+D GENES KO
#
KEGG Orthology (KO) - Candidatus Absconditicoccus praedator
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis
C 00020 Citrate cycle (TCA cycle)
C 00030 Pentose phosphate pathway
D HLG78_01080 PQQ-dependent sugar dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
C 00040 Pentose and glucuronate interconversions
C 00051 Fructose and mannose metabolism
C 00052 Galactose metabolism
D HLG78_01900 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:aprd00520]
D HLG78_02350 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HLG78_05045 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HLG78_02005 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HLG78_01210 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D HLG78_01900 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
C 00620 Pyruvate metabolism [PATH:aprd00620]
D HLG78_00335 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HLG78_01105 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
C 00630 Glyoxylate and dicarboxylate metabolism
D HLG78_04815 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00640 Propanoate metabolism
C 00650 Butanoate metabolism [PATH:aprd00650]
D HLG78_03310 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:aprd00190]
D HLG78_04705 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HLG78_03710 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HLG78_02475 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HLG78_05185 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HLG78_04685 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HLG78_04695 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HLG78_04690 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HLG78_00095 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle
C 00720 Other carbon fixation pathways [PATH:aprd00720]
D HLG78_02605 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
C 00680 Methane metabolism [PATH:aprd00680]
D HLG78_04815 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00910 Nitrogen metabolism [PATH:aprd00910]
D HLG78_04240 AAA family ATPase K02588 nifH; nitrogenase iron protein NifH
C 00920 Sulfur metabolism
D HLG78_01155 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism
C 00564 Glycerophospholipid metabolism
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:aprd00230]
D HLG78_02145 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HLG78_03725 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HLG78_00575 DUF84 family protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D HLG78_02335 hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HLG78_00920 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HLG78_02300 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HLG78_02305 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HLG78_01100 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HLG78_03745 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HLG78_00030 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D HLG78_00775 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D HLG78_01785 nucleoside monophosphate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HLG78_02100 hypothetical protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:aprd00240]
D HLG78_03280 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HLG78_03725 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HLG78_01100 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HLG78_02490 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D HLG78_02300 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HLG78_02305 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HLG78_02480 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HLG78_02485 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HLG78_00915 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:aprd00250]
D HLG78_03310 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D HLG78_02350 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:aprd00260]
D HLG78_04815 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HLG78_04130 hypothetical protein K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
C 00270 Cysteine and methionine metabolism [PATH:aprd00270]
D HLG78_02145 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HLG78_02195 hypothetical protein K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D HLG78_05110 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00280 Valine, leucine and isoleucine degradation [PATH:aprd00280]
D HLG78_05110 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:aprd00290]
D HLG78_05110 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:aprd00300]
D HLG78_02155 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HLG78_00205 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HLG78_01455 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HLG78_00200 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HLG78_01660 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HLG78_03590 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D HLG78_03310 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis
C 00330 Arginine and proline metabolism [PATH:aprd00330]
D HLG78_04130 hypothetical protein K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D HLG78_00600 hypothetical protein K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D HLG78_03310 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:aprd00400]
D HLG78_01530 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HLG78_02575 hypothetical protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:aprd00450]
D HLG78_04970 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HLG78_04435 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HLG78_02815 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D HLG78_04815 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:aprd00470]
D HLG78_00370 hypothetical protein K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HLG78_00200 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:aprd00480]
D HLG78_03390 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HLG78_01515 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:aprd00542]
D HLG78_03615 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:aprd00541]
D HLG78_01900 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HLG78_01210 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:aprd00550]
D HLG78_05045 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HLG78_02005 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HLG78_03020 hypothetical protein K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HLG78_00370 hypothetical protein K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HLG78_01660 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HLG78_03590 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HLG78_05160 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HLG78_05130 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HLG78_01725 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HLG78_01990 glycosyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HLG78_05270 penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
C 00552 Teichoic acid biosynthesis [PATH:aprd00552]
D HLG78_05130 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HLG78_03615 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:aprd00543]
D HLG78_03615 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HLG78_00805 WecB/TagA/CpsF family glycosyltransferase K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:aprd00730]
D HLG78_05240 hypothetical protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HLG78_01785 nucleoside monophosphate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:aprd00760]
D HLG78_03310 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis
D HLG78_05110 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:aprd00790]
D HLG78_04820 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HLG78_02425 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D HLG78_04155 radical SAM protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HLG78_04215 radical SAM protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
