+D GENES KO #

  KEGG Orthology (KO) - Allochromatium tepidum

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:atep00010] D Atep_17080 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Atep_27050 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Atep_28700 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Atep_23200 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Atep_06980 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Atep_09240 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Atep_07010 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Atep_07000 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Atep_20840 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Atep_06790 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Atep_06990 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Atep_20490 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Atep_01960 intein-containing phosphoenolpyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Atep_05200 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Atep_05190 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_13860 hypothetical protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Atep_28000 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Atep_03360 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Atep_21540 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Atep_01890 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Atep_20460 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] C 00020 Citrate cycle (TCA cycle) [PATH:atep00020] D Atep_00510 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Atep_09850 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Atep_19950 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Atep_16290 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Atep_10210 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Atep_10200 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_17200 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Atep_17190 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Atep_14590 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Atep_15780 sdhB-1; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Atep_14570 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Atep_14580 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Atep_29460 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Atep_24510 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D Atep_17970 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Atep_17960 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Atep_05200 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Atep_05190 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Atep_13860 hypothetical protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Atep_28000 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:atep00030] D Atep_27050 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Atep_27220 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Atep_11530 hypothetical protein K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D Atep_14880 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Atep_28040 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Atep_07020 tkt1; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Atep_07920 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Atep_28620 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Atep_07660 putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D Atep_21540 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Atep_01890 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Atep_23110 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Atep_11690 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Atep_06980 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Atep_23200 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Atep_28700 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:atep00040] D Atep_12930 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Atep_08030 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Atep_28040 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:atep00051] D Atep_10520 xanB; xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Atep_24550 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Atep_01890 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Atep_06140 hypothetical protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Atep_28700 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Atep_23200 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Atep_06980 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Atep_09240 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Atep_26090 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:atep00052] D Atep_14550 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Atep_15810 galE-1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Atep_08030 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Atep_21540 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Atep_01890 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Atep_17080 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Atep_28700 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:atep00053] D Atep_12930 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Atep_19150 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:atep00500] D Atep_08030 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Atep_23760 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Atep_19860 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Atep_19900 glgC2; glucose-1-phosphate adenylyltransferase 2 K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Atep_20980 glgC_1; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Atep_24450 glgC_2; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Atep_14130 hypothetical protein K00703 glgA; starch synthase [EC:2.4.1.21] D Atep_17730 glgA2; glycogen synthase 2 K00703 glgA; starch synthase [EC:2.4.1.21] D Atep_27230 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Atep_24440 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Atep_17180 alpha-1,4 glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Atep_24170 glgP; alpha-1,4 glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Atep_15190 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Atep_08160 hypothetical protein K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D Atep_17710 glycoside hydrolase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D Atep_14140 hypothetical protein K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D Atep_14890 glgX_1; glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68] D Atep_17700 glgX_2; glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68] D Atep_21540 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Atep_01890 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Atep_17080 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Atep_27050 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:atep00520] D Atep_09480 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Atep_02170 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Atep_13650 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Atep_04160 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Atep_17440 gph; phosphoglycolate phosphatase, bacterial K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D Atep_05260 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D Atep_24940 nucleotidyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D Atep_25930 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Atep_03050 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Atep_20210 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D Atep_19140 wbpA; UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Atep_14540 dTDP-glucose 4,6-dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D Atep_17080 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Atep_21540 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Atep_01890 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Atep_08030 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Atep_12930 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Atep_14550 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Atep_15810 galE-1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Atep_19150 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Atep_26090 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Atep_27050 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Atep_24550 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Atep_10520 xanB; xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Atep_06140 hypothetical protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Atep_19860 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Atep_19850 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Atep_20170 hypothetical protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Atep_19900 glgC2; glucose-1-phosphate adenylyltransferase 2 K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Atep_20980 glgC_1; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Atep_24450 glgC_2; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:atep00620] D Atep_03360 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Atep_13860 hypothetical protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Atep_28000 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Atep_05200 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Atep_05190 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_09630 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Atep_09620 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Atep_06990 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Atep_04010 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Atep_21970 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Atep_21980 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Atep_19570 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Atep_15990 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Atep_13750 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Atep_03750 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Atep_20930 Zn-dependent hydrolase glyoxalase II family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Atep_00520 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Atep_16340 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Atep_17970 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Atep_17960 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Atep_24510 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D Atep_29460 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Atep_27720 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Atep_20490 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Atep_01960 intein-containing phosphoenolpyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Atep_25640 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Atep_08640 leuA-2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Atep_18590 leuA_2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Atep_22370 hypothetical protein K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:atep00630] D Atep_15670 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D Atep_03360 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Atep_25640 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D Atep_00510 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Atep_09850 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Atep_19950 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Atep_02410 phbB; beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D Atep_08910 glcD; glycolate oxidase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Atep_03280 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D Atep_03290 glcF; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Atep_03470 glcF-2; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Atep_04450 hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Atep_28030 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Atep_08530 cbbL_1; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Atep_24980 ribulose bisphosphate carboxylase-like protein K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Atep_27170 cbbL_2; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Atep_08540 rbcS_1; ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Atep_27160 rbcS_2; ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Atep_27180 hypothetical protein K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Atep_07320 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Atep_03620 gltB; glutamate synthase K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D Atep_26470 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Atep_20080 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Atep_10450 gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Atep_10440 gcvPB; putative glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Atep_10470 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_10460 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Atep_11690 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] C 00640 Propanoate metabolism [PATH:atep00640] D Atep_03360 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Atep_02710 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Atep_09630 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Atep_09620 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_29450 alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Atep_04010 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Atep_21970 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Atep_21980 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Atep_19570 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Atep_17190 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Atep_17200 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Atep_02590 prpC_1; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D Atep_02550 acnM; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D Atep_02560 putative methylaconitate Delta-isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D Atep_02600 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D Atep_11250 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:atep00650] D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Atep_02350 phbC; poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D Atep_02360 phaE; class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE D Atep_02410 phbB; beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D Atep_14590 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Atep_15780 sdhB-1; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Atep_14570 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Atep_14580 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Atep_13860 hypothetical protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Atep_28000 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Atep_25600 ilvB-2; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Atep_29110 ilvB; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Atep_29120 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:atep00660] D Atep_25600 ilvB-2; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Atep_29110 ilvB; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Atep_29120 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Atep_17190 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Atep_17200 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Atep_02290 leuA_1; 2-isopropylmalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Atep_19680 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Atep_19670 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Atep_19640 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:atep00562] D Atep_01510 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Atep_10510 phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Atep_09240 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:atep00190] D Atep_09260 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Atep_09270 nuoB1; NADH-quinone oxidoreductase subunit B 1 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Atep_09280 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Atep_09290 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Atep_09300 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Atep_09310 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Atep_09320 nuoG; NADH-quinone oxidoreductase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Atep_09330 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Atep_09340 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Atep_09350 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Atep_09360 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Atep_09370 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Atep_09380 nuoM; NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Atep_09390 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Atep_21020 hydrogenase HoxE K05586 hoxE; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2] D Atep_21030 NADH dehydrogenase K05587 hoxF; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2] D Atep_21040 hoxU; hydrogenase HoxU K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2] D Atep_14590 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Atep_15780 sdhB-1; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Atep_14570 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Atep_14580 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Atep_02440 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Atep_02450 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Atep_02460 petC; cytochrome c K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Atep_04920 ccoN; cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Atep_04930 ccoO2; cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Atep_04950 Cbb3-type cytochrome c oxidase subunit K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Atep_06290 cydA; cytochrome bd oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Atep_06280 cytochrome bd oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Atep_06270 ybgT; cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Atep_04120 atpA2; ATP synthase subunit alpha 2 K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Atep_04140 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Atep_04130 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Atep_04110 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Atep_04150 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Atep_04080 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Atep_04100 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Atep_04090 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Atep_22160 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Atep_22200 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Atep_22110 ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Atep_22220 hypothetical protein K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Atep_22150 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Atep_22120 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Atep_22130 ATPase K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Atep_28710 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Atep_04540 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:atep00710] D Atep_08530 cbbL_1; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Atep_24980 ribulose bisphosphate carboxylase-like protein K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Atep_27170 cbbL_2; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Atep_08540 rbcS_1; ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Atep_27160 rbcS_2; ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Atep_27180 hypothetical protein K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Atep_07000 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Atep_07010 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Atep_06980 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Atep_23200 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Atep_07020 tkt1; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Atep_28620 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Atep_15610 prk; phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D Atep_09240 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Atep_28040 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Atep_27720 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Atep_20490 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Atep_00520 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Atep_16340 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:atep00680] D Atep_20080 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Atep_07320 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Atep_11690 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Atep_06790 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Atep_27720 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Atep_06980 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Atep_23200 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Atep_28700 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Atep_09630 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Atep_09620 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Atep_03360 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Atep_01960 intein-containing phosphoenolpyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Atep_20840 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Atep_12140 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Atep_14640 serC_1; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Atep_18960 serC_2; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Atep_06090 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:atep00910] D Atep_00950 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Atep_26470 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Atep_03610 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Atep_03620 gltB; glutamate synthase K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D Atep_10340 cynT; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D Atep_15170 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:atep00920] D Atep_15360 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Atep_15500 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Atep_15390 adenylylsulfate reductase subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2] D Atep_15380 adenylyl-sulfate reductase subunit beta K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2] D Atep_06370 formate dehydrogenase K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6] D Atep_06380 ferredoxin K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB D Atep_06390 DMSO reductase K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC D Atep_20550 soxY; thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D Atep_20560 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D Atep_14700 dsrA-2; sulfite reductase, dissimilatory-type subunit alpha K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D Atep_14710 dsrB-1; sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] D Atep_14780 glutamate synthase K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit D Atep_14760 Hdr menaquinol oxidoreductase cytochrome b subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10] D Atep_14770 4Fe-4S ferredoxin K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10] D Atep_14790 hypothetical protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J D Atep_14800 Hdr menaquinol oxidoreductase iron-sulfur subunit 1 K27190 dsrO; [DsrC]-trisulfide reductase subunit O D Atep_14810 Hdr menaquinol oxidoreductase integral membrane subunit K27191 dsrP; [DsrC]-trisulfide reductase subunit P D Atep_15050 hypothetical protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Atep_17490 sulfide:quinone reductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Atep_23030 fccB-2; cytochrome c K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D Atep_23020 cytochrome subunit of sulfide dehydrogenase K17230 fccA; cytochrome subunit of sulfide dehydrogenase D Atep_01530 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Atep_06350 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Atep_16090 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:atep00061] D Atep_04010 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Atep_21970 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Atep_21980 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Atep_19570 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Atep_21660 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D Atep_21680 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Atep_21690 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Atep_21650 fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Atep_16970 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_16980 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_21670 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_18300 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Atep_22700 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Atep_21400 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Atep_19360 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:atep00071] D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Atep_19360 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Atep_24210 aas; acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:atep00561] D Atep_11690 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Atep_21700 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Atep_17310 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Atep_27420 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Atep_10430 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Atep_06630 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:atep00564] D Atep_01740 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Atep_17310 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Atep_27420 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Atep_10430 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Atep_24210 aas; acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D Atep_22610 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Atep_21010 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Atep_19010 hypothetical protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Atep_17980 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Atep_20000 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D Atep_15960 phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D Atep_15040 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:atep00230] D Atep_15900 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Atep_21540 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Atep_01890 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Atep_23110 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Atep_16080 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Atep_05310 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Atep_15940 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Atep_19390 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Atep_15950 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Atep_06030 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Atep_06020 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Atep_24920 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Atep_19420 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Atep_05330 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Atep_00720 NAD 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Atep_04890 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Atep_09590 hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D Atep_08850 UPF0345 protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Atep_05110 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Atep_09470 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Atep_24120 hypothetical protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Atep_07470 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Atep_28590 yggV; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Atep_09920 