+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Alligator sinensis (Chinese alligator)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 102387848 RNMT; mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 102376947 RNGTT; mRNA-capping enzyme isoform X2 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 102380983 CDK7; cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 102369625 CMTR1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 isoform X1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 102379025 CMTR2; LOW QUALITY PROTEIN: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 102386944 RAMMET; RNMT-activating mini protein K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 102374216 NCBP1; LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 102388601 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 102375525 NUDT21; cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 102379529 CPSF7; cleavage and polyadenylation specificity factor subunit 7 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 102385283 CPSF6; cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 102384463 CLP1; polyribonucleotide 5'-hydroxyl-kinase Clp1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 102384070 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 102374538 CPSF1; cleavage and polyadenylation specificity factor subunit 1 isoform X3 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 102375396 CPSF2; cleavage and polyadenylation specificity factor subunit 2 isoform X1 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 102371539 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 102385045 CPSF4L; putative cleavage and polyadenylation specificity factor subunit 4-like protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 102384592 CPSF4; cleavage and polyadenylation specificity factor subunit 4 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 102384013 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 102387873 pre-mRNA 3'-end-processing factor FIP1-like K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 102373362 WDR33; pre-mRNA 3' end processing protein WDR33 isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 102380338 WDR82; WD repeat-containing protein 82 isoform X2 K14962 WDR82; COMPASS component SWD2
E 102375415 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102373171 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102383008 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102369802 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 102379407 CSTF1; cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 102377980 CSTF2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 102382429 CSTF3; cleavage stimulation factor subunit 3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 102376053 SYMPK; LOW QUALITY PROTEIN: symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 102372925 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' isoform X1 K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 102380549 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 106723101 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 102384542 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 102379712 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 102367971 LSM11; U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 102375396 CPSF2; cleavage and polyadenylation specificity factor subunit 2 isoform X1 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 102371539 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 102377980 CSTF2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 102376053 SYMPK; LOW QUALITY PROTEIN: symplekin K06100 SYMPK; symplekin
E 102384143 histone RNA hairpin-binding protein-like K18710 SLBP; histone RNA hairpin-binding protein
E 102374062 LOW QUALITY PROTEIN: histone RNA hairpin-binding protein-like K18710 SLBP; histone RNA hairpin-binding protein
E 102369556 histone RNA hairpin-binding protein-like isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
E 102387507 CASP8AP2; CASP8-associated protein 2 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 102379392 SUPT4H1; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 102386452 SUPT5H; transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 102379144 METTL3; N6-adenosine-methyltransferase catalytic subunit K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 102382866 METTL14; N6-adenosine-methyltransferase non-catalytic subunit isoform X1 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 102377992 METTL4; methyltransferase-like protein 4 isoform X2 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 102379059 METTL16; U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 102379347 WTAP; pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 102374551 VIRMA; protein virilizer homolog isoform X3 K22910 VIRMA; protein virilizer
E 102388850 RBM15; putative RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
E 102379135 RBM15B; putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 102378087 ZC3H13; LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 13 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 102379440 CBLL1; E3 ubiquitin-protein ligase Hakai isoform X3 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 102381889 PAPOLA; poly(A) polymerase alpha K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 102373529 PAPOLG; poly(A) polymerase gamma isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 102379345 TENT2; poly(A) RNA polymerase GLD2 isoform X1 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 102374594 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 102385658 BARD1; BRCA1-associated RING domain protein 1 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 102377747 RBM26; RNA-binding protein 26 isoform X2 K13192 RBM26; RNA-binding protein 26
