+D GENES KO #

  KEGG Orthology (KO) - Alistipes putredinis

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:aput00010] D L6V35_07440 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D L6V35_08680 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D L6V35_03785 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D L6V35_04235 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_07330 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D L6V35_05320 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:aput00020] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D L6V35_08570 4Fe-4S dicluster domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D L6V35_05105 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D L6V35_05320 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00030 Pentose phosphate pathway [PATH:aput00030] D L6V35_08700 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D L6V35_07440 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] C 00040 Pentose and glucuronate interconversions D L6V35_00830 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00051 Fructose and mannose metabolism [PATH:aput00051] D L6V35_07290 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D L6V35_06005 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D L6V35_07440 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D L6V35_08680 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D L6V35_08700 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:aput00052] D L6V35_07330 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D L6V35_01380 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D L6V35_08540 glycoside hydrolase family 97 catalytic domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:aput00053] D L6V35_00830 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:aput00500] D L6V35_08540 glycoside hydrolase family 97 catalytic domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D L6V35_00800 alpha amylase C-terminal domain-containing protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:aput00520] D L6V35_08515 PIG-L family deacetylase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D L6V35_08520 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D L6V35_09090 GDP-mannose 4,6-dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D L6V35_00830 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D L6V35_07290 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D L6V35_06005 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:aput00620] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D L6V35_03385 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_04820 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D L6V35_05320 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:aput00630] D L6V35_02035 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D L6V35_00230 acyl-CoA mutase large subunit family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D L6V35_08590 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D L6V35_01805 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:aput00640] D L6V35_03385 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D L6V35_02035 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D L6V35_00230 acyl-CoA mutase large subunit family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D L6V35_10295 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:aput00650] D L6V35_02050 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D L6V35_05105 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D L6V35_09475 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D L6V35_09470 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism D L6V35_09475 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D L6V35_09470 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00562 Inositol phosphate metabolism D L6V35_08680 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:aput00190] D L6V35_05105 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D L6V35_02895 ATPase K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:aput00710] D L6V35_04235 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D L6V35_03785 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D L6V35_07440 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D L6V35_08700 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D L6V35_08680 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D L6V35_05320 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00720 Other carbon fixation pathways [PATH:aput00720] D L6V35_05105 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D L6V35_08570 4Fe-4S dicluster domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D L6V35_02035 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D L6V35_00230 acyl-CoA mutase large subunit family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D L6V35_00760 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D L6V35_03385 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:aput00680] D L6V35_01805 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D L6V35_07440 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D L6V35_06375 4Fe-4S dicluster domain-containing protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D L6V35_03385 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D L6V35_07120 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:aput00910] D L6V35_01740 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D L6V35_09845 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D L6V35_08325 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:aput00920] D L6V35_00025 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D L6V35_06830 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:aput00061] D L6V35_01810 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D L6V35_05980 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:aput00071] D L6V35_05980 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:aput00561] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_02950 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D L6V35_09115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:aput00564] D L6V35_09115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D L6V35_00630 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D L6V35_06905 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D L6V35_06000 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D L6V35_06910 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D L6V35_03890 PLDc N-terminal domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D L6V35_09655 iron-containing alcohol dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D L6V35_00625 sn-glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D L6V35_01380 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:aput00230] D L6V35_03130 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D L6V35_06865 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D L6V35_10055 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D L6V35_00030 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D L6V35_03465 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D L6V35_02395 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D L6V35_08600 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D L6V35_02990 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D L6V35_07875 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D L6V35_06560 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:aput00240] D L6V35_09980 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D L6V35_04610 dihydroorotate dehydrogenase-like protein K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D L6V35_07205 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D L6V35_06035 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D L6V35_04330 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D L6V35_04845 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D L6V35_03365 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D L6V35_02200 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D