+D GENES KO #

  KEGG Orthology (KO) - Arcanobacterium buesumense

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:arca00010] D HC352_00305 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_01600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_06640 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HC352_06650 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HC352_03580 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D HC352_00945 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HC352_04210 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HC352_04220 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HC352_04215 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HC352_08195 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HC352_07730 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HC352_04340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HC352_01175 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HC352_03425 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HC352_03520 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HC352_07490 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HC352_04870 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D HC352_00650 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HC352_03475 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D HC352_06955 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D HC352_00995 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HC352_02635 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HC352_07810 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:arca00020] D HC352_07390 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D HC352_03770 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D HC352_07480 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HC352_01685 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HC352_06670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HC352_06675 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HC352_06885 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HC352_06880 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HC352_06890 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HC352_06830 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HC352_06625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HC352_00995 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HC352_02635 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HC352_03425 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HC352_03520 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:arca00030] D HC352_06640 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HC352_04090 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HC352_04200 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HC352_00240 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D HC352_02365 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HC352_06530 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D HC352_08530 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D HC352_00650 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HC352_07765 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HC352_00945 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HC352_06650 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HC352_03580 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:arca00040] D HC352_04090 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HC352_00105 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D HC352_06090 sugar kinase K00854 xylB; xylulokinase [EC:2.7.1.17] C 00051 Fructose and mannose metabolism [PATH:arca00051] D HC352_00185 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HC352_07660 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HC352_07975 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HC352_06525 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HC352_06565 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HC352_06650 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HC352_03580 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D HC352_00945 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HC352_04210 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HC352_02365 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:arca00052] D HC352_04870 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D HC352_06015 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HC352_06025 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D HC352_06020 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HC352_00650 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HC352_00305 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_01600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_00955 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HC352_06060 ebgA; beta-galactosidase subunit alpha K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23] D HC352_06055 DUF386 family protein K12112 ebgC; evolved beta-galactosidase subunit beta D HC352_02695 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D HC352_06650 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HC352_01840 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:arca00500] D HC352_01840 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D HC352_04485 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D HC352_01865 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D HC352_01890 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D HC352_01875 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D HC352_02325 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D HC352_01870 hypothetical protein K16146 pep2; maltokinase [EC:2.7.1.175] D HC352_01880 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D HC352_04480 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D HC352_07810 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HC352_01985 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D HC352_03800 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D HC352_03795 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D HC352_03790 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D HC352_00650 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HC352_00305 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_01600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_06640 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HC352_00185 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HC352_07660 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00620 Pyruvate metabolism [PATH:arca00620] D HC352_03425 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HC352_03520 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HC352_02220 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D HC352_06815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HC352_06810 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HC352_04340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HC352_05830 spxB; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3] D HC352_07490 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HC352_03940 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D HC352_07015 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D HC352_02165 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D HC352_06625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HC352_06830 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HC352_00995 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HC352_02635 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HC352_01175 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:arca00630] D HC352_06625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HC352_07390 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D HC352_03770 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D HC352_06230 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D HC352_06705 catalase K03781 katE; catalase [EC:1.11.1.6] D HC352_03410 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D HC352_08900 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D HC352_03490 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_03505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_06585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HC352_01685 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D HC352_06590 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:arca00640] D HC352_06815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HC352_06810 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HC352_02220 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D HC352_06230 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D HC352_06675 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HC352_06670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HC352_00270 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D HC352_03770 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D HC352_07490 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:arca00650] D HC352_06885 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HC352_06880 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HC352_06890 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HC352_02220 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] C 00660 C5-Branched dibasic acid metabolism D HC352_06675 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HC352_06670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:arca00562] D HC352_00880 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D HC352_03855 CDP-alcohol phosphatidyltransferase family protein K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-] D HC352_00235 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D HC352_00230 TIM barrel protein K03335 iolE; inosose dehydratase [EC:4.2.1.44] D HC352_00265 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D HC352_00260 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D HC352_00250 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D HC352_00270 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D HC352_04210 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:arca00190] D HC352_01420 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D HC352_01425 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D HC352_01430 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D HC352_01435 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D HC352_01440 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D HC352_01445 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D HC352_01450 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D HC352_01455 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D HC352_01460 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D HC352_01465 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D HC352_01470 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D HC352_01475 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D HC352_01480 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D HC352_01485 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D HC352_06030 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D HC352_06885 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HC352_06880 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HC352_06890 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HC352_05205 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HC352_05210 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HC352_01780 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HC352_01790 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HC352_01785 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HC352_01775 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HC352_01795 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HC352_01760 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HC352_01770 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HC352_01765 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HC352_01205 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:arca00710] D HC352_04215 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HC352_04220 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HC352_00945 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HC352_04200 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HC352_02365 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HC352_04210 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HC352_04090 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HC352_00240 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D HC352_01175 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HC352_06625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:arca00720] D HC352_01175 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HC352_06625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HC352_06830 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HC352_06885 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HC352_06880 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HC352_06890 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HC352_06670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HC352_06675 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HC352_00210 zinc-binding dehydrogenase K14465 K14465; succinate semialdehyde reductase (NADPH) [EC:1.1.1.-] D HC352_07480 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HC352_03770 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D HC352_03765 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D HC352_06580 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HC352_06810 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HC352_06815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:arca00680] D HC352_06585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HC352_07730 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HC352_06625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HC352_00945 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HC352_06650 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HC352_06815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HC352_06810 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HC352_08195 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HC352_05110 hypothetical protein K06034 comD; sulfopyruvate decarboxylase subunit alpha [EC:4.1.1.79] C 00910 Nitrogen metabolism [PATH:arca00910] D HC352_01005 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HC352_03490 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_03505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism [PATH:arca00920] D HC352_03440 hypothetical protein K00299 ssuE; FMN reductase [EC:1.5.1.38] D HC352_02370 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HC352_02375 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HC352_06485 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D HC352_06480 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:arca00061] D HC352_03395 hypothetical protein K02078 acpP; acyl carrier protein D HC352_06225 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D HC352_04655 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HC352_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D HC352_03140 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D HC352_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D HC352_03140 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:arca00074] D HC352_06220 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D HC352_03395 hypothetical protein K02078 acpP; acyl carrier protein D HC352_06225 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:arca00561] D HC352_02765 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D HC352_05765 HPr family phosphocarrier protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D HC352_01280 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D HC352_04585 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D HC352_05305 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HC352_08015 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HC352_05030 hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D HC352_08625 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D HC352_02695 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:arca00564] D HC352_01305 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D HC352_01300 glpB; glycerol-3-phosphate dehydrogenase subunit GlpB K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3] D HC352_01295 anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D HC352_05305 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HC352_08015 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HC352_05030 hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D HC352_08625 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D HC352_00325 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D HC352_01705 