+E Transcription factors KO #

  Transcription Factors - Acetobacter pasteurianus IFO 3283-22

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D APA22_40590 araC; transcriptional regulator AraC/YbtA K05372 ybtA; AraC family transcriptional regulator D APA22_40700 araC; transcriptional regulator AraC K07506 K07506; AraC family transcriptional regulator C LysR family D APA22_25320 lysR; transcriptional regulator LysR K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APA22_42280 lysR; transcriptional regulator LysR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D APA22_02040 lysR; transcriptional regulator LysR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D APA22_04210 lysR; transcriptional regulator LysR K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D APA22_20760 lysR; transcriptional regulator LysR K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein C DeoR family D APA22_12580 deoR; transcriptional suppressor DeoR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family C GntR family C TetR/AcrR family D APA22_21710 tetR; transcriptional regulator TetR K09017 rutR; TetR/AcrR family transcriptional regulator D APA22_20520 tetR; transcriptional regulator TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D APA22_40420 tetR; transcriptional regulator TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D APA22_25580 tetR; transcriptional regulator TetR K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor C Lrp/AsnC family C LuxR family D APA22_44200 hypothetical protein K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides C MarR family D APA22_01900 marR; transcriptional regulator MarR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D APA22_22560 marR; transcriptional regulator MarR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D APA22_23800 marR; transcriptional regulator MarR K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D APA22_21970 marR; transcriptional regulator MarR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family C Fur family D APA22_03060 fur; transcriptional regulator Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D APA22_13480 fur; transcriptional regulator Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D APA22_22640 fur; transcriptional regulator Fur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D APA22_16230 iclR; transcriptional regulator IclR family K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor C CRP/FNR family D APA22_25650 aadR_crp_fnr; transcriptional regulator cAMP-binding AadR/Crp/Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D APA22_05530 badM_rrf2; transcriptional regulator BadM/Rrf2 K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D APA22_23570 arsR; transcriptional regulator ArsR K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator C XRE family D APA22_03580 xre; transcriptional regulator Xre K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D APA22_08420 xre; transcriptional regulator Xre K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family C Other families D APA22_40860 mntR; transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D APA22_16300 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D APA22_23920 transcriptional regulator helix turn helix domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D APA22_00460 modE_mopA; transcriptional regulator for molybdenum transport ModE/MopA K02019 modE; molybdate transport system regulatory protein D APA22_43930 xre; transcriptional regulator Xre K07726 K07726; putative transcriptional regulator D APA22_44140 xre; transcriptional regulator Xre K07726 K07726; putative transcriptional regulator D APA22_42310 xre; transcriptional regulator Xre K07726 K07726; putative transcriptional regulator B Ribbon-helix-helix C CopG family D APA22_13960 copG; transcriptional regulator CopG K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator C Other families D APA22_07050 bifunctional (proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D APA22_41260 relEB; translation repressor RelE/RelB/StbE K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D APA22_42790 relEB; translation repressor RelE/RelB/StbE K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB B Other transcription factors C BglG family C Others D APA22_26640 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APA22_40300 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APA22_43400 parB; chromosome partitioning nuclease protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D APA22_10130 carD; transcriptional regulator CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D APA22_00640 hrcA; transcriptional repressor heat-inducible HrcA K03705 hrcA; heat-inducible transcriptional repressor D APA22_02840 transcriptional regulator K07735 algH; putative transcriptional regulator D APA22_25740 traR_dksA; transcriptional regulator TraR/DksA K06204 dksA; RNA polymerase-binding transcription factor D APA22_12530 hypothetical protein K07738 nrdR; transcriptional repressor NrdR D APA22_18900 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024 #
Classification taken and modified from TRANSFAC 7.0