L6V35_05195 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D L6V35_10055 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D L6V35_00030 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D L6V35_03880 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D L6V35_04795 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D L6V35_08600 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D L6V35_02395 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D L6V35_07875 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D L6V35_03735 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D L6V35_02715 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D L6V35_06395 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:aput00250] D L6V35_05220 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D L6V35_06065 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D L6V35_02990 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D L6V35_06865 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D L6V35_09980 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D L6V35_08325 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D L6V35_01740 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D L6V35_09845 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] C 00260 Glycine, serine and threonine metabolism [PATH:aput00260] D L6V35_04625 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D L6V35_01745 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D L6V35_01805 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D L6V35_07120 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D L6V35_06000 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D L6V35_03395 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D L6V35_07105 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D L6V35_07075 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:aput00270] D L6V35_06830 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D L6V35_01735 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D L6V35_02445 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D L6V35_04625 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D L6V35_01745 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D L6V35_04295 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D L6V35_02825 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D L6V35_03395 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D L6V35_07120 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:aput00280] D L6V35_02825 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D L6V35_02035 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D L6V35_00230 acyl-CoA mutase large subunit family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:aput00290] D L6V35_09475 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D L6V35_09470 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D L6V35_02825 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:aput00300] D L6V35_04625 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D L6V35_01745 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D L6V35_02335 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D L6V35_03300 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D L6V35_05825 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D L6V35_03805 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D L6V35_05055 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] C 00310 Lysine degradation [PATH:aput00310] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D L6V35_02085 hypothetical protein K00824 dat; D-alanine transaminase [EC:2.6.1.21] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:aput00220] D L6V35_06560 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D L6V35_01740 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D L6V35_09845 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D L6V35_06510 M20 family metallo-hydrolase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:aput00330] D L6V35_08995 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09095 hypothetical protein K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D L6V35_04425 NAD(P)-binding domain-containing protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D L6V35_02085 hypothetical protein K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:aput00340] D L6V35_01450 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism C 00360 Phenylalanine metabolism D L6V35_02085 hypothetical protein K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00380 Tryptophan metabolism [PATH:aput00380] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:aput00400] D L6V35_02870 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D L6V35_09935 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D L6V35_09130 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D L6V35_02525 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D L6V35_07090 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D L6V35_07100 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D L6V35_07095 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D L6V35_07105 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D L6V35_07075 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D L6V35_04040 hypothetical protein K04516 AROA1; chorismate mutase [EC:5.4.99.5] D L6V35_04045 hypothetical protein K04516 AROA1; chorismate mutase [EC:5.4.99.5] D L6V35_04050 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D L6V35_04060 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:aput00410] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_01905 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:aput00430] D L6V35_06065 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D L6V35_03385 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D L6V35_00790 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:aput00450] D L6V35_01735 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D L6V35_02810 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D L6V35_01805 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:aput00470] D L6V35_05055 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D L6V35_02085 hypothetical protein K00824 dat; D-alanine transaminase [EC:2.6.1.21] D L6V35_03800 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D L6V35_05825 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:aput00511] D L6V35_01380 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis [PATH:aput00540] D L6V35_04835 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D L6V35_06095 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D L6V35_02860 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D L6V35_05250 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D L6V35_08910 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D L6V35_05795 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:aput00541] D L6V35_00830 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D L6V35_06105 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D L6V35_06115 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D L6V35_07290 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D L6V35_06005 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D L6V35_00850 UDP-N-acetyl glucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28] C 00550 Peptidoglycan biosynthesis [PATH:aput00550] D L6V35_03800 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D L6V35_03805 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D L6V35_05055 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D L6V35_07955 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D L6V35_01970 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D L6V35_02140 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D L6V35_05780 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D L6V35_02115 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:aput00552] D L6V35_07955 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D L6V35_01970 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:aput00543] D