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D HC352_02920 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D HC352_03385 phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D HC352_03070 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D HC352_02145 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:arca00600] D HC352_00955 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HC352_08555 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] D HC352_02695 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D HC352_00755 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:arca01040] D HC352_01680 lysophospholipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D HC352_02320 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:arca00230] D HC352_00650 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HC352_07765 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HC352_03730 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HC352_03755 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D HC352_03740 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HC352_03760 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D HC352_03735 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D HC352_03720 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D HC352_01000 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D HC352_03725 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D HC352_06070 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HC352_03750 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HC352_03745 inosine monophosphate cyclohydrolase K11176 purO; IMP cyclohydrolase [EC:3.5.4.10] D HC352_03920 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HC352_01170 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D HC352_06035 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D HC352_06290 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D HC352_06520 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D HC352_04900 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D HC352_03235 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HC352_07725 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D HC352_06835 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HC352_06855 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HC352_02760 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HC352_05690 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D HC352_06775 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HC352_06080 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7] D HC352_04055 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D HC352_00570 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HC352_00580 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HC352_08435 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D HC352_03325 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D HC352_03925 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HC352_07585 RelA/SpoT domain-containing protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D HC352_07375 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D HC352_06075 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HC352_07260 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D HC352_07060 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:arca00240] D HC352_04980 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HC352_04955 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HC352_04985 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D HC352_04970 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D HC352_04975 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D HC352_04960 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D HC352_04965 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D HC352_02910 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D HC352_02760 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HC352_07385 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D HC352_04170 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D HC352_01290 ATP-binding protein K00876 udk; uridine kinase [EC:2.7.1.48] D HC352_07220 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D HC352_01170 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D HC352_06035 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D HC352_06290 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D HC352_07725 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D HC352_08600 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D HC352_06540 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D HC352_08435 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D HC352_00730 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D HC352_00570 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HC352_00580 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HC352_08415 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D HC352_06535 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D HC352_03665 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D HC352_02100 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:arca00250] D HC352_07250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HC352_02210 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D HC352_02465 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HC352_02470 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HC352_06075 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HC352_06070 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HC352_04955 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HC352_01005 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HC352_04920 aldehyde dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HC352_03490 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_03505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_04980 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HC352_06925 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HC352_03730 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:arca00260] D HC352_01720 hypothetical protein K00872 thrB; homoserine kinase [EC:2.7.1.39] D HC352_06585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HC352_08195 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HC352_08065 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D HC352_08070 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HC352_03845 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HC352_01160 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:arca00270] D HC352_02370 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HC352_02375 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HC352_04070 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HC352_00550 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D HC352_03235 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HC352_00920 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HC352_00555 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D HC352_01720 hypothetical protein K00872 thrB; homoserine kinase [EC:2.7.1.39] D HC352_02215 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HC352_07250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HC352_07490 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HC352_06625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HC352_03845 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:arca00280] D HC352_02215 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HC352_06230 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D HC352_00270 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:arca00290] D HC352_02215 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:arca00300] D HC352_04670 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HC352_04650 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HC352_08900 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D HC352_03190 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HC352_03195 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:arca00220] D HC352_02465 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HC352_02470 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HC352_03490 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_03505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_04980 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HC352_01005 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HC352_07250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HC352_04650 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:arca00330] D HC352_02730 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D HC352_04920 aldehyde dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HC352_07250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism [PATH:arca00350] D HC352_07250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HC352_07495 2-oxo-hepta-3-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] C 00360 Phenylalanine metabolism [PATH:arca00360] D HC352_07250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HC352_04520 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component C 00380 Tryptophan metabolism [PATH:arca00380] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HC352_06705 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:arca00400] D HC352_03585 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HC352_04030 aroB; 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D HC352_00695 aroD; type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D HC352_01585 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D HC352_04025 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D HC352_01160 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D HC352_07250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:arca00410] D HC352_01270 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D HC352_01265 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D HC352_00270 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:arca00430] D HC352_06810 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HC352_06815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:arca00450] D HC352_04510 sufS; SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D HC352_08895 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HC352_07840 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D HC352_06585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:arca00470] D HC352_06915 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HC352_05300 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HC352_05720 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HC352_03205 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] C 00480 Glutathione metabolism [PATH:arca00480] D HC352_03535 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HC352_02350 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HC352_04150 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HC352_07480 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:arca00520] D HC352_07810 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HC352_01605 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D HC352_07815 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D HC352_07770 NTP transferase domain-containing protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HC352_05310 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HC352_07265 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HC352_00755 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HC352_01615 amidohydrolase family protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D HC352_06935 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D HC352_01610 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D HC352_06925 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HC352_00185 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HC352_07660 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HC352_06640 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HC352_07975 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HC352_00305 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_01600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_03475 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D HC352_06955 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D HC352_00650 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HC352_06015 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HC352_06025 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D HC352_06020 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HC352_06525 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HC352_06565 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HC352_04485 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D HC352_00445 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:arca00541] D HC352_07770 NTP transferase domain-containing protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HC352_00445 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HC352_00330 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HC352_00425 dTDP-4-keto-6-deoxy-D-glucose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HC352_00420 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D HC352_06565 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:arca00511] D HC352_08555 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] D HC352_00955 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D HC352_06060 ebgA; beta-galactosidase subunit alpha K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23] D HC352_06055 DUF386 family protein K12112 ebgC; evolved beta-galactosidase subunit beta D HC352_00755 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HC352_00175 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D HC352_00310 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:arca00542] D HC352_01750 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00550 Peptidoglycan biosynthesis [PATH:arca00550] D HC352_05310 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HC352_07265 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HC352_03220 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HC352_03205 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HC352_03190 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HC352_05300 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HC352_03195 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HC352_04730 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HC352_04390 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HC352_03200 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HC352_03215 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HC352_00490 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D HC352_03210 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D HC352_03185 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HC352_00485 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D HC352_01210 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D HC352_08740 DUF1727 domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D HC352_08745 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D HC352_00785 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] D HC352_02060 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] D HC352_02065 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] D HC352_02070 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] C 00552 Teichoic acid biosynthesis [PATH:arca00552] D HC352_04390 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HC352_01750 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D HC352_00370 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:arca00572] D HC352_01750 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D HC352_00320 glycosyltransferase family 2 protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] C 00543 Exopolysaccharide biosynthesis [PATH:arca00543] D HC352_01750 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D HC352_02370 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:arca00730] D HC352_03775 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HC352_05295 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D HC352_01580 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D HC352_07060 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:arca00740] D HC352_03030 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D HC352_03440 hypothetical protein K00299 ssuE; FMN reductase [EC:1.5.1.38] C 00750 Vitamin B6 metabolism D HC352_05915 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D HC352_05910 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:arca00760] D HC352_05735 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D HC352_06520 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D HC352_04900 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D HC352_01170 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D