E 102372311 FTO; alpha-ketoglutarate-dependent dioxygenase FTO isoform X3 K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 102371901 ALKBH5; RNA demethylase ALKBH5 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 102371002 TARDBP; TAR DNA-binding protein 43 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 102386389 DHX40; probable ATP-dependent RNA helicase DHX40 isoform X1 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 102386887 KIN; DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17
D 102368681 METTL8; LOW QUALITY PROTEIN: methyltransferase-like protein 8 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 102372015 METTL22; methyltransferase-like protein 22 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 102382637 TENT5A; putative nucleotidyltransferase FAM46A K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 102379902 TENT5B; putative nucleotidyltransferase FAM46B K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 102375824 TENT5C; putative nucleotidyltransferase FAM46C K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 102376045 TENT5D; putative nucleotidyltransferase FAM46D K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 102383390 ZC3H14; zinc finger CCCH domain-containing protein 14 isoform X2 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 102374832 SRRT; serrate RNA effector molecule homolog K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 102384545 RBM8A; RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A
E 102370798 MAGOH; protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 102383182 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 102378570 DDX39B; spliceosome RNA helicase DDX39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 102385527 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 102388573 CCDC174; coiled-coil domain-containing protein 174 isoform X1 K25178 CCDC174; coiled-coil domain-containing protein 174
E 102379835 CASC3; protein CASC3 K14323 CASC3; protein CASC3
E 102388823 SAP18; histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 102378096 PNN; LOW QUALITY PROTEIN: pinin K13114 PNN; pinin
E 102381515 ACIN1; LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 102372769 RNPS1; RNA-binding protein with serine-rich domain 1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 102379339 SRRM1; serine/arginine repetitive matrix protein 1 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 102377036 THOC1; THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 102375147 THOC2; THO complex subunit 2 isoform X3 K12879 THOC2; THO complex subunit 2
E 102388155 THOC3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 102383182 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 102388817 THOC5; THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5
E 102368095 THOC6; THO complex subunit 6 homolog isoform X1 K13175 THOC6; THO complex subunit 6
E 102375439 THOC7; THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 102371102 PCID2; PCI domain-containing protein 2 isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 102369921 SEM1; 26S proteasome complex subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 102382590 ENY2; transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 102384712 centrin-2 K10840 CETN2; centrin-2
E 102384968 centrin-1-like K10840 CETN2; centrin-2
E 102379352 CETN3; centrin-3 isoform X2 K16466 CETN3; centrin-3
E 102372720 MCM3AP; germinal-center associated nuclear protein K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 102370070 TPR; nucleoprotein TPR isoform X1 K09291 TPR; nucleoprotein TPR
E 102382389 RAE1; mRNA export factor isoform X1 K14298 RAE1; mRNA export factor
E 102378054 SEC13; protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 102373550 NUP37; nucleoporin Nup37 isoform X1 K14302 NUP37; nuclear pore complex protein Nup37
E 102375430 NUP85; nuclear pore complex protein Nup85 isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 102382749 NUP43; nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 102374426 NUP50; nuclear pore complex protein Nup50 isoform X1 K14295 NUP50; nuclear pore complex protein Nup50
E 102375574 NUP54; nucleoporin p54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54
E 102382199 NUP62CL; nucleoporin-62 C-terminal-like protein K14306 NUP62; nuclear pore complex protein Nup62
E 102374912 NUP88; LOW QUALITY PROTEIN: nuclear pore complex protein Nup88 K14318 NUP88; nuclear pore complex protein Nup88
E 102378973 NUP93; nuclear pore complex protein Nup93 isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 102376484 NUP98; nuclear pore complex protein Nup98-Nup96 isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 102382399 NUP107; nuclear pore complex protein Nup107 isoform X2 K14301 NUP107; nuclear pore complex protein Nup107
E 102370935 NUP133; nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 102382564 NUP188; nucleoporin NUP188 homolog isoform X8 K14311 NUP188; nuclear pore complex protein Nup188
E 102384036 NUP153; nuclear pore complex protein Nup153 K14296 NUP153; nuclear pore complex protein Nup153
E 102387498 NUP155; nuclear pore complex protein Nup155 K14312 NUP155; nuclear pore complex protein Nup155
E 102381189 NUP160; nuclear pore complex protein Nup160 K14303 NUP160; nuclear pore complex protein Nup160
E 102383540 NUP35; nucleoporin NUP35 K14313 NUP35; nuclear pore complex protein Nup53
E 102372468 NUP205; LOW QUALITY PROTEIN: nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205
E 102375609 NUP210; nuclear pore membrane glycoprotein 210 isoform X1 K14314 NUP210; nuclear pore complex protein Nup210
E 102379787 NUP210L; nuclear pore membrane glycoprotein 210-like K14314 NUP210; nuclear pore complex protein Nup210
E 102375132 LOW QUALITY PROTEIN: nuclear pore complex protein Nup214 K14317 NUP214; nuclear pore complex protein Nup214
E 102376311 nuclear envelope pore membrane protein POM 121C isoform X2 K14316 POM121; nuclear pore complex protein Nup121
E 102387318 NUP58; nucleoporin p58/p45 K14307 NUPL1; nucleoporin p58/p45
E 102369788 NUPL2; nucleoporin-like protein 2 K14321 NUPL2; nucleoporin-like protein 2
E 102371908 NDC1; nucleoporin NDC1 K14315 NDC1; nucleoporin NDC1
E 102369821 SEH1L; nucleoporin SEH1 K14299 SEH1; nucleoporin SEH1
