+D GENES KO #

  KEGG Orthology (KO) - Aurantimicrobium sp. MWH-Uga1

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:auw00010] D AURUGA1_00717 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D AURUGA1_009782 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AURUGA1_00433 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D AURUGA1_00432 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AURUGA1_00988 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AURUGA1_00990 gap2; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AURUGA1_00704 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AURUGA1_00989 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AURUGA1_00284 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AURUGA1_00362 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AURUGA1_00833 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AURUGA1_00403 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AURUGA1_00404 cmdD; Chondramide synthase cmdD K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AURUGA1_00939 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AURUGA1_00919 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_01420 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AURUGA1_01406 yahK; Aldehyde reductase YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00137 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D AURUGA1_01341 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AURUGA1_01383 mro; Aldose 1-epimerase precursor K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D AURUGA1_00075 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AURUGA1_00932 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D AURUGA1_00358 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:auw00020] D AURUGA1_00488 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D AURUGA1_00904 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AURUGA1_01456 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AURUGA1_01240 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_01438 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AURUGA1_01439 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AURUGA1_01307 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AURUGA1_01308 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AURUGA1_01305 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AURUGA1_01306 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AURUGA1_00259 fumB; Fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AURUGA1_00424 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AURUGA1_01351 mqo1; putative malate:quinone oxidoreductase 1 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AURUGA1_00712 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D AURUGA1_00358 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D AURUGA1_00939 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AURUGA1_00919 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:auw00030] D AURUGA1_009782 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AURUGA1_00983 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AURUGA1_00985 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D AURUGA1_00351 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D AURUGA1_00847 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AURUGA1_00980 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AURUGA1_00981 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D AURUGA1_00618 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AURUGA1_01366 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D AURUGA1_00075 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AURUGA1_00346 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AURUGA1_00432 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AURUGA1_00433 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:auw00040] D AURUGA1_01346 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AURUGA1_01486 gtaB_2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AURUGA1_01259 gtaB_1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AURUGA1_00847 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AURUGA1_01379 xylB; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D AURUGA1_01378 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] C 00051 Fructose and mannose metabolism [PATH:auw00051] D AURUGA1_00350 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AURUGA1_01285 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D AURUGA1_01280 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AURUGA1_01368 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AURUGA1_01304 algA; Alginate biosynthesis protein AlgA K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AURUGA1_00433 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D AURUGA1_01311 lacC_1; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D AURUGA1_01387 lacC_2; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D AURUGA1_01378 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D AURUGA1_00432 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AURUGA1_00988 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AURUGA1_00618 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AURUGA1_01312 fruA_1; PTS system fructose-specific EIIABC component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D AURUGA1_01314 fruA_3; PTS system fructose-specific EIIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:auw00052] D AURUGA1_01383 mro; Aldose 1-epimerase precursor K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D AURUGA1_01486 gtaB_2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AURUGA1_01259 gtaB_1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AURUGA1_00075 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AURUGA1_00717 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D AURUGA1_01039 bfrA; Beta-fructosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D AURUGA1_01038 malL_1; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AURUGA1_01451 malL_2; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AURUGA1_01491 malL_3; Oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism [PATH:auw00053] D AURUGA1_01346 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:auw00500] D AURUGA1_01039 bfrA; Beta-fructosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D AURUGA1_01038 malL_1; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AURUGA1_01451 malL_2; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D AURUGA1_00384 ams; Amylosucrase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D AURUGA1_01486 gtaB_2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AURUGA1_01259 gtaB_1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AURUGA1_00779 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D AURUGA1_00583 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D AURUGA1_00585 glgX; Glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D AURUGA1_01491 malL_3; Oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D AURUGA1_00584 glgE2; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2 K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D AURUGA1_00780 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D AURUGA1_00075 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AURUGA1_00717 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D AURUGA1_009782 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AURUGA1_00350 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:auw00520] D AURUGA1_00757 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AURUGA1_00350 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AURUGA1_00199 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AURUGA1_00197 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D AURUGA1_00345 glmU_1; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AURUGA1_01081 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AURUGA1_01400 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AURUGA1_01214 algD_1; GDP-mannose 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D AURUGA1_01237 algD_2; GDP-mannose 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D AURUGA1_00717 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D AURUGA1_00932 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D AURUGA1_00075 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AURUGA1_01486 gtaB_2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AURUGA1_01259 gtaB_1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AURUGA1_01346 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AURUGA1_009782 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AURUGA1_01285 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D AURUGA1_01280 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AURUGA1_01368 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AURUGA1_01304 algA; Alginate biosynthesis protein AlgA K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AURUGA1_00779 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:auw00620] D AURUGA1_01341 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AURUGA1_00939 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AURUGA1_00919 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_01420 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AURUGA1_01406 yahK; Aldehyde reductase YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AURUGA1_00833 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AURUGA1_01300 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00137 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D AURUGA1_00712 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D AURUGA1_01351 mqo1; putative malate:quinone oxidoreductase 1 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AURUGA1_00259 fumB; Fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AURUGA1_00424 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AURUGA1_00358 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D AURUGA1_00403 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AURUGA1_00404 cmdD; Chondramide synthase cmdD K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AURUGA1_00774 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:auw00630] D AURUGA1_01341 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AURUGA1_00488 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D AURUGA1_00904 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AURUGA1_01300 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D AURUGA1_01295 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D AURUGA1_00030 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AURUGA1_00032 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AURUGA1_00925 glnA_1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00927 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00554 glnT; Glutamine synthetase 3 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01416 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01421 glnA_3; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00267 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AURUGA1_00473 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AURUGA1_00471 gcvT_2; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_00472 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D AURUGA1_01240 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D AURUGA1_00266 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:auw00640] D AURUGA1_01341 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AURUGA1_00669 acsA_1; Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D AURUGA1_00059 bkdA; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D AURUGA1_00060 bkdB; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D AURUGA1_00061 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_00085 fadE; putative acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D AURUGA1_01300 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D AURUGA1_00526 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AURUGA1_01295 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D AURUGA1_01439 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AURUGA1_01438 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AURUGA1_00438 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AURUGA1_00671 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D AURUGA1_00672 prpB; Methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:auw00650] D AURUGA1_01307 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AURUGA1_01308 