HC352_06035 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D HC352_06290 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D HC352_05170 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D HC352_01990 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D HC352_05780 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D HC352_03075 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D HC352_07845 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D HC352_04570 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D HC352_04845 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D HC352_04840 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:arca00770] D HC352_03485 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D HC352_01265 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D HC352_06930 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D HC352_04065 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D HC352_05275 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D HC352_04280 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D HC352_06220 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D HC352_02215 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HC352_01270 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:arca00780] D HC352_04655 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HC352_06240 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:arca00785] D HC352_07450 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D HC352_07455 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HC352_03425 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HC352_03520 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D HC352_01685 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] C 00790 Folate biosynthesis [PATH:arca00790] D HC352_01230 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D HC352_01240 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3] D HC352_01235 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D HC352_02095 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HC352_02755 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D HC352_06460 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D HC352_06435 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HC352_06440 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D HC352_07915 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D HC352_06505 NTP transferase domain-containing protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:arca00670] D HC352_02095 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HC352_03765 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D HC352_06580 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HC352_06585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HC352_03740 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HC352_03750 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HC352_02100 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D HC352_06590 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D HC352_07920 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D HC352_04070 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:arca00860] D HC352_00850 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HC352_05380 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HC352_05825 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:arca00130] D HC352_01410 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D HC352_01405 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D HC352_01395 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D HC352_01390 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D HC352_01380 AMP-binding protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D HC352_01385 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D HC352_01375 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:arca00900] D HC352_03775 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HC352_02935 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D HC352_08185 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D HC352_07805 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D HC352_08180 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D HC352_02945 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D HC352_07645 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D HC352_03605 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HC352_07665 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D HC352_04730 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D HC352_04200 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:arca00523] D HC352_00445 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HC352_00330 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HC352_00425 dTDP-4-keto-6-deoxy-D-glucose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HC352_00420 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D HC352_01405 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D HC352_00330 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis D HC352_04670 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:arca00521] D HC352_00305 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_01600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_00650 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HC352_00880 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D HC352_00235 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D HC352_00445 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HC352_00330 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HC352_00425 dTDP-4-keto-6-deoxy-D-glucose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HC352_00420 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D HC352_00305 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HC352_01600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:arca00525] D HC352_00445 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HC352_00330 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis D HC352_07250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D HC352_04655 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D HC352_03395 hypothetical protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D HC352_04070 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites D HC352_03605 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:arca03020] D HC352_07205 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HC352_07200 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HC352_06965 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HC352_04060 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:arca03010] D HC352_02170 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_04605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_07545 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_08235 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_02175 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_04600 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_07540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_08230 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_02180 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HC352_04595 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HC352_07535 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HC352_08225 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HC352_04310 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HC352_02870 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HC352_07135 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HC352_03995 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HC352_07080 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HC352_08855 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HC352_07185 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HC352_07095 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HC352_06940 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HC352_07170 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HC352_06970 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HC352_07190 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HC352_06975 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HC352_07100 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D HC352_03035 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HC352_02805 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HC352_07120 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HC352_08845 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HC352_07145 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HC352_04835 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HC352_07225 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HC352_07150 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HC352_07165 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HC352_07160 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HC352_07105 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HC352_07090 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HC352_08840 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HC352_07215 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HC352_07230 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HC352_07210 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HC352_06945 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HC352_07115 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HC352_07070 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HC352_07130 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HC352_06960 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HC352_07085 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HC352_02825 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HC352_04700 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HC352_05195 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HC352_07140 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HC352_05590 hypothetical protein K02892 RP-L23; large subunit ribosomal protein L23 D HC352_07155 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HC352_07110 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HC352_07745 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D HC352_05190 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HC352_02645 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HC352_05290 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HC352_07125 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HC352_07075 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HC352_01730 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HC352_05000 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HC352_02385 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HC352_02650 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HC352_07270 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HC352_08940 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HC352_04705 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HC352_06980 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:arca00970] D HC352_00045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HC352_05140 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HC352_05150 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HC352_01710 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HC352_02295 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HC352_07950 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HC352_08730 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HC352_03380 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HC352_01040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HC352_01050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HC352_03820 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HC352_05375 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HC352_07775 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HC352_01055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HC352_05365 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HC352_05370 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HC352_02605 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HC352_02660 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HC352_03815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HC352_03830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HC352_02285 tRNA-His K14226 tRNA-His; tRNA His D HC352_00040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HC352_00510 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HC352_04335 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HC352_04410 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HC352_05670 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HC352_07705 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HC352_01085 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HC352_02265 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HC352_02270 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HC352_02040 tRNA-Met K14230 tRNA-Met; tRNA Met D HC352_03355 tRNA-Ile K14230 tRNA-Met; tRNA Met D HC352_07275 tRNA-Met K14230 tRNA-Met; tRNA Met D HC352_01045 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HC352_02665 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HC352_04155 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HC352_08520 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HC352_08135 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HC352_08590 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HC352_08645 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HC352_08650 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HC352_07280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HC352_08095 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HC352_08400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HC352_07245 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HC352_07285 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HC352_03435 tRNA-Val K14237 tRNA-Val; tRNA Val D HC352_03810 tRNA-Val K14237 tRNA-Val; tRNA Val D HC352_03825 tRNA-Val K14237 tRNA-Val; tRNA Val D HC352_03835 tRNA-Val K14237 tRNA-Val; tRNA Val D HC352_00850 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HC352_05380 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HC352_02155 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HC352_02160 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HC352_02150 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HC352_04000 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HC352_03970 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HC352_03305 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HC352_03850 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HC352_08630 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HC352_08170 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HC352_07840 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HC352_04080 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HC352_02725 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HC352_04875 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HC352_02750 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HC352_01275 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HC352_04950 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HC352_01715 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HC352_02955 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HC352_03945 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HC352_04665 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HC352_04660 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HC352_04630 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HC352_01895 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes [PATH:arca03008] D HC352_05260 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HC352_02290 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:arca03060] D HC352_07065 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HC352_07240 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HC352_04205 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HC352_03910 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HC352_03915 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HC352_03905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HC352_08925 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D HC352_01495 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HC352_02785 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HC352_02780 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HC352_06420 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D HC352_06495 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D HC352_06415 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D HC352_02830 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HC352_03255 