E 106721793 E3 SUMO-protein ligase RanBP2 isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 102380630 SENP2; sentrin-specific protease 2 isoform X5 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 112551423 sentrin-specific protease 2-like K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 102370809 AAAS; aladin isoform X1 K14320 AAAS; aladin
E 102379352 CETN3; centrin-3 isoform X2 K16466 CETN3; centrin-3
E 102378218 nucleoporin GLE1 isoform X9 K18723 GLE1; nucleoporin GLE1
E 102374093 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 102379715 NXT2; NTF2-related export protein 2 isoform X2 K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 102370450 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 102378649 ANP32A; acidic leucine-rich nuclear phosphoprotein 32 family member A K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 102379971 acidic leucine-rich nuclear phosphoprotein 32 family member B isoform X1 K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 102376004 tumor necrosis factor ligand superfamily member 13-like isoform X6 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 102379279 ELAVL1; ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 102369995 ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 102382682 ELAVL2; ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 102379431 ELAVL3; LOW QUALITY PROTEIN: ELAV-like protein 3 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 102384001 FAF2; FAS-associated factor 2 isoform X3 K18726 FAF2; FAS-associated factor 2
E 102369218 VCP; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
E 102386922 VCPKMT; protein-lysine methyltransferase METTL21D K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 102378131 TNPO2; transportin-2 K18727 TNPO2; transportin-2
E 102370119 XPO1; exportin-1 isoform X1 K14290 XPO1; exportin-1
E 102380556 XPO7; exportin-7 isoform X2 K18460 XPO7; exportin-7
E 102375096 RANBP17; ran-binding protein 17 isoform X3 K24115 RANBP17; Ran-binding protein 17
E 102371399 RANGAP1; ran GTPase-activating protein 1 isoform X1 K14319 RANGAP1; Ran GTPase-activating protein 1
E 102376251 TATA-binding protein-associated factor 2N isoform X1 K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E 102385107 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 102375341 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 102386145 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 102382610 EIF4A2; eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 102368168 EIF4A1; eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 102387932 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X3 K03260 EIF4G; translation initiation factor 4G
E 102379744 EIF4G1; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1 K03260 EIF4G; translation initiation factor 4G
E 102382786 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 102375389 EIF4B; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4B K03258 EIF4B; translation initiation factor 4B
E 102372740 EIF4H; eukaryotic translation initiation factor 4H K24086 EIF4H; translation initiation factor 4H
E 102370402 EIF4EBP2; eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 102387299 EIF4EBP3; eukaryotic translation initiation factor 4E-binding protein 3 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 102374550 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 102382408 ANGEL2; protein angel homolog 2 K18729 ANGEL; protein angel
E 102384076 ANGEL1; protein angel homolog 1 K18729 ANGEL; protein angel
E 102373895 FMR1; synaptic functional regulator FMR1 K15516 FMR; fragile X mental retardation protein
E 102368657 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 102385737 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X3 K15516 FMR; fragile X mental retardation protein
E 102374475 CYFIP2; cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102388374 cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102385086 CYFIP1; LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102386502 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 102370629 TACC3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 102388221 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102368538 CPEB4; cytoplasmic polyadenylation element-binding protein 4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102375879 CPEB3; cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102380227 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102370357 DDX3X; ATP-dependent RNA helicase DDX3X isoform X3 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102370205 GIGYF2; LOW QUALITY PROTEIN: GRB10-interacting GYF protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 102376047 GIGYF1; GRB10-interacting GYF protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 102373528 PABPC1L; polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 102386577 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 102380833 PABPC1; polyadenylate-binding protein 1 isoform X2 K13126 PABPC; polyadenylate-binding protein
E 102387190 PAIP1; polyadenylate-binding protein-interacting protein 1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 102369001 PAIP2; polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 102388373 PAIP2B; polyadenylate-binding protein-interacting protein 2B isoform X1 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 102380776 SKIV2L; LOW QUALITY PROTEIN: helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 102382715 DEAF1; deformed epidermal autoregulatory factor 1 homolog isoform X1 K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 102377585 MCTS1; malignant T-cell-amplified sequence 1 K07575 MCTS; malignant T-cell-amplified sequence
E 102377225 DENR; density-regulated protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 102372754 C->U-editing enzyme APOBEC-1-like isoform X2 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 102373005 C->U-editing enzyme APOBEC-1-like K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 102381995 C->U-editing enzyme APOBEC-1-like K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 102386254 A1CF; APOBEC1 complementation factor isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 102375572 PYM1; partner of Y14 and mago K14294 WIBG; partner of Y14 and mago