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AURUGA1_01305 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AURUGA1_01306 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AURUGA1_00526 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AURUGA1_01325 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_01423 gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_00604 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_01097 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AURUGA1_01096 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:auw00660] D AURUGA1_01097 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AURUGA1_01096 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AURUGA1_01429 frc; Formyl-coenzyme A transferase K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22] D AURUGA1_01439 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AURUGA1_01438 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AURUGA1_01431 paaZ; Bifunctional protein PaaZ K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56] D AURUGA1_00415 galC; 4-carboxy-4-hydroxy-2-oxoadipic acid aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D AURUGA1_01083 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AURUGA1_01082 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AURUGA1_01091 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:auw00562] D AURUGA1_01453 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AURUGA1_00442 iolG; Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AURUGA1_00441 iolE; Inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D AURUGA1_00440 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D AURUGA1_00439 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D AURUGA1_00436 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D AURUGA1_00438 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AURUGA1_00988 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:auw00190] D AURUGA1_00366 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D AURUGA1_01307 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AURUGA1_01308 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AURUGA1_01305 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AURUGA1_01306 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AURUGA1_00813 aioB; Arsenite oxidase subunit AioB precursor K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AURUGA1_00812 petB; Cytochrome b6 K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D AURUGA1_00814 qcrC; Menaquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D AURUGA1_00978 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AURUGA1_00811 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D AURUGA1_00815 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D AURUGA1_00810 ctaD; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D AURUGA1_00809 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D AURUGA1_00977 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D AURUGA1_01191 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AURUGA1_01189 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AURUGA1_01190 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AURUGA1_01192 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AURUGA1_01188 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AURUGA1_01195 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AURUGA1_01193 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AURUGA1_01194 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AURUGA1_00115 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D AURUGA1_00279 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AURUGA1_00090 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:auw00710] D AURUGA1_00989 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AURUGA1_00990 gap2; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AURUGA1_00704 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AURUGA1_00432 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AURUGA1_00433 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D AURUGA1_00980 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AURUGA1_00618 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D AURUGA1_00988 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AURUGA1_00847 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AURUGA1_00981 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] C 00720 Other carbon fixation pathways [PATH:auw00720] D AURUGA1_00403 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AURUGA1_00404 cmdD; Chondramide synthase cmdD K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AURUGA1_00712 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D AURUGA1_00259 fumB; Fumarate hydratase class I, anaerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D AURUGA1_00424 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AURUGA1_01307 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AURUGA1_01308 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AURUGA1_01305 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AURUGA1_01306 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AURUGA1_01438 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AURUGA1_01439 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AURUGA1_01456 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AURUGA1_00904 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D AURUGA1_00268 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AURUGA1_00632 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AURUGA1_01341 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:auw00680] D AURUGA1_00267 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AURUGA1_00362 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AURUGA1_00432 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AURUGA1_00433 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D AURUGA1_01341 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AURUGA1_00403 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AURUGA1_00404 cmdD; Chondramide synthase cmdD K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AURUGA1_00284 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AURUGA1_01092 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AURUGA1_00306 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AURUGA1_00778 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:auw00910] D AURUGA1_00925 glnA_1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00927 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00554 glnT; Glutamine synthetase 3 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01416 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01421 glnA_3; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00835 gltB_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AURUGA1_00834 gltB_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AURUGA1_00698 mtcA1; Beta-carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D AURUGA1_00425 cynT; Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:auw00920] D AURUGA1_01069 ssuA; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein D AURUGA1_01068 ssuC; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D AURUGA1_01070 ssuB; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AURUGA1_00896 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AURUGA1_01202 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AURUGA1_01201 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AURUGA1_01258 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AURUGA1_00971 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:auw00061] D AURUGA1_01300 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D AURUGA1_00943 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein D AURUGA1_00941 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AURUGA1_00942 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AURUGA1_00944 kasB; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AURUGA1_00777 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AURUGA1_00033 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AURUGA1_00716 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:auw00071] D AURUGA1_00901 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AURUGA1_00085 fadE; putative acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D AURUGA1_00516 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D AURUGA1_00716 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AURUGA1_00408 thcD_1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D AURUGA1_01420 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:auw00561] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01406 yahK; Aldehyde reductase YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AURUGA1_00817 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D AURUGA1_00666 yutF; putative hydrolase YutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D AURUGA1_00718 plsC_1; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AURUGA1_01080 plsC_2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AURUGA1_01086 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:auw00564] D AURUGA1_01079 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D AURUGA1_00220 glpD; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D AURUGA1_00718 plsC_1; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AURUGA1_01080 plsC_2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AURUGA1_01086 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AURUGA1_01442 glpQ; Glycerophosphoryl diester phosphodiesterase precursor K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AURUGA1_00823 cytoplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D AURUGA1_00574 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D AURUGA1_01036 pgsA2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D AURUGA1_00128 clsA; Major cardiolipin synthase ClsA K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:auw00592] D AURUGA1_00085 fadE; putative acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D AURUGA1_00901 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:auw01040] D AURUGA1_00085 fadE; putative acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D AURUGA1_00613 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:auw00230] D AURUGA1_00075 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AURUGA1_00346 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AURUGA1_01519 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AURUGA1_01477 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D AURUGA1_01435 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AURUGA1_01498 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D AURUGA1_01495 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D AURUGA1_01496 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AURUGA1_01518 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D AURUGA1_01290 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D AURUGA1_01289 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D AURUGA1_00055 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AURUGA1_01434 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AURUGA1_00546 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AURUGA1_01302 punA_1; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D AURUGA1_01367 punA_2; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D AURUGA1_00117 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D AURUGA1_00221 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AURUGA1_00222 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AURUGA1_00731 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AURUGA1_00523 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D AURUGA1_00217 guaA_1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AURUGA1_01422 guaA_3; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AURUGA1_00854 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D AURUGA1_00326 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AURUGA1_00327 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AURUGA1_00961 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D AURUGA1_00878 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AURUGA1_01506 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AURUGA1_01303 Aminodeoxyfutalosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D AURUGA1_00186 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AURUGA1_00888 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] C 00240 Pyrimidine metabolism [PATH:auw00240] D