+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Amaranthus tricolor (tampala)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 130817709 mRNA cap guanine-N7 methyltransferase 1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 130818172 mRNA cap guanine-N7 methyltransferase 2 isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 130812540 uncharacterized protein LOC130812540 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 130798314 cyclin-dependent kinase D-1-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 130800029 cyclin-dependent kinase D-1-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
D Cap binding complex
E 130824613 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 130798706 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
E 130800301 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 130811042 pre-mRNA cleavage factor Im 25 kDa subunit 2 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 130815339 pre-mRNA cleavage factor Im 25 kDa subunit 1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 130807934 uncharacterized protein LOC130807934 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 130807956 uncharacterized protein LOC130807956 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 130818805 protein CLP1 homolog isoform X1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 130812517 uncharacterized protein LOC130812517 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 130814633 polyadenylation and cleavage factor homolog 4 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 130826869 polyadenylation and cleavage factor homolog 4 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 130806994 cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 130825538 cleavage and polyadenylation specificity factor subunit 2 isoform X1 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 130820471 cleavage and polyadenylation specificity factor subunit 3-I-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 130824165 30-kDa cleavage and polyadenylation specificity factor 30 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 130828368 uncharacterized protein LOC130828368 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 130800670 flowering time control protein FY K15542 PFS2; polyadenylation factor subunit 2
E 130797341 protein ANTHESIS POMOTING FACTOR 1 K14962 WDR82; COMPASS component SWD2
E 130823777 protein ANTHESIS POMOTING FACTOR 1 isoform X1 K14962 WDR82; COMPASS component SWD2
E 130799606 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 130802965 serine/threonine-protein phosphatase PP1 isozyme 4-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 130803585 serine/threonine-protein phosphatase PP1 isozyme 4 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 130807714 serine/threonine-protein phosphatase PP1 isozyme 3-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 130809368 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 130814070 serine/threonine-protein phosphatase PP1 isozyme 2 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 130817359 serine/threonine-protein phosphatase PP1 isozyme 9-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 130828269 serine/threonine-protein phosphatase PP1-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 130828776 serine/threonine-protein phosphatase PP1 isozyme 9 isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 130807998 uncharacterized protein LOC130807998 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 130798405 cleavage stimulation factor subunit 50 K14406 CSTF1; cleavage stimulation factor subunit 1
E 130810078 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2
E 130799994 cleavage stimulation factor subunit 77 isoform X1 K14408 CSTF3; cleavage stimulation factor subunit 3
E 130804737 uncharacterized protein LOC130804737 isoform X1 K06100 SYMPK; symplekin
E 130806101 uncharacterized protein LOC130806101 isoform X1 K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 130802980 uncharacterized protein LOC130802980 K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 130803545 uncharacterized protein LOC130803545 K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 130797684 small nuclear ribonucleoprotein SmD3b-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 130805377 small nuclear ribonucleoprotein SmD3b-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 130805904 uncharacterized protein LOC130805904 K11097 SNRPE; small nuclear ribonucleoprotein E
E 130805905 uncharacterized protein LOC130805905 K11097 SNRPE; small nuclear ribonucleoprotein E
E 130811537 probable small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 130815327 probable small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 130813332 probable small nuclear ribonucleoprotein G isoform X1 K11099 SNRPG; small nuclear ribonucleoprotein G
E 130827770 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 130825538 cleavage and polyadenylation specificity factor subunit 2 isoform X1 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 130820471 cleavage and polyadenylation specificity factor subunit 3-I-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 130810078 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2
E 130804737 uncharacterized protein LOC130804737 isoform X1 K06100 SYMPK; symplekin
E 130806101 uncharacterized protein LOC130806101 isoform X1 K06100 SYMPK; symplekin
D DRB sensitivity inducing factor (DSIF) complex
E 130797488 transcription elongation factor SPT4 homolog 2-like K15171 SUPT4H1; transcription elongation factor SPT4