L6V35_06830 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:aput00730] D L6V35_07780 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D L6V35_09940 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D L6V35_01400 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C 00740 Riboflavin metabolism [PATH:aput00740] D L6V35_06970 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D L6V35_08815 hypothetical protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism D L6V35_07120 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00760 Nicotinate and nicotinamide metabolism [PATH:aput00760] D L6V35_05220 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D L6V35_10055 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D L6V35_00030 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D L6V35_07135 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D L6V35_04095 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D L6V35_05720 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] C 00770 Pantothenate and CoA biosynthesis [PATH:aput00770] D L6V35_09475 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D L6V35_09470 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D L6V35_08880 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D L6V35_01905 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D L6V35_08065 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D L6V35_04125 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D L6V35_09040 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D L6V35_02825 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:aput00780] D L6V35_03960 DUF452 family protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D L6V35_01810 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D L6V35_03950 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D L6V35_03305 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:aput00785] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00790 Folate biosynthesis [PATH:aput00790] D L6V35_02705 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D L6V35_09045 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D L6V35_06380 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D L6V35_02215 hypothetical protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D L6V35_04080 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] C 00670 One carbon pool by folate [PATH:aput00670] D L6V35_06380 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D L6V35_01805 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D L6V35_03130 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D L6V35_06395 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D L6V35_00760 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D L6V35_05100 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:aput00860] D L6V35_02285 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D L6V35_03010 manganese catalase family protein K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:aput00130] D L6V35_01945 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D L6V35_01195 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D L6V35_05080 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:aput00900] D L6V35_00410 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D L6V35_02195 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D L6V35_05915 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:aput00523] D L6V35_06105 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D L6V35_06115 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:aput00946] D L6V35_00785 family 78 glycoside hydrolase catalytic domain K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:aput00261] D L6V35_04625 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D L6V35_01745 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D L6V35_02335 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:aput00521] D L6V35_06105 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D L6V35_06115 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis D L6V35_06105 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00401 Novobiocin biosynthesis D L6V35_04050 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D L6V35_01810 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D L6V35_02050 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:aput00625] D L6V35_09765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D L6V35_09770 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D L6V35_06560 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase D L6V35_05525 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:aput03010] D L6V35_09285 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D L6V35_09330 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D L6V35_09345 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D L6V35_03210 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D L6V35_09290 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D L6V35_09295 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D L6V35_00990 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D L6V35_09370 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D L6V35_04860 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D L6V35_05505 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D L6V35_09340 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D L6V35_05510 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D L6V35_05500 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D L6V35_09320 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D L6V35_09380 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D L6V35_09335 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D L6V35_05660 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D L6V35_04635 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D L6V35_09390 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D L6V35_06275 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D L6V35_05560 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D L6V35_09375 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D L6V35_09325 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D L6V35_01715 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D L6V35_06785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D L6V35_06805 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:aput00970] D L6V35_02785 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D L6V35_06795 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D L6V35_06960 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D L6V35_04160 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D L6V35_02945 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D L6V35_05570 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D L6V35_08355 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D L6V35_08480 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D L6V35_07045 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D L6V35_05730 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D L6V35_10290 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D L6V35_04865 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D L6V35_08930 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D L6V35_07570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D L6V35_05475 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D L6V35_04855 tRNA-His K14226 tRNA-His; tRNA His D L6V35_06790 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D L6V35_08860 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D L6V35_06220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D L6V35_01550 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D L6V35_09570 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D L6V35_02725 tRNA-Ile K14230 tRNA-Met; tRNA Met D L6V35_06470 tRNA-Met K14230 tRNA-Met; tRNA Met D L6V35_03945 tRNA-Met K14230 tRNA-Met; tRNA Met D L6V35_00090 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D L6V35_01670 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D