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:arca04122] D HC352_06460 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D HC352_06455 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein D HC352_06445 HesA/MoeB/ThiF family protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D HC352_06435 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] C 03050 Proteasome D HC352_04370 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:arca03018] D HC352_05200 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D HC352_07730 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HC352_03040 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HC352_03960 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HC352_01725 transcription termination factor Rho K03628 rho; transcription termination factor Rho D HC352_03055 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D HC352_06650 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HC352_00805 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HC352_08040 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HC352_08875 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B B 09124 Replication and repair C 03030 DNA replication [PATH:arca03030] D HC352_03625 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HC352_06840 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HC352_03270 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HC352_08125 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HC352_08410 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HC352_04850 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HC352_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HC352_08825 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HC352_03350 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HC352_02310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_08850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_00540 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HC352_02835 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HC352_02140 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:arca03410] D HC352_08490 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HC352_08055 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HC352_01315 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HC352_00890 xth; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D HC352_06575 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D HC352_02140 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:arca03420] D HC352_07735 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HC352_04245 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D HC352_04265 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D HC352_04240 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D HC352_01995 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HC352_06360 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HC352_06685 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HC352_02140 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:arca03430] D HC352_01995 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HC352_06360 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HC352_06685 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HC352_07650 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HC352_07655 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HC352_02310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_08850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_03270 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HC352_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HC352_08125 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HC352_04850 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HC352_08410 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HC352_03625 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HC352_06840 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HC352_02140 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:arca03440] D HC352_02310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_08850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D HC352_04735 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HC352_08120 recR; recombination protein RecR K06187 recR; recombination protein RecR D HC352_03090 recA; recombinase RecA K03553 recA; recombination protein RecA D HC352_03895 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HC352_03900 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HC352_03890 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HC352_05285 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HC352_08735 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HC352_03270 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HC352_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HC352_08125 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HC352_04850 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HC352_08410 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HC352_03625 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HC352_06840 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HC352_04075 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:arca03250] D HC352_00460 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:arca02010] D HC352_06425 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D HC352_06430 modB; molybdate ABC transporter permease subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D HC352_05805 solute-binding protein K02011 afuB; iron(III) transport system permease protein D HC352_05800 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D HC352_00740 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D HC352_00745 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein D HC352_00750 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D HC352_05065 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D HC352_05060 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D HC352_08110 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D HC352_01850 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D HC352_01855 ABC transporter permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HC352_01860 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HC352_00770 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D HC352_00765 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein D HC352_00760 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein D HC352_06560 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D HC352_06550 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D HC352_06545 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D HC352_06555 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D HC352_00115 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D HC352_00110 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HC352_00120 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HC352_03340 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein D HC352_03335 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D HC352_06185 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D HC352_06180 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D HC352_06175 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D HC352_06170 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D HC352_05990 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein D HC352_05985 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D HC352_05980 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D HC352_04915 ABC transporter K02073 metQ; D-methionine transport system substrate-binding protein D HC352_04910 ABC transporter permease subunit K02072 metI; D-methionine transport system permease protein D HC352_04905 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D HC352_07430 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D HC352_07445 ABC transporter permease K13890 gsiC; glutathione transport system permease protein D HC352_07440 ABC transporter permease K13891 gsiD; glutathione transport system permease protein D HC352_07435 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D HC352_05955 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein D HC352_05945 metal ABC transporter permease K11602 mntB; manganese transport system permease protein D HC352_05950 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D HC352_03300 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D HC352_03290 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D HC352_03295 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D HC352_00705 zinc ABC transporter solute-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D HC352_00715 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D HC352_00720 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D HC352_00710 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D HC352_06215 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D HC352_05935 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D HC352_06160 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D HC352_06305 ABC transporter permease K09811 ftsX; cell division transport system permease protein D HC352_06310 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HC352_06150 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HC352_06145 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HC352_03420 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D HC352_03415 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D HC352_05240 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D HC352_05235 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:arca02060] D HC352_07525 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HC352_07530 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HC352_07810 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HC352_07815 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D HC352_07515 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:arca03070] D HC352_03910 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HC352_03915 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HC352_07240 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HC352_04205 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HC352_07065 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HC352_03905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HC352_08925 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D HC352_01495 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HC352_02780 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HC352_02785 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HC352_06420 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D HC352_06495 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D HC352_06415 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D HC352_08350 type IV secretory system conjugative DNA transfer family protein B B 09132 Signal transduction C 02020 Two-component system [PATH:arca02020] D HC352_06195 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D HC352_06190 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3 D HC352_06185 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D HC352_01400 PDZ domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D HC352_07315 HAMP domain-containing protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D HC352_07320 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA D HC352_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HC352_05955 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein D HC352_05950 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D HC352_05945 metal ABC transporter permease K11602 mntB; manganese transport system permease protein D HC352_02165 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D HC352_07880 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HC352_07885 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR D HC352_05245 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D HC352_05250 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR D HC352_06335 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D HC352_06350 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HC352_08470 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HC352_06345 type II secretion system protein F K12510 tadB; tight adherence protein B D HC352_08465 hypothetical protein K12510 tadB; tight adherence protein B D HC352_06340 type II secretion system F family protein K12511 tadC; tight adherence protein C D HC352_08460 hypothetical protein K12511 tadC; tight adherence protein C D HC352_03490 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_03505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_08495 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HC352_05205 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HC352_05210 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HC352_00585 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome [PATH:arca04142] D HC352_00310 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D HC352_00755 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HC352_08555 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 04146 Peroxisome [PATH:arca04146] D HC352_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D HC352_03140 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D HC352_01990 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D HC352_07480 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HC352_06705 catalase K03781 katE; catalase [EC:1.11.1.6] D HC352_03565 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:arca02024] D HC352_00555 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D HC352_00440 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D HC352_03585 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HC352_08835 hypothetical protein K20276 bapA; large repetitive protein D HC352_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D HC352_03140 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D HC352_08495 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HC352_00285 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HC352_00290 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HC352_04685 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HC352_00295 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HC352_04680 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HC352_00300 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HC352_04675 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D HC352_08925 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D HC352_07240 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HC352_04205 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HC352_07065 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HC352_03905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HC352_01495 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HC352_02780 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HC352_02785 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HC352_04690 ABC transporter substrate-binding protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D HC352_00115 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly [PATH:arca02040] D HC352_05990 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein D HC352_03620 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D HC352_07730 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:arca04981] D HC352_07920 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D HC352_02095 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HC352_06585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HC352_02100 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance D HC352_03185 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:arca01502] D HC352_05300 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HC352_06915 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HC352_03195 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HC352_03200 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HC352_03215 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance D HC352_00460 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:arca01000] C 01001 Protein kinases [BR:arca01001] D HC352_00480 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HC352_03590 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HC352_08755 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D HC352_06195 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D HC352_07315 HAMP domain-containing protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D HC352_05820 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HC352_08010 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HC352_07880 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HC352_05245 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D HC352_02110 PAS domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:arca01009] D