E 130811508 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 130799576 N6-adenosine-methyltransferase MT-A70-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 130825484 N6-adenosine-methyltransferase non-catalytic subunit MTB K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 130805221 uncharacterized protein LOC130805221 isoform X1 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 130805702 uncharacterized protein LOC130805702 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 130797461 FKBP12-interacting protein of 37 kDa K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 130825081 uncharacterized protein LOC130825081 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 130798160 E3 ubiquitin-protein ligase HAKAI homolog K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 130797734 nuclear poly(A) polymerase 4 isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 130815689 nuclear poly(A) polymerase 3 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 130827660 nuclear poly(A) polymerase 1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
D Negative regulators of mRNA 3' end processing
E 130813696 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 130824131 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 130827554 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 130803896 zinc finger CCCH domain-containing protein 41 K13192 RBM26; RNA-binding protein 26
E 130801950 RNA demethylase ALKBH10B-like K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 130802369 RNA demethylase ALKBH9B-like K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 130808219 RNA demethylase ALKBH9B-like isoform X1 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 130814215 RNA demethylase ALKBH10B K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
C Other processing factors
D 130802924 KIN17-like protein K13102 KIN; DNA/RNA-binding protein KIN17
D 130806272 uncharacterized protein LOC130806272 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 130814230 serrate RNA effector molecule-like K27103 SRRT; serrate RNA effector molecule
D 130826847 serrate RNA effector molecule-like K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 130796777 RNA-binding protein Y14A K12876 RBM8A; RNA-binding protein 8A
E 130817442 RNA-binding protein Y14-like K12876 RBM8A; RNA-binding protein 8A
E 130825195 protein mago nashi homolog 2 K12877 MAGOH; protein mago nashi
E 130807454 THO complex subunit 4D-like K12881 THOC4; THO complex subunit 4
E 130814332 THO complex subunit 4B-like K12881 THOC4; THO complex subunit 4
E 130821437 THO complex subunit 4D-like isoform X1 K12881 THOC4; THO complex subunit 4
E 130803233 DEAD-box ATP-dependent RNA helicase 15 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 130804094 DEAD-box ATP-dependent RNA helicase 15-like K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 130815064 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 130824452 eukaryotic initiation factor 4A-3-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 130804033 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 130801799 uncharacterized protein LOC130801799 K13114 PNN; pinin
E 130820135 formin-like protein 20 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 130802367 serine/arginine-rich splicing factor SR45 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 130814083 uncharacterized protein LOC130814083 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 130814035 THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 130821125 THO complex subunit 2 isoform X1 K12879 THOC2; THO complex subunit 2
E 130815151 THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 130807454 THO complex subunit 4D-like K12881 THOC4; THO complex subunit 4
E 130814332 THO complex subunit 4B-like K12881 THOC4; THO complex subunit 4
E 130821437 THO complex subunit 4D-like isoform X1 K12881 THOC4; THO complex subunit 4
E 130798046 THO complex subunit 5A K13174 THOC5; THO complex subunit 5
E 130810373 THO complex subunit 5B K13174 THOC5; THO complex subunit 5
E 130814728 THO complex subunit 6 K13175 THOC6; THO complex subunit 6
E 130817717 THO complex subunit 7A-like K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 130824433 enhanced ethylene response protein 5 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 130806614 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 130826152 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 130820187 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 130824130 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 130800381 SAC3 family protein B isoform X1 K23719 SAC3; nuclear mRNA export protein SAC3
E 130817313 SAC3 family protein C K23719 SAC3; nuclear mRNA export protein SAC3
D Nuclear pore complex
E 130816164 nuclear-pore anchor K09291 TPR; nucleoprotein TPR
E 130806396 protein RAE1-like K14298 RAE1; mRNA export factor
E 130824060 protein RAE1 K14298 RAE1; mRNA export factor
E 130806710 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 130815981 protein transport protein SEC13 homolog B K14004 SEC13; protein transport protein SEC13
E 130815982 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 130815983 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 130815984 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 130804589 nuclear pore complex protein NUP85 K14304 NUP85; nuclear pore complex protein Nup85
E 130824216 nuclear pore complex protein NUP43 K14305 NUP43; nuclear pore complex protein Nup43
E 130800528 nucleoporin NUP152-like isoform X1 K14295 NUP50; nuclear pore complex protein Nup50
E 130821805 nuclear pore complex protein NUP54 K14308 NUP54; nuclear pore complex protein Nup54
E 130817533 nuclear pore complex protein NUP88 isoform X1 K14318 NUP88; nuclear pore complex protein Nup88
E 130826227 nuclear pore complex protein NUP93A-like K14309 NUP93; nuclear pore complex protein Nup93
E 130802396 nuclear pore complex protein NUP98A-like isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 130818842 nuclear pore complex protein NUP98A-like isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 130820501 nuclear pore complex protein NUP96 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 130826322 nuclear pore complex protein NUP98A-like isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 130813781 nuclear pore complex protein NUP107 isoform X1 K14301 NUP107; nuclear pore complex protein Nup107