L6V35_07670 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D L6V35_04890 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D L6V35_07675 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D L6V35_06125 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D L6V35_07410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D L6V35_06635 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D L6V35_05465 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D L6V35_02410 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D L6V35_06885 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D L6V35_05485 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D L6V35_05470 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D L6V35_00450 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D L6V35_02810 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D L6V35_03695 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D L6V35_01510 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:aput03060] D L6V35_09315 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D L6V35_10115 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D L6V35_02580 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D L6V35_03860 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D L6V35_07515 S24/S26 family peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system D L6V35_08185 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:aput03018] D L6V35_07810 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D L6V35_08915 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D L6V35_06645 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK B B 09124 Replication and repair C 03030 DNA replication [PATH:aput03030] D L6V35_02710 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D L6V35_02075 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D L6V35_02080 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D L6V35_00475 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D L6V35_06955 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D L6V35_05390 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D L6V35_03615 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] C 03410 Base excision repair C 03420 Nucleotide excision repair D L6V35_03710 hypothetical protein K03703 uvrC; excinuclease ABC subunit C C 03430 Mismatch repair [PATH:aput03430] D L6V35_10240 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D L6V35_06020 hypothetical protein K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D L6V35_06015 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D L6V35_02075 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D L6V35_02080 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D L6V35_02710 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] C 03440 Homologous recombination [PATH:aput03440] D L6V35_01675 DciA family protein K03629 recF; DNA replication and repair protein RecF D L6V35_06505 DNA repair protein RecO C-terminal domain-containing protein K03584 recO; DNA repair protein RecO (recombination protein O) D L6V35_07065 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D L6V35_02075 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D L6V35_02080 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D L6V35_02710 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D L6V35_04355 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:aput02010] D L6V35_09510 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein D L6V35_05040 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D L6V35_03775 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D L6V35_05415 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D L6V35_09750 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D L6V35_06605 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein D L6V35_06610 energy-coupling factor transporter transmembrane protein EcfT K02008 cbiQ; cobalt/nickel transport system permease protein D L6V35_06620 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D L6V35_01950 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein D L6V35_02670 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D L6V35_09050 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D L6V35_08670 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:aput03070] D L6V35_09315 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D L6V35_10115 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D L6V35_02580 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:aput02020] D L6V35_01140 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein D L6V35_01135 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:aput02024] D L6V35_05980 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D L6V35_09315 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D L6V35_10115 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D L6V35_04325 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly D L6V35_04325 OmpA family protein K02557 motB; chemotaxis protein MotB C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D L6V35_00230 acyl-CoA mutase large subunit family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance D L6V35_02115 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:aput01502] D L6V35_03800 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D L6V35_05055 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D L6V35_03805 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D L6V35_02140 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:aput01503] D L6V35_05030 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:aput01000] C 01001 Protein kinases [BR:aput01001] D L6V35_01135 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D L6V35_06840 ATP-binding protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins C 01002 Peptidases and inhibitors [BR:aput01002] D L6V35_03860 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D L6V35_04475 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D L6V35_00445 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D L6V35_01215 pepT; tripeptide aminopeptidase PepT K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D L6V35_06900 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D L6V35_05130 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D L6V35_03180 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D L6V35_07515 S24/S26 family peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] D L6V35_02270 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D L6V35_09220 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D L6V35_00550 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D L6V35_03170 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] C 01003 Glycosyltransferases [BR:aput01003] D L6V35_06845 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D L6V35_05780 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] C 01005 Lipopolysaccharide biosynthesis proteins [BR:aput01005] D L6V35_04835 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D L6V35_05795 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D L6V35_02860 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D L6V35_08910 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D L6V35_05250 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D L6V35_06095 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:aput01011] D L6V35_05055 alr; alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D L6V35_03800 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D L6V35_02140 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D L6V35_07955 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D L6V35_01970 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D L6V35_05780 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D L6V35_02115 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D L6V35_05030 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:aput01004] D L6V35_01810 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D L6V35_05980 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D