AURUGA1_00856 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AURUGA1_00857 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AURUGA1_00860 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AURUGA1_00859 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AURUGA1_00805 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D AURUGA1_01510 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D AURUGA1_00855 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D AURUGA1_00572 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D AURUGA1_00731 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AURUGA1_01299 yceF; Maf-like protein YceF K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D AURUGA1_00678 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D AURUGA1_00686 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D AURUGA1_01363 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D AURUGA1_00861 pyrR; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D AURUGA1_01370 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D AURUGA1_01595 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D AURUGA1_00326 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AURUGA1_00327 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AURUGA1_01334 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D AURUGA1_00907 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AURUGA1_01369 pdp; Pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D AURUGA1_01347 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D AURUGA1_01046 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:auw00250] D AURUGA1_01398 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AURUGA1_00468 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AURUGA1_00660 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D AURUGA1_00658 asnB; Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AURUGA1_01159 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D AURUGA1_00545 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D AURUGA1_01375 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AURUGA1_00656 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AURUGA1_01506 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AURUGA1_00055 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AURUGA1_00860 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AURUGA1_00526 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AURUGA1_01325 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_01423 gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_00604 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_00835 gltB_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AURUGA1_00834 gltB_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AURUGA1_00504 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AURUGA1_00925 glnA_1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00927 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00554 glnT; Glutamine synthetase 3 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01416 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01421 glnA_3; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00856 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AURUGA1_00857 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AURUGA1_01496 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AURUGA1_00199 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AURUGA1_01519 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:auw00260] D AURUGA1_01353 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AURUGA1_01352 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AURUGA1_01211 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AURUGA1_01209 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D AURUGA1_01210 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D AURUGA1_01571 ltaE; Low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D AURUGA1_00267 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AURUGA1_00284 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AURUGA1_01092 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AURUGA1_00306 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AURUGA1_00778 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AURUGA1_00473 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AURUGA1_00471 gcvT_2; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_00472 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D AURUGA1_00500 prr; Gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D AURUGA1_00332 tdcG; L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AURUGA1_00388 tdcB; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AURUGA1_00837 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AURUGA1_00838 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:auw00270] D AURUGA1_01202 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AURUGA1_01201 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47] D AURUGA1_00324 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AURUGA1_00331 mmuM; Homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D AURUGA1_00093 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AURUGA1_00851 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AURUGA1_00229 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AURUGA1_01279 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AURUGA1_01353 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AURUGA1_01352 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AURUGA1_01211 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AURUGA1_01258 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AURUGA1_00971 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D AURUGA1_01065 mdeA_1; Methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D AURUGA1_01255 mdeA_2; Methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D AURUGA1_01090 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AURUGA1_01398 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AURUGA1_00896 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AURUGA1_00332 tdcG; L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D AURUGA1_01092 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AURUGA1_00306 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:auw00280] D AURUGA1_01090 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AURUGA1_00059 bkdA; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D AURUGA1_00060 bkdB; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D AURUGA1_00061 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_00901 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AURUGA1_01300 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D AURUGA1_01295 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D AURUGA1_00438 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00526 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:auw00290] D AURUGA1_00388 tdcB; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AURUGA1_01083 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AURUGA1_01082 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AURUGA1_01091 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D AURUGA1_01097 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AURUGA1_01096 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AURUGA1_01095 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AURUGA1_01098 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AURUGA1_01090 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AURUGA1_00774 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:auw00300] D AURUGA1_01211 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AURUGA1_01353 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AURUGA1_01352 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AURUGA1_01045 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AURUGA1_00566 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D AURUGA1_00490 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D AURUGA1_00491 dapE_1; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AURUGA1_01027 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AURUGA1_01212 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AURUGA1_01608 lysN; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D AURUGA1_01100 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AURUGA1_01007 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:auw00310] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_00516 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D AURUGA1_00526 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AURUGA1_01325 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_01423 gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_00604 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:auw00220] D AURUGA1_00654 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D AURUGA1_01375 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AURUGA1_00656 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AURUGA1_01496 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AURUGA1_00925 glnA_1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00927 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00554 glnT; Glutamine synthetase 3 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01416 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01421 glnA_3; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00856 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AURUGA1_00857 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AURUGA1_01398 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AURUGA1_00134 argA; Amino-acid acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D AURUGA1_00652 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D AURUGA1_00653 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D AURUGA1_00651 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] C 00330 Arginine and proline metabolism [PATH:auw00330] D AURUGA1_00256 speA_1; Arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D AURUGA1_00314 speA_2; Arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D AURUGA1_01404 aguA; Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01432 Acetyltransferase (GNAT) family protein K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D AURUGA1_00253 mdlY; Mandelamide hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AURUGA1_01419 puuC; Aldehyde dehydrogenase PuuC K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D AURUGA1_01545 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D AURUGA1_00504 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AURUGA1_00742 proB_1; Glutamate 5-kinase 1 K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AURUGA1_00745 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D AURUGA1_01398 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:auw00340] D AURUGA1_00845 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D AURUGA1_00846 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D AURUGA1_00843 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D AURUGA1_00638 priA_1; Phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D AURUGA1_00637 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D AURUGA1_00844 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D AURUGA1_00636 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D AURUGA1_01392 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AURUGA1_00635 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AURUGA1_01140 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D AURUGA1_00803 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D AURUGA1_01133 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D AURUGA1_01134 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D AURUGA1_01135 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D AURUGA1_01136 hutG; Formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:auw00350] D AURUGA1_01398 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AURUGA1_01392 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AURUGA1_00635 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AURUGA1_00257 ddc_1; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D AURUGA1_01420 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AURUGA1_01410 hpcB; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15] D AURUGA1_00421 ligC; 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D AURUGA1_01325 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_01423 gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_00604 