E 102383156 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102386385 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102372357 MSI2; RNA-binding protein Musashi homolog 2 isoform X5 K14411 MSI; RNA-binding protein Musashi
E 102388333 MSI1; RNA-binding protein Musashi homolog 1 K14411 MSI; RNA-binding protein Musashi
E 102385408 DAZAP1; DAZ-associated protein 1 isoform X3 K14411 MSI; RNA-binding protein Musashi
E 102369845 HBS1L; HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein
E 102378345 PELO; protein pelota homolog K06965 PELO; protein pelota
E 102376381 PABPN1L; embryonic polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 102382268 polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 102372492 LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX19B K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 102388638 DDX25; ATP-dependent RNA helicase DDX25 K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
E 102379719 XAB2; pre-mRNA-splicing factor SYF1 isoform X2 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 102386545 SARNP; SAP domain-containing ribonucleoprotein isoform X1 K18732 SARNP; SAP domain-containing ribonucleoprotein
E 102374504 RCC1; regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation
E 102381222 LARP6; la-related protein 6 K18733 LARP6; la-related protein 6
E 102377241 la-related protein 6-like K18733 LARP6; la-related protein 6
E 102387888 PURA; transcriptional activator protein Pur-alpha K21772 PURA; transcriptional activator protein Pur-alpha
E 102382900 PURB; transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 102368238 POLDIP3; polymerase delta-interacting protein 3 isoform X1 K22414 POLDIP3; polymerase delta-interacting protein 3
E 102376505 ZC3H11A; zinc finger CCCH domain-containing protein 11A isoform X3 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 102380949 LENG8; leukocyte receptor cluster member 8 isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
E 102375931 PATL2; protein PAT1 homolog 2 isoform X1 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 102370591 ETF1; eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1
E 102377650 GSPT1; eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3
E 102384608 UPF1; LOW QUALITY PROTEIN: regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 102373885 UPF2; regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 102377674 UPF3A; regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 102376629 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 102386870 PPP2CB; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 102387234 PPP2CA; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 102376404 PPP2R1A; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 102374906 PPP2R2B; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102385445 PPP2R2A; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102380791 PPP2R2C; protein phosphatase 2, regulatory subunit B, gamma isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102380229 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X2 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102381768 PPP2R3C; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 102381780 PPP2R3B; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 102379233 PPP2R3A; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 102378114 PPP2R5C; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X2 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102372040 PPP2R5E; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X4 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102387457 PPP2R5A; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102379302 PPP2R5B; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102381325 PPP2R5D; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 102382911 SMG1; serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 102378429 SMG5; protein SMG5 isoform X1 K11125 SMG5; protein SMG5
E 102380384 SMG6; telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 102385679 SMG7; LOW QUALITY PROTEIN: protein SMG7 K14409 SMG7; protein SMG7
E 102382108 SMG8; LOW QUALITY PROTEIN: protein SMG8 K18734 SMG8; protein SMG8
E 102374437 SMG9; LOW QUALITY PROTEIN: protein SMG9 K18735 SMG9; protein SMG9
E 102370205 GIGYF2; LOW QUALITY PROTEIN: GRB10-interacting GYF protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 102376047 GIGYF1; GRB10-interacting GYF protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 102373386 SECISBP2; selenocysteine insertion sequence-binding protein 2 isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 102383060 SECISBP2L; selenocysteine insertion sequence-binding protein 2-like isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 102371994 DHX34; LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 102372827 GTPBP1; GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 102375216 PUM3; LOW QUALITY PROTEIN: pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6
E 102376880 unconventional myosin-Vb-like isoform X1 K10357 MYO5; myosin V
E 102375640 unconventional myosin-Vb K10357 MYO5; myosin V
E 102368182 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 102382119 MYO5A; unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 102374208 BICD2; protein bicaudal D homolog 2 isoform X1 K18739 BICD; protein bicaudal D
E 102379031 BICD1; protein bicaudal D homolog 1 isoform X1 K18739 BICD; protein bicaudal D
E 102380643 EXD1; piRNA biogenesis protein EXD1 isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 102386754 ACTB; actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 102368398 ACTG1; actin, cytoplasmic 2 isoform X1 K05692 ACTB_G1; actin beta/gamma 1
E 102380881 actin, cytoplasmic type 5 K05692 ACTB_G1; actin beta/gamma 1
E 102370707 actin, cytoplasmic type 5-like K05692 ACTB_G1; actin beta/gamma 1
E 102386355 MBP; myelin basic protein isoform X1 K17269 MBP; myelin basic protein