L6V35_02950 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D L6V35_09115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:aput01006] D L6V35_05915 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D L6V35_08890 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D L6V35_01195 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D L6V35_05080 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:aput01007] D L6V35_01510 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D L6V35_02810 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D L6V35_00450 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D L6V35_03695 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D L6V35_01735 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D L6V35_02085 hypothetical protein K00824 dat; D-alanine transaminase [EC:2.6.1.21] D L6V35_02825 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D L6V35_07120 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:aput03000] D L6V35_06890 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D L6V35_04075 Lrp/AsnC ligand binding domain-containing protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D L6V35_04570 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D L6V35_09260 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D L6V35_03305 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D L6V35_08810 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D L6V35_09265 PspC domain-containing protein K03973 pspC; phage shock protein C C 03021 Transcription machinery [BR:aput03021] D L6V35_05525 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D L6V35_09185 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D L6V35_05865 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D L6V35_05495 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D L6V35_01325 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D L6V35_08915 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:aput03019] D L6V35_07810 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D L6V35_08915 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D L6V35_06645 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK C 03041 Spliceosome C 03011 Ribosome [BR:aput03011] D L6V35_09285 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D L6V35_09330 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D L6V35_09345 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D L6V35_03210 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D L6V35_09290 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D L6V35_09295 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D L6V35_00990 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D L6V35_09370 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D L6V35_04860 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D L6V35_05505 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D L6V35_09340 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D L6V35_05510 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D L6V35_05500 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D L6V35_09320 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D L6V35_09380 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D L6V35_09335 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D L6V35_05660 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D L6V35_04635 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D L6V35_09390 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D L6V35_05560 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D L6V35_09375 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D L6V35_09325 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D L6V35_01715 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D L6V35_06275 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D L6V35_06805 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D L6V35_06785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 03009 Ribosome biogenesis [BR:aput03009] D L6V35_05865 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D L6V35_05495 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D L6V35_04780 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D L6V35_05060 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D L6V35_05805 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D L6V35_06515 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D L6V35_02230 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D L6V35_04810 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D L6V35_02440 GNAT family N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D L6V35_08180 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D L6V35_06775 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D L6V35_01400 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D L6V35_07770 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D L6V35_06150 hypothetical protein K09748 rimP; ribosome maturation factor RimP D L6V35_06895 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein C 03016 Transfer RNA biogenesis [BR:aput03016] D L6V35_02810 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D L6V35_00450 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D L6V35_03695 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D L6V35_01510 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D L6V35_02560 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D L6V35_09730 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D L6V35_08555 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D L6V35_00205 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D L6V35_07770 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D L6V35_08890 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D L6V35_02290 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D L6V35_08350 Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D L6V35_08345 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D L6V35_00530 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D L6V35_00635 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D L6V35_10025 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D L6V35_04830 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D L6V35_01405 RNA methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D L6V35_09065 hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D L6V35_08185 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D L6V35_04080 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D L6V35_01030 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D L6V35_05945 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D L6V35_08040 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE C 03012 Translation factors [BR:aput03012] D L6V35_04265 translation initiation factor K03113 EIF1; translation initiation factor 1 D L6V35_00460 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D L6V35_06030 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D L6V35_04340 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D L6V35_01435 methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D L6V35_09305 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 C 03110 Chaperones and folding catalysts [BR:aput03110] D L6V35_06645 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D L6V35_10225 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D L6V35_06290 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D L6V35_06900 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D L6V35_07560 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D L6V35_07555 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D L6V35_10040 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D L6V35_04380 trxA; thioredoxin K03671 TXN; thioredoxin D L6V35_09085 thioredoxin family protein K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:aput04131] D L6V35_03785 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:aput03032] D L6V35_05390 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D L6V35_08050 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta D L6V35_00475 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D L6V35_06955 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D L6V35_02075 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D L6V35_02080 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D L6V35_02710 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D L6V35_03615 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D L6V35_10420 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:aput03036] D L6V35_08050 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta D L6V35_02170 rod shape-determining protein K03590 ftsA; cell division protein FtsA D L6V35_02115 PASTA domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D L6V35_02135 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW D L6V35_02175 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D L6V35_05635 cell division protein ZapA K09888 zapA; cell division protein ZapA D L6V35_05030 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D L6V35_09505 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D L6V35_09905 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC C 03400 DNA repair and recombination proteins [BR:aput03400] D L6V35_01540 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D L6V35_08920 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] D L6V35_02715 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D L6V35_03710 hypothetical protein K03703 uvrC; excinuclease ABC subunit C D L6V35_05525 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D L6V35_10240 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D L6V35_06020 hypothetical protein K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D L6V35_06015 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D L6V35_02075 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D L6V35_02080 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D L6V35_02710 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D L6V35_07065 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D L6V35_04355 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D L6V35_01675 DciA family protein K03629 recF; DNA replication and repair protein RecF D L6V35_06505 DNA repair protein RecO C-terminal domain-containing protein K03584 recO; DNA repair protein RecO (recombination protein O) D L6V35_06250 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D L6V35_08050 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta D L6V35_07810 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D L6V35_01430 RecX family transcriptional regulator K03565 recX; regulatory protein D L6V35_02395 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D L6V35_00025 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:aput03029] D L6V35_00460 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D L6V35_01510 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D L6V35_02765 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D L6V35_07170 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family D L6V35_06645 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D L6V35_10225 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:aput02000] D L6V35_09510 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein D L6V35_05040 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D L6V35_03775 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D L6V35_04885 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D L6V35_04870 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D L6V35_05415 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D L6V35_09750 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D L6V35_06610 energy-coupling factor transporter transmembrane protein EcfT K02008 cbiQ; cobalt/nickel transport system permease protein D L6V35_06605 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein D L6V35_06620 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D L6V35_08670 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein D L6V35_01950 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein D L6V35_02670 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D L6V35_09050 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D L6V35_03720 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D L6V35_08565 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D L6V35_01180 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D L6V35_02190 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D L6V35_06130 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D L6V35_02315 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D L6V35_04325 OmpA family protein K02557 motB; chemotaxis protein MotB D L6V35_02470 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D L6V35_02465 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D L6V35_02545 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D L6V35_06555 CrcB family protein K06199 crcB; fluoride exporter D L6V35_02180 gldE; gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family D L6V35_01140 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein D L6V35_07170 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family D L6V35_03240 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D L6V35_08085 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D L6V35_08270 CidA/LrgA family protein K06518 cidA; holin-like protein D L6V35_06040 zupT; zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D L6V35_10165 SMR family transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D L6V35_04345 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein D L6V35_07480 hypothetical protein K07301 yrbG; cation:H+ antiporter D L6V35_07600 cation:proton antiporter K26730 napA; Na+:H+ antiporter D L6V35_05445 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D L6V35_02565 chloride channel protein K03281 clcA; chloride channel protein, CIC family D L6V35_04740 chromate transporter K07240 chrA; chromate transporter D L6V35_02135 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW D L6V35_03870 energy transducer TonB K03832 tonB; periplasmic protein TonB D L6V35_02050 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D L6V35_01135 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D L6V35_01875 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D L6V35_05595 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D L6V35_08130 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D L6V35_00975 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter C 02044 Secretion system [BR:aput02044] D L6V35_00485 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC D L6V35_10115 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D L6V35_09315 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D L6V35_02580 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:aput02042] D L6V35_02180 gldE; gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:aput02022] D L6V35_06840 ATP-binding protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:aput02035] D L6V35_04325 OmpA family protein K02557 motB; chemotaxis protein MotB C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:aput04812] D L6V35_09505 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D L6V35_02175 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D L6V35_02170 rod shape-determining protein K03590 ftsA; cell division protein FtsA C 04147 Exosome [BR:aput04147] D L6V35_03785 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D L6V35_04235 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D L6V35_06645 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D L6V35_09730 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D L6V35_05980 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D L6V35_00800 alpha amylase C-terminal domain-containing protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D L6V35_04595 FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D L6V35_08680 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:aput02048] D L6V35_06250 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D L6V35_06245 