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Atep_24110 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Atep_27690 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Atep_15680 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Atep_15770 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Atep_07970 hypothetical protein K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Atep_27670 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Atep_05160 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Atep_09970 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D Atep_17600 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Atep_18050 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Atep_18160 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Atep_21520 adK; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Atep_00240 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Atep_16000 cpdA; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D Atep_17540 apaH; bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D Atep_15500 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Atep_15360 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:atep00240] D Atep_04280 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Atep_04270 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Atep_00920 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Atep_00930 pyrC_1; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Atep_09100 pyrC_2; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Atep_27990 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D Atep_24410 pyrD; dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Atep_01700 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Atep_08020 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Atep_22580 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Atep_07470 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Atep_00240 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Atep_24790 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Atep_06760 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Atep_15850 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Atep_00720 NAD 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Atep_04890 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Atep_08850 UPF0345 protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Atep_00910 hypothetical protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Atep_07970 hypothetical protein K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Atep_15680 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Atep_15770 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Atep_21630 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Atep_27370 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Atep_20830 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:atep00250] D Atep_18540 aspC; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Atep_19300 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Atep_17640 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Atep_09060 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Atep_14960 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Atep_24420 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Atep_26830 asnB; putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Atep_07320 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Atep_13430 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Atep_09520 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Atep_18160 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Atep_19420 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Atep_00920 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Atep_03610 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Atep_26470 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Atep_04280 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Atep_04270 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Atep_02170 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Atep_16080 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:atep00260] D Atep_17880 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Atep_19630 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Atep_17780 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Atep_02280 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Atep_20080 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Atep_07320 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Atep_11690 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Atep_20840 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Atep_12140 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Atep_14640 serC_1; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Atep_18960 serC_2; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Atep_06090 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Atep_10450 gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Atep_10440 gcvPB; putative glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Atep_10470 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_10460 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Atep_21010 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Atep_19130 ilvA1; L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Atep_19580 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Atep_19590 trpB_1; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Atep_23560 trpB_2; tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:atep00270] D Atep_01530 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Atep_14920 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Atep_11880 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Atep_07040 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Atep_05110 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Atep_19000 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Atep_12550 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D Atep_18990 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Atep_24730 ddeI; cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Atep_07100 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Atep_17880 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Atep_19630 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Atep_17780 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Atep_06350 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Atep_17850 metY; O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Atep_16090 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D Atep_20440 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Atep_05150 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Atep_00850 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Atep_18540 aspC; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Atep_12080 cysM; cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D Atep_12140 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Atep_14640 serC_1; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Atep_18960 serC_2; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:atep00280] D Atep_20440 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_01030 ghr; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:atep00290] D Atep_19130 ilvA1; L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Atep_02290 leuA_1; 2-isopropylmalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Atep_19680 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Atep_19670 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Atep_19640 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Atep_25600 ilvB-2; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Atep_29110 ilvB; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Atep_29120 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Atep_29130 ilvC; ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Atep_09000 ilvD1; dihydroxy-acid dehydratase 1 K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Atep_20440 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Atep_08640 leuA-2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Atep_18590 leuA_2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:atep00300] D Atep_17780 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Atep_17880 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Atep_19630 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Atep_09400 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Atep_19330 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Atep_00340 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Atep_09040 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Atep_00330 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Atep_00350 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Atep_20260 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Atep_20240 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Atep_03700 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Atep_02990 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:atep00310] D Atep_10200 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Atep_26220 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00220 Arginine biosynthesis [PATH:atep00220] D Atep_09030 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Atep_13430 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Atep_09520 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Atep_26470 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Atep_18540 aspC; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Atep_20850 argA; amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D Atep_03140 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Atep_26540 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Atep_02790 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Atep_09040 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Atep_25890 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:atep00330] D Atep_21580 ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D Atep_03990 aguB; apolipoprotein acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D Atep_21560 nspC; carboxynorspermidine/carboxyspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D Atep_28570 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Atep_07230 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Atep_17480 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Atep_02310 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Atep_18540 aspC; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Atep_26220 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:atep00340] D Atep_25920 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Atep_18170 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Atep_24700 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D Atep_24710 hypothetical protein K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Atep_11290 hypothetical protein K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Atep_13830 hypothetical protein K01663 HIS7; imidazole glycerol-phosphate synthase [EC:4.3.2.10] D Atep_24720 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Atep_12160 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Atep_25900 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Atep_25910 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Atep_09950 dimethylhistidine N-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:atep00350] D Atep_18540 aspC; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Atep_12160 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Atep_25900 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:atep00360] D Atep_05910 phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Atep_05930 paaK-2; phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Atep_27900 phenylacetic acid degradation protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D Atep_18540 aspC; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Atep_12160 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Atep_25900 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Atep_26220 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Atep_03970 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D Atep_09840 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00380 Tryptophan metabolism [PATH:atep00380] D Atep_10200 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:atep00400] D Atep_10090 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Atep_00430 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Atep_21960 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Atep_01020 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Atep_00440 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Atep_15840 hypothetical protein K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Atep_17680 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Atep_28020 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Atep_03410 trpG; anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Atep_03420 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Atep_19600 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Atep_03430 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Atep_19580 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Atep_19590 trpB_1; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Atep_23560 trpB_2; tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Atep_12150 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Atep_12170 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Atep_18540 aspC; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Atep_12160 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Atep_25900 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:atep00410] D Atep_27240 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Atep_27250 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:atep00430] D Atep_09620 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Atep_09630 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:atep00450] D Atep_14920 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Atep_11880 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Atep_17210 hypothetical protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Atep_13590 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Atep_15360 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Atep_18450 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:atep00460] D Atep_23760 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Atep_20080 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:atep00470] D Atep_22040 dadX; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D Atep_26220 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Atep_03060 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Atep_23400 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Atep_03010 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Atep_17640 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Atep_20260 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Atep_20240 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:atep00480] D Atep_05150 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Atep_00850 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Atep_23550 pepA2; putative cytosol aminopeptidase 2 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Atep_16060 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Atep_22410 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D Atep_16290 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Atep_14880 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Atep_27220 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Atep_12500 btuE; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Atep_22420 glutathione amide-dependent peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis D Atep_19700 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Atep_21170 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Atep_24340 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:atep00540] D Atep_05320 lpxA_1; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Atep_22710 lpxA_2; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam ine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Atep_03100 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Atep_22690 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Atep_14100 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Atep_22720 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Atep_20120 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Atep_25990 kdsD; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Atep_06770 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Atep_26000 hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Atep_20110 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Atep_19170 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Atep_01570 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Atep_17110 lpxL; lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Atep_01680 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Atep_19910 hldE; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D Atep_27410 gmhB; D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Atep_25660 glycosyl transferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Atep_27770 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:atep00541] D Atep_08030 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Atep_14550 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Atep_15810 galE-1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Atep_12930 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Atep_19150 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Atep_26910 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Atep_26900 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Atep_19840 rmlC_1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Atep_26920 rmlC_2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Atep_26930 rfbD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Atep_19860 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Atep_19850 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Atep_20170 hypothetical protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Atep_10520 xanB; xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Atep_24550 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Atep_06140 hypothetical protein K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Atep_04160 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Atep_19140 wbpA; UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Atep_20210 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00550 Peptidoglycan biosynthesis [PATH:atep00550] D Atep_25930 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Atep_03050 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Atep_03040 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Atep_03010 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Atep_03700 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Atep_03060 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Atep_02990 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Atep_22600 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Atep_17790 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Atep_02830 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Atep_03000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Atep_03030 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Atep_10110 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Atep_17760 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Atep_15340 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Atep_09540 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Atep_26180 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Atep_02980 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Atep_26210 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Atep_12810 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:atep00552] D Atep_17790 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Atep_02830 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Atep_06630 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:atep00543] D Atep_01530 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:atep00730] D Atep_02320 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Atep_02750 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Atep_19450 putative D-amino acid oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19] D Atep_03760 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Atep_24470 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D Atep_02730 thiE; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Atep_20010 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Atep_20590 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Atep_21520 adK; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:atep00740] D Atep_20040 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Atep_20060 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Atep_20030 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Atep_20050 ribC; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Atep_13940 riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Atep_15900 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Atep_20620 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:atep00750] D Atep_15660 pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Atep_14640 serC_1; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Atep_18960 serC_2; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Atep_05230 pdxA1; 4-hydroxythreonine-4-phosphate dehydrogenase 1 K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Atep_19180 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Atep_02280 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:atep00760] D Atep_19300 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Atep_22990 nadA; quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Atep_18650 nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Atep_00720 NAD 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Atep_04890 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Atep_17510 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Atep_00240 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Atep_05070 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Atep_17920 ygaD; nicotinamide-nucleotide amidohydrolase PncC K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Atep_08680 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Atep_05420 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Atep_05430 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Atep_05440 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:atep00770] D Atep_25600 ilvB-2; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Atep_29110 ilvB; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Atep_29120 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Atep_29130 ilvC; ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Atep_09000 ilvD1; dihydroxy-acid dehydratase 1 K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Atep_27260 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Atep_24180 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Atep_27250 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Atep_28200 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Atep_27360 coaBC; phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Atep_00240 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Atep_26390 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Atep_03310 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Atep_17800 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Atep_20440 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Atep_27240 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:atep00780] D Atep_12830 bioC; malonyl-[acyl-carrier protein] O-methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Atep_21650 fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Atep_16970 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_16980 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_21670 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_22700 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Atep_21400 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Atep_12840 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Atep_12850 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Atep_18130 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Atep_12820 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Atep_12860 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Atep_14490 [FeFe] hydrogenase maturase subunit HydE K01012 bioB; biotin synthase [EC:2.8.1.6] D Atep_28190 birA; bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:atep00785] D Atep_26240 lipB; octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Atep_24960 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_05200 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Atep_05190 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Atep_10210 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Atep_10200 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Atep_10450 gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Atep_10440 gcvPB; putative glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Atep_10470 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Atep_10460 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:atep00790] D Atep_04800 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D Atep_04390 ntpA; NUDIX pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D Atep_17320 folB; 7,8-dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Atep_21750 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Atep_17750 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Atep_17530 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Atep_19470 folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Atep_20040 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Atep_24570 pabB; aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Atep_28430 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Atep_16960 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Atep_05500 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Atep_28440 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Atep_28420 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Atep_20580 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Atep_17410 moaA; cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Atep_28720 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Atep_01240 moaE; molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Atep_08990 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Atep_08980 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Atep_15000 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:atep00670] D Atep_17530 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Atep_12520 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Atep_20080 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Atep_15940 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Atep_05330 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Atep_12250 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Atep_10470 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Atep_14920 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Atep_20830 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Atep_07110 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Atep_28630 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:atep00860] D Atep_03880 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Atep_23140 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Atep_02720 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Atep_01010 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Atep_10230 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Atep_10240 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Atep_00580 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Atep_06040 hemF; oxygen-dependent coproporphyrinogen-III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D Atep_05830 coproporphyrinogen-III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Atep_14500 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Atep_21470 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Atep_19060 