E 102376493 VIM; vimentin K07606 VIM; vimentin
E 102370393 MYC; myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein
E 102375970 GDF1; embryonic growth/differentiation factor 1 K05495 GDF1; growth differentiation factor 1
E 102371967 T-box-containing protein TBX6L K10180 TBX6; T-box protein 6
E 102372216 T-box transcription factor TBX6-like K10180 TBX6; T-box protein 6
E 102388674 NANOS1; nanos homolog 1 K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 102382879 ZBP1; Z-DNA-binding protein 1 isoform X1 K12965 ZBP1; Z-DNA binding protein 1
E 102387595 FUBP3; far upstream element-binding protein 3 isoform X1 K13210 FUBP; far upstream element-binding protein
E 102371303 KHSRP; far upstream element-binding protein 2 isoform X2 K13210 FUBP; far upstream element-binding protein
E 102370786 FUBP1; far upstream element-binding protein 1 isoform X3 K13210 FUBP; far upstream element-binding protein
E 102387838 EEF1A1; elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 102375530 EEF1A2; elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 102384014 elongation factor 1-alpha, oocyte form-like K03231 EEF1A; elongation factor 1-alpha
E 102370149 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 102386209 EEF1G; elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 102372733 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 102371674 HAX1; HCLS1-associated protein X-1 K16220 HAX1; HCLS1-associated protein X-1
E 102374884 AGFG1; arf-GAP domain and FG repeat-containing protein 1 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 102382697 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X3 K17597 STAU; double-stranded RNA-binding protein Staufen
E 102385074 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 102386267 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 102381697 PTBP1; polypyrimidine tract-binding protein 1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 102388221 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102368538 CPEB4; cytoplasmic polyadenylation element-binding protein 4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102375879 CPEB3; cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102380227 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 102373895 FMR1; synaptic functional regulator FMR1 K15516 FMR; fragile X mental retardation protein
E 102368657 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 102385737 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X3 K15516 FMR; fragile X mental retardation protein
E 102374475 CYFIP2; cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102388374 cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102385086 CYFIP1; LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102368383 PCBP2; poly(rC)-binding protein 2 isoform X2 K13162 PCBP2; poly(rC)-binding protein 2
E 102369805 poly(rC)-binding protein 3-like isoform X2 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102377175 PCBP3; poly(rC)-binding protein 3 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102383807 PCBP4; poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102383658 CAPRIN1; caprin-1 isoform X1 K18743 CAPRIN1; caprin-1
E 102374163 CAPRIN2; caprin-2 isoform X3 K18744 CAPRIN2; caprin-2
E 102379040 B box-binding protein-like K09276 YBX1; Y-box-binding protein 1
E 102375052 YBX1; LOW QUALITY PROTEIN: nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 102380424 XRN1; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 102373576 AGO4; protein argonaute-4 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102373826 protein argonaute-1 isoform X8 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102376504 AGO2; LOW QUALITY PROTEIN: protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102374066 AGO3; protein argonaute-3 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102385107 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 102375341 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 102386145 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 102384608 UPF1; LOW QUALITY PROTEIN: regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 102370357 DDX3X; ATP-dependent RNA helicase DDX3X isoform X3 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102386068 DDX6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 102376624 MEX3D; RNA-binding protein MEX3D K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 102370664 MEX3A; LOW QUALITY PROTEIN: RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 102375891 MEX3C; RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 102386280 MEX3B; RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 102382446 FASTK; LOW QUALITY PROTEIN: fas-activated serine/threonine kinase K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 102379773 LSM14B; protein LSM14 homolog B isoform X1 K18749 LSM14; protein LSM14
E 102386935 LSM14A; protein LSM14 homolog A K18749 LSM14; protein LSM14
E 102368383 PCBP2; poly(rC)-binding protein 2 isoform X2 K13162 PCBP2; poly(rC)-binding protein 2
E 102379040 B box-binding protein-like K09276 YBX1; Y-box-binding protein 1
E 102375052 YBX1; LOW QUALITY PROTEIN: nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 102388177 LIMD1; LIM domain-containing protein 1 K16682 AJUBA; LIM domain-containing protein
E 102382890 WTIP; Wilms tumor protein 1-interacting protein K16682 AJUBA; LIM domain-containing protein
E 102372754 C->U-editing enzyme APOBEC-1-like isoform X2 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 102373005 C->U-editing enzyme APOBEC-1-like K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 102381995 C->U-editing enzyme APOBEC-1-like K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 102375483 MOV10; putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 102382795 PNRC2; proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 102374234 TNPO1; transportin-1 K18752 TNPO1; transportin-1
E 102382911 SMG1; serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 102378429 SMG5; protein SMG5 isoform X1 K11125 SMG5; protein SMG5