E 130806840 nuclear pore complex protein NUP133 isoform X1 K14300 NUP133; nuclear pore complex protein Nup133
E 130799071 uncharacterized protein LOC130799071 isoform X1 K14311 NUP188; nuclear pore complex protein Nup188
E 130825598 nuclear pore complex protein NUP155 K14312 NUP155; nuclear pore complex protein Nup155
E 130808789 nuclear pore complex protein NUP160 isoform X1 K14303 NUP160; nuclear pore complex protein Nup160
E 130806757 nuclear pore complex protein NUP35 K14313 NUP35; nuclear pore complex protein Nup53
E 130816140 nuclear pore complex protein NUP205 isoform X1 K14310 NUP205; nuclear pore complex protein Nup205
E 130808978 nuclear pore complex protein GP210 isoform X1 K14314 NUP210; nuclear pore complex protein Nup210
E 130820394 nuclear pore complex protein NUP58 isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 130798255 zinc finger CCCH domain-containing protein 16 K14321 NUPL2; nucleoporin-like protein 2
E 130824042 uncharacterized protein LOC130824042 K14315 NDC1; nucleoporin NDC1
E 130800840 protein SEH1 K14299 SEH1; nucleoporin SEH1
E 130826079 aladin K14320 AAAS; aladin
E 130808783 mRNA export factor GLE1 K18723 GLE1; nucleoporin GLE1
D Ran-mediated transport factors
E 130801398 GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
E 130817698 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
E 130797646 plant UBX domain-containing protein 10-like K18726 FAF2; FAS-associated factor 2
E 130800796 plant UBX domain-containing protein 10 K18726 FAF2; FAS-associated factor 2
E 130812856 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 130815370 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 130824386 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 130806190 uncharacterized protein LOC130806190 isoform X1 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 130815083 uncharacterized protein LOC130815083 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 130818669 protein EXPORTIN 1A isoform X1 K14290 XPO1; exportin-1
E 130801107 uncharacterized protein LOC130801107 isoform X1 K18460 XPO7; exportin-7
E 130817311 uncharacterized protein LOC130817311 isoform X1 K18460 XPO7; exportin-7
E 130810992 RAN GTPase-activating protein 2-like K14319 RANGAP1; Ran GTPase-activating protein 1
E 130809158 nuclear transport factor 2A K28773 NUTF2; nuclear transport factor 2
E 130814641 nuclear transport factor 2B K28773 NUTF2; nuclear transport factor 2
E 130820633 nuclear transport factor 2B K28773 NUTF2; nuclear transport factor 2
D eIF4F and regulatory proteins
E 130815116 eukaryotic translation initiation factor 4E-2-like K03259 EIF4E; translation initiation factor 4E
E 130820945 eukaryotic translation initiation factor NCBP K03259 EIF4E; translation initiation factor 4E
E 130821533 eukaryotic translation initiation factor K03259 EIF4E; translation initiation factor 4E
E 130824123 eukaryotic translation initiation factor 4E-1-like K03259 EIF4E; translation initiation factor 4E
E 130797736 eukaryotic initiation factor 4A-9-like K03257 EIF4A; translation initiation factor 4A
E 130797770 eukaryotic initiation factor 4A-9-like K03257 EIF4A; translation initiation factor 4A
E 130804130 eukaryotic initiation factor 4A-9 K03257 EIF4A; translation initiation factor 4A
E 130804148 eukaryotic initiation factor 4A-9-like K03257 EIF4A; translation initiation factor 4A
E 130809403 ATP-dependent RNA helicase eIF4A K03257 EIF4A; translation initiation factor 4A
E 130810328 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 130814452 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 130814784 eukaryotic translation initiation factor-like K03260 EIF4G; translation initiation factor 4G
E 130823618 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 130823678 eukaryotic translation initiation factor-like K03260 EIF4G; translation initiation factor 4G
E 130823681 uncharacterized protein LOC130823681 K03260 EIF4G; translation initiation factor 4G
E 130799002 eukaryotic translation initiation factor 4B3 K03258 EIF4B; translation initiation factor 4B
E 130807900 eukaryotic translation initiation factor 4B2-like K03258 EIF4B; translation initiation factor 4B
E 130828165 protein PIR isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 130813229 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 130825104 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 130828833 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 130820460 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 130821291 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 130805349 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 130809915 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 130809916 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 130810094 polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 130813648 polyadenylate-binding protein 7 K13126 PABPC; polyadenylate-binding protein
E 130825237 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 130814043 DExH-box ATP-dependent RNA helicase DExH11 isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 130817358 uncharacterized protein LOC130817358 K07575 MCTS; malignant T-cell-amplified sequence
E 130815040 uncharacterized protein LOC130815040 isoform X1 K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
D Other transport factors
E 130814594 partner of Y14 and mago K14294 WIBG; partner of Y14 and mago