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:auw00360] D AURUGA1_00257 ddc_1; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D AURUGA1_01398 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AURUGA1_01392 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AURUGA1_00635 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AURUGA1_00951 katG; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D AURUGA1_00253 mdlY; Mandelamide hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AURUGA1_00974 hcaC; 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D AURUGA1_00408 thcD_1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:auw00380] D AURUGA1_01492 kynA; Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D AURUGA1_01494 kynU; Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D AURUGA1_01411 betB_2; NAD/NADP-dependent betaine aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_00516 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D AURUGA1_00257 ddc_1; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00253 mdlY; Mandelamide hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AURUGA1_00951 katG; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:auw00400] D AURUGA1_00719 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AURUGA1_00865 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D AURUGA1_00864 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D AURUGA1_00866 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D AURUGA1_01243 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D AURUGA1_00867 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D AURUGA1_00842 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AURUGA1_00816 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D AURUGA1_00638 priA_1; Phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D AURUGA1_00839 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D AURUGA1_00837 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AURUGA1_00838 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AURUGA1_01502 pchB; Salicylate biosynthesis protein PchB K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D AURUGA1_00685 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D AURUGA1_00076 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D AURUGA1_01398 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AURUGA1_01392 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AURUGA1_00635 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:auw00410] D AURUGA1_00526 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AURUGA1_01465 davT_2; 5-aminovalerate aminotransferase DavT K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00125 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AURUGA1_00085 fadE; putative acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D AURUGA1_00438 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:auw00430] D AURUGA1_01159 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D AURUGA1_01465 davT_2; 5-aminovalerate aminotransferase DavT K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:auw00450] D AURUGA1_00971 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D AURUGA1_00324 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AURUGA1_00093 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AURUGA1_01606 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D AURUGA1_00338 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D AURUGA1_00267 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:auw00470] D AURUGA1_00201 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AURUGA1_01078 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AURUGA1_01609 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AURUGA1_01496 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D AURUGA1_00521 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D AURUGA1_01005 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AURUGA1_00660 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D AURUGA1_01027 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AURUGA1_01212 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:auw00480] D AURUGA1_01062 ybdK; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D AURUGA1_00917 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AURUGA1_00617 pepN_1; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AURUGA1_01456 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AURUGA1_00351 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D AURUGA1_00983 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AURUGA1_01143 gpx1; Hydroperoxy fatty acid reductase gpx1 K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:auw00515] D AURUGA1_00333 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:auw00514] D AURUGA1_00333 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:auw00542] D AURUGA1_01197 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:auw00541] D AURUGA1_01486 gtaB_2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AURUGA1_01259 gtaB_1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AURUGA1_01346 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AURUGA1_01218 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AURUGA1_01245 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AURUGA1_01217 novW; dTDP-4-dehydrorhamnose 3-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AURUGA1_01205 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D AURUGA1_01285 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D AURUGA1_01280 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AURUGA1_01368 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D AURUGA1_01304 algA; Alginate biosynthesis protein AlgA K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AURUGA1_00345 glmU_1; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AURUGA1_01214 algD_1; GDP-mannose 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D AURUGA1_01237 algD_2; GDP-mannose 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 00550 Peptidoglycan biosynthesis [PATH:auw00550] D AURUGA1_01081 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AURUGA1_01400 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AURUGA1_01002 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AURUGA1_01005 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AURUGA1_01100 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AURUGA1_01078 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AURUGA1_01609 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AURUGA1_01007 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AURUGA1_00965 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AURUGA1_00791 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AURUGA1_01006 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AURUGA1_01003 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AURUGA1_01008 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AURUGA1_00021 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D AURUGA1_00074 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D AURUGA1_00065 UDP-N-acetylmuramate--L-alanine ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D AURUGA1_00066 cobQ; Cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:auw00552] D AURUGA1_00791 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AURUGA1_01197 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AURUGA1_01288 brpA; Biofilm regulatory protein A precursor K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:auw00543] D AURUGA1_01197 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AURUGA1_01202 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AURUGA1_01115 pgaC; Poly-beta-1,6-N-acetyl-D-glucosamine synthase K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:auw00730] D AURUGA1_00466 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AURUGA1_00586 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AURUGA1_00903 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AURUGA1_01076 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D AURUGA1_01244 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AURUGA1_00186 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:auw00740] D AURUGA1_01321 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AURUGA1_01319 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AURUGA1_00078 Putative phosphatase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104] D AURUGA1_01322 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D AURUGA1_01320 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D AURUGA1_00542 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism [PATH:auw00750] D AURUGA1_00323 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D AURUGA1_00306 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AURUGA1_01210 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D AURUGA1_00887 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D AURUGA1_00886 pdxT; Glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:auw00760] D AURUGA1_00468 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AURUGA1_00469 nadA; Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D AURUGA1_00467 nadC; Nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D AURUGA1_01302 punA_1; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D AURUGA1_01367 punA_2; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D AURUGA1_00747 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D AURUGA1_01108 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D AURUGA1_00928 nadE; Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D AURUGA1_01035 cinA; Putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D AURUGA1_00676 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D AURUGA1_01325 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_01423 gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AURUGA1_00604 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:auw00770] D AURUGA1_01097 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AURUGA1_01096 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AURUGA1_01095 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AURUGA1_01098 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AURUGA1_00929 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D AURUGA1_00125 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AURUGA1_00198 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D AURUGA1_00852 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D AURUGA1_01073 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D AURUGA1_00827 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D AURUGA1_00200 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D AURUGA1_01490 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D AURUGA1_01090 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:auw00780] D AURUGA1_00944 kasB; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AURUGA1_00777 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AURUGA1_00033 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AURUGA1_01294 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:auw00785] D AURUGA1_00921 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D AURUGA1_00922 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_00939 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AURUGA1_00919 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AURUGA1_01240 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D AURUGA1_00059 bkdA; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D AURUGA1_00060 bkdB; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D AURUGA1_00061 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D AURUGA1_00473 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D AURUGA1_00471 gcvT_2; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AURUGA1_00472 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:auw00790] D AURUGA1_00119 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D AURUGA1_00121 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D AURUGA1_00122 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D AURUGA1_00120 folP1; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D AURUGA1_00729 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D AURUGA1_01321 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AURUGA1_00018 pabA; Aminodeoxychorismate/anthranilate synthase component 2 K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D AURUGA1_01018 pabB; Aminodeoxychorismate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] C 00670 