+E Transcription factors KO #

  Transcription Factors - Aureimonas sp. AU20

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D M673_19445 hypothetical protein K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein D M673_01275 hypothetical protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D M673_03255 hypothetical protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D M673_09365 hypothetical protein K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator C LysR family D M673_18735 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D M673_15715 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D M673_20475 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D M673_07010 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D M673_12165 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D M673_19065 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D M673_07625 hypothetical protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D M673_03470 hypothetical protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D M673_04140 hypothetical protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D M673_00795 hypothetical protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT C DeoR family D M673_20850 hypothetical protein K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D M673_22015 hypothetical protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D M673_22110 hypothetical protein K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor C LacI family D M673_17350 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D M673_17635 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D M673_17805 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D M673_03765 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D M673_18105 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D M673_20595 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D M673_21940 hypothetical protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D M673_22695 hypothetical protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D M673_18455 hypothetical protein K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor C GntR family D M673_17890 hypothetical protein K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D M673_18760 hypothetical protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D M673_21895 hypothetical protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D M673_09430 hypothetical protein K03710 K03710; GntR family transcriptional regulator D M673_22660 hypothetical protein K03710 K03710; GntR family transcriptional regulator D M673_16280 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D M673_16310 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D M673_22365 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D M673_21725 hypothetical protein K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor D M673_08885 hypothetical protein K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor D M673_17550 hypothetical protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D M673_08830 hypothetical protein K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D M673_08150 hypothetical protein K09017 rutR; TetR/AcrR family transcriptional regulator D M673_23390 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D M673_20685 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D M673_04780 hypothetical protein K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D M673_23000 hypothetical protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA C Lrp/AsnC family D M673_08280 hypothetical protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D M673_04245 hypothetical protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D M673_18250 hypothetical protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D M673_14100 ArsR family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D M673_09985 hypothetical protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D M673_02055 hypothetical protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator C LuxR family D M673_02030 hypothetical protein K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D M673_21810 hypothetical protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D M673_20140 hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein C MarR family D M673_02715 hypothetical protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D M673_20750 hypothetical protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D M673_02950 hypothetical protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D M673_16995 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D M673_02555 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D M673_04880 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D M673_19340 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D M673_05190 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C Fur family D M673_02505 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D M673_07450 hypothetical protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D M673_00040 transcriptional regulator K09826 irr; Fur family transcriptional regulator, iron response regulator C IclR family D M673_20365 hypothetical protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein C CRP/FNR family D M673_18805 hypothetical protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D M673_13175 hypothetical protein K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator C ArsR family D M673_21200 hypothetical protein K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator C XRE family D M673_22605 hypothetical protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D M673_19270 hypothetical protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator C PadR family C Other families D M673_20805 hypothetical protein K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon D M673_11745 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D M673_23010 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D M673_18110 hypothetical protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D M673_22755 hypothetical protein K02019 modE; molybdate transport system regulatory protein D M673_14785 hypothetical protein K02019 modE; molybdate transport system regulatory protein B Ribbon-helix-helix C CopG family C Other families D M673_08285 hypothetical protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D M673_16605 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D M673_19640 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D M673_02220 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D M673_07230 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D M673_21665 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D M673_17520 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D M673_05620 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D M673_03455 hypothetical protein K03705 hrcA; heat-inducible transcriptional repressor D M673_00715 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D M673_00720 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D M673_09735 hypothetical protein K07735 algH; putative transcriptional regulator D M673_10375 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D M673_12830 hypothetical protein K07738 nrdR; transcriptional repressor NrdR D M673_15350 hypothetical protein K03925 mraZ; transcriptional regulator MraZ D M673_11975 hypothetical protein K25885 exoR; exopolysaccharide production negative regulator ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0