E 130798382 glycine-rich RNA-binding protein blt801 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130800398 glycine-rich RNA-binding protein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130801834 glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130805348 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130806875 uncharacterized protein LOC130806875 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130808980 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130809509 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130813885 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130819246 UBP1-associated protein 2A K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130826426 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130798098 RNA-binding protein 1-like K14411 MSI; RNA-binding protein Musashi
E 130811125 RNA-binding protein 1-like K14411 MSI; RNA-binding protein Musashi
E 130815178 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 130818370 heterogeneous nuclear ribonucleoprotein 1-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 130818371 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 130820349 uncharacterized protein LOC130820349 K14411 MSI; RNA-binding protein Musashi
E 130823899 uncharacterized protein LOC130823899 K14411 MSI; RNA-binding protein Musashi
E 130825686 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 130825689 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 130797815 uncharacterized protein LOC130797815 isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 130825785 protein PELOTA 1 K06965 PELO; protein pelota
E 130800102 polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 130800471 polyadenylate-binding protein 2-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 130807810 polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 130821272 polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 130812747 DEAD-box ATP-dependent RNA helicase 38 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 130809129 uncharacterized protein LOC130809129 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 130813176 protein MODIFIER OF SNC1 11 K18732 SARNP; SAP domain-containing ribonucleoprotein
E 130817361 transcription factor Pur-alpha 1 K21772 PURA; transcriptional activator protein Pur-alpha
E 130802037 SAC3 family protein A isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E 130796821 eukaryotic peptide chain release factor subunit 1-3-like K03265 ETF1; peptide chain release factor subunit 1
E 130800346 eukaryotic peptide chain release factor subunit 1-3-like K03265 ETF1; peptide chain release factor subunit 1
E 130800349 eukaryotic peptide chain release factor subunit 1-3 K03265 ETF1; peptide chain release factor subunit 1
E 130801292 uncharacterized protein LOC130801292 isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 130810609 uncharacterized protein LOC130810609 K03267 ERF3; peptide chain release factor subunit 3
E 130799172 regulator of nonsense transcripts 1 homolog K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 130800913 regulator of nonsense transcripts 1 homolog isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 130802243 regulator of nonsense transcripts UPF2 K14327 UPF2; regulator of nonsense transcripts 2
E 130810052 regulator of nonsense transcripts UPF3 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 130807612 serine/threonine-protein phosphatase PP2A-2 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 130817384 serine/threonine-protein phosphatase PP2A catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 130820724 serine/threonine-protein phosphatase PP2A-2 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 130828876 serine/threonine-protein phosphatase PP2A catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 130797669 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 130799971 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 130807462 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 130800485 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 130804008 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 130805143 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 130817422 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 130818797 serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 130825172 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 130828277 serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 130807906 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 130808163 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 130813180 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 130818785 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 130820706 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 130827227 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 130822823 uncharacterized protein LOC130822823 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 130796705 nonsense-mediated mRNA decay factor SMG7 K14409 SMG7; protein SMG7
E 130827334 nonsense-mediated mRNA decay factor SMG7-like K14409 SMG7; protein SMG7
E 130805330 uncharacterized protein LOC130805330 isoform X1 K18734 SMG8; protein SMG8
E 130820614 uncharacterized protein LOC130820614 K18735 SMG9; protein SMG9
E 130820460 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 130821291 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
C Factors involved in mRNA localization
D Cargo complex
E 130825696 pumilio homolog 24 isoform X1 K14844 PUF6; pumilio homology domain family member 6
E 130803969 uncharacterized protein LOC130803969 isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
D Trans-acting binding proteins
E 130803844 uncharacterized protein LOC130803844 K13210 FUBP; far upstream element-binding protein
E 130813065 uncharacterized protein LOC130813065 K13210 FUBP; far upstream element-binding protein
E 130814905 uncharacterized protein LOC130814905 K13210 FUBP; far upstream element-binding protein