One carbon pool by folate [PATH:auw00670] D AURUGA1_00268 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AURUGA1_00267 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AURUGA1_01435 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AURUGA1_01434 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AURUGA1_00849 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AURUGA1_00471 gcvT_2; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D AURUGA1_00093 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AURUGA1_01046 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D AURUGA1_00266 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AURUGA1_00632 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AURUGA1_00319 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:auw00860] D AURUGA1_01089 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AURUGA1_00106 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D AURUGA1_00102 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AURUGA1_01464 hemL1; Glutamate-1-semialdehyde 2,1-aminomutase 1 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AURUGA1_00103 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AURUGA1_00105 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D AURUGA1_00104 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D AURUGA1_00040 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D AURUGA1_00107 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D AURUGA1_00108 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D AURUGA1_00110 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D AURUGA1_00978 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AURUGA1_00977 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:auw00130] D AURUGA1_01523 ubiE; Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D AURUGA1_01524 dhbC; Isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D AURUGA1_01525 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D AURUGA1_01531 ykfB; L-Ala-D/L-Glu epimerase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D AURUGA1_01529 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D AURUGA1_01530 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D AURUGA1_01528 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:auw00900] D AURUGA1_00903 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D AURUGA1_00527 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D AURUGA1_00288 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D AURUGA1_00341 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D AURUGA1_00529 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D AURUGA1_00430 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D AURUGA1_01592 idi; Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D AURUGA1_01591 (2E,6E)-farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D AURUGA1_01013 hexs-b; Hexaprenyl-diphosphate synthase large subunit ((2E,6E)-farnesyl-diphosphate specific) K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D AURUGA1_00394 (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D AURUGA1_00965 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:auw00906] D AURUGA1_01590 crtB; 15-cis-phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:auw00907] D AURUGA1_00901 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D AURUGA1_00980 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:auw00523] D AURUGA1_01218 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AURUGA1_01245 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AURUGA1_01217 novW; dTDP-4-dehydrorhamnose 3-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AURUGA1_01220 wbiB; dTDP-L-rhamnose 4-epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25] C 01054 Nonribosomal peptide structures [PATH:auw01054] D AURUGA1_00660 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides D AURUGA1_01524 dhbC; Isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D AURUGA1_01245 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:auw00332] D AURUGA1_00742 proB_1; Glutamate 5-kinase 1 K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AURUGA1_00745 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:auw00261] D AURUGA1_01353 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AURUGA1_01352 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AURUGA1_01045 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AURUGA1_00566 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:auw00521] D AURUGA1_00717 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D AURUGA1_00075 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AURUGA1_01453 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AURUGA1_00442 iolG; Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D AURUGA1_01218 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AURUGA1_01245 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AURUGA1_01217 novW; dTDP-4-dehydrorhamnose 3-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D AURUGA1_00717 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:auw00525] D AURUGA1_01218 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AURUGA1_01245 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:auw00401] D AURUGA1_00685 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D AURUGA1_01398 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AURUGA1_01392 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AURUGA1_00635 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D AURUGA1_00842 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D AURUGA1_00941 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AURUGA1_00777 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AURUGA1_00033 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D AURUGA1_00943 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D AURUGA1_00851 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:auw00362] D AURUGA1_00901 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D AURUGA1_01411 betB_2; NAD/NADP-dependent betaine aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D AURUGA1_00419 ligA_1; Protocatechuate 4,5-dioxygenase alpha chain K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D AURUGA1_00420 ligB; Protocatechuate 4,5-dioxygenase beta chain K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D AURUGA1_00421 ligC; 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D AURUGA1_00418 ligI; 2-pyrone-4,6-dicarbaxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D AURUGA1_00416 galD; 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D AURUGA1_00417 Amidohydrolase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83] D AURUGA1_00415 galC; 4-carboxy-4-hydroxy-2-oxoadipic acid aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D AURUGA1_00408 thcD_1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D AURUGA1_00407 thcC; Rhodocoxin K04755 fdx; ferredoxin, 2Fe-2S D AURUGA1_00412 pobA; p-hydroxybenzoate hydroxylase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D AURUGA1_00516 acdA; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] C 00627 Aminobenzoate degradation [PATH:auw00627] D AURUGA1_00253 mdlY; Mandelamide hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D AURUGA1_00419 ligA_1; Protocatechuate 4,5-dioxygenase alpha chain K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D AURUGA1_00420 ligB; Protocatechuate 4,5-dioxygenase beta chain K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D AURUGA1_00421 ligC; 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D AURUGA1_00418 ligI; 2-pyrone-4,6-dicarbaxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] C 00364 Fluorobenzoate degradation [PATH:auw00364] D AURUGA1_00092 clcD; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:auw00625] D AURUGA1_01420 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D AURUGA1_00544 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_00410 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D AURUGA1_01365 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:auw00361] D AURUGA1_00092 clcD; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:auw00623] D AURUGA1_00092 clcD; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation D AURUGA1_01411 betB_2; NAD/NADP-dependent betaine aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D AURUGA1_00901 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:auw00643] D AURUGA1_00253 mdlY; Mandelamide hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:auw00626] D AURUGA1_01420 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D AURUGA1_00419 ligA_1; Protocatechuate 4,5-dioxygenase alpha chain K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D AURUGA1_00420 ligB; Protocatechuate 4,5-dioxygenase beta chain K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:auw03020] D AURUGA1_00156 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AURUGA1_00157 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AURUGA1_00192 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AURUGA1_00853 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D AURUGA1_00301 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:auw03010] D AURUGA1_00828 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1 D AURUGA1_00570 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AURUGA1_00172 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AURUGA1_00873 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AURUGA1_00182 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AURUGA1_01602 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AURUGA1_00160 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AURUGA1_00179 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AURUGA1_00196 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AURUGA1_00165 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AURUGA1_00191 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AURUGA1_00159 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AURUGA1_00190 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AURUGA1_00049 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AURUGA1_00561 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AURUGA1_01061 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AURUGA1_00175 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AURUGA1_01600 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18 D AURUGA1_00170 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AURUGA1_00762 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AURUGA1_01393 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AURUGA1_00169 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AURUGA1_00166 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AURUGA1_00167 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AURUGA1_00178 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AURUGA1_00180 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AURUGA1_01385 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AURUGA1_01599 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AURUGA1_01386 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AURUGA1_01394 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AURUGA1_00195 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AURUGA1_00176 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AURUGA1_00184 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AURUGA1_00173 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AURUGA1_00193 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AURUGA1_00181 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AURUGA1_01057 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AURUGA1_00646 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AURUGA1_00171 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AURUGA1_00168 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AURUGA1_00177 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AURUGA1_00352 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D AURUGA1_00738 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AURUGA1_00047 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AURUGA1_00174 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AURUGA1_00183 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AURUGA1_00782 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D AURUGA1_01174 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AURUGA1_00048 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D AURUGA1_01617 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D AURUGA1_00645 