C 00670 One carbon pool by folate [PATH:aprd00670]
D HLG78_04820 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HLG78_02605 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HLG78_04815 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HLG78_02550 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HLG78_00915 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:aprd00860]
D HLG78_01705 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HLG78_04145 radical SAM protein K22226 ahbC; Fe-coproporphyrin III synthase
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis
D HLG78_05160 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
D HLG78_00600 hypothetical protein K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
C 00261 Monobactam biosynthesis
D HLG78_02155 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D HLG78_04240 AAA family ATPase K02588 nifH; nitrogenase iron protein NifH
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:aprd03020]
D HLG78_00045 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HLG78_00040 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HLG78_01805 hypothetical protein K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:aprd03010]
D HLG78_03360 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D HLG78_00080 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HLG78_01360 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HLG78_01810 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HLG78_01305 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HLG78_00065 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HLG78_03655 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HLG78_01320 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HLG78_01790 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HLG78_01395 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HLG78_01815 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HLG78_03660 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HLG78_01820 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HLG78_01325 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HLG78_03365 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HLG78_03060 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HLG78_01345 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HLG78_00055 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HLG78_01370 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HLG78_01585 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HLG78_03900 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HLG78_01375 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HLG78_01390 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HLG78_01385 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HLG78_01330 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HLG78_01315 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HLG78_00085 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HLG78_02645 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HLG78_00090 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HLG78_03895 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HLG78_01795 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HLG78_01340 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HLG78_01300 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HLG78_01355 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HLG78_01800 hypothetical protein K02879 RP-L17; large subunit ribosomal protein L17
D HLG78_01310 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HLG78_03640 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HLG78_01850 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HLG78_01835 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HLG78_01365 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HLG78_01380 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HLG78_01335 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HLG78_03635 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HLG78_01500 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HLG78_03630 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HLG78_01350 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HLG78_03720 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HLG78_01495 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HLG78_03065 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HLG78_00050 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HLG78_01855 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HLG78_01825 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:aprd00970]
D HLG78_01875 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HLG78_01870 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HLG78_01590 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HLG78_01575 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HLG78_02035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HLG78_01555 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HLG78_04710 tRNA-His K14226 tRNA-His; tRNA His
D HLG78_01405 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HLG78_01560 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HLG78_01605 tRNA-Met K14230 tRNA-Met; tRNA Met
D HLG78_01415 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HLG78_02980 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HLG78_04260 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HLG78_01705 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HLG78_00630 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HLG78_00785 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HLG78_03040 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HLG78_04855 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HLG78_02170 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HLG78_03260 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HLG78_00820 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HLG78_00480 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HLG78_04745 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HLG78_01905 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HLG78_02815 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HLG78_02550 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HLG78_05065 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HLG78_02165 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HLG78_02020 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HLG78_03820 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HLG78_03480 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HLG78_05105 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HLG78_04425 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HLG78_05190 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HLG78_00595 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HLG78_01995 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HLG78_04050 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:aprd03060]
D HLG78_01295 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HLG78_03880 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HLG78_04960 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HLG78_01480 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HLG78_04040 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D HLG78_03705 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HLG78_02580 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HLG78_01635 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:aprd04122]
D HLG78_02310 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HLG78_04155 radical SAM protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HLG78_04215 radical SAM protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HLG78_05240 hypothetical protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:aprd03018]