HC352_06650 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HC352_00495 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:arca01002] D HC352_03255 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D HC352_04930 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D HC352_06775 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HC352_01200 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D HC352_07960 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D HC352_03730 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HC352_06925 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HC352_07625 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D HC352_02350 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HC352_04150 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HC352_05325 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D HC352_02360 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D HC352_03535 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HC352_07510 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D HC352_03480 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HC352_07055 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HC352_06390 M24 family metallopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D HC352_01225 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HC352_03875 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-] D HC352_01400 PDZ domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D HC352_04935 S8 family serine peptidase K01361 E3.4.21.96; lactocepin [EC:3.4.21.96] D HC352_00800 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D HC352_00545 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D HC352_01210 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D HC352_02675 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HC352_02680 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HC352_02010 pdz/dhr/glgf protein K07177 K07177; Lon-like protease D HC352_03125 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D HC352_02830 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] C 01003 Glycosyltransferases [BR:arca01003] D HC352_03865 glycosyltransferase family 4 protein K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D HC352_05320 glycosyltransferase family 4 protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D HC352_04480 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D HC352_00490 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D HC352_03210 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D HC352_01750 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D HC352_00320 glycosyltransferase family 2 protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] C 01005 Lipopolysaccharide biosynthesis proteins [BR:arca01005] D HC352_00440 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D HC352_01750 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:arca01011] D HC352_05310 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HC352_07265 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HC352_03220 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HC352_03205 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HC352_03190 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HC352_05300 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HC352_00785 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] D HC352_02060 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] D HC352_02065 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] D HC352_02070 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] D HC352_06915 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HC352_05720 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HC352_03200 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HC352_03215 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HC352_04390 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HC352_01035 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase D HC352_04545 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase D HC352_03185 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HC352_00485 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D HC352_01210 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D HC352_00490 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D HC352_03210 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D HC352_01200 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D HC352_07960 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D HC352_04010 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:arca01004] D HC352_06225 DUF1729 domain-containing protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D HC352_04655 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HC352_01680 lysophospholipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D HC352_02320 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D HC352_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D HC352_03140 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D HC352_07460 long-chain fatty acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D HC352_05305 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HC352_08015 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:arca01006] D HC352_03605 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HC352_07665 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D HC352_04730 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HC352_03105 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HC352_01375 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:arca01007] D HC352_00850 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HC352_05380 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HC352_04630 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HC352_01895 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HC352_08170 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HC352_01715 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HC352_07840 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HC352_02750 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HC352_02725 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HC352_04875 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HC352_01275 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HC352_04950 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HC352_03970 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HC352_03945 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HC352_03305 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HC352_08630 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HC352_02955 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HC352_03850 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HC352_04000 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HC352_04665 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HC352_04660 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HC352_07250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HC352_08065 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D HC352_04650 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HC352_02215 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:arca00194] D HC352_01795 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HC352_01790 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HC352_01785 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HC352_01780 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HC352_01775 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HC352_01770 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HC352_01765 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HC352_01760 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:arca03000] D HC352_00920 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HC352_01845 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D HC352_00245 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D HC352_00820 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D HC352_03285 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HC352_08495 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HC352_02430 winged helix-turn-helix transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D HC352_03080 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator D HC352_05075 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D HC352_07965 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D HC352_00725 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D HC352_06240 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HC352_05895 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D HC352_04920 aldehyde dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HC352_07520 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D HC352_07820 PRD domain-containing protein K03480 glcT; transcriptional antiterminator D HC352_02115 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D HC352_06860 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D HC352_07345 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D HC352_08505 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D HC352_08905 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HC352_08190 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D HC352_04645 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D HC352_04770 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D HC352_01310 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D HC352_08545 hypothetical protein K05346 deoR; deoxyribonucleoside regulator D HC352_02090 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D HC352_03135 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D HC352_03170 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:arca03021] D HC352_06965 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HC352_07205 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HC352_07200 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HC352_04060 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HC352_03620 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D HC352_01620 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HC352_05875 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HC352_02970 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D HC352_04045 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HC352_07235 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D HC352_07675 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D HC352_01725 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:arca03019] D HC352_05200 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D HC352_05260 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HC352_03055 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D HC352_02290 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D HC352_03960 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HC352_07730 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HC352_03040 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HC352_01725 transcription termination factor Rho K03628 rho; transcription termination factor Rho D HC352_06650 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HC352_00805 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HC352_08040 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HC352_04235 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D HC352_04120 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D HC352_00620 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D HC352_08775 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:arca03011] D HC352_04310 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HC352_02870 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HC352_07135 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HC352_03995 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HC352_07080 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HC352_08855 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HC352_07185 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HC352_07095 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HC352_06940 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HC352_07170 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HC352_06970 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HC352_07190 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HC352_06975 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HC352_07100 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D HC352_03035 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HC352_02805 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HC352_07120 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HC352_08845 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HC352_07145 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HC352_04835 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HC352_07225 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HC352_07150 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HC352_07165 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HC352_07160 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HC352_07105 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HC352_07090 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HC352_08840 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HC352_07215 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HC352_07230 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HC352_07210 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HC352_06945 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HC352_07115 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HC352_07070 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HC352_07130 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HC352_06960 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HC352_07085 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HC352_02825 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HC352_04700 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HC352_05195 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HC352_07140 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HC352_05590 hypothetical protein K02892 RP-L23; large subunit ribosomal protein L23 D HC352_07155 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HC352_07110 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HC352_05190 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HC352_02645 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HC352_05290 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HC352_07125 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HC352_07075 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HC352_01730 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HC352_05000 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HC352_02385 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HC352_02650 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HC352_07270 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HC352_08940 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HC352_04705 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HC352_06980 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HC352_07745 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D HC352_02170 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_04605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_07545 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_08235 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_02175 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_04600 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_07540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_08230 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_02180 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HC352_04595 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HC352_07535 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HC352_08225 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:arca03009] D HC352_05260 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HC352_02290 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D HC352_04740 GTPase Era K03595 era; GTPase D HC352_05185 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D HC352_02970 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D HC352_04045 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HC352_07235 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D HC352_07825 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D HC352_04085 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D HC352_03110 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D HC352_07890 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D HC352_05280 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D HC352_04760 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D HC352_08915 