+F Repair protein KO #

  DNA Repair and Recombination Proteins - Acinetobacter schindleri

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D AsACE_CH00628 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D AsACE_CH00159 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E AsACE_CH01713 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E AsACE_CH02822 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E AsACE_CH00864 nth; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D AsACE_CH02519 NUDIX hydrolase domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AsACE_CH01835 MutT/NUDIX hydrolase domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AsACE_CH00686 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D AsACE_CH00628 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D AsACE_CH00159 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D AsACE_p100146 deoxyribodipyrimidine photo-lyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] C BER (base exicision repair) D DNA glycosylases E AsACE_CH01713 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E AsACE_CH02822 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E AsACE_CH02825 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E AsACE_CH02235 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E AsACE_CH00864 nth; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E AsACE_CH00119 exodeoxyribonuclease III protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RecJ E AsACE_CH00147 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E AsACE_CH00642 ligA; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E AsACE_CH00584 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E AsACE_CH00173 uvrA-1; excinuclease ABC subunit A 1 K03701 uvrA; excinuclease ABC subunit A E AsACE_p100155 uvrA-2; excinuclease ABC subunit A 2 K03701 uvrA; excinuclease ABC subunit A E AsACE_CH00983 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B E AsACE_CH00220 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C E AsACE_CH00399 DNA helicase UvrD-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E AsACE_CH00584 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] E AsACE_CH00642 ligA; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F AsACE_CH00251 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F AsACE_CH00252 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F AsACE_CH02477 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F AsACE_CH02581 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F AsACE_CH01249 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors E AsACE_CH01176 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Molecular matchmaker E AsACE_CH01737 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases E AsACE_CH01623 exodeoxyribonuclease 7 large subunit protein K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] E AsACE_CH01624 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] E AsACE_CH01856 ribonuclease H-like domain-containing protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D DNA polymerase III holoenzyme E AsACE_CH01182 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E AsACE_CH00001 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E AsACE_CH02682 DNA polymerase III chi subunit HolC protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] E AsACE_CH00502 DNA polymerase III delta subunit protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E AsACE_CH01722 DNA polymerase III delta' subunit protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E AsACE_CH00894 bifunctional ribonuclease HI/DNA polymerase III subunit epsilon protein K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] E AsACE_CH01674 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E AsACE_CH00642 ligA; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E AsACE_CH00399 DNA helicase UvrD-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E AsACE_CH00716 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein E AsACE_CH00177 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein E AsACE_CH01867 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E AsACE_CH00285 exodeoxyribonuclease V beta subunit protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] E AsACE_CH00284 exodeoxyribonuclease V gamma subunit protein K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] E AsACE_CH00286 exodeoxyribonuclease V alpha subunit protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] E AsACE_CH01218 recA; recombinase A K03553 recA; recombination protein RecA E AsACE_CH01937 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E AsACE_CH01938 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E AsACE_CH01760 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] E AsACE_CH00295 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] E AsACE_CH00699 ATP-dependent dsDNA exonuclease subunit SbcC protein K03546 sbcC; DNA repair protein SbcC/Rad50 E AsACE_CH00700 DNA repair exonuclease SbcD protein K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E AsACE_CH01218 recA; recombinase A K03553 recA; recombination protein RecA E AsACE_CH01992 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms E AsACE_CH00002 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF E AsACE_CH02517 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E AsACE_CH02383 ATP-dependent DNA helicase domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E AsACE_CH00147 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E AsACE_CH01896 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) E AsACE_CH01582 recR; recombination protein RecR K06187 recR; recombination protein RecR E AsACE_CH02649 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) E AsACE_CH01937 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E AsACE_CH01938 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E AsACE_CH01760 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins E AsACE_CH00699 ATP-dependent dsDNA exonuclease subunit SbcC protein K03546 sbcC; DNA repair protein SbcC/Rad50 E AsACE_CH00700 DNA repair exonuclease SbcD protein K03547 sbcD; DNA repair protein SbcD/Mre11 E AsACE_CH02506 nucleotide triphosphate hydrolase protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F AsACE_CH01978 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F AsACE_CH00003 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F AsACE_CH00395 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F AsACE_CH01261 DNA-binding HU-like protein K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F AsACE_CH00147 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F AsACE_CH01896 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) F AsACE_CH01582 recR; recombination protein RecR K06187 recR; recombination protein RecR F AsACE_CH00642 ligA; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator F AsACE_CH01190 HTH DNA-binding domain-containing protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein F AsACE_CH00575 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha F AsACE_CH01707 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta E Supressor F AsACE_CH00173 uvrA-1; excinuclease ABC subunit A 1 K03701 uvrA; excinuclease ABC subunit A F AsACE_p100155 uvrA-2; excinuclease ABC subunit A 2 K03701 uvrA; excinuclease ABC subunit A F AsACE_CH00983 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B F AsACE_CH00232 H-NS histone family protein K03746 hns; DNA-binding protein H-NS B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D AsACE_CH02710 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] C Other SOS response factors D AsACE_CH01218 recA; recombinase A K03553 recA; recombination protein RecA D AsACE_CH02649 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D AsACE_CH00716 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AsACE_CH00177 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D AsACE_CH01867 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AsACE_CH01217 recX; DNA repair regulator protein RecX K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases D AsACE_CH00685 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] C Modulation of nucleotide pools D AsACE_CH02519 NUDIX hydrolase domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AsACE_CH01835 MutT/NUDIX hydrolase domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AsACE_CH00686 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AsACE_CH02200 nrdA; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AsACE_CH02201 nrdB; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2024