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D L6V35_06385 type II restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D L6V35_09265 PspC domain-containing protein K03973 pspC; phage shock protein C D L6V35_02175 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D L6V35_09505 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:aput01504] D L6V35_06630 CatA-like O-acetyltransferase, family 2 K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:aput03100] D L6V35_02785 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D L6V35_06795 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D L6V35_06960 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D L6V35_04160 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D L6V35_02945 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D L6V35_05570 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D L6V35_08355 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D L6V35_08480 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D L6V35_07045 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D L6V35_05730 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D L6V35_10290 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D L6V35_04865 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D L6V35_08930 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D L6V35_07570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D L6V35_05475 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D L6V35_04855 tRNA-His K14226 tRNA-His; tRNA His D L6V35_06790 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D L6V35_08860 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D L6V35_06220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D L6V35_01550 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D L6V35_09570 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D L6V35_02725 tRNA-Ile K14230 tRNA-Met; tRNA Met D L6V35_06470 tRNA-Met K14230 tRNA-Met; tRNA Met D L6V35_03945 tRNA-Met K14230 tRNA-Met; tRNA Met D L6V35_00090 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D L6V35_01670 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D L6V35_07670 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D L6V35_04890 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D L6V35_07675 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D L6V35_06125 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D L6V35_07410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D L6V35_06635 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D L6V35_05465 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D L6V35_02410 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D L6V35_06885 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D L6V35_05485 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D L6V35_05470 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D L6V35_06785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D L6V35_06805 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D L6V35_06070 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D L6V35_09685 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D L6V35_08595 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D L6V35_04765 hypothetical protein K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D L6V35_10275 sugar O-acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18] D L6V35_06550 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D L6V35_02210 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D L6V35_09585 cysteate synthase K15527 K15527; cysteate synthase [EC:2.5.1.76] D L6V35_01005 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D L6V35_06655 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D L6V35_07775 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D L6V35_06725 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D L6V35_08435 DUF1080 domain-containing protein K26288 E3.2.1.218; alpha-3'-ketoglucosidase [EC:3.2.1.218] D L6V35_07615 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D L6V35_04440 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D L6V35_07475 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D L6V35_00060 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D L6V35_00070 Fe-S cluster domain-containing protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D L6V35_08390 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D L6V35_08395 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D L6V35_08400 FMN-binding protein K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D L6V35_08410 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D L6V35_00055 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D L6V35_00045 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D L6V35_04605 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D L6V35_06870 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D L6V35_01025 cold-shock protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D L6V35_05140 trigger factor family protein K03545 tig; trigger factor D L6V35_06575 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein D L6V35_06585 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D L6V35_06590 urease accessory protein UreD K03190 ureD; urease accessory protein D L6V35_03855 OsmC family protein K07397 yhfA; putative redox protein C 99976 Replication and repair D L6V35_03155 JAB domain-containing protein K03630 radC; DNA repair protein RadC D L6V35_06540 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D L6V35_03085 YraN family protein K07460 yraN; putative endonuclease C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D L6V35_00795 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D L6V35_08215 GatB/YqeY domain-containing protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D L6V35_07215 hemerythrin domain-containing protein K07322 ytfE; regulator of cell morphogenesis and NO signaling C 99993 Cell motility C 99995 Signaling proteins D L6V35_04190 typA; translational GTPase TypA K06207 typA; GTP-binding protein D L6V35_01705 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D L6V35_07150 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D L6V35_07155 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D L6V35_08170 OmpH family outer membrane protein K06142 hlpA; outer membrane protein C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D L6V35_01395 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D L6V35_10345 patatin-like phospholipase family protein K07001 K07001; NTE family protein D L6V35_09840 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D L6V35_03715 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D L6V35_03725 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D L6V35_05260 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D L6V35_10145 SufE family protein K02426 sufE; cysteine desulfuration protein SufE C 99997 Function unknown D L6V35_01965 zinc metallopeptidase K06973 K06973; uncharacterized protein D L6V35_05545 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D L6V35_00040 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D L6V35_03105 aldo/keto reductase K07079 K07079; uncharacterized protein D L6V35_00310 metallophosphoesterase K07098 K07098; uncharacterized protein D L6V35_07650 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein D L6V35_09460 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein D L6V35_02425 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D L6V35_02295 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D L6V35_01895 DUF456 domain-containing protein K09793 K09793; uncharacterized protein D L6V35_10015 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D L6V35_04800 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D L6V35_00390 S1-like domain-containing RNA-binding protein K00243 K00243; uncharacterized protein D L6V35_09215 DMT family protein K09922 K09922; uncharacterized protein D L6V35_03490 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein D L6V35_03225 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024