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HC352_03175 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D HC352_07855 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D HC352_04575 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D HC352_08165 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D HC352_02925 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D HC352_08750 methyltransferase domain-containing protein K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D HC352_06805 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D HC352_04175 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D HC352_03260 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HC352_06895 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D HC352_02815 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D HC352_05200 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D HC352_04005 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D HC352_03960 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HC352_01580 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D HC352_04165 ribosome biogenesis GTPase Der K03977 engA; GTPase D HC352_03115 hflX; GTPase HflX K03665 hflX; GTPase D HC352_01745 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HC352_03925 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HC352_02985 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D HC352_02965 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D HC352_03275 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D HC352_05160 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D HC352_04750 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D HC352_07635 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D HC352_05265 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:arca03016] D HC352_08875 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D HC352_00850 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HC352_05380 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HC352_02955 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HC352_02750 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HC352_04875 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HC352_07840 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HC352_01715 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HC352_01275 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HC352_04950 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HC352_03970 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HC352_04000 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HC352_03305 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HC352_03850 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HC352_08630 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HC352_08170 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HC352_02725 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HC352_03945 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HC352_04665 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HC352_04660 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HC352_04630 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HC352_01895 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HC352_01135 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D HC352_04880 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HC352_04375 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D HC352_04810 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D HC352_06950 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D HC352_02990 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D HC352_01745 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HC352_03105 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HC352_08935 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D HC352_05695 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D HC352_03780 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D HC352_02315 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D HC352_00840 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D HC352_08595 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D HC352_03100 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D HC352_02820 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D HC352_04450 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D HC352_04695 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D HC352_06805 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D HC352_01130 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D HC352_08790 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D HC352_01220 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D HC352_06900 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D HC352_06875 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D HC352_06910 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D HC352_03040 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:arca03012] D HC352_02980 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HC352_04710 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HC352_02875 elongation factor Ts K02357 tsf; elongation factor Ts D HC352_07175 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HC352_07180 fusA; elongation factor G K02355 fusA; elongation factor G D HC352_01735 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D HC352_02915 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D HC352_01740 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D HC352_07740 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D HC352_06985 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D HC352_04040 efp; elongation factor P K02356 efp; elongation factor P D HC352_06315 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:arca03110] D HC352_00865 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D HC352_01140 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D HC352_02685 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D HC352_00805 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HC352_08040 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HC352_00815 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ D HC352_04765 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D HC352_00810 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D HC352_02905 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D HC352_06865 co-chaperone GroES K04078 groES; chaperonin GroES D HC352_01225 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HC352_01760 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HC352_06470 molecular chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D HC352_04935 S8 family serine peptidase K01361 E3.4.21.96; lactocepin [EC:3.4.21.96] D HC352_00755 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HC352_00460 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D HC352_05175 trxA; thioredoxin K03671 TXN; thioredoxin D HC352_01835 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:arca04131] D HC352_02760 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HC352_08675 hypothetical protein K07192 FLOT; flotillin D HC352_00175 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D HC352_04220 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HC352_08195 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HC352_04340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HC352_08175 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:arca04121] D HC352_04360 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:arca03051] D HC352_04370 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase D HC352_04355 Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D HC352_04110 WYL domain-containing protein K13572 pafB; proteasome accessory factor B D HC352_04115 WYL domain-containing protein K13573 pafC; proteasome accessory factor C D HC352_04365 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:arca03032] D HC352_00540 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HC352_00920 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HC352_05750 integration host factor K03530 hupB; DNA-binding protein HU-beta D HC352_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HC352_08825 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HC352_03350 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HC352_02310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_08850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_03270 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HC352_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HC352_04850 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HC352_08410 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HC352_03625 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HC352_06840 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HC352_08125 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HC352_02835 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HC352_02140 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HC352_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HC352_03650 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HC352_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HC352_03635 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HC352_08420 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:arca03036] D HC352_00920 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HC352_05260 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HC352_08675 hypothetical protein K07192 FLOT; flotillin D HC352_05750 integration host factor K03530 hupB; DNA-binding protein HU-beta D HC352_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HC352_07555 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D HC352_02770 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D HC352_04185 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D HC352_04180 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D HC352_06310 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HC352_03185 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HC352_03065 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HC352_03225 hypothetical protein K03589 ftsQ; cell division protein FtsQ D HC352_00490 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D HC352_03210 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D HC352_06305 ABC transporter permease K09811 ftsX; cell division transport system permease protein D HC352_03230 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HC352_03240 cell division protein SepF K09772 sepF; cell division inhibitor SepF D HC352_04190 ParA family protein K03496 parA; chromosome partitioning protein D HC352_08280 ParA family protein K03496 parA; chromosome partitioning protein D HC352_08910 ParA family protein K03496 parA; chromosome partitioning protein D HC352_08905 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HC352_08915 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HC352_02860 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D HC352_04195 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D HC352_08275 site-specific integrase K04763 xerD; integrase/recombinase XerD D HC352_06405 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D HC352_04225 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:arca03400] D HC352_01885 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D HC352_08055 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HC352_01315 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HC352_08490 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HC352_00905 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D HC352_00890 xth; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D HC352_06575 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D HC352_02140 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HC352_04245 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D HC352_04265 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D HC352_04240 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D HC352_01995 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HC352_06360 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HC352_06685 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HC352_07205 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HC352_07200 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HC352_06965 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HC352_04060 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HC352_07735 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HC352_07650 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HC352_07655 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HC352_03270 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HC352_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HC352_04850 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HC352_08410 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HC352_03625 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HC352_06840 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HC352_08125 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HC352_02310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_08850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_03090 recA; recombinase RecA K03553 recA; recombination protein RecA D HC352_03895 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HC352_03900 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HC352_03890 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HC352_04075 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D HC352_01535 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D HC352_01540 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D HC352_01335 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D HC352_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D HC352_05285 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HC352_08735 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HC352_04735 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HC352_08120 recR; recombination protein RecR K06187 recR; recombination protein RecR D HC352_04565 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D HC352_08685 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D HC352_04865 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D HC352_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HC352_03650 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HC352_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HC352_03635 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HC352_08420 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HC352_05750 integration host factor K03530 hupB; DNA-binding protein HU-beta D HC352_03160 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D HC352_03125 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D HC352_04435 hypothetical protein K14161 imuB; protein ImuB D HC352_03095 regulatory protein RecX K03565 recX; regulatory protein D HC352_03120 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D HC352_04540 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D HC352_00570 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HC352_00580 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:arca03029] D HC352_02980 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HC352_04710 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HC352_02875 elongation factor Ts K02357 tsf; elongation factor Ts D HC352_07175 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HC352_07180 fusA; elongation factor G K02355 fusA; elongation factor G D HC352_04740 GTPase Era K03595 era; GTPase D HC352_04630 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HC352_04875 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HC352_03970 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HC352_03305 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HC352_01715 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HC352_02155 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HC352_02160 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HC352_02150 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HC352_02310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_08850 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HC352_00805 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HC352_00810 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D HC352_08040 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HC352_06865 co-chaperone GroES K04078 groES; chaperonin GroES D HC352_00815 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ D HC352_04765 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D HC352_06405 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D HC352_08925 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:arca02000] D HC352_06150 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HC352_06145 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HC352_03420 