FAD-dependent oxidoreductase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D Atep_00320 hemH2; ferrochelatase 2 K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Atep_25560 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D Atep_20740 cobI; precorrin-3B C(17)-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131] D Atep_10670 hypothetical protein K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D Atep_20680 precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Atep_21880 hypothetical protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Atep_12110 precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D Atep_20720 precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Atep_20780 precorrin-6Y C5,15-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D Atep_20750 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Atep_14820 cbiA; cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Atep_20810 cobB; hydrogenobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Atep_30070 ATPase K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D Atep_12130 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Atep_20660 cbiB; cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Atep_21270 cobC; threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D Atep_22030 cobU; adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Atep_01400 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Atep_01420 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Atep_21260 hypothetical protein K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Atep_01410 hypothetical protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Atep_24060 alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Atep_05760 bchH; magnesium chelatase subunit H K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1] D Atep_14000 Mg-protoporphyrin IX chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D Atep_13990 Mg-protoporphyrin IX chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D Atep_05780 magnesium protoporphyrin IX methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11] D Atep_12120 magnesium-protoporphyrin IX monomethyl ester cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3] D Atep_13950 coenzyme F420 hydrogenase K21231 bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13] D Atep_05840 bacteriochlorophyll 4-vinyl reductase K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-] D Atep_05770 bchL; light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7] D Atep_05740 bchN; light-independent protochlorophyllide reductase subunit N K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7] D Atep_05750 bchB; light-independent protochlorophyllide reductase subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7] D Atep_05710 bacteriochlorophyll/chlorophyll a synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] D Atep_25150 chlorophyllide reductase iron protein subunit X K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15] D Atep_25140 chlorophyllide reductase subunit Y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15] D Atep_25090 chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15] D Atep_05730 bchF; 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165] D Atep_25160 chlorophyll synthesis pathway protein BchC K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396] D Atep_05700 bchP; geranylgeranyl diphosphate reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] D Atep_27090 hypothetical protein K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:atep00130] D Atep_09460 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Atep_06910 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Atep_20620 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Atep_28690 2-octaprenyl-6-methoxyphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D Atep_14280 ubiG_1; ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Atep_17450 ubiG_2; ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Atep_28680 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D Atep_27620 ubiE; ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Atep_03460 coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D Atep_23630 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D Atep_23640 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D Atep_04790 hypothetical protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D Atep_23710 chloromuconate cycloisomerase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Atep_05850 2-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D Atep_23690 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D Atep_16200 1,4-dihydroxy-2-naphthoyl-CoA hydrolase K12073 E3.1.2.28; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Atep_23700 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Atep_15980 NAD(P)H quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:atep00900] D Atep_03760 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Atep_22620 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Atep_06810 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Atep_23120 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Atep_06820 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Atep_20950 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Atep_19440 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Atep_20620 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Atep_24970 idi; isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Atep_04810 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Atep_25180 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Atep_07190 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Atep_22600 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Atep_05700 bchP; geranylgeranyl diphosphate reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:atep00906] D Atep_25220 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Atep_25230 crtI; phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D Atep_25200 carotenoid 1,2-hydratase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131] D Atep_25190 phytoene desaturase K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27] D Atep_25170 O-methyltransferase K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210] D Atep_21280 glycosyl transferase K10211 crtQ; 4,4'-diaponeurosporenoate glycosyltransferase [EC:2.4.1.-] D Atep_19690 crtO; glycosyl-4,4'-diaponeurosporenoate acyltransferase K10212 K10212; glycosyl-4,4'-diaponeurosporenoate acyltransferase [EC:2.3.1.-] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Atep_07020 tkt1; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:atep00523] D Atep_26910 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Atep_26900 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Atep_19840 rmlC_1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Atep_26920 rmlC_2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Atep_26930 rfbD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:atep01054] D Atep_17640 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides D Atep_23630 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D Atep_26900 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:atep00946] D Atep_23760 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:atep00332] D Atep_07230 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Atep_17480 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:atep00261] D Atep_15360 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Atep_17880 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Atep_19630 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Atep_09400 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Atep_19330 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:atep00521] D Atep_17080 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Atep_21540 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Atep_01890 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Atep_01510 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Atep_10510 phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Atep_26910 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Atep_26900 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Atep_19840 rmlC_1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Atep_26920 rmlC_2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Atep_26930 rfbD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Atep_17080 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:atep00525] D Atep_26910 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Atep_26900 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:atep00401] D Atep_12170 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Atep_18540 aspC; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Atep_12160 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Atep_25900 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Atep_28020 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Atep_03410 trpG; anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Atep_21680 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Atep_16970 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_16980 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_21670 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_21400 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Atep_21660 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:atep00999] D Atep_07040 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Atep_01020 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Atep_23760 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:atep00362] D Atep_09840 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:atep00627] D Atep_15990 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Atep_20620 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D Atep_09840 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00633 Nitrotoluene degradation [PATH:atep00633] D Atep_22470 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Atep_22500 mbhS2; hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Atep_14700 dsrA-2; sulfite reductase, dissimilatory-type subunit alpha K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D Atep_14710 dsrB-1; sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] D Atep_14780 glutamate synthase K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D Atep_09840 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:atep03020] D Atep_13010 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Atep_13020 hypothetical protein K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Atep_13320 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Atep_27680 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:atep03010] D Atep_00550 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Atep_15860 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Atep_22560 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Atep_13140 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Atep_13310 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Atep_13250 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Atep_14230 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Atep_13040 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Atep_13220 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Atep_01850 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Atep_13070 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Atep_13300 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Atep_13030 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Atep_13290 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Atep_13210 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Atep_12620 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Atep_11770 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Atep_13170 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Atep_14240 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Atep_13120 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Atep_04850 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Atep_17280 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Atep_12980 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Atep_13110 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Atep_13080 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Atep_13090 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D Atep_13200 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Atep_13230 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Atep_13000 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Atep_14260 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Atep_12990 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Atep_12970 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Atep_01840 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Atep_13180 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Atep_13270 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Atep_13150 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Atep_13330 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Atep_13240 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Atep_11800 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Atep_29500 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Atep_07200 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Atep_13130 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Atep_13100 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Atep_13190 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Atep_23100 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Atep_07210 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Atep_00760 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Atep_13160 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Atep_13260 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Atep_00530 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Atep_21710 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Atep_00750 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Atep_29930 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Atep_29490 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Atep_r00060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Atep_r00090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Atep_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:atep00970] D Atep_t00150 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Atep_t00240 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Atep_t00040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Atep_t00390 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Atep_t00460 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Atep_t00270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Atep_t00280 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Atep_t00100 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Atep_t00350 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Atep_t00410 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Atep_t00230 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Atep_t00440 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Atep_t00020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Atep_t00480 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Atep_t00140 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Atep_t00330 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Atep_t00360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Atep_t00200 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Atep_t00110 tRNA-His K14226 tRNA-His; tRNA His D Atep_t00030 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Atep_t00400 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Atep_t00470 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Atep_t00080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Atep_t00130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Atep_t00380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Atep_t00070 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Atep_t00310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Atep_t00120 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Atep_t00170 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Atep_t00180 tRNA-Met K14230 tRNA-Met; tRNA Met D Atep_t00300 tRNA-Met K14230 tRNA-Met; tRNA Met D Atep_t00490 tRNA-Met K14230 tRNA-Met; tRNA Met D Atep_t00340 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Atep_t00090 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Atep_t00060 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Atep_t00510 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Atep_t00320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Atep_t00260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Atep_t00450 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Atep_t00050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Atep_t00250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Atep_t00290 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Atep_t00210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Atep_t00220 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Atep_t00190 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Atep_t00500 tRNA-Val K14237 tRNA-Val; tRNA Val D Atep_t00420 tRNA-Val K14237 tRNA-Val; tRNA Val D Atep_t00370 tRNA-Val K14237 tRNA-Val; tRNA Val D Atep_03880 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Atep_26120 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Atep_24740 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Atep_26130 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Atep_11470 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Atep_17890 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Atep_04380 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Atep_27390 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Atep_27400 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Atep_29470 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Atep_19870 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Atep_03770 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Atep_18450 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Atep_12250 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Atep_20500 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Atep_10490 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Atep_14440 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Atep_07500 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Atep_01180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Atep_18290 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Atep_07430 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Atep_29510 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Atep_29520 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Atep_02820 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Atep_23990 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:atep03060] D Atep_13280 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Atep_12950 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Atep_09250 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D Atep_15080 secD-1; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D Atep_15070 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Atep_15090 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D Atep_29900 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Atep_03130 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Atep_01750 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Atep_12420 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Atep_28510 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D Atep_10780 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Atep_24810 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Atep_24820 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D Atep_24690 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC D Atep_19230 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Atep_14330 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:atep04122] D Atep_25580 transcriptional regulator K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Atep_14740 dsrH; multidrug MFS transporter K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Atep_14730 dsrF; sulfurtransferase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D Atep_14720 dsrE; sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Atep_00230 hypothetical protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Atep_17220 tusE; sulfurtransferase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Atep_19930 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Atep_01240 moaE; molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Atep_17410 moaA; cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Atep_08970 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D Atep_12530 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Atep_28720 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Atep_08990 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Atep_24460 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:atep03018] D Atep_02880 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Atep_04430 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] D Atep_09580 hypothetical protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Atep_06790 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Atep_12630 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Atep_01000 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Atep_19410 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Atep_01630 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Atep_15600 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Atep_09560 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D Atep_08710 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Atep_08830 hypothetical protein K04043 dnaK; molecular chaperone DnaK D Atep_01440 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Atep_03800 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Atep_18220 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D Atep_04540 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Atep_27270 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:atep03030] D Atep_03370 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Atep_06740 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Atep_11600 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Atep_00420 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Atep_21620 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Atep_23070 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Atep_18310 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Atep_00020 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Atep_14270 hypothetical protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Atep_17260 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Atep_27510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Atep_06730 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Atep_22840 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Atep_17060 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Atep_22330 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:atep03410] D Atep_06230 nth_1; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Atep_11520 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Atep_19370 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Atep_01580 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Atep_18580 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Atep_21590 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Atep_17060 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Atep_01460 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Atep_22330 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:atep03420] D Atep_11970 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Atep_00260 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D Atep_18550 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D Atep_17990 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D Atep_00570 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Atep_17060 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Atep_22330 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:atep03430] D Atep_15280 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Atep_18240 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Atep_00570 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Atep_11810 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Atep_24130 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Atep_04820 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Atep_01460 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Atep_27510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Atep_11600 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Atep_00020 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Atep_00420 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Atep_23070 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Atep_21620 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Atep_03370 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Atep_06740 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Atep_18310 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Atep_22330 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Atep_03830 site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_19650 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_31460 site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:atep03440] D Atep_01460 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Atep_27510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Atep_00030 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Atep_19190 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Atep_00400 recR; recombination protein RecR K06187 recR; recombination protein RecR D Atep_17910 recA; protein RecA K03553 recA; recombination protein RecA D Atep_17060 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Atep_03250 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Atep_08860 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Atep_03240 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Atep_24890 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Atep_27520 ATPase AAA K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Atep_01060 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Atep_27800 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Atep_01050 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Atep_05600 recD2; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Atep_11600 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Atep_00020 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Atep_00420 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Atep_23070 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Atep_21620 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Atep_03370 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Atep_06740 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Atep_18310 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Atep_01190 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex D Atep_19700 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Atep_21170 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Atep_24340 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:atep02010] D Atep_11070 modA_1; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Atep_11080 modA_2; molybdate-binding periplasmic protein ModA K02020 modA; molybdate transport system substrate-binding protein D Atep_11050 modB; molybdenum transporter ModB K02018 modB; molybdate transport system permease protein D Atep_11040 modD; molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Atep_13820 potF; putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein D Atep_13790 putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein D Atep_13800 putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D Atep_13810 polyamine-transporting ATPase K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D Atep_25950 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D Atep_25960 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Atep_25970 yrbE; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Atep_25940 