPH_0134 peptidase M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D CVPH_0646 rseP; regulator of sigma E protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CVPH_0770 dacA; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CVPH_0109 clpP; ATP-dependent Clp protease, protease subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CVPH_0112 lon; ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CVPH_0563 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CVPH_0566 prd; carboxyl-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CVPH_0882 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D CVPH_0338 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CVPH_1186 pmbA; modulator of DNA gyrase K03592 pmbA; PmbA protein
D CVPH_0071 modulator of DNA gyrase, PmbA/TldD family K03568 tldD; TldD protein
D CVPH_0672 hflC; membrane protease subunit HflC K04087 hflC; modulator of FtsH protease HflC
D CVPH_0671 hflK; membrane protease subunit HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases
C 01005 Lipopolysaccharide biosynthesis proteins [BR:aphf01005]
D CVPH_0642 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CVPH_1330 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CVPH_0417 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CVPH_0644 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CVPH_1118 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CVPH_1038 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CVPH_0231 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CVPH_0616 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CVPH_0366 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CVPH_1136 eptA; phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CVPH_1022 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CVPH_1036 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CVPH_1510 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CVPH_1260 arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CVPH_1102 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:aphf01011]
D CVPH_0590 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CVPH_0908 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CVPH_0925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CVPH_1264 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CVPH_0910 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CVPH_0467 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CVPH_0248 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CVPH_0734 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CVPH_0409 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CVPH_0641 mviN; virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D CVPH_0966 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CVPH_0233 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CVPH_0770 dacA; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CVPH_1426 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D CVPH_0769 mltB; membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D CVPH_0913 mltD; membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CVPH_1057 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CVPH_1509 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:aphf01004]
D CVPH_1114 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CVPH_0755 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CVPH_1451 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CVPH_0632 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase I/II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CVPH_1113 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CVPH_1450 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D CVPH_0643 fabZ; 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CVPH_0525 fabI; enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CVPH_0362 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVPH_0688 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CVPH_0754 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CVPH_1166 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CVPH_0750 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:aphf01006]
D CVPH_0756 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CVPH_0312 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CVPH_0033 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CVPH_0916 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CVPH_1396 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CVPH_0036 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:aphf01007]
D CVPH_0765 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CVPH_1103 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CVPH_1305 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CVPH_0286 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CVPH_1362 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CVPH_1388 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CVPH_0629 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CVPH_0289 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CVPH_0779 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CVPH_0008 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CVPH_0597 lysS; lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CVPH_0347 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CVPH_0787 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CVPH_0887 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CVPH_0868 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CVPH_1455 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CVPH_0297 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CVPH_0531 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CVPH_1088 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CVPH_0536 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CVPH_0537 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CVPH_0392 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVPH_0025 alaC; aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D CVPH_0558 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVPH_1161 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVPH_1030 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CVPH_0426 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CVPH_1317 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CVPH_0129 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CVPH_0771 dat; D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CVPH_0610 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CVPH_0555 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:aphf00194]
D CVPH_1512 atpC; F0F1-type ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CVPH_1513 atpD; F0F1-type ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CVPH_1514 atpG; F0F1-type ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CVPH_1515 atpA; F0F1-type ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CVPH_1516 atpH; F0F1-type ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CVPH_1517 atpF; F0F1-type ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CVPH_1518 atpE; F0F1-type ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CVPH_1519 atpB; F0F1-type ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:aphf03000]