E 130801458 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 130801460 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 130801461 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 130801462 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 130802671 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 130802912 elongation factor 1-gamma 2-like K03233 EEF1G; elongation factor 1-gamma
E 130810048 elongation factor 1-gamma 2-like K03233 EEF1G; elongation factor 1-gamma
E 130810548 elongation factor 1-gamma 2-like K03233 EEF1G; elongation factor 1-gamma
E 130818736 probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
D Other mRNA localization factors
E 130828165 protein PIR isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 130797792 RNA-binding KH domain-containing protein PEPPER-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130798084 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130799170 KH domain-containing protein At4g18375-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130801871 KH domain-containing protein At4g18375 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130802293 KH domain-containing protein At4g18375-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130803622 RNA-binding KH domain-containing protein PEPPER K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130804682 KH domain-containing protein At4g18375-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130805833 flowering locus K homology domain-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130806213 RNA-binding KH domain-containing protein RCF3 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130813707 KH domain-containing protein HEN4 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130817561 flowering locus K homology domain-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 130828253 flowering locus K homology domain K21444 PCBP3_4; poly(rC)-binding protein 3/4
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 130802783 protein argonaute 16-like isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130805060 protein argonaute 5-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130805528 protein argonaute 4B-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130805538 protein argonaute 4B-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130805552 protein argonaute 4B-like isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130806201 protein argonaute 4A-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130815076 protein argonaute 1-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130815261 protein argonaute PNH1-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130821242 protein argonaute 7 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130823849 protein argonaute PNH1-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130824388 protein argonaute 1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 130815116 eukaryotic translation initiation factor 4E-2-like K03259 EIF4E; translation initiation factor 4E
E 130820945 eukaryotic translation initiation factor NCBP K03259 EIF4E; translation initiation factor 4E
E 130821533 eukaryotic translation initiation factor K03259 EIF4E; translation initiation factor 4E
E 130824123 eukaryotic translation initiation factor 4E-1-like K03259 EIF4E; translation initiation factor 4E
E 130799172 regulator of nonsense transcripts 1 homolog K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 130800913 regulator of nonsense transcripts 1 homolog isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 130813229 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 130825104 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 130828833 DEAD-box ATP-dependent RNA helicase 37-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 130800100 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 130804832 DEAD-box ATP-dependent RNA helicase 6-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 130810470 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 130802329 protein decapping 5-like K18749 LSM14; protein LSM14
E 130807438 protein decapping 5 K18749 LSM14; protein LSM14
E 130803825 probable RNA helicase SDE3 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 130814879 transportin-1-like isoform X1 K18752 TNPO1; transportin-1
E 130824113 transportin-1-like K18752 TNPO1; transportin-1
E 130822823 uncharacterized protein LOC130822823 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 130796705 nonsense-mediated mRNA decay factor SMG7 K14409 SMG7; protein SMG7
E 130827334 nonsense-mediated mRNA decay factor SMG7-like K14409 SMG7; protein SMG7
E 130802257 zinc finger CCCH domain-containing protein 14-like isoform X1 K18753 ZFP36L; butyrate response factor
E 130808809 zinc finger CCCH domain-containing protein 15 K18753 ZFP36L; butyrate response factor
E 130816107 uncharacterized protein LOC130816107 K18753 ZFP36L; butyrate response factor
E 130821154 zinc finger CCCH domain-containing protein 15-like K18753 ZFP36L; butyrate response factor
E 130798382 glycine-rich RNA-binding protein blt801 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130800398 glycine-rich RNA-binding protein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130801834 glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130805348 heterogeneous nuclear ribonucleoprotein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130806875 uncharacterized protein LOC130806875 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130808980 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130809509 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130813885 UBP1-associated protein 2A-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130819246 UBP1-associated protein 2A K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130826426 UBP1-associated protein 2C-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 130805565 la-related protein 1A K18757 LARP1; la-related protein 1
E 130808659 la-related protein 1C-like K18757 LARP1; la-related protein 1