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D Atep_25980 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Atep_06650 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Atep_11180 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Atep_06660 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D Atep_06670 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D Atep_06680 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Atep_11840 cation ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D Atep_16930 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D Atep_16920 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Atep_12760 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Atep_12740 hypothetical protein K02008 cbiQ; cobalt/nickel transport system permease protein D Atep_12730 cbiO; cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Atep_12770 lipoprotein K10094 cbiK; nickel transport protein D Atep_12750 hypothetical protein K16915 cbiL; nickel transport protein D Atep_26850 transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein D Atep_27570 putative O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein D Atep_26750 sugar ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Atep_27580 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Atep_01340 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein D Atep_01350 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Atep_09710 hypothetical protein K02196 ccmD; heme exporter protein D D Atep_09720 ccmC; heme export protein K02195 ccmC; heme exporter protein C D Atep_09750 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B D Atep_09760 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Atep_16070 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D Atep_23540 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D Atep_26030 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Atep_28530 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Atep_28520 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Atep_20130 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Atep_15710 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Atep_26880 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D Atep_11750 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Atep_11760 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Atep_23750 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:atep02060] D Atep_26110 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Atep_26100 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Atep_26090 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Atep_02890 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Atep_26060 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:atep03070] D Atep_17670 hypothetical protein K12340 tolC; outer membrane protein D Atep_03600 xpsD; type II secretion system protein D K02453 gspD; general secretion pathway protein D D Atep_03490 xpsF; type II secretion system protein F K02455 gspF; general secretion pathway protein F D Atep_03500 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D Atep_03510 xpsH; type II secretion system protein H K02457 gspH; general secretion pathway protein H D Atep_03520 hypothetical protein K02458 gspI; general secretion pathway protein I D Atep_03530 hypothetical protein K02459 gspJ; general secretion pathway protein J D Atep_03540 pefK; type II secretion system protein K K02460 gspK; general secretion pathway protein K D Atep_03570 hypothetical protein K02461 gspL; general secretion pathway protein L D Atep_03580 hypothetical protein K02462 gspM; general secretion pathway protein M D Atep_01130 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Atep_01830 xpsE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Atep_31340 etpE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Atep_15080 secD-1; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D Atep_15070 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Atep_12950 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Atep_09250 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D Atep_13280 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Atep_15090 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D Atep_29900 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Atep_03130 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Atep_28510 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D Atep_01750 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Atep_12420 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Atep_24810 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Atep_24820 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D Atep_24690 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC D Atep_03890 hypothetical protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Atep_10060 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] B B 09132 Signal transduction C 02020 Two-component system [PATH:atep02020] D Atep_15880 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Atep_15890 phoB_2; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Atep_04490 phoB_1; response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Atep_06650 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Atep_11180 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Atep_12800 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_19250 mucD; serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_28100 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_21220 hypothetical protein K02406 fliC; flagellin D Atep_28860 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D Atep_25750 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D Atep_28810 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D Atep_29080 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D Atep_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Atep_24850 mprF; phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D Atep_12450 hypothetical protein K08083 algR; two-component system, LytTR family, response regulator AlgR D Atep_08270 hypothetical protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Atep_08280 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Atep_17870 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D Atep_22540 glnD; bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Atep_05080 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Atep_26490 ntrB; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Atep_26500 ntrC; sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Atep_26470 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Atep_12220 two-component sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Atep_12210 ntrX; sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D Atep_11340 sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Atep_14660 pilR; type 4 fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D Atep_26040 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D Atep_01280 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Atep_22500 mbhS2; hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Atep_22470 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Atep_12010 cheR_1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Atep_16160 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Atep_23330 cheR_2; chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Atep_07830 chemotaxis protein CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Atep_26360 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Atep_00700 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_05000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_05970 tsr; chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_08330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_08570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_11190 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_12030 mcp; chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_16180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_16750 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_16810 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_27490 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_29390 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_10300 aer-2; aerotaxis receptor K03776 aer; aerotaxis receptor D Atep_12000 cheW-2_1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D Atep_16120 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D Atep_28790 cheW-2_2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D Atep_11990 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_16150 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_28830 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_06190 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_11980 transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_16760 cheY-1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_28850 cheY; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_12040 cheB1_1; chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_16170 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_28820 cheB1_2; chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_23340 cheV; chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Atep_00800 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D Atep_00810 pilI; pilus biogenesis protein K02659 pilI; twitching motility protein PilI D Atep_00790 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Atep_00830 pilG; protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D Atep_00820 hypothetical protein K02658 pilH; twitching motility two-component system response regulator PilH D Atep_22770 hypothetical protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH D Atep_22230 hypothetical protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Atep_29050 fleQ; sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Atep_07880 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Atep_14220 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Atep_03440 vfr; cyclic AMP receptor-like protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Atep_25050 photosynthetic reaction center subunit M K08929 pufM; photosynthetic reaction center M subunit D Atep_25060 reaction center protein L chain K08928 pufL; photosynthetic reaction center L subunit D Atep_25000 hypothetical protein K08926 pufA; light-harvesting complex 1 alpha chain D Atep_25020 hypothetical protein K08926 pufA; light-harvesting complex 1 alpha chain D Atep_25070 light-harvesting protein B-870 alpha chain K08926 pufA; light-harvesting complex 1 alpha chain D Atep_25010 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25030 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25080 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25300 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25320 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25340 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25360 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_28450 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_05790 photosynthetic reaction center subunit H K13991 puhA; photosynthetic reaction center H subunit D Atep_02440 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Atep_02450 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Atep_02460 petC; cytochrome c K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Atep_04920 ccoN; cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Atep_04930 ccoO2; cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Atep_04950 Cbb3-type cytochrome c oxidase subunit K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Atep_06290 cydA; cytochrome bd oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Atep_06280 cytochrome bd oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Atep_06270 ybgT; cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Atep_17670 hypothetical protein K12340 tolC; outer membrane protein D Atep_04420 ptpA; phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Atep_18360 hypothetical protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D Atep_05980 hypothetical protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D Atep_12050 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D Atep_23360 flagellar biosynthesis protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Atep_02440 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:atep02024] D Atep_18220 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D Atep_28020 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Atep_03410 trpG; anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Atep_10090 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Atep_19360 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Atep_07880 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Atep_14220 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Atep_03440 vfr; cyclic AMP receptor-like protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Atep_16940 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Atep_20060 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Atep_21390 hbpA; ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Atep_21380 oppB; peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D Atep_21370 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Atep_21360 dppF; ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Atep_29900 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Atep_12950 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Atep_09250 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D Atep_13280 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Atep_15090 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D Atep_03130 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Atep_28510 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D Atep_01750 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Atep_12420 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:atep02030] D Atep_00700 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_05000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_05970 tsr; chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_08330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_08570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_11190 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_12030 mcp; chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_16180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_16750 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_16810 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_27490 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_29390 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_10300 aer-2; aerotaxis receptor K03776 aer; aerotaxis receptor D Atep_11990 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_16150 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_28830 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_12000 cheW-2_1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D Atep_16120 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D Atep_28790 cheW-2_2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D Atep_06190 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_11980 transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_16760 cheY-1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_28850 cheY; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_13690 cheC; CheY-P-specific phosphatase CheC K03410 cheC; chemotaxis protein CheC D Atep_28840 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D Atep_12040 cheB1_1; chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_16170 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_28820 cheB1_2; chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_07830 chemotaxis protein CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Atep_26360 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Atep_23340 cheV; chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Atep_12020 cheD1_1; putative chemoreceptor glutamine deamidase CheD 1 K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Atep_16780 cheD1_2; putative chemoreceptor glutamine deamidase CheD 1 K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Atep_12010 cheR_1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Atep_16160 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Atep_23330 cheR_2; chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Atep_29020 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Atep_28960 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Atep_28950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Atep_25750 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D Atep_28810 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D Atep_29080 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D Atep_25760 motB_1; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D Atep_28800 motB_2; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D Atep_29090 hypothetical protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:atep02040] D Atep_29040 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Atep_29030 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D Atep_29020 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Atep_29010 hypothetical protein K02411 fliH; flagellar assembly protein FliH D Atep_29000 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Atep_28990 hypothetical protein K02413 fliJ; flagellar protein FliJ D Atep_28980 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D Atep_12060 hypothetical protein K02415 fliL; flagellar protein FliL D Atep_28970 hypothetical protein K02415 fliL; flagellar protein FliL D Atep_28960 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Atep_28950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Atep_28940 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Atep_28930 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Atep_28920 fliQ; flagellar export apparatus protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Atep_28910 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Atep_28890 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Atep_28900 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Atep_23350 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Atep_23320 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Atep_23310 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Atep_23300 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D Atep_23290 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D Atep_23280 flgF; flagellar basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Atep_23270 flgG; flagellar basal-body rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG D Atep_23260 flgH; flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Atep_23250 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Atep_23240 flgJ; peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Atep_23230 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D Atep_23220 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D Atep_21220 hypothetical protein K02406 fliC; flagellin D Atep_21240 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D Atep_21250 fliS; B-type flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Atep_27920 hypothetical protein K02423 fliT; flagellar protein FliT D Atep_25750 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D Atep_28810 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D Atep_29080 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D Atep_25760 motB_1; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D Atep_28800 motB_2; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D Atep_29090 hypothetical protein K02557 motB; chemotaxis protein MotB D Atep_23360 flagellar biosynthesis protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Atep_23370 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D Atep_17250 alt; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D Atep_29050 fleQ; sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Atep_26040 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D Atep_28860 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Atep_06790 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D Atep_14920 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:atep01501] D Atep_16300 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Atep_09480 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Atep_05040 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_06170 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_25790 MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_27930 RND transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_05030 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D Atep_06160 multidrug transporter K18138 acrB; multidrug efflux pump D Atep_25780 vmeB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D Atep_27940 acrF; transporter K18138 acrB; multidrug efflux pump D Atep_17670 hypothetical protein K12340 tolC; outer membrane protein D Atep_17760 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Atep_26180 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Atep_02980 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:atep01502] D Atep_03060 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Atep_22040 dadX; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D Atep_02990 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Atep_03000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Atep_03030 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:atep01503] D Atep_18250 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Atep_12800 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_19250 mucD; serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_28100 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_25270 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Atep_31330 hypothetical protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Atep_05040 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_06170 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_25790 MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_27930 RND transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_05030 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D Atep_06160 multidrug transporter K18138 acrB; multidrug efflux pump D Atep_25780 vmeB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D Atep_27940 acrF; transporter K18138 acrB; multidrug efflux pump D Atep_17670 hypothetical protein K12340 tolC; outer membrane protein D Atep_05320 lpxA_1; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Atep_22710 lpxA_2; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam ine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Atep_24850 mprF; phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:atep01000] C 01001 Protein kinases [BR:atep01001] D Atep_03890 hypothetical protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Atep_10060 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Atep_01380 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Atep_08420 hipA; serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Atep_15880 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Atep_08270 hypothetical protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Atep_26490 ntrB; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Atep_12220 two-component sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Atep_11330 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Atep_11990 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_16150 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_28830 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_00790 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Atep_22230 hypothetical protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Atep_18360 hypothetical protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D Atep_04030 hypothetical protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Atep_07850 hypothetical protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Atep_08260 hypothetical protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:atep01009] D Atep_07100 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Atep_21530 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D Atep_06510 prpC_2; protein phosphatase PrpC K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Atep_06090 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:atep01002] D Atep_14330 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Atep_03320 type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Atep_07940 hypothetical protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Atep_22520 hydrogenase 2 maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Atep_09920 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Atep_24110 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Atep_16080 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Atep_03620 gltB; glutamate synthase K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D Atep_02170 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Atep_09060 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Atep_14960 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Atep_24420 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Atep_26830 asnB; putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Atep_24400 protease K05520 yhbO; deglycase [EC:3.5.1.124] D Atep_01800 thiJ; protease K03152 thiJ; protein deglycase [EC:3.5.1.124] D Atep_27540 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Atep_19090 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB D Atep_12440 hypothetical protein K07052 K07052; CAAX protease family protein D Atep_16060 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Atep_06920 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D Atep_26410 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D Atep_26420 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-] D Atep_23550 pepA2; putative cytosol aminopeptidase 2 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Atep_00350 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Atep_22550 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Atep_28670 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Atep_09490 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Atep_10660 ftsH_2; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Atep_13640 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Atep_10420 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Atep_10650 Zn-dependent protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Atep_20540 putative beta-barrel assembly-enhancing protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D Atep_22660 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Atep_12410 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D Atep_12800 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_19250 mucD; serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_28100 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_14990 degQ; serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-] D Atep_26210 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Atep_23950 hypothetical protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Atep_12810 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Atep_21450 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Atep_21430 lon_1; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Atep_29360 lon_2; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Atep_19230 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Atep_02310 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Atep_01790 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Atep_05140 prc; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Atep_10000 ctpA; carboxyl-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Atep_04460 peptidase K04773 sppA; protease IV [EC:3.4.21.-] D Atep_30200 peptidase K04773 sppA; protease IV [EC:3.4.21.