D CVPH_1208 metR; transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D CVPH_0845 cbbR; transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CVPH_0880 fur; Fur family transcriptional regulator, ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CVPH_0618 iscR; BadM/Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D CVPH_1204 birA; bifunctional biotin biosynthesis protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CVPH_1178 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CVPH_0117 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D CVPH_0914 bolA; BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D CVPH_0564 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CVPH_0377 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CVPH_0549 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D CVPH_0236 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:aphf03021]
D CVPH_1228 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CVPH_0983 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CVPH_0982 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CVPH_0356 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CVPH_1327 rpoD; DNA-directed RNA polymerase sigma-70 factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CVPH_0638 rpoH; DNA-directed RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D CVPH_1420 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D CVPH_0727 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CVPH_0988 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CVPH_0012 sapA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D CVPH_0011 sapB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D CVPH_0434 rseC; sigma-E factor negative regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D CVPH_0377 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CVPH_1079 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CVPH_0762 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:aphf03019]
D CVPH_0406 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CVPH_0573 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CVPH_0675 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CVPH_1324 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CVPH_1307 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CVPH_1143 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CVPH_0300 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CVPH_0439 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CVPH_0762 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CVPH_0302 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CVPH_0636 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CVPH_1167 ppk; polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CVPH_0759 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:aphf03011]
D CVPH_0600 rpsA; small subunit ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CVPH_1558 rpsB; small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CVPH_1247 rpsC; small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CVPH_1229 rpsD; small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CVPH_1236 rpsE; small subunit ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CVPH_0471 rpsF; small subunit ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CVPH_1257 rpsG; small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CVPH_1239 rpsH; small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CVPH_1134 rpsI; small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CVPH_1254 rpsJ; small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CVPH_1230 rpsK; small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CVPH_1258 rpsL; small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CVPH_1231 rpsM; small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CVPH_1240 rpsN; small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CVPH_0230 rpsO; small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CVPH_1244 rpsQ; small subunit ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CVPH_0470 rpsR; small subunit ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CVPH_1249 rpsS; small subunit ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CVPH_0897 rpsT; small subunit ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CVPH_1226 rpsU; small subunit ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CVPH_0986 rplA; large subunit ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CVPH_1250 rplB; large subunit ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CVPH_1253 rplC; large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CVPH_1252 rplD; large subunit ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CVPH_1241 rplE; large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CVPH_1238 rplF; large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CVPH_0469 rplI; large subunit ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CVPH_0985 rplJ; large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CVPH_0987 rplK; large subunit ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CVPH_0984 rplL; large subunit ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CVPH_1135 rplM; large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CVPH_1243 rplN; large subunit ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CVPH_1234 rplO; large subunit ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CVPH_1246 rplP; large subunit ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CVPH_1227 rplQ; large subunit ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CVPH_1237 rplR; large subunit ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CVPH_1073 rplS; large subunit ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CVPH_0534 rplT; large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CVPH_1116 rplU; large subunit ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CVPH_1248 rplV; large subunit ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CVPH_1251 rplW; large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CVPH_1242 rplX; large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CVPH_1115 rpmA; large subunit ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CVPH_1216 rpmB; large subunit ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CVPH_1245 rpmC; large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CVPH_1235 rpmD; large subunit ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CVPH_1485 rpmE; large subunit ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CVPH_0753 rpmF; large subunit ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CVPH_1215 rpmG; large subunit ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CVPH_1504 rpmH; large subunit ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CVPH_0533 rpmI; large subunit ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CVPH_1232 rpmJ; large subunit ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CVPH_1551 rplY; large subunit ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:aphf03009]
D CVPH_0573 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CVPH_1324 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CVPH_0574 era; GTP-binding protein Era K03595 era; GTPase
D CVPH_0367 obg; GTP-binding protein, GTP1/Obg family K03979 obgE; GTPase [EC:3.6.5.-]
