+E Transcription factors KO
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Transcription Factors - Acetobacter pasteurianus IFO 3283-22
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D APA22_40590 araC; transcriptional regulator AraC/YbtA K05372 ybtA; AraC family transcriptional regulator
D APA22_40700 araC; transcriptional regulator AraC K07506 K07506; AraC family transcriptional regulator
C LysR family
D APA22_25320 lysR; transcriptional regulator LysR K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D APA22_42280 lysR; transcriptional regulator LysR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D APA22_02040 lysR; transcriptional regulator LysR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D APA22_04210 lysR; transcriptional regulator LysR K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D APA22_20760 lysR; transcriptional regulator LysR K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
C DeoR family
D APA22_12580 deoR; transcriptional suppressor DeoR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
C LacI family
C GntR family
C TetR/AcrR family
D APA22_21710 tetR; transcriptional regulator TetR K09017 rutR; TetR/AcrR family transcriptional regulator
D APA22_20520 tetR; transcriptional regulator TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D APA22_40420 tetR; transcriptional regulator TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D APA22_25580 tetR; transcriptional regulator TetR K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
C Lrp/AsnC family
C LuxR family
D APA22_44200 hypothetical protein K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
C MarR family
D APA22_01900 marR; transcriptional regulator MarR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D APA22_22560 marR; transcriptional regulator MarR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D APA22_23800 marR; transcriptional regulator MarR K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D APA22_21970 marR; transcriptional regulator MarR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
C Fur family
D APA22_03060 fur; transcriptional regulator Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D APA22_13480 fur; transcriptional regulator Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D APA22_22640 fur; transcriptional regulator Fur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D APA22_16230 iclR; transcriptional regulator IclR family K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor
C CRP/FNR family
D APA22_25650 aadR_crp_fnr; transcriptional regulator cAMP-binding AadR/Crp/Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D APA22_05530 badM_rrf2; transcriptional regulator BadM/Rrf2 K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D APA22_23570 arsR; transcriptional regulator ArsR K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
C XRE family
D APA22_03580 xre; transcriptional regulator Xre K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D APA22_08420 xre; transcriptional regulator Xre K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D APA22_40860 mntR; transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D APA22_16300 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D APA22_23920 transcriptional regulator helix turn helix domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D APA22_00460 modE_mopA; transcriptional regulator for molybdenum transport ModE/MopA K02019 modE; molybdate transport system regulatory protein
D APA22_43930 xre; transcriptional regulator Xre K07726 K07726; putative transcriptional regulator
D APA22_44140 xre; transcriptional regulator Xre K07726 K07726; putative transcriptional regulator
D APA22_42310 xre; transcriptional regulator Xre K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D APA22_13960 copG; transcriptional regulator CopG K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D APA22_07050 bifunctional (proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D APA22_41260 relEB; translation repressor RelE/RelB/StbE K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D APA22_42790 relEB; translation repressor RelE/RelB/StbE K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
C Others
D APA22_26640 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D APA22_40300 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D APA22_43400 parB; chromosome partitioning nuclease protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D APA22_10130 carD; transcriptional regulator CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D APA22_00640 hrcA; transcriptional repressor heat-inducible HrcA K03705 hrcA; heat-inducible transcriptional repressor
D APA22_02840 transcriptional regulator K07735 algH; putative transcriptional regulator
D APA22_25740 traR_dksA; transcriptional regulator TraR/DksA K06204 dksA; RNA polymerase-binding transcription factor
D APA22_12530 hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D APA22_18900 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
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Classification taken and modified from TRANSFAC 7.0