+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Acetobacter pasteurianus IFO 3283-01
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ACRISPR-Cas system
B Universal Cas proteins
C APA01_41090 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C APA01_41100 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D APA01_41030 cas3; CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
D APA01_41040 hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA
D APA01_41050 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB
D APA01_41060 CRISPR-associated protein Cse4 K19124 casC; CRISPR system Cascade subunit CasC
D APA01_41070 CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD
D APA01_41080 CRISPR-associated protein Cse3 K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C APA01_42380 type I/III endonuclease restriction R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C APA01_43180 type I/III endonuclease restriction R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C APA01_14260 type I/III endonuclease/restriction R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C APA01_14280 type I endonuclease/restriction R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C APA01_43200 type I DNA specificity S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C APA01_42390 type I DNA specificity S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C APA01_14250 type I DNA specificity S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C APA01_41860 type I DNA specificity S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C APA01_41890 hsdM; type I DNA methyltransferase M subunit HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C APA01_42400 hsdM; type I DNA methyltransferase M subunit HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C APA01_43210 hsdM; type I DNA methyltransferase M subunit HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D APA01_09690 DNA methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D APA01_08020 DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
B Type III R-M system
B Type IV R-M system
C APA01_20180 endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
C APA01_04750 endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D APA01_41490 endoribonuclease K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D APA01_41500 abrB; transcriptional regulator AbrB K07172 mazE; antitoxin MazE
C ChpB-ChpS
C YhaV-PrlF
D APA01_40790 hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D APA01_40780 abrB; transcriptional regulator AbrB K19156 prlF; antitoxin PrlF
C RelE/StbE-RelB/StbD
D APA01_41270 relEB; translation repressor RelE/RelB/StbE K06218 relE; mRNA interferase RelE/StbE
D APA01_42800 relEB; translation repressor RelE/RelB/StbE K06218 relE; mRNA interferase RelE/StbE
D APA01_41260 relEB; translation repressor RelE/RelB/StbE K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D APA01_42790 relEB; translation repressor RelE/RelB/StbE K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
D APA01_43310 ccdB; CcdB-like toxin protein K19163 ccdB; toxin CcdB
D APA01_43300 hypothetical protein K19164 ccdA; antitoxin CcdA
C ParE-ParD
C Doc-Phd
D APA01_43770 death-on-curing protein K07341 doc; death on curing protein
C HigB-HigA
D APA01_23920 transcriptional regulator helix turn helix domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
C MqsR-MqsA
C VapC-VapB
D APA01_41510 ntrR; transcriptional regulator NtrR/PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D APA01_43270 ntrR; transcriptional regulator NtrR/PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D APA01_42550 ntrR; transcriptional regulator NtrR/PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D APA01_41520 ntrP; nitrogen regulatory protein NtrP K18829 mvpT; antitoxin VapB
D APA01_43260 plasmid maintenance protein K18829 mvpT; antitoxin VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
D APA01_43880 plasmid stabilization protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D APA01_43870 plasmid stabilization protein K21495 fitA; antitoxin FitA
C BC_0920-BC_0921
C Type II TA system related factors
D APA01_19050 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D APA01_00760 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D APA01_19400 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D APA01_07440 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D APA01_07620 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APA01_19180 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D APA01_11050 hypothetical protein K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C APA01_26010 nifS; cysteine desulfurase II NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C APA01_26020 nifS; cysteine desulfurase I NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023