D CVPH_0377 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CVPH_1420 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D CVPH_0727 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CVPH_0988 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CVPH_0651 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CVPH_0339 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D CVPH_0304 rsmD; ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CVPH_1400 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CVPH_0235 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CVPH_1410 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CVPH_0668 rlmB; RNA methyltransferase, TrmH family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CVPH_0313 ftsJ; cell division protein methyltransferase FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D CVPH_0333 rlmN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CVPH_0258 rumA; RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CVPH_0288 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CVPH_1397 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CVPH_0276 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CVPH_1086 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CVPH_0406 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CVPH_1427 ruvX; Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CVPH_1181 dbpA; ATP-independent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D CVPH_1143 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CVPH_0606 rsgA; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CVPH_0789 engA; GTP-binding protein EngA K03977 engA; GTPase
D CVPH_0111 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D CVPH_0739 tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CVPH_0714 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CVPH_1418 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CVPH_1421 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D CVPH_0273 ybeB; ribosome-associated protein K09710 ybeB; ribosome-associated protein
D CVPH_1314 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D CVPH_1331 conserved hypothetical protein K07574 yhbY; RNA-binding protein
D CVPH_0428 putative sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D CVPH_1553 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
D CVPH_0752 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:aphf03016]
D CVPH_0100 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CVPH_0765 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CVPH_0297 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CVPH_0289 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CVPH_0008 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CVPH_0629 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CVPH_1103 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CVPH_1388 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CVPH_0597 lysS; lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CVPH_0347 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CVPH_1088 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CVPH_0531 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CVPH_1455 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CVPH_1362 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CVPH_0779 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CVPH_0787 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CVPH_0536 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CVPH_0537 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CVPH_1305 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CVPH_0286 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CVPH_0867 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CVPH_0996 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CVPH_1444 trmB; tRNA (guanine-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CVPH_1206 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CVPH_0619 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CVPH_0739 tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CVPH_0916 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CVPH_1462 mnmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CVPH_1401 gidA; glucose inhibited division protein A GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CVPH_0683 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CVPH_1328 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CVPH_1505 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CVPH_0678 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D CVPH_1119 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D CVPH_0887 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CVPH_0868 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CVPH_1112 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CVPH_0415 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D CVPH_0891 miaB; bifunctional enzyme involved in thiolation and methylation of tRNA K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CVPH_1127 cmoA; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D CVPH_0157 cmoB; methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D CVPH_0174 trmD; tRNA (guanine-N1-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CVPH_0745 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D CVPH_0952 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CVPH_0895 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CVPH_1085 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CVPH_0133 tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CVPH_0737 tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CVPH_1067 dsrH; intracellular sulfur oxidation protein DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D CVPH_1068 dsrF; intracellular sulfur oxidation protein DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D CVPH_1069 dsrE; intracellular sulfur oxidation protein DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D CVPH_0562 tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D CVPH_0621 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D CVPH_0283 conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D CVPH_0634 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CVPH_0241 queD; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CVPH_0394 queE; queuosine biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CVPH_0760 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CVPH_0684 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D CVPH_0967 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CVPH_1313 tilS; cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CVPH_0473 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CVPH_1201 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CVPH_1056 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CVPH_1138 ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CVPH_0675 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CVPH_0439 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:aphf03012]
D CVPH_1419 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CVPH_0532 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CVPH_1559 tsf; elongation factor EF-Ts K02357 tsf; elongation factor Ts
D CVPH_0990 elongation factor EF-Tu K02358 tuf; elongation factor Tu
D CVPH_1255 elongation factor EF-Tu K02358 tuf; elongation factor Tu
D CVPH_1256 fusA; elongation factor EF-G K02355 fusA; elongation factor G
D CVPH_0878 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D CVPH_0159 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CVPH_0958 hemK; HemK protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CVPH_1552 pth; peptidyl-tRNA hydrolase, PTH1 family K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CVPH_1050 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CVPH_1274 efp; translation elongation factor EF-P K02356 efp; elongation factor P