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D HC352_03415 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D HC352_02740 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HC352_05240 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D HC352_05235 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D HC352_07800 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D HC352_06425 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D HC352_06430 modB; molybdate ABC transporter permease subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D HC352_05805 solute-binding protein K02011 afuB; iron(III) transport system permease protein D HC352_05800 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D HC352_00740 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D HC352_00745 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein D HC352_00750 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D HC352_05065 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D HC352_05060 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D HC352_04100 ABC transporter substrate-binding protein K24985 ribY; putative riboflavin transport system substrate-binding protein D HC352_04095 ABC transporter permease K24986 ribX; putative riboflavin transport system permease protein D HC352_08110 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D HC352_05220 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein D HC352_01850 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D HC352_01855 ABC transporter permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HC352_01860 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HC352_00770 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D HC352_00765 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein D HC352_00760 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein D HC352_03340 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein D HC352_03335 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D HC352_00115 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D HC352_00110 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HC352_00120 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HC352_06560 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D HC352_06550 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D HC352_06545 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D HC352_06555 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D HC352_00960 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D HC352_01560 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D HC352_02700 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D HC352_00965 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D HC352_01565 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D HC352_02710 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D HC352_00970 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D HC352_01570 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D HC352_02705 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D HC352_06110 autoinducer 2 ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D HC352_06095 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D HC352_06100 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D HC352_06105 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D HC352_06185 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D HC352_06180 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D HC352_06175 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D HC352_06170 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D HC352_05990 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein D HC352_05985 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D HC352_05980 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D HC352_04915 ABC transporter K02073 metQ; D-methionine transport system substrate-binding protein D HC352_04910 ABC transporter permease subunit K02072 metI; D-methionine transport system permease protein D HC352_04905 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D HC352_00615 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D HC352_00610 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D HC352_00605 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D HC352_07430 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D HC352_07445 ABC transporter permease K13890 gsiC; glutathione transport system permease protein D HC352_07440 ABC transporter permease K13891 gsiD; glutathione transport system permease protein D HC352_07435 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D HC352_00285 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HC352_00290 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HC352_04685 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HC352_00295 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HC352_04680 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HC352_00300 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HC352_04675 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D HC352_01665 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D HC352_01670 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D HC352_01675 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D HC352_07755 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D HC352_04475 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D HC352_07750 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D HC352_05955 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein D HC352_05945 metal ABC transporter permease K11602 mntB; manganese transport system permease protein D HC352_05950 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D HC352_03300 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D HC352_03290 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D HC352_03295 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D HC352_00705 zinc ABC transporter solute-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D HC352_00715 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D HC352_00720 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D HC352_00710 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D HC352_02400 anchored repeat-type ABC transporter permease subunit K09819 ABC.MN.P; manganese/iron transport system permease protein D HC352_02405 ABC transporter ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein D HC352_06215 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D HC352_05925 ECF-type riboflavin transporter substrate-binding protein K16924 mtsT; energy-coupling factor transport system substrate-specific component D HC352_06165 MptD family putative ECF transporter S component K16926 htsT; energy-coupling factor transport system substrate-specific component D HC352_05935 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D HC352_06160 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D HC352_05930 ATP-binding cassette domain-containing protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D HC352_06155 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D HC352_06305 ABC transporter permease K09811 ftsX; cell division transport system permease protein D HC352_06310 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HC352_00340 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HC352_07700 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein D HC352_07790 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HC352_07875 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HC352_00335 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HC352_02030 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HC352_05970 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HC352_07695 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HC352_07785 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HC352_07870 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HC352_01905 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D HC352_02120 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D HC352_02260 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D HC352_03020 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D HC352_04285 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D HC352_01900 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HC352_02080 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HC352_02125 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HC352_02255 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HC352_02620 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HC352_03015 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HC352_04290 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HC352_04515 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D HC352_04255 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D HC352_08725 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D HC352_08830 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HC352_00220 sugar porter family MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter D HC352_08540 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D HC352_05810 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D HC352_01325 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D HC352_01195 MFS transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein D HC352_07050 MFS transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein D HC352_08175 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D HC352_07020 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein D HC352_06700 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D HC352_07525 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HC352_07530 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HC352_07810 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HC352_07815 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D HC352_07515 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D HC352_05765 HPr family phosphocarrier protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D HC352_01285 aquaporin family protein K02440 glpF; glycerol uptake facilitator D HC352_07565 potassium channel family protein K10716 kch; voltage-gated potassium channel D HC352_02345 formate/nitrite transporter family protein K02598 nirC; nitrite transporter D HC352_07930 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D HC352_05020 CrcB family protein K06199 crcB; fluoride exporter D HC352_05025 CrcB family protein K06199 crcB; fluoride exporter D HC352_04610 DUF1211 domain-containing protein K24915 TMEM175; TMEM175 potassium channel family protein D HC352_01690 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D HC352_01695 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D HC352_04745 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D HC352_06120 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D HC352_01075 hypothetical protein K11939 rhtA; inner membrane transporter RhtA D HC352_01080 EamA family transporter K11939 rhtA; inner membrane transporter RhtA D HC352_00145 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D HC352_01165 TRAP transporter large permease subunit K07084 yuiF; putative amino acid transporter D HC352_00080 L-lactate permease K03303 lutP; lactate permease D HC352_04925 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D HC352_00055 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D HC352_02190 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D HC352_07710 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D HC352_04995 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump D HC352_02450 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D HC352_01345 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D HC352_08075 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D HC352_01340 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D HC352_03695 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D HC352_03700 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D HC352_08080 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D HC352_08220 purine/pyrimidine permease K24206 uacT; uric acid transporter D HC352_07970 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D HC352_05055 CBS domain-containing protein K03281 clcA; chloride channel protein, CIC family D HC352_05050 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D HC352_01035 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase D HC352_04545 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase D HC352_04895 AI-2E family transporter K20469 K20469; putative heme transporter D HC352_05775 AI-2E family transporter K20469 K20469; putative heme transporter D HC352_05845 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D HC352_04725 VIT family protein K22736 VIT; vacuolar iron transporter family protein D HC352_00490 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D HC352_03210 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D HC352_06485 molybdopterin-dependent oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D HC352_06480 dmsB; dimethylsulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D HC352_06010 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:arca02044] D HC352_06350 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HC352_08470 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HC352_06345 type II secretion system protein F K12510 tadB; tight adherence protein B D HC352_08465 hypothetical protein K12510 tadB; tight adherence protein B D HC352_06340 type II secretion system F family protein K12511 tadC; tight adherence protein C D HC352_08460 hypothetical protein K12511 tadC; tight adherence protein C D HC352_06335 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D HC352_03245 YggT family protein K02221 yggT; YggT family protein D HC352_04860 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA D HC352_04855 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC D HC352_01495 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HC352_03910 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HC352_07240 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HC352_03915 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HC352_04205 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HC352_07065 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HC352_02785 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HC352_02780 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HC352_03905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HC352_08925 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D HC352_06420 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D HC352_06495 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D HC352_06415 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:arca02042] D HC352_01690 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D HC352_01695 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D HC352_04745 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D HC352_00075 CAMP factor family pore-forming toxin K11045 cfa; cAMP factor D HC352_07670 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:arca02022] D HC352_06195 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D HC352_06190 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3 D HC352_07315 HAMP domain-containing protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D HC352_07320 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA D HC352_05820 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HC352_08010 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HC352_08005 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D HC352_07880 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HC352_07885 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR D HC352_05245 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D HC352_05250 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR D HC352_02110 PAS domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D HC352_04330 response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:arca02035] D HC352_05990 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein D HC352_06335 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D HC352_06350 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HC352_08470 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:arca04812] D HC352_03230 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HC352_04190 ParA family protein K03496 parA; chromosome partitioning protein D HC352_08280 ParA family protein K03496 parA; chromosome partitioning protein D HC352_08910 ParA family protein K03496 parA; chromosome partitioning protein D HC352_08905 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:arca04147] D HC352_07730 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HC352_04220 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HC352_04215 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HC352_04340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HC352_00460 