D HLG78_04530 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HLG78_03805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HLG78_02505 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HLG78_03680 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HLG78_03605 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HLG78_04560 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:aprd03030]
D HLG78_05255 3'-5' exoribonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HLG78_04330 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HLG78_01290 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HLG78_04585 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HLG78_00230 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HLG78_05165 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HLG78_05120 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HLG78_02515 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HLG78_00060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_01640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_03565 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HLG78_02990 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HLG78_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:aprd03410]
D HLG78_02595 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HLG78_03305 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HLG78_02135 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D HLG78_02810 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HLG78_03420 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HLG78_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:aprd03420]
D HLG78_02610 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D HLG78_03010 DEAD/DEAH box helicase family protein K03702 uvrB; excinuclease ABC subunit B
D HLG78_00465 GIY-YIG nuclease family protein K03703 uvrC; excinuclease ABC subunit C
D HLG78_05275 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HLG78_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:aprd03430]
D HLG78_00280 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HLG78_00345 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D HLG78_05275 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HLG78_03420 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HLG78_00060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_01640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_04330 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HLG78_05165 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HLG78_01290 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HLG78_00230 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HLG78_04585 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HLG78_05255 3'-5' exoribonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HLG78_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:aprd03440]
D HLG78_03420 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HLG78_00060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_01640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_02910 recA; recombinase RecA K03553 recA; recombination protein RecA
D HLG78_04410 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA
D HLG78_00160 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HLG78_00835 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HLG78_02845 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HLG78_04330 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HLG78_05165 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HLG78_01290 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HLG78_00230 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HLG78_04585 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HLG78_05255 3'-5' exoribonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:aprd02010]
D HLG78_03910 hypothetical protein K09811 ftsX; cell division transport system permease protein
D HLG78_02520 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:aprd03070]
D HLG78_01445 type II secretion system protein K02456 gspG; general secretion pathway protein G
D HLG78_04305 type II secretion system protein K02458 gspI; general secretion pathway protein I
D HLG78_02410 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HLG78_02855 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HLG78_04040 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D HLG78_01480 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HLG78_03880 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HLG78_04960 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HLG78_01295 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HLG78_03705 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HLG78_02580 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:aprd02020]
D HLG78_04940 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HLG78_02745 response regulator transcription factor K18344 vanRB; two-component system, OmpR family, response regulator VanR
D HLG78_01105 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HLG78_04310 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:aprd02024]
D HLG78_01530 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HLG78_04955 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HLG78_03705 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HLG78_04040 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D HLG78_03880 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HLG78_04960 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HLG78_01295 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HLG78_02580 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D HLG78_05100 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
C 01502 Vancomycin resistance [PATH:aprd01502]
D HLG78_02745 response regulator transcription factor K18344 vanRB; two-component system, OmpR family, response regulator VanR
D HLG78_03590 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HLG78_01725 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HLG78_01990 glycosyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:aprd01000]
C 01001 Protein kinases [BR:aprd01001]
C 01009 Protein phosphatases and associated proteins
C 01002 Peptidases and inhibitors [BR:aprd01002]
D HLG78_03405 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HLG78_02350 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HLG78_02820 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D HLG78_02380 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D HLG78_03325 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D HLG78_03390 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HLG78_00205 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HLG78_01455 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HLG78_02770 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HLG78_00890 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D HLG78_05005 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HLG78_00495 M48 family metallopeptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HLG78_02565 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HLG78_02900 M48 family metallopeptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HLG78_01715 site-2 protease family protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HLG78_03570 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D HLG78_05250 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D HLG78_02890 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HLG78_00570 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D HLG78_01635 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HLG78_04925 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HLG78_00395 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21]
D HLG78_04905 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21]
D HLG78_00185 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HLG78_04450 S-layer homology domain-containing protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:aprd01003]
D HLG78_03615 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HLG78_00805 WecB/TagA/CpsF family glycosyltransferase K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:aprd01005]