-] D Atep_20820 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D Atep_27650 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Atep_06450 yegQ; U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Atep_08300 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D Atep_08310 yhbU; putative protease YhbU K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D Atep_06080 pmbA; PmbA protein K03592 pmbA; PmbA protein D Atep_24750 hypothetical protein K03568 tldD; TldD protein D Atep_16220 membrane protein K06894 yfhM; alpha-2-macroglobulin D Atep_18190 hflC; protein HflC K04087 hflC; modulator of FtsH protease HflC D Atep_18200 protease modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:atep01003] D Atep_22090 dolichol monophosphate mannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D Atep_19700 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Atep_21170 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Atep_24340 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Atep_05540 hypothetical protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D Atep_06630 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Atep_14130 hypothetical protein K00703 glgA; starch synthase [EC:2.4.1.21] D Atep_17730 glgA2; glycogen synthase 2 K00703 glgA; starch synthase [EC:2.4.1.21] D Atep_27230 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Atep_10110 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Atep_09540 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Atep_15340 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Atep_17760 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Atep_23770 hypothetical protein K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:atep01005] D Atep_05320 lpxA_1; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Atep_22710 lpxA_2; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam ine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Atep_22720 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Atep_03100 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Atep_22690 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Atep_26290 phosphoesterase K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D Atep_14100 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Atep_20120 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Atep_01570 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Atep_17110 lpxL; lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Atep_19170 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Atep_06770 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Atep_20110 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Atep_26000 hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Atep_25990 kdsD; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Atep_25660 glycosyl transferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Atep_27770 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D Atep_01680 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Atep_27410 gmhB; D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Atep_19910 hldE; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:atep01011] D Atep_25930 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Atep_03050 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Atep_03040 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Atep_03010 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Atep_03700 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Atep_03060 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Atep_22040 dadX; alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D Atep_23400 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Atep_03000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Atep_03030 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Atep_17790 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Atep_02830 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Atep_04840 mviN; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D Atep_17760 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Atep_15340 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Atep_09540 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Atep_26180 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Atep_02980 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Atep_26210 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Atep_12810 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Atep_23950 hypothetical protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Atep_10110 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Atep_27540 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Atep_19090 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB D Atep_12410 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D Atep_04710 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Atep_24900 murein hydrolase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Atep_06710 mltD; lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Atep_14860 hypothetical protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Atep_21640 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Atep_28060 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Atep_19080 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Atep_26200 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Atep_18250 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Atep_18660 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:atep01004] D Atep_21680 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Atep_21690 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Atep_21650 fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Atep_16970 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_16980 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_21670 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Atep_18300 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Atep_22700 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Atep_21400 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Atep_15040 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Atep_03360 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Atep_02710 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Atep_19360 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Atep_21700 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Atep_17310 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Atep_27420 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:atep01008] D Atep_17640 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:atep01006] D Atep_04810 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Atep_25180 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Atep_07190 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Atep_22600 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Atep_25220 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Atep_18230 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Atep_23700 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Atep_09460 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Atep_05710 bacteriochlorophyll/chlorophyll a synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] C 01007 Amino acid related enzymes [BR:atep01007] D Atep_03880 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Atep_11470 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Atep_08090 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Atep_02820 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Atep_23990 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Atep_03770 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Atep_01180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Atep_18450 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Atep_14440 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Atep_20500 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Atep_10490 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Atep_07500 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Atep_04380 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Atep_07430 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Atep_27390 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Atep_27400 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Atep_19870 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Atep_18290 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Atep_29470 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Atep_17890 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Atep_29510 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Atep_29520 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Atep_18540 aspC; aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Atep_17770 alaC; glutamate-pyruvate aminotransferase AlaC K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D Atep_00330 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Atep_12160 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Atep_25900 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Atep_12850 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Atep_09040 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Atep_18130 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Atep_02720 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Atep_26220 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Atep_20440 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Atep_07320 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Atep_14640 serC_1; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Atep_18960 serC_2; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Atep_20210 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:atep00194] D Atep_13930 petH; ferredoxin--NADP(+) reductase K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2] D Atep_04150 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Atep_04140 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Atep_04130 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Atep_04120 atpA2; ATP synthase subunit alpha 2 K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Atep_04110 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Atep_04100 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Atep_04090 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Atep_04080 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Atep_04070 hypothetical protein K02116 atpI; ATP synthase protein I D Atep_25060 reaction center protein L chain K08928 pufL; photosynthetic reaction center L subunit D Atep_25050 photosynthetic reaction center subunit M K08929 pufM; photosynthetic reaction center M subunit D Atep_05790 photosynthetic reaction center subunit H K13991 puhA; photosynthetic reaction center H subunit D Atep_25040 hypothetical protein K13992 pufC; photosynthetic reaction center cytochrome c subunit D Atep_25000 hypothetical protein K08926 pufA; light-harvesting complex 1 alpha chain D Atep_25020 hypothetical protein K08926 pufA; light-harvesting complex 1 alpha chain D Atep_25070 light-harvesting protein B-870 alpha chain K08926 pufA; light-harvesting complex 1 alpha chain D Atep_25010 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25030 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25080 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25300 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25320 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25340 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_25360 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Atep_28450 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:atep03000] D Atep_24730 ddeI; cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Atep_11890 metR; LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Atep_15430 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D Atep_08460 oxyR; LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Atep_08520 transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Atep_27060 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Atep_08630 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Atep_08040 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D Atep_11940 fur; transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Atep_16940 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Atep_07880 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Atep_14220 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Atep_03440 vfr; cyclic AMP receptor-like protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Atep_06320 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Atep_06750 anr; transcriptional activator protein anr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Atep_28360 cyclic nucleotide-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Atep_23190 dnr; transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Atep_01540 iscR_1; HTH-type transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Atep_21490 iscR_2; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Atep_10830 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Atep_16530 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Atep_28190 birA; bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Atep_05340 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Atep_29050 fleQ; sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Atep_11090 hypothetical protein K02019 modE; molybdate transport system regulatory protein D Atep_02210 transcriptional regulator K07726 K07726; putative transcriptional regulator D Atep_24530 transcriptional regulator K07726 K07726; putative transcriptional regulator D Atep_26430 transcriptional regulator K07726 K07726; putative transcriptional regulator D Atep_12660 putative nickel-responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D Atep_29250 transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Atep_04060 spoOJ; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Atep_30840 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Atep_08690 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Atep_05120 amino acid-binding protein K03567 gcvR; glycine cleavage system transcriptional repressor D Atep_14190 gcvR; glycine cleavage system transcriptional regulator K03567 gcvR; glycine cleavage system transcriptional repressor D Atep_00910 hypothetical protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Atep_00880 algH; UPF0301 protein AlgH K07735 algH; putative transcriptional regulator D Atep_08100 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D Atep_20070 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D Atep_02950 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:atep03021] D Atep_13320 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Atep_13010 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Atep_13020 hypothetical protein K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Atep_27680 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Atep_17250 alt; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D Atep_04910 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Atep_11170 DNA-directed RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Atep_19290 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Atep_25250 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D Atep_26040 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D Atep_28860 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D Atep_22400 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D Atep_12580 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D Atep_20020 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D Atep_12960 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D Atep_02470 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D Atep_02480 hypothetical protein K03600 sspB; stringent starvation protein B D Atep_17610 hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Atep_19280 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA D Atep_19270 sigma factor AlgU regulatory protein MucB K03598 rseB; sigma-E factor negative regulatory protein RseB D Atep_19260 hypothetical protein K03803 rseC; sigma-E factor negative regulatory protein RseC D Atep_08100 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D Atep_04290 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Atep_09560 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:atep03019] D Atep_04430 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] D Atep_24780 cafA; axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-] D Atep_19210 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D Atep_19410 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Atep_27320 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Atep_09580 hypothetical protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Atep_01000 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Atep_01630 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Atep_15600 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Atep_06790 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Atep_12630 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Atep_09560 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D Atep_08710 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Atep_08830 hypothetical protein K04043 dnaK; molecular chaperone DnaK D Atep_01440 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Atep_03800 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Atep_18220 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D Atep_04540 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Atep_27270 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Atep_02880 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Atep_17870 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D Atep_18060 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A D Atep_26080 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ D Atep_20190 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D Atep_15160 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:atep03011] D Atep_00550 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Atep_15860 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Atep_22560 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Atep_13140 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Atep_13310 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Atep_13250 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Atep_14230 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Atep_13040 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Atep_13220 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Atep_01850 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Atep_13070 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Atep_13300 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Atep_13030 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Atep_13290 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Atep_13210 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Atep_12620 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Atep_11770 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Atep_13170 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Atep_14240 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Atep_13120 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Atep_04850 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Atep_17280 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Atep_12980 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Atep_13110 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Atep_13080 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Atep_13090 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D Atep_13200 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Atep_13230 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Atep_14260 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Atep_12990 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Atep_12970 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Atep_13000 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Atep_01840 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Atep_13180 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Atep_13270 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Atep_13150 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Atep_13330 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Atep_13240 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Atep_11800 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Atep_29500 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Atep_07200 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Atep_13130 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Atep_13100 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Atep_13190 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Atep_07210 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Atep_00760 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Atep_13160 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Atep_13260 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Atep_00530 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Atep_21710 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Atep_00750 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Atep_29930 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Atep_29490 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Atep_23100 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Atep_r00060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Atep_r00090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Atep_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:atep03009] D Atep_19210 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D Atep_27320 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Atep_19200 era; GTPase Era K03595 era; GTPase D Atep_07220 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D Atep_08100 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D Atep_12580 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D Atep_20020 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D Atep_12960 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D Atep_16730 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Atep_12240 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Atep_24630 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Atep_26400 ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Atep_00780 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Atep_04040 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Atep_02960 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Atep_02940 yraL; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Atep_19400 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Atep_13630 rlmE; ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Atep_24800 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Atep_12350 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Atep_09770 rlmL; ribosomal RNA large subunit methyltransferase K/L K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D Atep_07460 rlmN; dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Atep_15130 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Atep_23960 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Atep_04440 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Atep_05100 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Atep_18690 rluE; pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D Atep_28010 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Atep_14320 rimK; putative alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Atep_11780 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D Atep_07680 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Atep_05410 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Atep_21480 prmB; 50S ribosomal protein L3 glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D Atep_04430 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] D Atep_24780 cafA; axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-] D Atep_00890 putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Atep_01630 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Atep_13350 ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D Atep_20590 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Atep_07400 der; GTPase Der K03977 engA; GTPase D Atep_18210 hflX; GTPase HflX K03665 hflX; GTPase D Atep_15420 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Atep_27670 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Atep_12600 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Atep_12570 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D Atep_17520 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D Atep_18930 ybeY; endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D Atep_15830 RNA-binding protein K07574 yhbY; RNA-binding protein D Atep_01470 UPF0307 protein K09889 yjgA; ribosome-associated protein D Atep_26050 yfiA-2; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D Atep_10530 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase D Atep_21720 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:atep03016] D Atep_08900 hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Atep_18340 cca; multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Atep_03880 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Atep_18290 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Atep_14440 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Atep_10490 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Atep_18450 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Atep_11470 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Atep_01180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Atep_07500 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Atep_04380 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Atep_17890 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Atep_29470 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Atep_19870 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Atep_03770 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Atep_20500 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Atep_07430 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Atep_29510 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Atep_29520 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Atep_02820 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Atep_23990 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Atep_02300 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Atep_00390 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Atep_24480 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Atep_13710 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Atep_19610 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Atep_12610 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Atep_06830 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Atep_15420 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Atep_18230 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Atep_29890 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Atep_00680 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Atep_29920 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Atep_09080 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D Atep_28600 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Atep_07520 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D Atep_23590 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D Atep_27390 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Atep_27400 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Atep_08090 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Atep_24100 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Atep_07730 tRNA-dihydrouridine(20/20a) synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Atep_05350 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Atep_18950 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Atep_03740 hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Atep_04550 cmoA; carboxy-S-adenosyl-L-methionine synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Atep_04560 cmoB; tRNA U34 carboxymethyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D Atep_11790 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Atep_01520 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D Atep_01730 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Atep_19930 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Atep_00620 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Atep_25580 transcriptional regulator K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Atep_14740 