E 130809992 la-related protein 1C-like K18757 LARP1; la-related protein 1
E 130820276 la-related protein 1C-like isoform X1 K18757 LARP1; la-related protein 1
D P-body specific factors
E 130801634 mRNA-decapping enzyme subunit 2-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 130802664 mRNA-decapping enzyme subunit 2-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 130812719 mRNA-decapping enzyme-like protein isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 130813199 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 130814937 sm-like protein LSM1B isoform X1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 130827157 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 130797614 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 130799762 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 130810139 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 130814010 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 130827449 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 130828343 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 130806760 sm-like protein LSM36B K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 130825551 sm-like protein LSM36B K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 130801606 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 130813342 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 130797774 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 130800373 tubulin alpha-2 chain-like K07374 TUBA; tubulin alpha
E 130817371 tubulin alpha-5 chain K07374 TUBA; tubulin alpha
E 130817956 tubulin alpha-2 chain K07374 TUBA; tubulin alpha
E 130821372 tubulin alpha-2 chain-like K07374 TUBA; tubulin alpha
E 130821373 tubulin alpha-2 chain K07374 TUBA; tubulin alpha
E 130822081 tubulin alpha-5 chain-like K07374 TUBA; tubulin alpha
E 130810318 uncharacterized protein LOC130810318 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 130805098 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 130826683 general negative regulator of transcription subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 130805500 uncharacterized protein LOC130805500 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 130806023 uncharacterized protein LOC130806023 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 130799579 carbon catabolite repressor protein 4 homolog 4 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 130818269 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 130825100 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 130826743 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 130802812 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 130806408 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 130812726 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 130814133 probable CCR4-associated factor 1 homolog 11 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 130802703 DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 130802381 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 130812923 protein PAT1 homolog 2-like isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 130812925 protein PAT1 homolog 2-like isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 130824398 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4
E 130824403 enhancer of mRNA-decapping protein 4-like isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 130802243 regulator of nonsense transcripts UPF2 K14327 UPF2; regulator of nonsense transcripts 2
E 130810052 regulator of nonsense transcripts UPF3 K14328 UPF3; regulator of nonsense transcripts 3
E 130827215 DNA-directed RNA polymerase II subunit RPB7 isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 130798171 YTH domain-containing protein ECT1-like isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 130801475 YTH domain-containing protein ECT3-like isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 130808997 YTH domain-containing protein ECT3 K20102 YTHDF; YTH domain-containing family protein
E 130819811 YTH domain-containing protein ECT4-like K20102 YTHDF; YTH domain-containing family protein
E 130821175 YTH domain-containing protein ECT3-like K20102 YTHDF; YTH domain-containing family protein
E 130822765 YTH domain-containing protein ECT4-like K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 130813780 oligouridylate-binding protein 1B-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 130815361 LOW QUALITY PROTEIN: oligouridylate-binding protein 1-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 130827588 oligouridylate-binding protein 1B-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 130805349 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 130809915 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 130809916 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 130810094 polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 130813648 polyadenylate-binding protein 7 K13126 PABPC; polyadenylate-binding protein
E 130825237 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 130798392 nuclear transport factor 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 130800390 nuclear transport factor 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 130801830 nuclear transport factor 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 130809363 nuclear transport factor 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 130813051 nuclear transport factor 2-like isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 130825802 uncharacterized protein LOC130825802 K15026 EIF2A; translation initiation factor 2A
E 130821261 eukaryotic translation initiation factor 3 subunit B-like isoform X1 K03253 EIF3B; translation initiation factor 3 subunit B
E 130828318 eukaryotic translation initiation factor 3 subunit B-like K03253 EIF3B; translation initiation factor 3 subunit B