E 102380384 SMG6; telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 102385679 SMG7; LOW QUALITY PROTEIN: protein SMG7 K14409 SMG7; protein SMG7
E 102382484 ZFP36L1; mRNA decay activator protein ZFP36L1 isoform X1 K18753 ZFP36L; butyrate response factor
E 102375202 LIN28A; protein lin-28 homolog A K18754 LIN28; protein lin-28
E 102384179 LIN28B; protein lin-28 homolog B isoform X1 K18754 LIN28; protein lin-28
E 102381087 HTT; huntingtin isoform X4 K04533 HD; huntingtin
E 102373907 IPO8; importin-8 K18755 IPO8; importin-8
E 102383639 BICC1; protein bicaudal C homolog 1 K18756 BICC1; protein bicaudal C
E 102383156 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102386385 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102369602 PRKACA; cAMP-dependent protein kinase catalytic subunit alpha isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 102373080 PRKACB; cAMP-dependent protein kinase catalytic subunit beta isoform X2 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 102375689 LARP1; la-related protein 1 isoform X1 K18757 LARP1; la-related protein 1
E 102387223 LARP1B; la-related protein 1B isoform X1 K18757 LARP1; la-related protein 1
E 102374524 ATXN2; ataxin-2 isoform X8 K23625 ATXN2_2L; ataxin 2/2L
E 102377706 ATXN2L; ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 102379438 DCP2; m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 102370215 DCP1A; mRNA-decapping enzyme 1A isoform X1 K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 102382217 DCP1B; LOW QUALITY PROTEIN: mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 102374395 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 102373949 LSM2; LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 102386899 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 102387363 LSM4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 102376189 LSM5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 102371039 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 102375094 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 102368199 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 102368899 KLC3; kinesin light chain 3 isoform X2 K10407 KLC; kinesin light chain
E 102382439 KLC4; kinesin light chain 4 isoform X2 K10407 KLC; kinesin light chain
E 102385257 KLC1; kinesin light chain 1 isoform X1 K10407 KLC; kinesin light chain
E 102376880 unconventional myosin-Vb-like isoform X1 K10357 MYO5; myosin V
E 102375640 unconventional myosin-Vb K10357 MYO5; myosin V
E 102368182 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 102382119 MYO5A; unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 102374632 tubulin alpha-8 chain isoform X1 K07374 TUBA; tubulin alpha
E 102375204 tubulin alpha-4 chain-like K07374 TUBA; tubulin alpha
E 102376560 tubulin alpha-3 chain-like isoform X2 K07374 TUBA; tubulin alpha
E 102387977 tubulin alpha-4A chain K07374 TUBA; tubulin alpha
E 102384891 tubulin alpha-1B chain K07374 TUBA; tubulin alpha
E 102370195 tubulin alpha-3 chain-like isoform X1 K07374 TUBA; tubulin alpha
E 102370581 tubulin alpha-3 chain isoform X1 K07374 TUBA; tubulin alpha
E 102370425 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 102384635 LOW QUALITY PROTEIN: tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 106722873 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 102374035 tubulin alpha-8 chain isoform X1 K07374 TUBA; tubulin alpha
E 102388221 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102368538 CPEB4; cytoplasmic polyadenylation element-binding protein 4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102375879 CPEB3; cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102380227 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102386502 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 102370629 TACC3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 102385285 TNRC6A; trinucleotide repeat-containing gene 6A protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 102374162 TNRC6B; trinucleotide repeat-containing gene 6B protein isoform X7 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 102369798 TNRC6C; trinucleotide repeat-containing gene 6C protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 102380319 CNOT1; LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 102379688 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 102386133 CNOT3; CCR4-NOT transcription complex subunit 3 isoform X2 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 102371132 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X2 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 102369135 CNOT6L; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102375620 CNOT6; CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102379879 CNOT7; CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102386913 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X2 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102382406 LOW QUALITY PROTEIN: uncharacterized protein KIAA0355 homolog K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 102383536 DIS3L2; DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 102369243 PAN2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 102370080 PAN3; LOW QUALITY PROTEIN: PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 102373713 TOB1; protein Tob1 K14443 TOB; protein Tob/BTG
E 102383214 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 102388694 protein BTG1-like K14443 TOB; protein Tob/BTG
E 102387695 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 102369834 BTG1; protein BTG1 K14443 TOB; protein Tob/BTG
E 102369498 protein BTG3-like isoform X1 K14443 TOB; protein Tob/BTG