D CVPH_1273 genX; lysyl-tRNA synthetase, class II K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D CVPH_0268 kamA; lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D CVPH_0229 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
D CVPH_0246 prfC; peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:aphf03110]
D CVPH_1108 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CVPH_0953 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CVPH_0110 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CVPH_0741 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CVPH_0302 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CVPH_0623 hscA; molecular chaperone HscA K04044 hscA; molecular chaperone HscA
D CVPH_0636 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CVPH_0301 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CVPH_0622 hscB; molecular chaperone HscB K04082 hscB; molecular chaperone HscB
D CVPH_1524 grpE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CVPH_0637 groES; chaperonin GroES K04078 groES; chaperonin GroES
D CVPH_1301 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CVPH_1519 atpB; F0F1-type ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CVPH_0893 conserved hypothetical protein K09796 pccA; periplasmic copper chaperone A
D CVPH_1117 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CVPH_0522 ppiD; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CVPH_0026 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D CVPH_1481 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D CVPH_1377 sylD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CVPH_0669 surA; peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CVPH_0763 trxA; thioredoxin K03671 TXN; thioredoxin
D CVPH_0863 thioredoxin K03671 TXN; thioredoxin
D CVPH_1458 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D CVPH_1130 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D CVPH_1358 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D CVPH_0340 grxD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D CVPH_1163 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D CVPH_0115 dsbC; thiol-disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CVPH_1541 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D CVPH_0476 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:aphf04131]
D CVPH_0332 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CVPH_1406 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CVPH_1403 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CVPH_0741 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:aphf03051]
D CVPH_0741 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:aphf03032]
D CVPH_0323 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CVPH_0331 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVPH_0477 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVPH_0538 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CVPH_0601 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CVPH_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CVPH_0468 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CVPH_0232 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CVPH_0717 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CVPH_0975 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CVPH_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CVPH_1303 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CVPH_0128 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CVPH_0355 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVPH_0361 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVPH_0774 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CVPH_1389 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVPH_0209 ligB; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CVPH_0166 hda; DnaA-homolog protein K10763 hda; DnaA-homolog protein
D CVPH_0244 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CVPH_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CVPH_0240 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CVPH_0635 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CVPH_1501 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:aphf03036]
D CVPH_0573 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CVPH_0331 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVPH_0477 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVPH_0538 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CVPH_0601 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CVPH_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CVPH_1178 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CVPH_0416 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CVPH_0903 conserved hypothetical protein K05589 ftsB; cell division protein FtsB
D CVPH_0233 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CVPH_1431 ftsK; cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CVPH_0911 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CVPH_0733 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CVPH_1057 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CVPH_0869 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CVPH_0963 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CVPH_0964 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CVPH_0965 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CVPH_0768 rodA; rod shape determining protein RodA K05837 rodA; rod shape determining protein RodA
D CVPH_0564 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CVPH_0240 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CVPH_0635 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CVPH_1401 gidA; glucose inhibited division protein A GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CVPH_1400 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CVPH_0740 xerC; integrase/recombinase XerC K03733 xerC; integrase/recombinase XerC
D CVPH_1074 xerD; integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD
D CVPH_0628 mrp; ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CVPH_0104 engB; GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:aphf03400]
D CVPH_1511 methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CVPH_0816 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CVPH_0022 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CVPH_1152 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CVPH_1464 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CVPH_0279 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CVPH_1443 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CVPH_0530 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CVPH_0209 ligB; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CVPH_1389 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVPH_0161 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CVPH_0393 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CVPH_0592 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CVPH_0983 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CVPH_0982 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CVPH_1228 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CVPH_0356 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CVPH_1478 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CVPH_1151 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D CVPH_0899 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CVPH_0757 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CVPH_0975 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CVPH_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CVPH_1303 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CVPH_0128 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CVPH_0355 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVPH_0361 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVPH_0774 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CVPH_0717 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CVPH_0971 recA; recombination protein RecA K03553 recA; recombination protein RecA