D HLG78_03615 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:aprd01011]
D HLG78_05045 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HLG78_02005 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HLG78_03020 hypothetical protein K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HLG78_00370 hypothetical protein K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HLG78_01660 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HLG78_01725 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HLG78_01990 glycosyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HLG78_05130 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HLG78_05270 penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D HLG78_03675 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins
C 01008 Polyketide biosynthesis proteins [BR:aprd01008]
C 01006 Prenyltransferases [BR:aprd01006]
D HLG78_05160 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HLG78_04785 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:aprd01007]
D HLG78_01705 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HLG78_01995 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HLG78_04050 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HLG78_01905 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HLG78_03480 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HLG78_02815 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HLG78_02020 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HLG78_05065 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HLG78_02165 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HLG78_03820 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HLG78_02170 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HLG78_03260 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HLG78_04425 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HLG78_00820 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HLG78_04745 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HLG78_05105 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HLG78_00480 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HLG78_04855 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HLG78_05190 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HLG78_00595 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HLG78_00830 pyridoxal phosphate-dependent aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D HLG78_05110 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:aprd00194]
D HLG78_05185 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HLG78_03710 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HLG78_02475 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HLG78_04705 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HLG78_04695 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HLG78_04690 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HLG78_04685 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:aprd03000]
D HLG78_00155 hypothetical protein K03705 hrcA; heat-inducible transcriptional repressor
D HLG78_02720 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:aprd03021]
D HLG78_01805 hypothetical protein K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HLG78_00045 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HLG78_00040 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HLG78_05100 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D HLG78_00780 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HLG78_01490 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D HLG78_03885 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HLG78_04825 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:aprd03019]
D HLG78_01485 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HLG78_03680 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HLG78_02505 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HLG78_03805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HLG78_04530 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HLG78_03605 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HLG78_04560 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
C 03041 Spliceosome
C 03011 Ribosome [BR:aprd03011]
D HLG78_03360 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D HLG78_00080 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HLG78_01360 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HLG78_01810 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HLG78_01305 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HLG78_00065 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HLG78_03655 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HLG78_01320 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HLG78_01790 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HLG78_01395 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HLG78_01815 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HLG78_03660 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HLG78_01820 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HLG78_01325 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HLG78_03365 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HLG78_03060 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HLG78_01345 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HLG78_00055 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HLG78_01370 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HLG78_01585 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HLG78_03900 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HLG78_01375 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HLG78_01390 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HLG78_01385 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HLG78_01330 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HLG78_01315 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HLG78_02645 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HLG78_00090 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HLG78_03895 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HLG78_00085 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HLG78_01795 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HLG78_01340 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HLG78_01300 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HLG78_01355 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HLG78_01800 hypothetical protein K02879 RP-L17; large subunit ribosomal protein L17
D HLG78_01310 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HLG78_03640 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HLG78_01850 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HLG78_01835 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HLG78_01365 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HLG78_01380 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HLG78_01335 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HLG78_01500 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HLG78_03630 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HLG78_01350 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HLG78_03720 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HLG78_01495 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HLG78_03065 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HLG78_00050 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HLG78_01855 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HLG78_01825 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HLG78_03635 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:aprd03009]