dsrH; multidrug MFS transporter K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Atep_14730 dsrF; sulfurtransferase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D Atep_14720 dsrE; sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Atep_00230 hypothetical protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Atep_17220 tusE; sulfurtransferase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Atep_09900 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D Atep_07510 tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D Atep_28150 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Atep_28420 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Atep_28430 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Atep_16960 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Atep_28440 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Atep_20580 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Atep_08290 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Atep_05220 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Atep_04020 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Atep_23050 tmcA; tRNA(Met) cytidine acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D Atep_11710 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Atep_17290 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Atep_18260 yjeE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Atep_11350 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Atep_19410 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Atep_12630 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Atep_23670 vapC_5; ribonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Atep_27730 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:atep03012] D Atep_12590 hypothetical protein K02519 infB; translation initiation factor IF-2 D Atep_29480 hypothetical protein K02520 infC; translation initiation factor IF-3 D Atep_24140 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Atep_22570 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D Atep_12940 tuf_1; elongation factor Tu K02358 tuf; elongation factor Tu D Atep_13060 tuf_2; elongation factor Tu K02358 tuf; elongation factor Tu D Atep_13050 fusA; elongation factor G K02355 fusA; elongation factor G D Atep_23820 elongation factor G K02355 fusA; elongation factor G D Atep_27530 fusA1; elongation factor G 1 K02355 fusA; elongation factor G D Atep_23150 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Atep_22590 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor D Atep_12470 hemK; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Atep_23090 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Atep_08140 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Atep_22740 efp; elongation factor P K02356 efp; elongation factor P D Atep_22750 epmA; elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D Atep_07490 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D Atep_09510 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:atep03110] D Atep_16260 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Atep_08470 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Atep_21440 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Atep_27640 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Atep_21530 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D Atep_08710 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Atep_08830 hypothetical protein K04043 dnaK; molecular chaperone DnaK D Atep_01440 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Atep_03800 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Atep_08720 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Atep_10630 cbpA_1; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D Atep_18620 cbpA_2; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D Atep_01550 hscB; co-chaperone protein HscB K04082 hscB; molecular chaperone HscB D Atep_16320 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33 D Atep_08700 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE D Atep_01090 hspA-1; molecular chaperone K13993 HSP20; HSP20 family protein D Atep_10610 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein D Atep_10620 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein D Atep_21550 heat-shock protein IbpA K04080 ibpA; molecular chaperone IbpA D Atep_16040 hslR; heat-shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D Atep_01450 groS_1; 10 kDa chaperonin K04078 groES; chaperonin GroES D Atep_03790 groS_2; 10 kDa chaperonin K04078 groES; chaperonin GroES D Atep_12800 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_19250 mucD; serine protease MucD K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_28100 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Atep_09490 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Atep_10660 ftsH_2; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Atep_13640 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Atep_04080 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Atep_01750 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Atep_26320 transporter K09796 pccA; periplasmic copper chaperone A D Atep_28390 hypA; putative hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Atep_02110 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Atep_07590 chaperone TorD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Atep_11230 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Atep_08510 ppiB; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Atep_21410 ppiD; peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Atep_15410 peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Atep_22310 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Atep_05240 surA; chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Atep_09570 trxA; thioredoxin K03671 TXN; thioredoxin D Atep_10860 hypothetical protein K03671 TXN; thioredoxin D Atep_21510 thioredoxin K03671 TXN; thioredoxin D Atep_28380 hypothetical protein K03671 TXN; thioredoxin D Atep_04260 thiol reductase thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D Atep_04250 co-chaperone YbbN K05838 ybbN; putative thioredoxin D Atep_16050 grxC; glutaredoxin-3 K03676 grxC; glutaredoxin 3 D Atep_09070 glutaredoxin K07390 grxD; monothiol glutaredoxin D Atep_25270 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Atep_31330 hypothetical protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Atep_11120 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D Atep_25260 hypothetical protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D Atep_06500 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Atep_21940 dsbD_2; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D Atep_09680 ccmG; thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:atep04131] D Atep_07470 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Atep_10780 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Atep_07010 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Atep_06990 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Atep_21530 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:atep03051] D Atep_21530 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:atep03032] D Atep_06730 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Atep_24730 ddeI; cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Atep_21420 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D Atep_29530 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D Atep_15870 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D Atep_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Atep_14270 hypothetical protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Atep_17260 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Atep_27510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Atep_11600 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Atep_00020 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Atep_18310 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Atep_23070 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Atep_21620 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Atep_03370 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Atep_06740 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Atep_00420 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Atep_22840 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Atep_17060 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Atep_22330 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Atep_03830 site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_19650 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_31460 site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_15970 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D Atep_18970 hypothetical protein K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Atep_27440 hypothetical protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Atep_18330 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Atep_04830 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Atep_12310 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Atep_30140 topB; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:atep03036] D Atep_19700 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Atep_21170 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Atep_24340 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Atep_24730 ddeI; cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Atep_19210 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D Atep_28160 hypothetical protein K03746 hns; DNA-binding protein H-NS D Atep_30210 hypothetical protein K03746 hns; DNA-binding protein H-NS D Atep_21420 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D Atep_29530 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D Atep_15870 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D Atep_10630 cbpA_1; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D Atep_18620 cbpA_2; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D Atep_10640 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM D Atep_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Atep_21340 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D Atep_05340 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Atep_18220 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D Atep_08630 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Atep_17140 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein D Atep_23980 segregation and condensation protein A K05896 scpA; segregation and condensation protein A D Atep_23970 hypothetical protein K06024 scpB; segregation and condensation protein B D Atep_03080 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D Atep_06800 hypothetical protein K05589 ftsB; cell division protein FtsB D Atep_28520 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Atep_02980 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Atep_21310 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Atep_02970 hypothetical protein K03586 ftsL; cell division protein FtsL D Atep_03070 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D Atep_03020 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D Atep_28530 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Atep_03090 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Atep_22340 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D Atep_28640 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D Atep_28650 TIGR02449 family protein K09892 zapB; cell division protein ZapB D Atep_03210 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD D Atep_08130 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D Atep_18250 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Atep_05040 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_06170 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_25790 MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_27930 RND transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_00380 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Atep_00370 minD; site-determining protein K03609 minD; septum site-determining protein MinD D Atep_00360 hypothetical protein K03608 minE; cell division topological specificity factor D Atep_26150 envB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D Atep_26160 mreC; cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Atep_26170 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Atep_26190 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Atep_04050 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D Atep_04320 hypothetical protein K03496 parA; chromosome partitioning protein D Atep_22900 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D Atep_30380 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Atep_04060 spoOJ; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Atep_30840 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Atep_18330 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Atep_04830 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Atep_00680 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Atep_04040 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Atep_20280 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D Atep_06480 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Atep_11280 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D Atep_18440 iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D Atep_28730 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:atep03400] D Atep_06470 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Atep_12480 phr; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Atep_11520 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Atep_19370 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Atep_06230 nth_1; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Atep_03150 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Atep_27370 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Atep_18580 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Atep_01580 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Atep_21590 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Atep_01460 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Atep_22330 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Atep_17060 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Atep_00260 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D Atep_18550 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D Atep_17990 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D Atep_00570 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Atep_13010 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Atep_13020 hypothetical protein K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Atep_13320 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Atep_27680 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Atep_11970 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Atep_15280 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Atep_18240 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Atep_11810 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Atep_24130 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Atep_04820 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Atep_11600 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Atep_00020 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Atep_18310 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Atep_23070 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Atep_21620 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Atep_03370 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Atep_06740 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Atep_00420 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Atep_27510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Atep_03830 site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_19650 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_31460 site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_01060 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Atep_27800 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Atep_01050 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Atep_05600 recD2; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Atep_17910 recA; protein RecA K03553 recA; recombination protein RecA D Atep_03250 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Atep_08860 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Atep_03240 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Atep_01190 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Atep_15540 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Atep_00030 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Atep_24890 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Atep_27520 ATPase AAA K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Atep_19190 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Atep_00400 recR; recombination protein RecR K06187 recR; recombination protein RecR D Atep_08670 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Atep_16360 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D Atep_23480 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D Atep_29590 cas1-2; CRISPR-associated endonuclease Cas1 2 K15342 cas1; CRISP-associated protein Cas1 D Atep_30700 cas1-1; CRISPR-associated endonuclease Cas1 1 K15342 cas1; CRISP-associated protein Cas1 D Atep_31620 hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D Atep_18970 hypothetical protein K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Atep_27440 hypothetical protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Atep_12310 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Atep_21420 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D Atep_05340 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Atep_29530 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D Atep_15870 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D Atep_15600 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Atep_28160 hypothetical protein K03746 hns; DNA-binding protein H-NS D Atep_30210 hypothetical protein K03746 hns; DNA-binding protein H-NS D Atep_17900 recX; regulatory protein RecX K03565 recX; regulatory protein D Atep_16990 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D Atep_15510 yoaA; helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Atep_15680 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Atep_15770 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:atep03029] D Atep_02450 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Atep_12590 hypothetical protein K02519 infB; translation initiation factor IF-2 D Atep_29480 hypothetical protein K02520 infC; translation initiation factor IF-3 D Atep_22570 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D Atep_12940 tuf_1; elongation factor Tu K02358 tuf; elongation factor Tu D Atep_13060 tuf_2; elongation factor Tu K02358 tuf; elongation factor Tu D Atep_13050 fusA; elongation factor G K02355 fusA; elongation factor G D Atep_23820 elongation factor G K02355 fusA; elongation factor G D Atep_27530 fusA1; elongation factor G 1 K02355 fusA; elongation factor G D Atep_19200 era; GTPase Era K03595 era; GTPase D Atep_02820 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Atep_10490 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Atep_04380 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Atep_01180 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Atep_26120 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Atep_24740 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Atep_26130 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Atep_27510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Atep_22670 opr86; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D Atep_08710 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Atep_08830 hypothetical protein K04043 dnaK; molecular chaperone DnaK D Atep_08700 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE D Atep_01440 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Atep_03800 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Atep_01450 groS_1; 10 kDa chaperonin K04078 groES; chaperonin GroES D Atep_03790 groS_2; 10 kDa chaperonin K04078 groES; chaperonin GroES D Atep_08720 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Atep_01550 hscB; co-chaperone protein HscB K04082 hscB; molecular chaperone HscB D Atep_09070 glutaredoxin K07390 grxD; monothiol glutaredoxin D Atep_11280 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D Atep_18440 iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D Atep_29900 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Atep_26310 hypothetical protein K07152 SCO1; protein SCO1 D Atep_21530 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:atep02000] D Atep_20130 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Atep_15710 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Atep_04400 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Atep_26880 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D Atep_11750 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Atep_11760 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Atep_23750 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D Atep_06330 uup; heme ABC transporter ATPase K15738 uup; ABC transport system ATP-binding/permease protein D Atep_11070 modA_1; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Atep_11080 modA_2; molybdate-binding periplasmic protein ModA K02020 modA; molybdate transport system substrate-binding protein D Atep_11050 modB; molybdenum transporter ModB K02018 modB; molybdate transport system permease protein D Atep_11040 modD; molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Atep_13820 potF; putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein D Atep_13790 putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein D Atep_13800 putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D Atep_13810 polyamine-transporting ATPase K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D Atep_24500 iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein D Atep_24490 ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D Atep_25960 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Atep_25970 yrbE; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Atep_25980 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Atep_25950 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D Atep_25940 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D Atep_06650 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Atep_11180 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Atep_06660 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D Atep_06670 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D Atep_06680 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Atep_18370 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Atep_17620 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Atep_21390 hbpA; ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Atep_21380 oppB; peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D Atep_21370 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Atep_21360 dppF; ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Atep_22020 cobalamin ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Atep_26990 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Atep_22010 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D Atep_27000 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D Atep_15560 putative ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Atep_22000 ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Atep_27010 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Atep_11840 cation ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D Atep_16930 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D Atep_16920 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Atep_12740 hypothetical protein K02008 cbiQ; cobalt/nickel transport system permease protein D Atep_12760 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Atep_12730 cbiO; cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Atep_12770 lipoprotein K10094 cbiK; nickel transport protein D Atep_12750 hypothetical protein K16915 cbiL; nickel transport protein D Atep_15570 scbA; adhesin K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Atep_15550 hypothetical protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Atep_26850 transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein D Atep_27570 putative O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein D Atep_26750 sugar ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Atep_27580 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Atep_16070 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D Atep_23540 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D Atep_26030 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Atep_01610 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein D Atep_29420 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein D Atep_01620 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D Atep_29430 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D Atep_01600 hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component D Atep_01340 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein D Atep_01350 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Atep_09710 hypothetical protein K02196 ccmD; heme exporter protein D D Atep_09720 ccmC; heme export protein K02195 ccmC; heme exporter protein C D Atep_09750 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B D Atep_09760 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Atep_28530 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Atep_28520 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Atep_29320 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Atep_15330 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Atep_15320 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Atep_29310 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Atep_00050 permease K02004 ABC.CD.P; putative ABC transport system permease protein D Atep_10040 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D Atep_11860 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D Atep_15020 inner membrane transport permease K02004 ABC.CD.P; putative ABC transport system permease protein D Atep_00060 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Atep_10050 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Atep_11850 methionine ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Atep_15030 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Atep_04600 ynhD; ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D Atep_17690 MFS metabolite transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Atep_25280 MFS transporter K08226 pucC; MFS transporter, BCD family, chlorophyll transporter D Atep_16300 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Atep_26110 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Atep_02890 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Atep_26100 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Atep_26090 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Atep_26060 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Atep_00280 hypothetical protein K10716 kch; voltage-gated potassium channel D Atep_13470 amtB; ammonium transporter K03320 amt; ammonium transporter, Amt family D Atep_02470 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D Atep_10140 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D Atep_10130 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D Atep_10150 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D Atep_21770 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D Atep_21780 batA; VWR domain protein in aerotolerance operon BatA K07114 yfbK; Ca-activated chloride channel homolog D Atep_18070 putative membrane protein K19416 yccA; modulator of FtsH protease D Atep_20860 kefA; potassium transporter K05802 mscK; potassium-dependent mechanosensitive channel D Atep_08500 mgtE; magnesium transporter MgtE K06213 mgtE; magnesium transporter D Atep_25750 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D Atep_28810 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D Atep_29080 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D