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AURUGA1_00661 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AURUGA1_00663 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AURUGA1_00664 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:auw00970] D AURUGA1_00009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AURUGA1_00750 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AURUGA1_01565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AURUGA1_01234 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AURUGA1_00310 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AURUGA1_00605 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AURUGA1_00958 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AURUGA1_00112 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AURUGA1_00891 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AURUGA1_00344 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AURUGA1_01088 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AURUGA1_00113 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AURUGA1_01085 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AURUGA1_00892 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AURUGA1_00624 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AURUGA1_00602 tRNA-His K14226 tRNA-His; tRNA His D AURUGA1_00008 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AURUGA1_00790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AURUGA1_00026 tRNA-Ser K14228 tRNA-Leu; tRNA Leu D AURUGA1_00832 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AURUGA1_00367 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AURUGA1_01176 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AURUGA1_00274 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AURUGA1_01158 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AURUGA1_01449 tRNA-Met K14230 tRNA-Met; tRNA Met D AURUGA1_01139 tRNA-Met K14230 tRNA-Met; tRNA Met D AURUGA1_00952 tRNA-Met K14230 tRNA-Met; tRNA Met D AURUGA1_00111 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AURUGA1_00690 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AURUGA1_00625 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AURUGA1_00081 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AURUGA1_01356 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AURUGA1_00140 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AURUGA1_00079 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AURUGA1_01326 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AURUGA1_00292 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AURUGA1_01450 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AURUGA1_01397 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AURUGA1_01459 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AURUGA1_00937 tRNA-Val K14237 tRNA-Val; tRNA Val D AURUGA1_00890 tRNA-Val K14237 tRNA-Val; tRNA Val D AURUGA1_01089 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AURUGA1_00592 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AURUGA1_00593 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D AURUGA1_00591 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D AURUGA1_00871 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AURUGA1_00035 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D AURUGA1_00889 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AURUGA1_00077 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AURUGA1_00289 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AURUGA1_00338 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AURUGA1_00849 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AURUGA1_00727 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AURUGA1_01017 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AURUGA1_00728 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AURUGA1_00126 lysX; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AURUGA1_01236 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AURUGA1_00531 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AURUGA1_00361 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AURUGA1_00648 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AURUGA1_00649 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AURUGA1_00657 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AURUGA1_01318 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:auw03060] D AURUGA1_00185 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AURUGA1_01396 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AURUGA1_00987 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AURUGA1_00880 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AURUGA1_00879 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AURUGA1_00881 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AURUGA1_01614 misCA; Membrane protein insertase MisCA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D AURUGA1_01273 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AURUGA1_01071 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AURUGA1_01072 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D AURUGA1_00798 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D AURUGA1_00495 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D AURUGA1_00799 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC D AURUGA1_01056 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D AURUGA1_00995 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:auw04122] D AURUGA1_00466 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AURUGA1_00586 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AURUGA1_00896 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D AURUGA1_00587 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:auw03018] D AURUGA1_00362 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AURUGA1_00562 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AURUGA1_01207 hypothetical protein K03628 rho; transcription termination factor Rho D AURUGA1_01044 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D AURUGA1_01583 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D AURUGA1_00297 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AURUGA1_00279 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AURUGA1_00090 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AURUGA1_01603 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:auw03030] D AURUGA1_00783 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AURUGA1_00802 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AURUGA1_01355 dnaX_2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AURUGA1_01333 dnaX_1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AURUGA1_00761 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AURUGA1_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AURUGA1_01598 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AURUGA1_00960 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AURUGA1_00608 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein D AURUGA1_01601 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AURUGA1_00933 bifunctional RNase H/acid phosphatase K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AURUGA1_01055 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AURUGA1_00829 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AURUGA1_00588 ligA_2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:auw03410] D AURUGA1_01252 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D AURUGA1_00537 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AURUGA1_01172 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AURUGA1_00619 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D AURUGA1_00496 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AURUGA1_01317 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AURUGA1_01566 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AURUGA1_00829 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AURUGA1_00588 ligA_2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:auw03420] D AURUGA1_00355 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AURUGA1_00825 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D AURUGA1_00826 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D AURUGA1_00824 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D AURUGA1_01107 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AURUGA1_01110 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AURUGA1_01441 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AURUGA1_00829 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AURUGA1_00588 ligA_2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AURUGA1_00301 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:auw03430] D AURUGA1_01107 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AURUGA1_01110 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AURUGA1_01441 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AURUGA1_00429 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AURUGA1_00427 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AURUGA1_00608 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein D AURUGA1_01601 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AURUGA1_00802 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AURUGA1_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AURUGA1_01355 dnaX_2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AURUGA1_00761 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AURUGA1_01333 dnaX_1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AURUGA1_00783 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AURUGA1_00588 ligA_2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:auw03440] D AURUGA1_00608 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein D AURUGA1_01601 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AURUGA1_00003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D AURUGA1_00966 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D AURUGA1_01354 recR; Recombination protein RecR K06187 recR; recombination protein RecR D AURUGA1_01032 recombinase A K03553 recA; recombination protein RecA D AURUGA1_00829 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AURUGA1_00883 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AURUGA1_00882 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AURUGA1_00884 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AURUGA1_01074 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AURUGA1_00802 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AURUGA1_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AURUGA1_01355 dnaX_2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AURUGA1_00761 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AURUGA1_01333 dnaX_1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AURUGA1_00783 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AURUGA1_00850 priA_2; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:auw03250] D AURUGA1_00013 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:auw02010] D AURUGA1_01069 ssuA; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein D AURUGA1_01068 ssuC; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D AURUGA1_01070 ssuB; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AURUGA1_00335 fbpA; Iron-utilization periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D AURUGA1_00336 cysW; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein D AURUGA1_00337 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AURUGA1_00753 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AURUGA1_01374 tmpC; Membrane lipoprotein TmpC precursor K07335 bmpA; basic membrane protein A and related proteins D AURUGA1_01372 ribose ABC transporter permease protein K23535 nupB; general nucleoside transport system permease protein D AURUGA1_01371 Branched-chain amino acid transport system / permease component K23536 nupC; general nucleoside transport system permease protein D AURUGA1_01373 rbsA_2; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein D AURUGA1_01380 xylF; D-xylose-binding periplasmic protein precursor K10543 xylF; D-xylose transport system substrate-binding protein D AURUGA1_01382 xylH; Xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein D AURUGA1_01381 rbsA_3; Ribose import ATP-binding protein RbsA K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D AURUGA1_01469 pstS3; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein D AURUGA1_01468 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D AURUGA1_01467 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D AURUGA1_01466 