D HLG78_01485 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HLG78_00260 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D HLG78_00780 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HLG78_01490 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D HLG78_03885 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HLG78_02715 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HLG78_01960 hypothetical protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HLG78_00320 RsmE family RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HLG78_02875 NOL1/NOP2/sun family putative RNA methylase K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D HLG78_03345 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HLG78_03175 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HLG78_01970 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HLG78_02710 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D HLG78_05115 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HLG78_04935 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HLG78_04880 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D HLG78_03755 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HLG78_02840 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HLG78_03805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HLG78_04985 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D HLG78_02230 hflX; GTPase HflX K03665 hflX; GTPase
D HLG78_02790 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HLG78_03745 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HLG78_04865 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:aprd03016]
D HLG78_00760 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D HLG78_01705 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HLG78_05105 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HLG78_02020 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HLG78_02165 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HLG78_02815 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HLG78_03480 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HLG78_03820 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HLG78_02170 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HLG78_04855 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HLG78_03260 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HLG78_00820 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HLG78_00480 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HLG78_04745 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HLG78_01905 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HLG78_05065 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HLG78_04425 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HLG78_05190 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HLG78_00595 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HLG78_01995 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HLG78_04050 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HLG78_02325 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HLG78_02650 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HLG78_02375 methyltransferase K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229]
D HLG78_01070 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HLG78_03510 hypothetical protein K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HLG78_02540 GNAT family N-acetyltransferase K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D HLG78_02790 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HLG78_04785 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HLG78_01155 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HLG78_04590 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HLG78_03275 MiaB/RimO family radical SAM methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HLG78_05090 radical SAM protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D HLG78_02530 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HLG78_02310 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HLG78_02095 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HLG78_00375 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HLG78_05240 hypothetical protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HLG78_00130 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HLG78_03375 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HLG78_04530 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:aprd03012]
D HLG78_04535 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HLG78_01860 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HLG78_00070 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HLG78_01400 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HLG78_03045 fusA; elongation factor G K02355 fusA; elongation factor G
D HLG78_04945 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HLG78_02995 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HLG78_03865 HemK family protein methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HLG78_04540 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HLG78_01830 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HLG78_02920 efp; elongation factor P K02356 efp; elongation factor P
C 03110 Chaperones and folding catalysts [BR:aprd03110]
D HLG78_03300 AAA family ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HLG78_00460 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HLG78_02620 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HLG78_03605 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HLG78_04560 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HLG78_00235 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HLG78_02570 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D HLG78_01615 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D HLG78_04555 co-chaperone GroES K04078 groES; chaperonin GroES
D HLG78_05005 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HLG78_04685 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HLG78_00670 trxA; thioredoxin K03671 TXN; thioredoxin
D HLG78_02665 thioredoxin family protein K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:aprd04131]
D HLG78_03725 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:aprd03032]
D HLG78_03565 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HLG78_01665 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D HLG78_04940 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HLG78_05120 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HLG78_02515 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HLG78_00060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_01640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_04330 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HLG78_05165 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HLG78_00230 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HLG78_04585 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HLG78_05255 3'-5' exoribonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HLG78_01290 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HLG78_02990 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HLG78_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HLG78_00365 DNA topoisomerase 4 subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HLG78_03330 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HLG78_00585 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:aprd03036]
D HLG78_01485 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HLG78_04835 hypothetical protein K03746 hns; DNA-binding protein H-NS
D HLG78_01665 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D HLG78_04940 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HLG78_05175 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HLG78_02520 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D HLG78_03350 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HLG78_00610 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D HLG78_03910 hypothetical protein K09811 ftsX; cell division transport system permease protein
D HLG78_05180 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HLG78_03345 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HLG78_00470 site-specific integrase K04763 xerD; integrase/recombinase XerD
D HLG78_01160 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
C 03400 DNA repair and recombination proteins [BR:aprd03400]