Atep_25760 motB_1; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D Atep_28800 motB_2; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D Atep_29090 hypothetical protein K02557 motB; chemotaxis protein MotB D Atep_20150 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D Atep_26970 hypothetical protein K03561 exbB; biopolymer transport protein ExbB D Atep_20140 hypothetical protein K03559 exbD; biopolymer transport protein ExbD D Atep_26950 biopolymer transporter protein ExbD K03559 exbD; biopolymer transport protein ExbD D Atep_26960 hypothetical protein K03559 exbD; biopolymer transport protein ExbD D Atep_29170 Tol-Pal system subunit TolQ K03562 tolQ; biopolymer transport protein TolQ D Atep_29180 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D Atep_04570 crcB; putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter D Atep_16350 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Atep_15290 OmpA/MotB domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Atep_08190 aromatic hydrocarbon degradation protein K06076 fadL; long-chain fatty acid transport protein D Atep_12920 hypothetical protein K06076 fadL; long-chain fatty acid transport protein D Atep_01430 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D Atep_03950 outer membrane receptor FepA K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D Atep_26980 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Atep_17670 hypothetical protein K12340 tolC; outer membrane protein D Atep_22670 opr86; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D Atep_07410 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D Atep_09410 lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D Atep_05090 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D Atep_11930 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE D Atep_17090 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA D Atep_17100 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D Atep_26020 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D Atep_26010 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D Atep_05250 lptD; LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D Atep_10500 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D Atep_28500 hypothetical protein K20543 bcsC; cellulose synthase operon protein C D Atep_18920 ion transporter K06189 corC; hemolysin (HlyC) family protein D Atep_11130 czcD.1; cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Atep_00070 fieF; ferrous-iron efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF D Atep_05030 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D Atep_06160 multidrug transporter K18138 acrB; multidrug efflux pump D Atep_25780 vmeB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D Atep_27940 acrF; transporter K18138 acrB; multidrug efflux pump D Atep_18100 sugE; multidrug transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D Atep_28340 transporter K03304 tehA; tellurite resistance protein D Atep_16950 hypothetical protein K07301 yrbG; cation:H+ antiporter D Atep_02260 cation acetate symporter K14393 actP; cation/acetate symporter D Atep_09820 actP; cation acetate symporter K14393 actP; cation/acetate symporter D Atep_17420 nhaP2; K(+)/H(+) antiporter NhaP2 K11105 cvrA; potassium/hydrogen antiporter D Atep_20880 potassium efflux system protein K03455 KEA1_2_3; K+:H+ antiporter D Atep_00220 trkH_1; Trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D Atep_12190 trkH_2; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein D Atep_12200 trkA; potassium transporter inner membrane associated protein K03499 trkA; trk/ktr system potassium uptake protein D Atep_24930 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D Atep_27190 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D Atep_10780 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Atep_10800 arsenical-resistance protein K03325 ACR3; arsenite transporter D Atep_28280 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D Atep_28270 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D Atep_28260 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D Atep_28250 monovalent cation/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D Atep_28240 monovalent cation/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D Atep_28230 hypothetical protein K05564 phaG; multicomponent K+:H+ antiporter subunit G D Atep_16470 hypothetical protein K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Atep_16430 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Atep_16520 hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Atep_16510 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Atep_16500 cation:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Atep_04840 mviN; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D Atep_07930 mdcF; transporter K13936 mdcF; malonate transporter and related proteins D Atep_22790 AI-2E family transporter K03548 perM; putative permease D Atep_06520 membrane protein K09125 yhhQ; queuosine precursor transporter D Atep_03020 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D Atep_00870 tonB; cell envelope biogenesis protein TonB K03832 tonB; periplasmic protein TonB D Atep_26940 hypothetical protein K03832 tonB; periplasmic protein TonB D Atep_29210 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D Atep_29200 tolB; protein TolB K03641 tolB; TolB protein D Atep_07150 hppA; K(+)-insensitive pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Atep_10850 dsbD_1; cytochrome C biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D Atep_26870 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D Atep_05040 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_06170 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_25790 MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_27930 RND transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_01160 hypothetical protein K04758 feoA; ferrous iron transport protein A D Atep_28310 iron transporter FeoA K04758 feoA; ferrous iron transport protein A D Atep_28320 hypothetical protein K04758 feoA; ferrous iron transport protein A D Atep_01150 feoB_1; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Atep_28300 feoB_2; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Atep_09690 ccmF; c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Atep_10940 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:atep02044] D Atep_17670 hypothetical protein K12340 tolC; outer membrane protein D Atep_26880 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D Atep_26870 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D Atep_08480 gspA; ATPase AAA K02450 gspA; general secretion pathway protein A D Atep_16830 hypothetical protein K02450 gspA; general secretion pathway protein A D Atep_08490 hypothetical protein K02451 gspB; general secretion pathway protein B D Atep_03600 xpsD; type II secretion system protein D K02453 gspD; general secretion pathway protein D D Atep_01130 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Atep_01830 xpsE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Atep_31340 etpE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Atep_03490 xpsF; type II secretion system protein F K02455 gspF; general secretion pathway protein F D Atep_03500 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D Atep_03510 xpsH; type II secretion system protein H K02457 gspH; general secretion pathway protein H D Atep_03520 hypothetical protein K02458 gspI; general secretion pathway protein I D Atep_03530 hypothetical protein K02459 gspJ; general secretion pathway protein J D Atep_03540 pefK; type II secretion system protein K K02460 gspK; general secretion pathway protein K D Atep_03570 hypothetical protein K02461 gspL; general secretion pathway protein L D Atep_03580 hypothetical protein K02462 gspM; general secretion pathway protein M D Atep_03590 hypothetical protein K02463 gspN; general secretion pathway protein N D Atep_03320 type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Atep_01280 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Atep_03340 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Atep_03330 pilC; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D Atep_23910 pilE; type IV minor pilin protein PilE K02655 pilE; type IV pilus assembly protein PilE D Atep_07450 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D Atep_00830 pilG; protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D Atep_00820 hypothetical protein K02658 pilH; twitching motility two-component system response regulator PilH D Atep_00810 pilI; pilus biogenesis protein K02659 pilI; twitching motility protein PilI D Atep_00800 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D Atep_00490 pilM; fimbrial assembly protein K02662 pilM; type IV pilus assembly protein PilM D Atep_00480 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN D Atep_00470 pilO; type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D Atep_00460 pilP; fimbrial protein K02665 pilP; type IV pilus assembly protein PilP D Atep_00450 pilQ; pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ D Atep_06010 pilT; twitching mobility protein K02669 pilT; twitching motility protein PilT D Atep_06000 pilU_1; twitching motility protein PilU K02670 pilU; twitching motility protein PilU D Atep_13520 pilU_2; twitching motility protein PilU K02670 pilU; twitching motility protein PilU D Atep_13530 uptC; twitching motility protein PilT K02670 pilU; twitching motility protein PilU D Atep_23870 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D Atep_23880 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D Atep_23890 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D Atep_23900 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D Atep_21610 pilZ; type 4 fimbrial biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Atep_23860 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D Atep_19620 hypothetical protein K08086 fimV; pilus assembly protein FimV D Atep_28560 hypothetical protein K02221 yggT; YggT family protein D Atep_01370 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Atep_28890 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Atep_28900 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Atep_23390 flagellar protein FlhB K04061 flhB2; flagellar biosynthesis protein D Atep_29030 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D Atep_29010 hypothetical protein K02411 fliH; flagellar assembly protein FliH D Atep_29000 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Atep_28950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Atep_28940 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Atep_28930 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Atep_28920 fliQ; flagellar export apparatus protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Atep_28910 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Atep_31200 conjugal transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF D Atep_31170 hypothetical protein K12058 traN; conjugal transfer mating pair stabilization protein TraN D Atep_31160 traU; conjugal transfer protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU D Atep_31150 hypothetical protein K12061 traW; conjugal transfer pilus assembly protein TraW D Atep_31120 hypothetical protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI D Atep_31140 hypothetical protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI D Atep_31110 traC; conjugal transfer protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC D Atep_31090 hypothetical protein K12064 traV; conjugal transfer pilus assembly protein TraV D Atep_31080 traB; conjugative transfer factor, TraB K12065 traB; conjugal transfer pilus assembly protein TraB D Atep_31070 hypothetical protein K12066 traK; conjugal transfer pilus assembly protein TraK D Atep_31060 hypothetical protein K12067 traE; conjugal transfer pilus assembly protein TraE D Atep_31050 hypothetical protein K12068 traL; conjugal transfer pilus assembly protein TraL D Atep_31100 hypothetical protein K12069 traA; conjugal transfer pilus assembly protein TraA D Atep_06500 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Atep_31210 hypothetical protein K12072 traH; conjugative transfer pilus assembly protein TraH D Atep_03890 hypothetical protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Atep_10060 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Atep_03130 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Atep_01750 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Atep_15080 secD-1; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D Atep_12950 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Atep_15070 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Atep_09250 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D Atep_13280 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Atep_12420 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Atep_28510 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D Atep_15090 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D Atep_29900 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Atep_24810 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D Atep_24820 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D Atep_24690 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:atep02042] D Atep_16350 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:atep02022] D Atep_15880 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Atep_15890 phoB_2; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Atep_04490 phoB_1; response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Atep_00140 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D Atep_28110 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D Atep_08270 hypothetical protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Atep_08280 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Atep_12450 hypothetical protein K08083 algR; two-component system, LytTR family, response regulator AlgR D Atep_26490 ntrB; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Atep_26500 ntrC; sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Atep_12220 two-component sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Atep_12210 ntrX; sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D Atep_11340 sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D Atep_14660 pilR; type 4 fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D Atep_11330 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Atep_11990 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_16150 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_28830 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_06190 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_11980 transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_16760 cheY-1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_28850 cheY; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_12040 cheB1_1; chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_16170 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_28820 cheB1_2; chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_07830 chemotaxis protein CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Atep_26360 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Atep_23340 cheV; chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Atep_00790 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Atep_00830 pilG; protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D Atep_00820 hypothetical protein K02658 pilH; twitching motility two-component system response regulator PilH D Atep_22770 hypothetical protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH D Atep_22230 hypothetical protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Atep_18360 hypothetical protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D Atep_05980 hypothetical protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D Atep_04030 hypothetical protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Atep_07850 hypothetical protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Atep_08260 hypothetical protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:atep02035] D Atep_11990 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_16150 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_28830 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Atep_12000 cheW-2_1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D Atep_16120 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D Atep_28790 cheW-2_2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D Atep_13690 cheC; CheY-P-specific phosphatase CheC K03410 cheC; chemotaxis protein CheC D Atep_12020 cheD1_1; putative chemoreceptor glutamine deamidase CheD 1 K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Atep_16780 cheD1_2; putative chemoreceptor glutamine deamidase CheD 1 K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Atep_12010 cheR_1; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Atep_16160 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Atep_23330 cheR_2; chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Atep_12040 cheB1_1; chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_16170 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_28820 cheB1_2; chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Atep_07830 chemotaxis protein CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Atep_26360 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Atep_06190 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_11980 transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_16760 cheY-1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_28850 cheY; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Atep_28840 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D Atep_23340 cheV; chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Atep_00700 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_05000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_05970 tsr; chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_08330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_08570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_11190 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_12030 mcp; chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_16180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_16750 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_16810 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_27490 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_29390 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D Atep_10300 aer-2; aerotaxis receptor K03776 aer; aerotaxis receptor D Atep_29010 hypothetical protein K02411 fliH; flagellar assembly protein FliH D Atep_29000 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Atep_28990 hypothetical protein K02413 fliJ; flagellar protein FliJ D Atep_28940 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D Atep_28930 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Atep_28920 fliQ; flagellar export apparatus protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Atep_28910 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Atep_28890 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Atep_28900 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Atep_29020 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Atep_28960 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Atep_28950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Atep_29030 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D Atep_23250 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Atep_23350 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Atep_23260 flgH; flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Atep_12060 hypothetical protein K02415 fliL; flagellar protein FliL D Atep_28970 hypothetical protein K02415 fliL; flagellar protein FliL D Atep_29040 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Atep_28980 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D Atep_23320 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Atep_23310 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Atep_23300 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D Atep_23280 flgF; flagellar basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Atep_23270 flgG; flagellar basal-body rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG D Atep_23240 flgJ; peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Atep_23290 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D Atep_23230 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D Atep_23220 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D Atep_23370 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D Atep_21220 hypothetical protein K02406 fliC; flagellin D Atep_21240 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D Atep_21250 fliS; B-type flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Atep_27920 hypothetical protein K02423 fliT; flagellar protein FliT D Atep_28860 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D Atep_25750 flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D Atep_28810 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D Atep_29080 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D Atep_25760 motB_1; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D Atep_28800 motB_2; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D Atep_29090 hypothetical protein K02557 motB; chemotaxis protein MotB D Atep_29050 fleQ; sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Atep_16700 hypothetical protein K13626 fliW; flagellar assembly factor FliW D Atep_23360 flagellar biosynthesis protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Atep_21230 hypothetical protein K06603 flaG; flagellar protein FlaG D Atep_28880 flhF; flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF D Atep_04300 site-determining protein K04562 flhG; flagellar biosynthesis protein FlhG D Atep_28870 fleN; cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Atep_00830 pilG; protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D Atep_00820 hypothetical protein K02658 pilH; twitching motility two-component system response regulator PilH D Atep_00810 pilI; pilus biogenesis protein K02659 pilI; twitching motility protein PilI D Atep_00800 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D Atep_00790 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Atep_14660 pilR; type 4 fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D Atep_06010 pilT; twitching mobility protein K02669 pilT; twitching motility protein PilT D Atep_06000 pilU_1; twitching motility protein PilU K02670 pilU; twitching motility protein PilU D Atep_13520 pilU_2; twitching motility protein PilU K02670 pilU; twitching motility protein PilU D Atep_13530 uptC; twitching motility protein PilT K02670 pilU; twitching motility protein PilU D Atep_22770 hypothetical protein K11523 pixH; two-component system, chemotaxis family, response regulator PixH D Atep_01280 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Atep_03340 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Atep_03330 pilC; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D Atep_03320 type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Atep_07450 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D Atep_00450 pilQ; pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ D Atep_00460 pilP; fimbrial protein K02665 pilP; type IV pilus assembly protein PilP D Atep_00470 pilO; type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D Atep_00480 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN D Atep_00490 pilM; fimbrial assembly protein K02662 pilM; type IV pilus assembly protein PilM D Atep_21610 pilZ; type 4 fimbrial biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Atep_23870 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D Atep_23880 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D Atep_23890 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D Atep_23900 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D Atep_23910 pilE; type IV minor pilin protein PilE K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:atep04812] D Atep_04690 MEMO1 family protein K06990 MEMO1; MEMO1 family protein D Atep_26150 envB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D Atep_30170 hypothetical protein K18640 parM; plasmid segregation protein ParM D Atep_03090 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Atep_03080 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D Atep_00380 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Atep_00370 minD; site-determining protein K03609 minD; septum site-determining protein MinD D Atep_00360 hypothetical protein K03608 minE; cell division topological specificity factor D Atep_04050 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D Atep_04320 hypothetical protein K03496 parA; chromosome partitioning protein D Atep_22900 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D Atep_30380 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Atep_04060 spoOJ; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Atep_30840 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:atep04147] D Atep_21530 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D Atep_06790 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Atep_07010 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Atep_07000 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Atep_06990 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Atep_01440 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Atep_03800 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Atep_08710 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Atep_08830 hypothetical protein K04043 dnaK; molecular chaperone DnaK D Atep_27050 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Atep_24120 hypothetical protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Atep_12940 tuf_1; elongation factor Tu K02358 tuf; elongation factor Tu D Atep_13060 tuf_2; elongation factor Tu K02358 tuf; elongation factor Tu D Atep_00390 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Atep_19360 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Atep_02370 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Atep_07100 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Atep_21520 adK; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Atep_09520 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Atep_13430 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Atep_23200 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Atep_24440 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Atep_26470 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Atep_01010 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Atep_05500 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Atep_12140 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Atep_05330 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Atep_05180 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Atep_27220 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Atep_09240 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:atep02048] D Atep_23480 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D Atep_29590 cas1-2; CRISPR-associated endonuclease Cas1 2 K15342 cas1; CRISP-associated protein Cas1 D Atep_30700 cas1-1; CRISPR-associated endonuclease Cas1 1 K15342 cas1; CRISP-associated protein Cas1 D Atep_31620 hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D Atep_23490 cas2-2; type I-E CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Atep_23410 cas3; CRISPR-associated endonuclease/helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Atep_31560 type I-F CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Atep_23420 cse1; CRISPR-associated protein CasA/Cse1 K19123 casA; CRISPR system Cascade subunit CasA D Atep_23430 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB D Atep_23440 type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC D Atep_23450 type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD D Atep_23460 cse3; CRISPR-associated endoribonuclease Cse3 K19126 casE; CRISPR system Cascade subunit CasE D Atep_31580 hypothetical protein K19128 csy2; CRISPR-associated protein Csy2 D Atep_31590 CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3 D Atep_30510 type III-B CRISPR module RAMP protein Cmr1 K07061 cmr1; CRISPR-associated protein Cmr1 D Atep_30520 type III-B CRISPR-associated protein Cas10/Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2 D Atep_30530 CRISPR-associated protein Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3 D Atep_30540 type III-B CRISPR module RAMP protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4 D Atep_30550 hypothetical protein K19141 cmr5; CRISPR-associated protein Cmr5 D Atep_30560 type III-B CRISPR module RAMP protein Cmr6 K19142 cmr6; CRISPR-associated protein Cmr6 D Atep_30680 hypothetical protein K19145 csx16; CRISPR-associated protein Csx16 D Atep_00200 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Atep_06530 hsdR2; type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Atep_00180 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Atep_06560 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Atep_00170 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Atep_06610 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Atep_03830 site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_19650 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_31460 site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Atep_05390 restriction endonuclease subunit M K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Atep_24730 ddeI; cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Atep_07250 res; type III restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5] D Atep_07280 hypothetical protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Atep_17350 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Atep_25430 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Atep_04220 hypothetical protein K07172 mazE; antitoxin MazE D Atep_25120 toxin RelE K06218 relE; mRNA interferase RelE/StbE D Atep_22180 RelE protein K06218 relE; mRNA interferase RelE/StbE D Atep_22190 antitoxin K18923 stbD; antitoxin StbD D Atep_14150 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Atep_27890 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Atep_14160 hypothetical protein K19159 yefM; antitoxin YefM D Atep_27880 antitoxin K19159 yefM; antitoxin YefM D Atep_01380 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Atep_08420 hipA; serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Atep_08940 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D Atep_06780 hypothetical protein K21498 higA-1; antitoxin HigA-1 D Atep_23670 vapC_5; ribonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Atep_27730 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Atep_23680 vagC; antitoxin K18829 mvpT; antitoxin VapB D Atep_02640 hypothetical protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-] D Atep_07140 vapC_2; ribonuclease VapC K07062 fitB; toxin FitB [EC:3.1.