D CVPH_0319 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CVPH_0875 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CVPH_0862 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CVPH_1315 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CVPH_0551 sms; DNA repair protein RadA/Sms K04485 radA; DNA repair protein RadA/Sms
D CVPH_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CVPH_1125 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CVPH_0575 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CVPH_0776 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CVPH_0244 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CVPH_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CVPH_1501 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CVPH_0331 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVPH_0477 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVPH_1178 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CVPH_0538 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CVPH_0601 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CVPH_0970 recX; regulatory protein K03565 recX; regulatory protein
D CVPH_0311 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CVPH_0687 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CVPH_0686 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:aphf03029]
D CVPH_0014 petB; ubiquinol-cytochrome c reductase cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CVPH_1419 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CVPH_0532 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CVPH_1559 tsf; elongation factor EF-Ts K02357 tsf; elongation factor Ts
D CVPH_0990 elongation factor EF-Tu K02358 tuf; elongation factor Tu
D CVPH_1255 elongation factor EF-Tu K02358 tuf; elongation factor Tu
D CVPH_1256 fusA; elongation factor EF-G K02355 fusA; elongation factor G
D CVPH_0574 era; GTP-binding protein Era K03595 era; GTPase
D CVPH_1305 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CVPH_0008 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CVPH_0347 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CVPH_1388 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CVPH_0293 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CVPH_0294 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CVPH_0292 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CVPH_0717 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein
D CVPH_0645 yaeT; outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D CVPH_0302 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CVPH_1524 grpE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CVPH_0636 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CVPH_0637 groES; chaperonin GroES K04078 groES; chaperonin GroES
D CVPH_0301 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CVPH_0619 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CVPH_0622 hscB; molecular chaperone HscB K04082 hscB; molecular chaperone HscB
D CVPH_0340 grxD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D CVPH_0628 mrp; ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CVPH_0036 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CVPH_0043 coxD; cytochrome c oxidase subunit XI assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D CVPH_0039 cytochrome c oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D CVPH_1507 yidC; protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CVPH_0046 conserved hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D CVPH_0038 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D CVPH_0892 conserved hypothetical protein K07152 SCO1; protein SCO1
D CVPH_0741 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:aphf02000]
D CVPH_0794 msbA; ATP-binding cassette, subfamily B, bacterial MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CVPH_0968 ATP-binding cassette subfamily B, bacterial K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CVPH_0149 hlyB; ABC transporter ATP-binding protein HlyB/MsbA family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D CVPH_0594 uup; ABC transporter ATPase component K15738 uup; ABC transport system ATP-binding/permease protein
D CVPH_0850 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CVPH_0849 afuB; iron(III) transport system permease protein K02011 afuB; iron(III) transport system permease protein
D CVPH_0851 afuC; iron(III) transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CVPH_0591 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D CVPH_0156 znuA; zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CVPH_0879 znuB; zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D CVPH_1390 znuC; zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CVPH_0761 lptF; lipopolysaccharide export system permease protein K07091 lptF; lipopolysaccharide export system permease protein
D CVPH_1110 lptG; lipopolysaccharide export system permease protein K11720 lptG; lipopolysaccharide export system permease protein
D CVPH_1202 lptB; lipopolysaccharide export system ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CVPH_1040 lolCE; lipoprotein-releasing system permease protein LolC/E K09808 lolC_E; lipoprotein-releasing system permease protein
D CVPH_1041 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CVPH_0474 ccmC; heme exporter membrane protein CcmC K02195 ccmC; heme exporter protein C
D CVPH_0884 ccmB; heme exporter membrane protein CcmB K02194 ccmB; heme exporter protein B
D CVPH_0883 ccmA; heme exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D CVPH_1169 antibiotic transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CVPH_1170 antibiotic transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CVPH_0823 MFS transporter, NNP family, nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CVPH_0261 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CVPH_0206 ammonium transporter, Amt family K03320 amt; ammonium transporter, Amt family
D CVPH_0271 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CVPH_0012 sapA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D CVPH_0926 conserved hypothetical protein K19416 yccA; modulator of FtsH protease
D CVPH_0890 small-conductance mechanosensitive channel K16052 ynaI; MscS family membrane protein
D CVPH_0429 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D CVPH_0873 tolQ; biopolymer transport protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D CVPH_0872 tolR; biopolymer transport protein TolR K03560 tolR; biopolymer transport protein TolR
D CVPH_1423 crcB; camphor resistance protein CrcB K06199 crcB; fluoride exporter