E 130797736 eukaryotic initiation factor 4A-9-like K03257 EIF4A; translation initiation factor 4A
E 130797770 eukaryotic initiation factor 4A-9-like K03257 EIF4A; translation initiation factor 4A
E 130804130 eukaryotic initiation factor 4A-9 K03257 EIF4A; translation initiation factor 4A
E 130804148 eukaryotic initiation factor 4A-9-like K03257 EIF4A; translation initiation factor 4A
E 130809403 ATP-dependent RNA helicase eIF4A K03257 EIF4A; translation initiation factor 4A
E 130815064 eukaryotic initiation factor 4A-3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 130824452 eukaryotic initiation factor 4A-3-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 130799002 eukaryotic translation initiation factor 4B3 K03258 EIF4B; translation initiation factor 4B
E 130807900 eukaryotic translation initiation factor 4B2-like K03258 EIF4B; translation initiation factor 4B
E 130810328 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 130814452 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 130814784 eukaryotic translation initiation factor-like K03260 EIF4G; translation initiation factor 4G
E 130823618 eukaryotic translation initiation factor 4G-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 130823678 eukaryotic translation initiation factor-like K03260 EIF4G; translation initiation factor 4G
E 130823681 uncharacterized protein LOC130823681 K03260 EIF4G; translation initiation factor 4G
E 130800003 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 130803494 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 130824553 uncharacterized protein LOC130824553 isoform X1 K18404 TDRD3; tudor domain-containing protein 3
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 130812719 mRNA-decapping enzyme-like protein isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 130813199 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 130801634 mRNA-decapping enzyme subunit 2-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 130802664 mRNA-decapping enzyme subunit 2-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 130800100 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 130804832 DEAD-box ATP-dependent RNA helicase 6-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 130810470 DEAD-box ATP-dependent RNA helicase 8-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 130824398 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4
E 130824403 enhancer of mRNA-decapping protein 4-like isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 130802381 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 130812923 protein PAT1 homolog 2-like isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 130812925 protein PAT1 homolog 2-like isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 130814937 sm-like protein LSM1B isoform X1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 130827157 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 130797614 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 130799762 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 130810139 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 130814010 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 130827449 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 130828343 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 130806760 sm-like protein LSM36B K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 130825551 sm-like protein LSM36B K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 130801606 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 130813342 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 130797774 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 130810110 5'-3' exoribonuclease 3 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 130797258 5'-3' exoribonuclease 4 K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-]
D Other 5'-3' decay factors
C 3'-5' decay
D Core exosome factors
E 130828852 uncharacterized protein LOC130828852 isoform X1 K07573 CSL4; exosome complex component CSL4
E 130806021 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 130797899 uncharacterized protein LOC130797899 K03681 RRP40; exosome complex component RRP40
E 130811397 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41
E 130814536 exosome complex exonuclease RRP46 homolog isoform X1 K12590 RRP46; exosome complex component RRP46
E 130812525 exosome complex component RRP41-like isoform X1 K12587 MTR3; exosome complex component MTR3
E 130809913 uncharacterized protein LOC130809913 isoform X1 K12589 RRP42; exosome complex component RRP42
E 130813685 uncharacterized protein LOC130813685 isoform X1 K12589 RRP42; exosome complex component RRP42
E 130826242 uncharacterized protein LOC130826242 K12586 RRP43; exosome complex component RRP43
E 130802839 exosome complex component RRP45B-like isoform X1 K03678 RRP45; exosome complex component RRP45
E 130814330 exosome complex component RRP45A-like K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 130810109 exosome complex exonuclease RRP44 homolog A K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 130800037 protein RRP6-like 2 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 130804496 protein RRP6-like 2 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 130801443 uncharacterized protein LOC130801443 K12592 C1D; exosome complex protein LRP1
E 130814107 uncharacterized protein LOC130814107 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 130809423 uncharacterized protein LOC130809423 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 130803472 DExH-box ATP-dependent RNA helicase DExH10 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
E 130821191 DExH-box ATP-dependent RNA helicase DExH9 isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 130814043 DExH-box ATP-dependent RNA helicase DExH11 isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 130800131 tetratricopeptide repeat protein SKI3 isoform X1 K12600 SKI3; superkiller protein 3
