+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Acetobacter pasteurianus IFO 3283-01

% ! ACRISPR-Cas system B Universal Cas proteins C APA01_41090 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C APA01_41100 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D APA01_41030 cas3; CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors D APA01_41040 hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA D APA01_41050 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB D APA01_41060 CRISPR-associated protein Cse4 K19124 casC; CRISPR system Cascade subunit CasC D APA01_41070 CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD D APA01_41080 CRISPR-associated protein Cse3 K19126 casE; CRISPR system Cascade subunit CasE C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C APA01_42380 type I/III endonuclease restriction R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C APA01_43180 type I/III endonuclease restriction R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C APA01_14260 type I/III endonuclease/restriction R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C APA01_14280 type I endonuclease/restriction R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C APA01_43200 type I DNA specificity S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C APA01_42390 type I DNA specificity S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C APA01_14250 type I DNA specificity S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C APA01_41860 type I DNA specificity S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C APA01_41890 hsdM; type I DNA methyltransferase M subunit HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C APA01_42400 hsdM; type I DNA methyltransferase M subunit HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C APA01_43210 hsdM; type I DNA methyltransferase M subunit HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D APA01_09690 DNA methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D APA01_08020 DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] B Type III R-M system B Type IV R-M system C APA01_20180 endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] C APA01_04750 endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D APA01_41490 endoribonuclease K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D APA01_41500 abrB; transcriptional regulator AbrB K07172 mazE; antitoxin MazE C ChpB-ChpS C YhaV-PrlF D APA01_40790 hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-] D APA01_40780 abrB; transcriptional regulator AbrB K19156 prlF; antitoxin PrlF C RelE/StbE-RelB/StbD D APA01_41270 relEB; translation repressor RelE/RelB/StbE K06218 relE; mRNA interferase RelE/StbE D APA01_42800 relEB; translation repressor RelE/RelB/StbE K06218 relE; mRNA interferase RelE/StbE D APA01_41260 relEB; translation repressor RelE/RelB/StbE K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D APA01_42790 relEB; translation repressor RelE/RelB/StbE K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB C YafQ-dinJ C YoeB-YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA D APA01_43310 ccdB; CcdB-like toxin protein K19163 ccdB; toxin CcdB D APA01_43300 hypothetical protein K19164 ccdA; antitoxin CcdA C ParE-ParD C Doc-Phd D APA01_43770 death-on-curing protein K07341 doc; death on curing protein C HigB-HigA D APA01_23920 transcriptional regulator helix turn helix domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA C MqsR-MqsA C VapC-VapB D APA01_41510 ntrR; transcriptional regulator NtrR/PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D APA01_43270 ntrR; transcriptional regulator NtrR/PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D APA01_42550 ntrR; transcriptional regulator NtrR/PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D APA01_41520 ntrP; nitrogen regulatory protein NtrP K18829 mvpT; antitoxin VapB D APA01_43260 plasmid maintenance protein K18829 mvpT; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D APA01_43880 plasmid stabilization protein K07062 fitB; toxin FitB [EC:3.1.-.-] D APA01_43870 plasmid stabilization protein K21495 fitA; antitoxin FitA C BC_0920-BC_0921 C Type II TA system related factors D APA01_19050 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D APA01_00760 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D APA01_19400 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D APA01_07440 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D APA01_07620 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APA01_19180 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D APA01_11050 hypothetical protein K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C APA01_26010 nifS; cysteine desulfurase II NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C APA01_26020 nifS; cysteine desulfurase I NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023