E 102371140 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 102374550 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 102374177 PATL1; protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 102380393 EDC3; enhancer of mRNA-decapping protein 3 isoform X1 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 102372424 EDC4; enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 102373885 UPF2; regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 102377674 UPF3A; regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 102376629 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 102378591 TRIM71; E3 ubiquitin-protein ligase TRIM71 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 102378001 POLR2G; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 102379754 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 102382397 ZAR1L; ZAR1-like protein K18762 ZAR1; zygote arrest protein 1
E 102373556 YTHDF1; YTH domain-containing family protein 1 isoform X3 K20102 YTHDF; YTH domain-containing family protein
E 102375635 YTHDF2; YTH domain-containing family protein 2 K20102 YTHDF; YTH domain-containing family protein
E 102384579 YTHDF3; YTH domain-containing family protein 3 isoform X2 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 102382622 TIAL1; nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 102380443 TIA1; nucleolysin TIA-1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 102373528 PABPC1L; polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 102386577 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 102380833 PABPC1; polyadenylate-binding protein 1 isoform X2 K13126 PABPC; polyadenylate-binding protein
E 102382697 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X3 K17597 STAU; double-stranded RNA-binding protein Staufen
E 102385074 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 102373895 FMR1; synaptic functional regulator FMR1 K15516 FMR; fragile X mental retardation protein
E 102368657 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 102385737 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X3 K15516 FMR; fragile X mental retardation protein
E 102382879 ZBP1; Z-DNA-binding protein 1 isoform X1 K12965 ZBP1; Z-DNA binding protein 1
E 102379279 ELAVL1; ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 102367938 G3BP1; ras GTPase-activating protein-binding protein 1 isoform X1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 102373301 G3BP2; ras GTPase-activating protein-binding protein 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 102374277 EIF2A; eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A
E 102381844 EIF3B; eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B
E 102382610 EIF4A2; eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 102368168 EIF4A1; eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 102385527 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 102375389 EIF4B; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4B K03258 EIF4B; translation initiation factor 4B
E 102387932 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X3 K03260 EIF4G; translation initiation factor 4G
E 102379744 EIF4G1; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1 K03260 EIF4G; translation initiation factor 4G
E 102382786 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 102374386 RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X3 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 102382254 RPS6KA2; ribosomal protein S6 kinase alpha-2 isoform X2 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 102378267 RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 102368134 ribosomal protein S6 kinase alpha-6 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 102373120 receptor of activated protein C kinase 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 102384689 TRAF2; TNF receptor-associated factor 2 isoform X1 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 102374093 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 102387941 TDRD3; tudor domain-containing protein 3 isoform X2 K18404 TDRD3; tudor domain-containing protein 3
E 102370234 LARP4B; la-related protein 4B isoform X1 K18763 LARP4; la-related protein 4
E 102371759 LARP4; la-related protein 4 isoform X1 K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 102370215 DCP1A; mRNA-decapping enzyme 1A isoform X1 K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 102382217 DCP1B; LOW QUALITY PROTEIN: mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 102379438 DCP2; m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 102386068 DDX6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 102380393 EDC3; enhancer of mRNA-decapping protein 3 isoform X1 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 102372424 EDC4; enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 102374177 PATL1; protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 102374395 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 102373949 LSM2; LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 102386899 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 102387363 LSM4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 102376189 LSM5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 102371039 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 102375094 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 102368199 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 102380424 XRN1; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 102374361 XRN2; 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 102373084 U8 snoRNA-decapping enzyme-like K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 102384846 DCPS; m7GpppX diphosphatase isoform X1 K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 102378508 HELZ; LOW QUALITY PROTEIN: probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 102383571 EXOSC1; exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 102368126 EXOSC2; exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 112547872 EXOSC3; exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40
E 102368349 EXOSC7; exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42