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D HC352_08675 hypothetical protein K07192 FLOT; flotillin D HC352_08040 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HC352_00805 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HC352_06640 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HC352_06835 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HC352_06855 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HC352_07175 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HC352_04880 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HC352_07490 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HC352_04255 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D HC352_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D HC352_03140 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D HC352_07060 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HC352_03920 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HC352_02470 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HC352_02465 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HC352_00310 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D HC352_06015 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HC352_01865 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D HC352_01280 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D HC352_03490 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_03505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HC352_03750 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HC352_03525 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HC352_02885 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D HC352_07000 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D HC352_04210 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HC352_08195 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:arca02048] D HC352_08685 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D HC352_08690 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D HC352_08680 HNH endonuclease K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D HC352_07605 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D HC352_07600 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D HC352_07590 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D HC352_00920 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HC352_02520 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D HC352_05905 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D HC352_08755 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D HC352_01975 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein D HC352_01980 type II toxin-antitoxin system prevent-host-death family antitoxin K19165 phd; antitoxin Phd D HC352_03230 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HC352_00850 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HC352_05380 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HC352_06725 nucleotidyl transferase AbiEii/AbiGii toxin family protein K28188 tglT; guanylyltransferase TglT toxin C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:arca01504] D HC352_04995 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump D HC352_06355 phosphotransferase K06979 mph; macrolide phosphotransferase D HC352_01325 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:arca03100] D HC352_00045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HC352_05140 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HC352_05150 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HC352_01710 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HC352_02295 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HC352_07950 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HC352_08730 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HC352_03380 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HC352_01040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HC352_01050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HC352_03820 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HC352_05375 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HC352_07775 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HC352_01055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HC352_05365 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HC352_05370 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HC352_02605 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HC352_02660 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HC352_03815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HC352_03830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HC352_02285 tRNA-His K14226 tRNA-His; tRNA His D HC352_00040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HC352_00510 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HC352_04335 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HC352_04410 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HC352_05670 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HC352_07705 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HC352_01085 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HC352_02265 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HC352_02270 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HC352_02040 tRNA-Met K14230 tRNA-Met; tRNA Met D HC352_03355 tRNA-Ile K14230 tRNA-Met; tRNA Met D HC352_07275 tRNA-Met K14230 tRNA-Met; tRNA Met D HC352_01045 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HC352_02665 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HC352_04155 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HC352_08520 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HC352_08135 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HC352_08590 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HC352_08645 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HC352_08650 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HC352_07280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HC352_08095 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HC352_08400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HC352_07245 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HC352_07285 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HC352_03435 tRNA-Val K14237 tRNA-Val; tRNA Val D HC352_03810 tRNA-Val K14237 tRNA-Val; tRNA Val D HC352_03825 tRNA-Val K14237 tRNA-Val; tRNA Val D HC352_03835 tRNA-Val K14237 tRNA-Val; tRNA Val D HC352_02170 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_04605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_07545 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_08235 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HC352_02175 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_04600 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_07540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_08230 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HC352_02180 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HC352_04595 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HC352_07535 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HC352_08225 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D HC352_08815 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D HC352_07040 caiA; crotonobetainyl-CoA dehydrogenase K08297 caiA; crotonobetainyl-CoA dehydrogenase [EC:1.3.8.13] D HC352_01415 geranylgeranyl reductase family protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D HC352_02890 FAD-dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D HC352_06995 FAD-dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D HC352_06845 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D HC352_07680 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D HC352_01065 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D HC352_05675 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HC352_06850 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D HC352_05795 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D HC352_07295 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D HC352_06210 heat-shock protein HtpX K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D HC352_02230 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HC352_08430 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HC352_06595 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D HC352_04125 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D HC352_08705 gnpA; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211] D HC352_04345 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D HC352_08700 aminoglycoside phosphotransferase family protein K13059 nahK; N-acetylhexosamine 1-kinase [EC:2.7.1.162] D HC352_03495 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D HC352_07035 caiB; L-carnitine CoA-transferase K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21] D HC352_00535 Appr-1-p processing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D HC352_05155 histidine phosphatase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D HC352_06385 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D HC352_04490 phosphoglycerate mutase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D HC352_07835 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D HC352_01805 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-] D HC352_06920 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D HC352_07685 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D HC352_00190 AGE family epimerase/isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D HC352_07030 AMP-binding protein K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48] D HC352_00790 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12] D HC352_08565 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism D HC352_00085 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D HC352_00090 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D HC352_00095 lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D HC352_04505 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins D HC352_02880 electron transfer flavoprotein beta subunit/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D HC352_07005 electron transfer flavoprotein beta subunit/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D HC352_02895 ferredoxin K03855 fixX; ferredoxin like protein D HC352_06990 ferredoxin K03855 fixX; ferredoxin like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism D HC352_00565 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D HC352_02240 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D HC352_07830 DUF348 domain-containing protein K21688 rpfB; resuscitation-promoting factor RpfB D HC352_00380 glycosyltransferase family 2 protein K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase C 99987 Cofactor metabolism C 99988 Secondary metabolism D HC352_07550 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D HC352_02500 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D HC352_07985 cold-shock protein K03704 cspA; cold shock protein D HC352_05630 phage antirepressor Ant K07741 antB; anti-repressor protein C 99974 Translation C 99975 Protein processing D HC352_05730 ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D HC352_02670 trigger factor K03545 tig; trigger factor D HC352_06295 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D HC352_00560 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D HC352_02850 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D HC352_07640 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D HC352_02490 deoxyribonuclease K07457 K07457; endonuclease III related protein D HC352_02845 YraN family protein K07460 yraN; putative endonuclease D HC352_04380 PD-(D/E)XK nuclease family protein K07465 K07465; putative RecB family exonuclease D HC352_02855 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D HC352_03990 replication-associated recombination protein A K07478 ycaJ; putative ATPase D HC352_05575 DNA primase K06919 K06919; putative DNA primase/helicase D HC352_05090 IS30 family transposase K07482 K07482; transposase, IS30 family D HC352_02045 transposase K07485 K07485; transposase D HC352_05335 transposase K07485 K07485; transposase D HC352_05355 transposase K07485 K07485; transposase D HC352_05360 ISL3 family transposase K07485 K07485; transposase D HC352_02560 IS110 family transposase K07486 K07486; transposase D HC352_06745 transposase family protein K07497 K07497; putative transposase D HC352_06755 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D HC352_07995 PspA/IM30 family protein K03969 pspA; phage shock protein A D HC352_07560 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D HC352_00870 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D HC352_01105 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D HC352_07615 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D HC352_01115 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HC352_08085 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HC352_06000 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D HC352_06005 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D HC352_08215 allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D HC352_02205 transporter K07085 K07085; putative transport protein D HC352_05755 transporter K07085 K07085; putative transport protein C 99978 Cell growth D HC352_08920 KH domain-containing protein K06346 jag; spoIIIJ-associated protein D HC352_05130 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D HC352_01955 hypothetical protein K06407 spoVAE; stage V sporulation protein AE C 99993 Cell motility C 99995 Signaling proteins D HC352_07410 typA; translational GTPase TypA K06207 typA; GTP-binding protein D HC352_04755 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D HC352_07290 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D HC352_08865 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA D HC352_00385 DUF2304 domain-containing protein K09153 K09153; small membrane protein C 99994 Others D HC352_06200 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D HC352_00315 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein B B 09194 Poorly characterized C 99996 General function prediction only D HC352_08440 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein D HC352_03985 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D HC352_07850 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D HC352_08765 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D HC352_04530 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D HC352_04525 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D HC352_06570 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D HC352_07945 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D HC352_00070 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein D HC352_00680 phage holin family protein K08972 K08972; putative membrane protein D HC352_01255 PH domain-containing protein K08981 K08981; putative membrane protein D HC352_06620 hypothetical protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D HC352_08000 nuclease K06860 K06860; putative heme uptake system protein D HC352_05700 SnoaL-like domain-containing protein K06893 K06893; uncharacterized protein D HC352_05940 HD domain-containing protein K06950 K06950; uncharacterized protein D HC352_02810 RNA-binding protein K06960 K06960; uncharacterized protein D HC352_05790 N-acetyltransferase K06975 K06975; uncharacterized protein D HC352_02950 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein D HC352_00835 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein D HC352_00205 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D HC352_03840 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D HC352_08515 metallophosphoesterase K07098 K07098; uncharacterized protein D HC352_00700 phosphoribosyltransferase K07101 K07101; uncharacterized protein D HC352_00895 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein D HC352_08020 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein D HC352_03460 hypothetical protein K07164 K07164; uncharacterized protein D HC352_08930 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D HC352_07865 hypothetical protein K09004 K09004; uncharacterized protein D HC352_02020 UPF0182 family protein K09118 K09118; uncharacterized protein D HC352_01250 PH domain-containing protein K09167 K09167; uncharacterized protein D HC352_04250 hypothetical protein K09780 K09780; uncharacterized protein D HC352_03465 peroxide stress protein YaaA K09861 K09861; uncharacterized protein D HC352_05120 winged helix-turn-helix domain-containing protein K09927 K09927; uncharacterized protein D HC352_07505 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein D HC352_01110 DUF47 family protein K07220 K07220; uncharacterized protein D HC352_02975 YlxR family protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2025