D HLG78_02150 MGMT family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HLG78_02050 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D HLG78_03305 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HLG78_02135 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D HLG78_02595 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HLG78_00240 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HLG78_02485 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HLG78_02210 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D HLG78_02810 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HLG78_03420 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HLG78_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HLG78_02610 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D HLG78_03010 DEAD/DEAH box helicase family protein K03702 uvrB; excinuclease ABC subunit B
D HLG78_00465 GIY-YIG nuclease family protein K03703 uvrC; excinuclease ABC subunit C
D HLG78_05275 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HLG78_00045 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HLG78_00040 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HLG78_01805 hypothetical protein K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HLG78_00280 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HLG78_00345 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D HLG78_04330 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HLG78_05165 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HLG78_00230 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HLG78_04585 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HLG78_05255 3'-5' exoribonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HLG78_01290 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HLG78_00060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_01640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_02910 recA; recombinase RecA K03553 recA; recombination protein RecA
D HLG78_04410 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA
D HLG78_00160 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HLG78_00835 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HLG78_03610 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D HLG78_02255 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HLG78_02845 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HLG78_00695 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HLG78_00880 cas1b; type I-B CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HLG78_00365 DNA topoisomerase 4 subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HLG78_03330 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HLG78_00585 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HLG78_01665 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D HLG78_04835 hypothetical protein K03746 hns; DNA-binding protein H-NS
D HLG78_00565 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HLG78_00570 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D HLG78_00895 regulatory protein RecX K03565 recX; regulatory protein
D HLG78_02870 RecX family transcriptional regulator K03565 recX; regulatory protein
D HLG78_02300 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HLG78_02305 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:aprd03029]
D HLG78_04535 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HLG78_01860 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HLG78_00070 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HLG78_01400 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HLG78_03045 fusA; elongation factor G K02355 fusA; elongation factor G
D HLG78_01995 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HLG78_02165 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HLG78_02170 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HLG78_00820 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HLG78_03480 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HLG78_00630 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HLG78_00785 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HLG78_03040 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HLG78_00060 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_01640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HLG78_03605 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HLG78_02570 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D HLG78_04560 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HLG78_04555 co-chaperone GroES K04078 groES; chaperonin GroES
D HLG78_00235 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HLG78_03705 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:aprd02000]
D HLG78_02275 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HLG78_04955 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HLG78_03910 hypothetical protein K09811 ftsX; cell division transport system permease protein
D HLG78_02520 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D HLG78_04495 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HLG78_03085 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HLG78_04490 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HLG78_01050 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HLG78_03560 ATP-binding cassette domain-containing protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D HLG78_01515 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HLG78_03525 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D HLG78_05060 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D HLG78_01630 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HLG78_02080 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump
D HLG78_04875 C4-dicarboxylate ABC transporter K03304 tehA; tellurite resistance protein
D HLG78_00620 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D HLG78_00610 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
C 02044 Secretion system [BR:aprd02044]
D HLG78_02410 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HLG78_02855 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D HLG78_01445 type II secretion system protein K02456 gspG; general secretion pathway protein G
D HLG78_04305 type II secretion system protein K02458 gspI; general secretion pathway protein I
D HLG78_03405 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HLG78_04310 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D HLG78_02850 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D HLG78_01435 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D HLG78_00120 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D HLG78_05025 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D HLG78_03740 prepilin-type N-terminal cleavage/methylation domain-containing protein K02671 pilV; type IV pilus assembly protein PilV
D HLG78_04360 tadA; Flp pilus assembly complex ATPase component TadA K10965 tcpT; toxin coregulated pilus biosynthesis protein T
D HLG78_04295 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG
D HLG78_01940 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D HLG78_02580 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HLG78_04040 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D HLG78_03880 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HLG78_01480 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D HLG78_04960 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HLG78_01295 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HLG78_03705 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:aprd02042]
D HLG78_01630 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:aprd02022]
D HLG78_02745 response regulator transcription factor K18344 vanRB; two-component system, OmpR family, response regulator VanR
C 02035 Bacterial motility proteins [BR:aprd02035]
D HLG78_00120 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D HLG78_05025 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D HLG78_04310 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D HLG78_02850 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D HLG78_03405 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HLG78_03740 prepilin-type N-terminal cleavage/methylation domain-containing protein K02671 pilV; type IV pilus assembly protein PilV