E 102367882 EXOSC8; exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 102384078 EXOSC9; exosome complex component RRP45 isoform X2 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 102368846 DIS3; exosome complex exonuclease RRP44 isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 102373465 DIS3L; DIS3-like exonuclease 1 isoform X1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 102371698 EXOSC10; exosome component 10 isoform X1 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 102376452 C1D; nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 102376466 MPHOSPH6; M-phase phosphoprotein 6 isoform X2 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 102388609 LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 102379771 TENT4A; non-canonical poly(A) RNA polymerase PAPD7 isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 102387872 TENT4B; non-canonical poly(A) RNA polymerase PAPD5 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 102367939 ZCCHC7; zinc finger CCHC domain-containing protein 7 isoform X2 K12597 AIR1_2; protein AIR1/2
E 102385002 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 102380776 SKIV2L; LOW QUALITY PROTEIN: helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 102379100 TTC37; tetratricopeptide repeat protein 37 isoform X1 K12600 SKI3; superkiller protein 3
E 102384700 WDR61; WD repeat-containing protein 61 isoform X2 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 102369135 CNOT6L; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102375620 CNOT6; CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102380319 CNOT1; LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 102379688 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 102386133 CNOT3; CCR4-NOT transcription complex subunit 3 isoform X2 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 102371132 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X2 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 102379879 CNOT7; CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102386913 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X2 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 106723000 CNOT9; CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 102381998 CNOT10; CCR4-NOT transcription complex subunit 10 isoform X2 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 102369243 PAN2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 102370080 PAN3; LOW QUALITY PROTEIN: PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 102379982 PARN; poly(A)-specific ribonuclease PARN isoform X2 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 102378208 PNLDC1; poly(A)-specific ribonuclease PNLDC1 isoform X3 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 102380862 DHX36; ATP-dependent RNA helicase DHX36 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 102373713 TOB1; protein Tob1 K14443 TOB; protein Tob/BTG
E 102383214 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 102388694 protein BTG1-like K14443 TOB; protein Tob/BTG
E 102387695 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 102369834 BTG1; protein BTG1 K14443 TOB; protein Tob/BTG
E 102369498 protein BTG3-like isoform X1 K14443 TOB; protein Tob/BTG
E 102371140 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 102373172 NOCT; nocturnin isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 102370396 ERI1; 3'-5' exoribonuclease 1 isoform X1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 102387939 ERI2; ERI1 exoribonuclease 2 isoform X1 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 102384846 DCPS; m7GpppX diphosphatase isoform X1 K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 102370098 PDE12; 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 102388115 IREB2; iron-responsive element-binding protein 2 isoform X1 K22416 IREB2; iron-responsive element-binding protein 2
E 102378508 HELZ; LOW QUALITY PROTEIN: probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 102388678 HELZ2; helicase with zinc finger domain 2 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 102382821 NRDE2; LOW QUALITY PROTEIN: protein NRDE2 homolog K26109 NRDE2; nuclear exosome regulator NRDE2
E 102385104 SAMD4A; protein Smaug homolog 1 isoform X1 K27396 SMG; protein Smaug
E 102372771 SAMD4B; LOW QUALITY PROTEIN: protein Smaug homolog 2 K27396 SMG; protein Smaug
E 102375571 FOCAD; focadhesin isoform X2 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 102371017 ribonuclease-like K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 112548987 ribonuclease pancreatic-like K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 106723468 LOW QUALITY PROTEIN: ribonuclease-like K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 102375656 ribonuclease pancreatic-like K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 102387236 endoribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 102376146 ZC3H12C; probable ribonuclease ZC3H12C isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 102369948 ZC3H12A; endoribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 102370406 ZC3H12B; probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 102383715 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 102374333 REXO2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 102369082 ENO1; alpha-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102378235 LOW QUALITY PROTEIN: beta-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102375418 ENO2; gamma-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102384340 PNPT1; polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X3 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 102372557 PFKP; ATP-dependent 6-phosphofructokinase, platelet type isoform X5 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102372324 PFKM; ATP-dependent 6-phosphofructokinase, muscle type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102381752 PFKL; ATP-dependent 6-phosphofructokinase, liver type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 102370358 HSPA9; stress-70 protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 102373513 HSPD1; 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 102368126 EXOSC2; exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 102383571 EXOSC1; exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 102368349 EXOSC7; exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024