D CVPH_0299 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CVPH_0554 iron complex outermembrane recepter protein K16092 btuB; vitamin B12 transporter
D CVPH_0152 type I secretion outer membrane protein, TolC K12543 lapE; outer membrane protein, adhesin transport system
D CVPH_0645 yaeT; outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D CVPH_0208 nlpB; conserved hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC
D CVPH_0715 comL; lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D CVPH_0881 smpA; small protein A K06186 bamE; outer membrane protein assembly factor BamE
D CVPH_1383 lptA; lipopolysaccharide export system protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D CVPH_1384 conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D CVPH_0670 LPS-assembly protein K04744 lptD; LPS-assembly protein
D CVPH_1302 lptE; LPS-assembly lipoprotein K03643 lptE; LPS-assembly lipoprotein
D CVPH_1188 corC; magnesium/cobalt transporter K06189 corC; hemolysin (HlyC) family protein
D CVPH_1055 Ca2+:Na+ antiporter K07301 yrbG; cation:H+ antiporter
D CVPH_0310 trkH; trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D CVPH_0309 trkA; trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D CVPH_0931 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D CVPH_1144 sulP; sulfate permease, SulP family K03321 TC.SULP; sulfate permease, SulP family
D CVPH_0238 C4-dicarboxylate transporter, DctQ subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D CVPH_0641 mviN; virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D CVPH_0733 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CVPH_0711 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D CVPH_0712 tolB; TolB protein K03641 tolB; TolB protein
D CVPH_1375 ppA; inorganic pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CVPH_1047 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CVPH_1048 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CVPH_1049 oadC; oxaloacetate decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D CVPH_0148 hlyD; type I secretion membrane fusion protein, HlyD family protein K12542 lapC; membrane fusion protein, adhesin transport system
D CVPH_0171 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:aphf02044]
D CVPH_0149 hlyB; ABC transporter ATP-binding protein HlyB/MsbA family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D CVPH_0148 hlyD; type I secretion membrane fusion protein, HlyD family protein K12542 lapC; membrane fusion protein, adhesin transport system
D CVPH_0152 type I secretion outer membrane protein, TolC K12543 lapE; outer membrane protein, adhesin transport system
D CVPH_0247 comEB; dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CVPH_0115 dsbC; thiol-disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CVPH_0017 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CVPH_1453 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CVPH_0989 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CVPH_1452 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CVPH_1572 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CVPH_1233 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CVPH_0586 ffh; signal recognition particle, subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CVPH_0940 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CVPH_1454 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CVPH_1507 yidC; protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CVPH_0217 tatA; conserved hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CVPH_0216 tatB; conserved hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D CVPH_0215 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:aphf02042]
D CVPH_0299 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:aphf02022]
D CVPH_1461 narX; two-component system, nitrate/nitrite sensor histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D CVPH_1460 narL; two-component system, nitrate/nitrite response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D CVPH_0214 nasT; response regulator NasT K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:aphf04812]
D CVPH_0963 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CVPH_0416 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CVPH_0869 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CVPH_0564 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:aphf04147]
D CVPH_0741 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CVPH_0300 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CVPH_1406 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CVPH_1404 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CVPH_1403 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CVPH_1361 ahpC; peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CVPH_0636 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CVPH_0302 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CVPH_1092 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CVPH_0781 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CVPH_0990 elongation factor EF-Tu K02358 tuf; elongation factor Tu
D CVPH_1255 elongation factor EF-Tu K02358 tuf; elongation factor Tu
D CVPH_0996 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CVPH_0688 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CVPH_0886 abcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CVPH_1373 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CVPH_0948 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CVPH_1269 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CVPH_0736 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVPH_0364 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CVPH_0945 phhB; 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CVPH_0556 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CVPH_1179 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CVPH_0608 STE24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D CVPH_1172 lpdA; pyruvate dehydrogenase complex E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVPH_1573 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:aphf02048]
D CVPH_0584 plasmid stabilization system protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D CVPH_0513 serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CVPH_0963 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CVPH_0240 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CVPH_0635 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CVPH_0765 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CVPH_0619 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:aphf03100]
D CVPH_t03 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CVPH_t34 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CVPH_t07 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVPH_t10 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVPH_t09 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CVPH_t13 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CVPH_t29 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CVPH_t06 tRNA-His K14226 tRNA-His; tRNA His
D CVPH_t35 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CVPH_t02 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVPH_t23 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVPH_t16 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CVPH_t32 tRNA-Met K14230 tRNA-Met; tRNA Met
D CVPH_t31 tRNA-Met K14230 tRNA-Met; tRNA Met