D HLG78_01435 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:aprd04812]
D HLG78_04605 amrB; AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein
D HLG78_05180 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HLG78_05175 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
C 04147 Exosome [BR:aprd04147]
D HLG78_04560 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HLG78_03605 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HLG78_01400 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HLG78_02650 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HLG78_01785 nucleoside monophosphate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HLG78_02425 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
C 02048 Prokaryotic defense system [BR:aprd02048]
D HLG78_00695 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HLG78_00880 cas1b; type I-B CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HLG78_00700 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D HLG78_00885 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D HLG78_04010 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D HLG78_00870 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D HLG78_00875 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D HLG78_00840 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D HLG78_00845 hypothetical protein K19114 csh1; CRISPR-associated protein Csh1
D HLG78_00860 cas7b; type I-B CRISPR-associated protein Cas7/Csh2 K19115 csh2; CRISPR-associated protein Csh2
D HLG78_00865 cas5b; type I-B CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h
D HLG78_03965 cas10; type III-A CRISPR-associated protein Cas10/Csm1 K07016 csm1; CRISPR-associated protein Csm1
D HLG78_03970 csm2; type III-A CRISPR-associated protein Csm2 K19138 csm2; CRISPR-associated protein Csm2
D HLG78_03975 csm3; type III-A CRISPR-associated RAMP protein Csm3 K09002 csm3; CRISPR-associated protein Csm3
D HLG78_03955 hypothetical protein K19140 csm5; CRISPR-associated protein Csm5
D HLG78_00500 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HLG78_04625 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HLG78_00515 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HLG78_04645 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HLG78_00530 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HLG78_04655 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HLG78_05180 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HLG78_01705 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:aprd01504]
D HLG78_02745 response regulator transcription factor K18344 vanRB; two-component system, OmpR family, response regulator VanR
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:aprd00536]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:aprd00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:aprd03100]
D HLG78_01875 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HLG78_01870 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HLG78_01590 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HLG78_01575 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HLG78_02035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HLG78_01555 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HLG78_04710 tRNA-His K14226 tRNA-His; tRNA His
D HLG78_01405 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HLG78_01560 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HLG78_01605 tRNA-Met K14230 tRNA-Met; tRNA Met
D HLG78_01415 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HLG78_02980 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HLG78_04260 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HLG78_00650 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D HLG78_05145 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D HLG78_01090 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HLG78_02220 hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D HLG78_04090 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HLG78_02700 alpha/beta hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D HLG78_01710 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HLG78_02985 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HLG78_02510 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D HLG78_00940 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HLG78_02045 N-glycosylase/DNA lyase K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D HLG78_03730 ferredoxin K05337 fer; ferredoxin
D HLG78_02465 iron-sulfur cluster assembly scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D HLG78_03535 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
D HLG78_01895 DUF2304 family protein K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HLG78_02775 cold shock domain-containing protein K03704 cspA; cold shock protein
D HLG78_04740 S1 RNA-binding domain-containing protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D HLG78_05000 hypothetical protein K03545 tig; trigger factor
D HLG78_02430 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D HLG78_00190 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D HLG78_04920 YraN family protein K07460 yraN; putative endonuclease
D HLG78_03980 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D HLG78_01525 PD-(D/E)XK nuclease family protein K07465 K07465; putative RecB family exonuclease
D HLG78_03295 DNA-protecting protein DprA K04096 smf; DNA processing protein
D HLG78_02190 IS1595 family transposase K07488 K07488; transposase
D HLG78_03190 IS1595 family transposase K07488 K07488; transposase
D HLG78_03950 IS1595 family transposase K07488 K07488; transposase
D HLG78_04015 IS1595 family transposase K07488 K07488; transposase
D HLG78_01930 transposase K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D HLG78_04995 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
D HLG78_02180 hypothetical protein K07321 cooC; CO dehydrogenase maturation factor
C 99993 Cell motility
C 99995 Signaling proteins
D HLG78_01520 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D HLG78_02705 signal peptidase II K07176 K07176; putative serine/threonine protein kinase
C 99992 Structural proteins
C 99994 Others
D HLG78_00680 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HLG78_00945 tadA; Flp pilus assembly complex ATPase component TadA K06865 K06865; ATPase
D HLG78_02615 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D HLG78_03555 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D HLG78_00270 LemA family protein K03744 lemA; LemA protein
D HLG78_02895 LemA family protein K03744 lemA; LemA protein
D HLG78_05140 DedA family protein K03975 dedA; membrane-associated protein
D HLG78_05070 phage holin family protein K08972 K08972; putative membrane protein
D HLG78_04065 DUF368 domain-containing protein K08974 K08974; putative membrane protein
C 99997 Function unknown
D HLG78_03005 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D HLG78_05325 ATP-binding protein K06926 K06926; uncharacterized protein
D HLG78_02200 HD domain-containing protein K06950 K06950; uncharacterized protein
D HLG78_04265 HD domain-containing protein K06950 K06950; uncharacterized protein
D HLG78_00250 MBL fold metallo-hydrolase K07041 K07041; uncharacterized protein
D HLG78_01110 DUF4143 domain-containing protein K07133 K07133; uncharacterized protein
D HLG78_01190 AAA family ATPase K07133 K07133; uncharacterized protein
D HLG78_01255 ATP-binding protein K07133 K07133; uncharacterized protein
D HLG78_01265 ATP-binding protein K07133 K07133; uncharacterized protein
D HLG78_00800 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D HLG78_03700 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D HLG78_04470 DUF2075 domain-containing protein K09384 K09384; uncharacterized protein
D HLG78_02780 DUF342 domain-containing protein K09749 K09749; uncharacterized protein
D HLG78_03925 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D HLG78_04810 divergent PAP2 family protein K09775 K09775; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024