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AURUGA1_00211 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AURUGA1_00212 braC_1; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D AURUGA1_00213 braC_2; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D AURUGA1_00223 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D AURUGA1_00224 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D AURUGA1_00225 lptB; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D AURUGA1_00226 livF; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D AURUGA1_00479 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein D AURUGA1_00480 dppB; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D AURUGA1_00481 gsiD; Glutathione transport system permease protein GsiD K15582 oppC; oligopeptide transport system permease protein D AURUGA1_00482 gsiA; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D AURUGA1_00970 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D AURUGA1_00598 ykoC; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein D AURUGA1_01152 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AURUGA1_01153 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein C 02060 Phosphotransferase system (PTS) [PATH:auw02060] D AURUGA1_01309 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D AURUGA1_01315 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D AURUGA1_01314 fruA_3; PTS system fructose-specific EIIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D AURUGA1_01312 fruA_1; PTS system fructose-specific EIIABC component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D AURUGA1_01311 lacC_1; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D AURUGA1_01387 lacC_2; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:auw03070] D AURUGA1_00880 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AURUGA1_00879 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AURUGA1_01396 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AURUGA1_00987 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AURUGA1_00185 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AURUGA1_00881 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AURUGA1_01614 misCA; Membrane protein insertase MisCA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D AURUGA1_01273 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AURUGA1_01072 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D AURUGA1_01071 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AURUGA1_00798 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D AURUGA1_00495 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D AURUGA1_00799 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:auw02020] D AURUGA1_01471 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D AURUGA1_01472 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D AURUGA1_01469 pstS3; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein D AURUGA1_00977 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D AURUGA1_01116 degP; Periplasmic serine endoprotease DegP precursor K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D AURUGA1_01277 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D AURUGA1_01278 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D AURUGA1_00001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D AURUGA1_00074 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D AURUGA1_01430 citE; Citrate lyase subunit beta-like protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D AURUGA1_00398 Citrate lyase subunit beta-like protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D AURUGA1_01340 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AURUGA1_01186 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AURUGA1_01339 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B D AURUGA1_01185 hypothetical protein K12510 tadB; tight adherence protein B D AURUGA1_01184 Bacterial type II secretion system protein F domain protein K12511 tadC; tight adherence protein C D AURUGA1_00925 glnA_1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00927 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00554 glnT; Glutamine synthetase 3 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01416 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01421 glnA_3; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01214 algD_1; GDP-mannose 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D AURUGA1_01237 algD_2; GDP-mannose 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:auw02024] D AURUGA1_00842 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AURUGA1_00719 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AURUGA1_00211 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AURUGA1_00212 braC_1; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D AURUGA1_00213 braC_2; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D AURUGA1_00223 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D AURUGA1_00224 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D AURUGA1_00225 lptB; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D AURUGA1_00226 livF; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D AURUGA1_01165 Fibronectin type III domain protein K20276 bapA; large repetitive protein D AURUGA1_00716 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AURUGA1_01319 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AURUGA1_00029 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AURUGA1_00479 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein D AURUGA1_00480 dppB; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D AURUGA1_00481 gsiD; Glutathione transport system permease protein GsiD K15582 oppC; oligopeptide transport system permease protein D AURUGA1_00482 gsiA; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D AURUGA1_01614 misCA; Membrane protein insertase MisCA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D AURUGA1_01396 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AURUGA1_00987 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AURUGA1_00185 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AURUGA1_00881 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AURUGA1_01273 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AURUGA1_01072 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D AURUGA1_01071 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D AURUGA1_00915 hrdB; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D AURUGA1_00362 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D AURUGA1_00093 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:auw01501] D AURUGA1_00757 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AURUGA1_00479 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein D AURUGA1_00480 dppB; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D AURUGA1_00481 gsiD; Glutathione transport system permease protein GsiD K15582 oppC; oligopeptide transport system permease protein D AURUGA1_00482 gsiA; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D AURUGA1_01008 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:auw01502] D AURUGA1_01078 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AURUGA1_01609 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AURUGA1_00201 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AURUGA1_01007 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AURUGA1_01006 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AURUGA1_01003 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AURUGA1_00074 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance D AURUGA1_00013 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:auw01000] C 01001 Protein kinases [BR:auw01001] D AURUGA1_01016 spk1; Serine/threonine-protein kinase PK-1 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D AURUGA1_00019 prkC; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D AURUGA1_00020 pknA; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D AURUGA1_01471 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D AURUGA1_01277 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D AURUGA1_01388 tcrY_2; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AURUGA1_00299 tcrY_1; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AURUGA1_01264 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:auw01009] D AURUGA1_01279 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AURUGA1_01167 stp_2; Serine/threonine phosphatase stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D AURUGA1_00023 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D AURUGA1_00778 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:auw01002] D AURUGA1_00995 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D AURUGA1_00396 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AURUGA1_00217 guaA_1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AURUGA1_01422 guaA_3; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AURUGA1_00553 Putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D AURUGA1_01412 Putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D AURUGA1_00308 iap; putative endopeptidase p60 precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D AURUGA1_01519 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AURUGA1_00835 gltB_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AURUGA1_00199 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AURUGA1_00658 asnB; Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AURUGA1_00016 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D AURUGA1_00478 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein D AURUGA1_00617 pepN_1; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AURUGA1_00034 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D AURUGA1_00074 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D AURUGA1_00917 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AURUGA1_00491 dapE_1; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AURUGA1_00931 map_2; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D AURUGA1_00187 map_1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D AURUGA1_00507 pepPI; Xaa-Pro aminopeptidase 1 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D AURUGA1_00118 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AURUGA1_00387 hypothetical protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D AURUGA1_01116 degP; Periplasmic serine endoprotease DegP precursor K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D AURUGA1_00629 clpP2_1; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D AURUGA1_00630 clpP2_2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D AURUGA1_01104 lon1; Lon protease 1 K07177 K07177; Lon-like protease D AURUGA1_00633 lexA_2; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D AURUGA1_00623 lexA_1; LexA repressor K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AURUGA1_01056 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] C 01003 Glycosyltransferases [BR:auw01003] D AURUGA1_01292 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D AURUGA1_00333 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D AURUGA1_01484 mgtA_2; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D AURUGA1_00780 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D AURUGA1_01197 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D AURUGA1_01115 pgaC; Poly-beta-1,6-N-acetyl-D-glucosamine synthase K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] D AURUGA1_01208 wbbL_1; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] C 01005 Lipopolysaccharide biosynthesis proteins [BR:auw01005] D AURUGA1_01145 hypothetical protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D AURUGA1_01197 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:auw01011] D AURUGA1_01081 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AURUGA1_01400 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AURUGA1_01002 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AURUGA1_01005 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AURUGA1_01100 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AURUGA1_01078 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AURUGA1_01609 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AURUGA1_00201 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AURUGA1_00521 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D AURUGA1_01006 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AURUGA1_01003 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AURUGA1_00791 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AURUGA1_01605 