-.-] D Atep_22650 stbB; plasmid stability protein StbB K07062 fitB; toxin FitB [EC:3.1.-.-] D Atep_02630 hypothetical protein K21495 fitA; antitoxin FitA D Atep_07130 hypothetical protein K21495 fitA; antitoxin FitA D Atep_22640 stbC; antitoxin K21495 fitA; antitoxin FitA D Atep_03090 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Atep_26150 envB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D Atep_18330 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Atep_04830 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Atep_03880 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Atep_15800 hypothetical protein K19168 cptA; toxin CptA D Atep_15790 hypothetical protein K09159 cptB; antitoxin CptB D Atep_19560 hypothetical protein K19170 dndC; DNA sulfur modification protein DndC D Atep_19530 hypothetical protein K19171 dndD; DNA sulfur modification protein DndD C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:atep01504] D Atep_24850 mprF; phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D Atep_05040 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_06170 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_25790 MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_27930 RND transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Atep_05030 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D Atep_06160 multidrug transporter K18138 acrB; multidrug efflux pump D Atep_25780 vmeB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D Atep_27940 acrF; transporter K18138 acrB; multidrug efflux pump D Atep_17670 hypothetical protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:atep03100] D Atep_t00150 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Atep_t00240 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Atep_t00040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Atep_t00390 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Atep_t00460 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Atep_t00270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Atep_t00280 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Atep_t00100 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Atep_t00350 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Atep_t00410 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Atep_t00230 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Atep_t00440 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Atep_t00020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Atep_t00480 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Atep_t00140 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Atep_t00330 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Atep_t00360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Atep_t00200 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Atep_t00110 tRNA-His K14226 tRNA-His; tRNA His D Atep_t00030 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Atep_t00400 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Atep_t00470 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Atep_t00080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Atep_t00130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Atep_t00380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Atep_t00070 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Atep_t00310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Atep_t00120 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Atep_t00170 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Atep_t00180 tRNA-Met K14230 tRNA-Met; tRNA Met D Atep_t00300 tRNA-Met K14230 tRNA-Met; tRNA Met D Atep_t00490 tRNA-Met K14230 tRNA-Met; tRNA Met D Atep_t00340 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Atep_t00090 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Atep_t00060 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Atep_t00510 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Atep_t00320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Atep_t00260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Atep_t00450 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Atep_t00050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Atep_t00250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Atep_t00290 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Atep_t00210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Atep_t00220 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Atep_t00190 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Atep_t00500 tRNA-Val K14237 tRNA-Val; tRNA Val D Atep_t00420 tRNA-Val K14237 tRNA-Val; tRNA Val D Atep_t00370 tRNA-Val K14237 tRNA-Val; tRNA Val D Atep_r00060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Atep_r00090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Atep_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Atep_19750 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D Atep_13400 hypothetical protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D Atep_05950 iorA-1; indolepyruvate oxidoreductase subunit IorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Atep_05940 iorB-1; indolepyruvate oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Atep_09870 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D Atep_09880 aldehyde oxidase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D Atep_00600 oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Atep_14630 msrA; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Atep_02570 hypothetical protein K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Atep_24620 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Atep_21060 NADP oxidoreductase K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2] D Atep_21050 hydrogenase K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2] D Atep_18420 ftn; ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D Atep_12490 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Atep_10820 arsC; arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Atep_10900 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Atep_16560 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Atep_07950 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Atep_17150 AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Atep_18870 hyfB; hydrogenase 4 subunit B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D Atep_16420 hypothetical protein K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D Atep_18890 hypothetical protein K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D Atep_18900 hydrogenase 4 subunit F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D Atep_04900 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Atep_20570 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Atep_23040 hypothetical protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Atep_27310 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Atep_02850 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D Atep_18560 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D Atep_13580 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Atep_00650 tgpA; protein-glutamine gamma-glutamyltransferase K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Atep_13570 ate; putative arginyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D Atep_01920 glycosylase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320] D Atep_18430 hypothetical protein K03813 modD; molybdenum transport protein [EC:2.4.2.-] D Atep_04860 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Atep_00860 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Atep_03190 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Atep_07160 thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Atep_20970 putative phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Atep_12360 polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D Atep_20450 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Atep_15120 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D Atep_26070 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Atep_00940 hypothetical protein K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D Atep_29160 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Atep_24020 phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Atep_01220 phosphoglycerate mutase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Atep_05990 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Atep_18320 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Atep_08650 cyclic di-GMP phosphodiesterase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Atep_12090 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Atep_20890 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Atep_05130 def-2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Atep_12260 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Atep_24760 nitrilase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Atep_14870 maf-2; Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D Atep_00670 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Atep_12900 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Atep_21840 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Atep_13340 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Atep_18270 bifunctional NAD(P)H-hydrate repair enzyme K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Atep_27970 cypH; peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D Atep_20630 mpl; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D Atep_07170 hypothetical protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Atep_13880 electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Atep_15650 rsxD; electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Atep_13870 electron transport complex subunit C K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Atep_16370 hypothetical protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Atep_13850 ferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Atep_16380 electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Atep_04980 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Atep_29350 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Atep_10950 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D Atep_13890 hypothetical protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Atep_15640 electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Atep_13900 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Atep_15630 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Atep_07180 rnfA; electron transport complex subunit RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Atep_13910 electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Atep_16390 electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Atep_01660 hypothetical protein K15790 nifQ; nitrogen fixation protein NifQ D Atep_20690 tricarballylate dehydrogenase K13796 cobZ; tricarballylate dehydrogenase D Atep_08560 hypothetical protein K02448 norD; nitric oxide reductase NorD protein D Atep_08550 norQ; nitric oxide reductase NorQ protein K04748 norQ; nitric oxide reductase NorQ protein D Atep_27300 nifE; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Atep_18750 oxidoreductase K14086 echA; ech hydrogenase subunit A D Atep_18760 ech hydrogenase subunit EchB K14087 echB; ech hydrogenase subunit B D Atep_18810 NADH ubiquinone oxidoreductase K14088 echC; ech hydrogenase subunit C D Atep_18820 hypothetical protein K14089 echD; ech hydrogenase subunit D D Atep_18830 NADH dehydrogenase K14090 echE; ech hydrogenase subunit E D Atep_18840 hypothetical protein K14091 echF; ech hydrogenase subunit F D Atep_23000 hypothetical protein K02569 napC; cytochrome c-type protein NapC D Atep_14750 sulfurtransferase TusE K23077 dsrC; dissimilatory sulfite reductase related protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Atep_04760 hypothetical protein K06203 cysZ; CysZ protein D Atep_28580 UPF0001 protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Atep_08010 lapB; lipopolysaccharide assembly protein B K19804 lapB; lipopolysaccharide assembly protein B C 99987 Cofactor metabolism D Atep_27600 ubiB; putative protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D Atep_27610 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D Atep_13500 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D Atep_08760 SCP2 domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D Atep_12180 hypothetical protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D Atep_25240 alpha/beta hydrolase K06049 bchO; magnesium chelatase accessory protein C 99988 Secondary metabolism C 99999 Others D Atep_16660 GCN5 family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Atep_16280 cspD; cold-shock protein CspD K03704 cspA; cold shock protein D Atep_21320 cold-shock protein K03704 cspA; cold shock protein D Atep_13480 glnK; nitrogen regulatory protein P-II 1 K04752 glnK; nitrogen regulatory protein P-II 2 D Atep_17830 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D Atep_16270 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Atep_21460 tig; trigger factor K03545 tig; trigger factor D Atep_09230 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D Atep_24640 hypC; hydrogenase assembly protein HupF K04653 hypC; hydrogenase expression/formation protein HypC D Atep_24650 hypD2; hydrogenase expression/formation protein hypD2 K04654 hypD; hydrogenase expression/formation protein HypD D Atep_24660 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Atep_14620 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D Atep_13510 comM; ATP-dependent protease K07391 comM; magnesium chelatase family protein D Atep_03450 peroxiredoxin K07397 yhfA; putative redox protein C 99976 Replication and repair D Atep_03560 hypothetical protein K07445 K07445; putative DNA methylase D Atep_21130 hypothetical protein K07445 K07445; putative DNA methylase D Atep_08060 IS607 family transposase ISTko2 K07450 K07450; putative resolvase D Atep_16550 IS607 family transposase ISTko2 K07450 K07450; putative resolvase D Atep_21070 IS607 family transposase ISTko2 K07450 K07450; putative resolvase D Atep_26510 IS607 family transposase ISTko2 K07450 K07450; putative resolvase D Atep_29660 IS607 family transposase ISTko2 K07450 K07450; putative resolvase D Atep_30890 IS607 family transposase K07450 K07450; putative resolvase D Atep_27350 UPF0758 protein K03630 radC; DNA repair protein RadC D Atep_19890 nth_2; endonuclease III K07457 K07457; endonuclease III related protein D Atep_02920 UPF0102 protein K07460 yraN; putative endonuclease D Atep_05630 hypothetical protein K04096 smf; DNA processing protein D Atep_12280 smf; DNA processing protein DprA K04096 smf; DNA processing protein D Atep_30440 hypothetical protein K04096 smf; DNA processing protein D Atep_31640 hypothetical protein K06919 K06919; putative DNA primase/helicase D Atep_01950 transposase K07483 K07483; transposase D Atep_14420 hypothetical protein K07484 K07484; transposase D Atep_01260 IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D Atep_15150 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Atep_21180 IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D Atep_26630 transposase K07491 rayT; REP-associated tyrosine transposase D Atep_30270 transposase K07491 rayT; REP-associated tyrosine transposase D Atep_30950 transposase K07491 rayT; REP-associated tyrosine transposase D Atep_12880 hypothetical protein K07492 K07492; putative transposase D Atep_28220 hypothetical protein K07492 K07492; putative transposase D Atep_18790 hypothetical protein K07493 K07493; putative transposase D Atep_01270 ydcM_1; transposase K07496 K07496; putative transposase D Atep_05450 transposase K07496 K07496; putative transposase D Atep_09640 transposase K07496 K07496; putative transposase D Atep_21080 transposase K07496 K07496; putative transposase D Atep_21160 ydcM_2; transposase K07496 K07496; putative transposase D Atep_21190 ydcM_3; transposase K07496 K07496; putative transposase D Atep_22910 ydcM_4; transposase K07496 K07496; putative transposase D Atep_23810 transposase K07496 K07496; putative transposase D Atep_29670 transposase K07496 K07496; putative transposase D Atep_30290 hypothetical protein K07496 K07496; putative transposase D Atep_30620 transposase K07496 K07496; putative transposase D Atep_01940 hypothetical protein K07497 K07497; putative transposase D Atep_05470 integrase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Atep_00410 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Atep_22440 hypothetical protein K03307 TC.SSS; solute:Na+ symporter, SSS family D Atep_23940 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Atep_22280 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Atep_10970 nucleoside:proton symporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D Atep_16310 nucleoside:proton symporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D Atep_22290 putative intracellular septation protein A K06190 ispZ; intracellular septation protein D Atep_17650 anti-sigma factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Atep_19100 hypothetical protein K06415 spoVR; stage V sporulation protein R D Atep_01780 non-catalytic member of peptidase subfamily M23B K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D Atep_25460 stress protein K05792 terA; tellurite resistance protein TerA D Atep_25470 tellurium resistance protein TerE K05795 terD; tellurium resistance protein TerD D Atep_25520 tellurium resistance protein TerE K05795 terD; tellurium resistance protein TerD D Atep_25500 tellurium resistance protein TerZ K05791 terZ; tellurium resistance protein TerZ D Atep_30390 proQ; RNA chaperone ProQ K03607 proQ; ProP effector D Atep_31650 hypothetical protein K03607 proQ; ProP effector D Atep_12910 GTP-binding protein K06207 typA; GTP-binding protein D Atep_10540 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D Atep_18940 ATP-binding protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Atep_14180 phosphate starvation protein PhoH K07175 phoH2; PhoH-like ATPase D Atep_19120 PrkA family serine protein kinase K07180 prkA; serine protein kinase D Atep_03400 histidine kinase K07182 K07182; CBS domain-containing protein D Atep_04480 hypothetical protein K07182 K07182; CBS domain-containing protein D Atep_27590 hypothetical protein K07182 K07182; CBS domain-containing protein D Atep_06490 UPF0234 protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D Atep_21300 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein D Atep_09090 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA D Atep_20910 OmpH outer membrane protein K06142 hlpA; outer membrane protein D Atep_22680 outer membrane protein chaperone K06142 hlpA; outer membrane protein D Atep_26740 hypothetical protein K12544 rsaA; S-layer protein D Atep_09700 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D Atep_09660 c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Atep_09670 cystathionine gamma-synthase K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Atep_07440 XRE family transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D Atep_06690 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D Atep_18850 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D Atep_22780 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D Atep_08450 opgD; glucans biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein D Atep_23790 opgG; glucans biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D Atep_25420 terB; tellurium resistance protein TerB K05793 terB; tellurite resistance protein TerB D Atep_07910 tellurium resistance protein TerC K05794 terC; tellurite resistance protein TerC D Atep_21930 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D Atep_17550 apaG; protein ApaG K06195 apaG; ApaG protein D Atep_14600 hemerythrin K07216 hr; hemerythrin D Atep_24090 hypothetical protein K07216 hr; hemerythrin B B 09194 Poorly characterized C 99996 General function prediction only D Atep_15730 hypothetical protein K03558 cvpA; membrane protein required for colicin V production D Atep_25710 hypothetical protein K07001 K07001; NTE family protein D Atep_28130 plpD; patatin K07001 K07001; NTE family protein D Atep_02780 hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein D Atep_02800 erpA; putative iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D Atep_04590 ycf24; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D Atep_04610 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D Atep_11570 UPF0761 membrane protein K07058 K07058; membrane protein D Atep_21920 hypothetical protein K07113 fxsA; UPF0716 protein FxsA D Atep_09890 cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D Atep_19940 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D Atep_12300 smg; protein Smg K03747 smg; Smg protein D Atep_19070 creA; protein CreA K05805 creA; CreA protein D Atep_15720 hypothetical protein K03749 dedD; DedD protein D Atep_12790 hypothetical protein K03112 damX; DamX protein D Atep_08880 hypothetical protein K08989 K08989; putative membrane protein D Atep_02620 hypothetical protein K11312 K11312; cupin 2 domain-containing protein D Atep_04740 hypothetical protein K13256 psiE; protein PsiE C 99997 Function unknown D Atep_23010 hypothetical protein K06867 K06867; uncharacterized protein D Atep_29270 hypothetical protein K06867 K06867; uncharacterized protein D Atep_15010 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein D Atep_21100 hypothetical protein K06922 K06922; uncharacterized protein D Atep_10280 hypothetical protein K06923 K06923; uncharacterized protein D Atep_22210 zinc/iron-chelating domain-containing protein K06940 K06940; uncharacterized protein D Atep_19020 zinc/iron-chelating domain-containing protein K06940 K06940; uncharacterized protein D Atep_07080 hypothetical protein K06946 K06946; uncharacterized protein D Atep_22830 hypothetical protein K06946 K06946; uncharacterized protein D Atep_17930 cupin K06995 K06995; uncharacterized protein D Atep_09220 hypothetical protein K07019 K07019; uncharacterized protein D Atep_07700 hypothetical protein K07028 K07028; uncharacterized protein D Atep_26570 twitching motility protein PilT K07063 K07063; uncharacterized protein D Atep_21810 vapC_4; ribonuclease VapC K07064 K07064; uncharacterized protein D Atep_02670 pilus biogenesis protein K07065 K07065; uncharacterized protein D Atep_15450 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein D Atep_10880 hypothetical protein K07089 K07089; uncharacterized protein D Atep_11060 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D Atep_04730 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D Atep_10760 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D Atep_11140 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D Atep_07330 alkaline phosphatase K07093 K07093; uncharacterized protein D Atep_00610 hypothetical protein K07095 K07095; uncharacterized protein D Atep_15490 phosphodiesterase K07095 K07095; uncharacterized protein D Atep_15220 hypothetical protein K07098 K07098; uncharacterized protein D Atep_17840 hypothetical protein K07117 K07117; uncharacterized protein D Atep_02930 penicillin-binding protein activator K07121 K07121; uncharacterized protein D Atep_17860 hypothetical protein K07126 K07126; uncharacterized protein D Atep_01250 hypothetical protein K07126 K07126; uncharacterized protein D Atep_31250 hypothetical protein K07126 K07126; uncharacterized protein D Atep_31260 hypothetical protein K07126 K07126; uncharacterized protein D Atep_00190 ATPase K07133 K07133; uncharacterized protein D Atep_02220 hypothetical protein K07133 K07133; uncharacterized protein D Atep_30220 ATPase K07133 K07133; uncharacterized protein D Atep_08320 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D Atep_09930 ATP-dependent protease K07157 K07157; uncharacterized protein D Atep_29910 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D Atep_17270 hypothetical protein K09117 K09117; uncharacterized protein D Atep_28550 UPF0235 protein K09131 K09131; uncharacterized protein D Atep_04580 hypothetical protein K09137 K09137; uncharacterized protein D Atep_27020 hypothetical protein K09138 K09138; uncharacterized protein D Atep_04680 hypothetical protein K09141 K09141; uncharacterized protein D Atep_26230 hypothetical protein K09158 K09158; uncharacterized protein D Atep_06460 UPF0260 protein K09160 K09160; uncharacterized protein D Atep_22300 hypothetical protein K09780 K09780; uncharacterized protein D Atep_08750 hypothetical protein K09781 K09781; uncharacterized protein D Atep_19110 UPF0229 protein K09786 K09786; uncharacterized protein D Atep_22390 UPF0434 protein K09791 K09791; uncharacterized protein D Atep_01690 hypothetical protein K09792 K09792; uncharacterized protein D Atep_20920 hypothetical protein K09794 K09794; uncharacterized protein D Atep_13670 UPF0125 protein K09801 K09801; uncharacterized protein D Atep_03200 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D Atep_28660 hypothetical protein K09895 K09895; uncharacterized protein D Atep_20900 hypothetical protein K09912 K09912; uncharacterized protein D Atep_30330 hypothetical protein K09918 K09918; uncharacterized protein D Atep_30810 hypothetical protein K09918 K09918; uncharacterized protein D Atep_21500 hypothetical protein K09920 K09920; uncharacterized protein D Atep_20270 hypothetical protein K09921 K09921; uncharacterized protein D Atep_01360 ATP-binding protein K09928 K09928; uncharacterized protein D Atep_18180 hypothetical protein K09937 K09937; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 21, 2024