D CVPH_t08 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CVPH_t14 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CVPH_t22 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CVPH_t25 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CVPH_t01 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CVPH_t18 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CVPH_t21 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CVPH_t12 tRNA-Val K14237 tRNA-Val; tRNA Val
D CVPH_t11 tRNA-Val K14237 tRNA-Val; tRNA Val
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CVPH_0543 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CVPH_0099 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CVPH_0939 yedY; sulfite oxidase subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D CVPH_0581 peroxiredoxin Q/BCP K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CVPH_1173 pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CVPH_0569 lgt; beta-galactosamide-alpha-2,3-sialyltransferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CVPH_1425 apbE; thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CVPH_0295 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CVPH_1398 TatD DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CVPH_0196 phage related lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CVPH_1176 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CVPH_1477 maf; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D CVPH_1284 rnfD; electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D CVPH_1285 rnfC; electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CVPH_1286 rnfB; electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CVPH_1486 Cu2+-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CVPH_0454 Cu2+-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D CVPH_0624 fdx; ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D CVPH_0685 ferredoxin K11107 yfaE; ferredoxin
D CVPH_1283 rnfG; electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CVPH_0956 rnfE; electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CVPH_1287 rnfA; electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CVPH_0620 iscU; nitrogen fixation protein NifU and related proteins K04488 iscU; nitrogen fixation protein NifU and related proteins
D CVPH_0842 cbbO; RuBisCo regulator CbbO K02448 norD; nitric oxide reductase NorD protein
D CVPH_0843 cbbQ; RuBisCo regulator CbbQ K04748 norQ; nitric oxide reductase NorQ protein
D CVPH_0440 napD; periplasmic nitrate reductase NapD K02570 napD; periplasmic nitrate reductase NapD
D CVPH_0445 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D CVPH_1066 intracellular sulfur oxidation protein DsrC K23077 dsrC; dissimilatory sulfite reductase related protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CVPH_0077 yggS; conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CVPH_1099 glycosyltransferase, family 25 K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D CVPH_1550 ubiB; ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
D CVPH_1549 conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CVPH_1145 cspA; cold shock protein K03704 cspA; cold shock protein
D CVPH_0205 nitrogen regulatory protein PII K04752 glnK; nitrogen regulatory protein P-II 2
D CVPH_0210 nitrogen regulatory protein PII K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
C 99975 Protein processing
D CVPH_1109 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CVPH_0108 tig; trigger factor K03545 tig; trigger factor
D CVPH_0938 yedZ; sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D CVPH_0330 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CVPH_1024 redox protein regulator OsmC/Ohr family K07397 yhfA; putative redox protein
D CVPH_0374 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D CVPH_0748 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D CVPH_1424 recombination factor protein RarA K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D CVPH_1456 rhodanese domain protein K03972 pspE; phage shock protein E
D CVPH_0775 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CVPH_1309 inorganic phosphate transporter, PiT family K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D CVPH_1122 ispZ; intracellular septation protein K06190 ispZ; intracellular septation protein
C 99993 Cell motility
C 99995 Signaling proteins
D CVPH_0314 typA; GTP-binding protein K06207 typA; GTP-binding protein
D CVPH_0894 phoH; phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CVPH_0780 SH3 domain protein K07184 ygiM; SH3 domain protein
C 99992 Structural proteins
D CVPH_1432 lolA; outer membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D CVPH_0876 conserved hypothetical protein K02494 lolB; outer membrane lipoprotein LolB
D CVPH_1081 vacJ; lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D CVPH_0535 slyB; outer membrane lipoprotein SlyB K06077 slyB; outer membrane lipoprotein SlyB
D CVPH_0889 conserved hypothetical protein K06194 nlpD; lipoprotein NlpD
D CVPH_0475 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D CVPH_0172 conserved hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D CVPH_0595 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D CVPH_0650 apaG; ApaG protein K06195 apaG; ApaG protein
D CVPH_0856 putative iron-regulated protein K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CVPH_1546 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D CVPH_0731 conserved hypothetical protein K07058 K07058; membrane protein
D CVPH_1445 fxsA; conserved hypothetical protein K07113 fxsA; UPF0716 protein FxsA
D CVPH_0896 conserved hypothetical protein K07153 hflD; high frequency lysogenization protein
D CVPH_0351 lemA; LemA protein K03744 lemA; LemA protein
C 99997 Function unknown
D CVPH_0317 conserved hypothetical protein K06888 K06888; uncharacterized protein
D CVPH_0085 baseplate assembly protein GpW K06903 W; Bacteriophage baseplate protein W
D CVPH_1346 phage baseplate assembly protein GpW K06903 W; Bacteriophage baseplate protein W
D CVPH_1123 conserved hypothetical protein K06950 K06950; uncharacterized protein
D CVPH_1174 conserved hypothetical protein K07003 K07003; uncharacterized protein
D CVPH_1290 conserved hypothetical protein K07090 K07090; uncharacterized protein
D CVPH_0766 conserved hypothetical protein K07126 K07126; uncharacterized protein
D CVPH_1272 conserved hypothetical protein K07126 K07126; uncharacterized protein
D CVPH_1506 conserved hypothetical protein K08998 K08998; uncharacterized protein
D CVPH_0113 conserved hypothetical protein K09004 K09004; uncharacterized protein
D CVPH_1225 conserved hypothetical protein K09117 K09117; uncharacterized protein
D CVPH_0657 conserved hypothetical protein K09158 K09158; uncharacterized protein
D CVPH_1271 conserved hypothetical protein K09160 K09160; uncharacterized protein
D CVPH_0224 conserved hypothetical protein K09700 K09700; uncharacterized protein
D CVPH_1013 conserved hypothetical protein K09780 K09780; uncharacterized protein
D CVPH_1037 conserved hypothetical protein K09791 K09791; uncharacterized protein
D CVPH_1187 conserved hypothetical protein K09792 K09792; uncharacterized protein
D CVPH_1189 conserved hypothetical protein K09801 K09801; uncharacterized protein
D CVPH_1473 conserved hypothetical protein K09861 K09861; uncharacterized protein
D CVPH_0336 conserved hypothetical protein K09928 K09928; uncharacterized protein
D CVPH_1310 conserved hypothetical protein K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 1, 2024