E 130818108 WD repeat-containing protein VIP3 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 130799579 carbon catabolite repressor protein 4 homolog 4 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 130818269 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 130825100 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 130826743 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 130810318 uncharacterized protein LOC130810318 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 130805098 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 130826683 general negative regulator of transcription subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 130805500 uncharacterized protein LOC130805500 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 130806023 uncharacterized protein LOC130806023 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 130802812 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 130806408 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 130812726 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 130814133 probable CCR4-associated factor 1 homolog 11 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 130818308 uncharacterized protein LOC130818308 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 130814445 uncharacterized protein LOC130814445 isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
E 130796927 ABC transporter I family member 20 K12608 CAF16; CCR4-NOT complex subunit CAF16
E 130804061 ABC transporter I family member 19-like isoform X1 K12608 CAF16; CCR4-NOT complex subunit CAF16
D Pan complex
D Other 3'-5' decay factors
E 130798164 poly(A)-specific ribonuclease PARN-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 130808028 poly(A)-specific ribonuclease PARN isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 130797327 DExH-box ATP-dependent RNA helicase DExH3 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 130800042 DExH-box ATP-dependent RNA helicase DExH1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 130821151 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 130824548 DExH-box ATP-dependent RNA helicase DExH6-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 130825182 DExH-box ATP-dependent RNA helicase DExH3-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 130796850 uncharacterized protein LOC130796850 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 130818926 uncharacterized protein LOC130818926 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 130797220 protein RST1 isoform X1 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 130807437 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
E 130818796 uncharacterized protein LOC130818796 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Other RNA degradosome components
E 130800432 enolase 1, chloroplastic K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 130826734 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 130826735 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 130826794 cytosolic enolase 3 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 130816132 polyribonucleotide nucleotidyltransferase 2, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 130817837 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 130800189 ATP-dependent 6-phosphofructokinase 3-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 130801244 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 130803979 ATP-dependent 6-phosphofructokinase 6 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 130807748 ATP-dependent 6-phosphofructokinase 5, chloroplastic K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 130809149 ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 130814801 ATP-dependent 6-phosphofructokinase 6-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 130823793 ATP-dependent 6-phosphofructokinase 6-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 130797091 heat shock 70 kDa protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 130806365 heat shock 70 kDa protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 130808152 heat shock 70 kDa protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 130805976 ruBisCO large subunit-binding protein subunit alpha K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 130806237 ruBisCO large subunit-binding protein subunit beta, chloroplastic-like isoform X1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 130809170 chaperonin 60 subunit alpha 2, chloroplastic-like isoform X1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 130812781 ruBisCO large subunit-binding protein subunit beta, chloroplastic-like isoform X1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 130813681 chaperonin CPN60-like 2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 130817560 ruBisCO large subunit-binding protein subunit beta, chloroplastic K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 130818156 chaperonin CPN60, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 130825482 ruBisCO large subunit-binding protein subunit beta, chloroplastic-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 130825490 ruBisCO large subunit-binding protein subunit beta, chloroplastic-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 130826211 chaperonin CPN60, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 130806021 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 130828852 uncharacterized protein LOC130828852 isoform X1 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 130811397 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41
E 130809913 uncharacterized protein LOC130809913 isoform X1 K12589 RRP42; exosome complex component RRP42
E 130813685 uncharacterized protein LOC130813685 isoform X1 K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 26, 2026