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D AURUGA1_01008 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AURUGA1_00021 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D AURUGA1_00074 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D AURUGA1_00308 iap; putative endopeptidase p60 precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D AURUGA1_00016 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D AURUGA1_00869 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:auw01004] D AURUGA1_00941 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AURUGA1_00942 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AURUGA1_00944 kasB; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AURUGA1_00777 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AURUGA1_00033 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AURUGA1_00613 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D AURUGA1_01341 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AURUGA1_00669 acsA_1; Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D AURUGA1_00716 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AURUGA1_00718 plsC_1; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AURUGA1_01080 plsC_2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:auw01008] D AURUGA1_00660 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:auw01006] D AURUGA1_01013 hexs-b; Hexaprenyl-diphosphate synthase large subunit ((2E,6E)-farnesyl-diphosphate specific) K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D AURUGA1_01591 (2E,6E)-farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D AURUGA1_00394 (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D AURUGA1_00965 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AURUGA1_01590 crtB; 15-cis-phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D AURUGA1_01028 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AURUGA1_01528 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D AURUGA1_00978 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:auw01007] D AURUGA1_01089 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AURUGA1_00657 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AURUGA1_01318 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AURUGA1_00289 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AURUGA1_01236 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AURUGA1_00338 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AURUGA1_00728 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AURUGA1_00727 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AURUGA1_01017 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AURUGA1_00126 lysX; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AURUGA1_00361 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AURUGA1_00035 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D AURUGA1_00077 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AURUGA1_00531 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AURUGA1_00889 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AURUGA1_00871 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AURUGA1_00648 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AURUGA1_00649 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AURUGA1_01398 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AURUGA1_01392 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AURUGA1_00635 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AURUGA1_00324 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AURUGA1_00526 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D AURUGA1_00102 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AURUGA1_01464 hemL1; Glutamate-1-semialdehyde 2,1-aminomutase 1 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AURUGA1_01090 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AURUGA1_00306 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AURUGA1_01205 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 [BR:auw00199] C 00194 Photosynthesis proteins [BR:auw00194] D AURUGA1_01188 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AURUGA1_01189 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AURUGA1_01190 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AURUGA1_01191 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AURUGA1_01192 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AURUGA1_01193 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AURUGA1_01194 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AURUGA1_01195 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:auw03000] D AURUGA1_00229 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AURUGA1_01310 srlR; Glucitol operon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D AURUGA1_01594 DNA-binding transcriptional repressor AcrR K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D AURUGA1_00499 asnC_2; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D AURUGA1_01413 mgrA; HTH-type transcriptional regulator MgrA K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D AURUGA1_01580 hspR; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D AURUGA1_00046 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D AURUGA1_01473 arsR; Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D AURUGA1_00357 anaerobic benzoate catabolism transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D AURUGA1_01034 clgR; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator D AURUGA1_00307 ideR; Iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D AURUGA1_01294 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AURUGA1_00504 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D AURUGA1_01250 whiB1; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D AURUGA1_01284 whiB; Transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D AURUGA1_01610 spo0C; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AURUGA1_00287 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D AURUGA1_00766 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D AURUGA1_00861 pyrR; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D AURUGA1_00804 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D AURUGA1_01011 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:auw03021] D AURUGA1_00301 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D AURUGA1_00192 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AURUGA1_00156 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AURUGA1_00157 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AURUGA1_00853 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AURUGA1_00915 hrdB; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor D AURUGA1_01242 sigR; ECF RNA polymerase sigma factor SigR K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D AURUGA1_00532 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA D AURUGA1_00862 hypothetical protein K03625 nusB; transcription antitermination protein NusB D AURUGA1_01395 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG D AURUGA1_00389 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D AURUGA1_01207 hypothetical protein K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:auw03019] D AURUGA1_01173 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D AURUGA1_01044 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D AURUGA1_00603 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AURUGA1_00362 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AURUGA1_00562 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AURUGA1_01207 hypothetical protein K03628 rho; transcription termination factor Rho D AURUGA1_01583 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D AURUGA1_00297 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AURUGA1_00279 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AURUGA1_00090 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AURUGA1_01603 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D AURUGA1_00993 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ D AURUGA1_00800 hrpB_2; ATP-dependent RNA helicase HrpB K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D AURUGA1_00329 hrpB_1; ATP-dependent RNA helicase HrpB K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:auw03011] D AURUGA1_00828 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1 D AURUGA1_00570 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AURUGA1_00172 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AURUGA1_00873 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AURUGA1_00182 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AURUGA1_01602 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AURUGA1_00160 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AURUGA1_00179 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AURUGA1_00196 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AURUGA1_00165 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AURUGA1_00191 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AURUGA1_00159 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AURUGA1_00190 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AURUGA1_00049 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AURUGA1_00561 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AURUGA1_01061 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AURUGA1_00175 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AURUGA1_01600 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18 D AURUGA1_00170 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AURUGA1_00762 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AURUGA1_01393 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AURUGA1_00169 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AURUGA1_00166 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AURUGA1_00167 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AURUGA1_00178 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AURUGA1_00180 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AURUGA1_01599 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AURUGA1_01386 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AURUGA1_01394 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AURUGA1_01385 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AURUGA1_00195 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AURUGA1_00176 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AURUGA1_00184 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AURUGA1_00173 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AURUGA1_00193 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AURUGA1_00181 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AURUGA1_01057 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AURUGA1_00646 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AURUGA1_00171 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AURUGA1_00168 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AURUGA1_00177 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AURUGA1_00738 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AURUGA1_00047 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D AURUGA1_00174 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AURUGA1_00183 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AURUGA1_00782 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D AURUGA1_01174 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AURUGA1_00048 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D AURUGA1_01617 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D AURUGA1_00645 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AURUGA1_00352 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D AURUGA1_00664 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AURUGA1_00661 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AURUGA1_00663 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:auw03009] D AURUGA1_01173 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D AURUGA1_00603 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AURUGA1_00773 era; GTPase Era K03595 era; GTPase D AURUGA1_00532 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA D AURUGA1_00862 hypothetical protein K03625 nusB; transcription antitermination protein NusB D AURUGA1_01395 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG D AURUGA1_00340 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D AURUGA1_00848 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D AURUGA1_01577 rlmG; Ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D AURUGA1_01025 rsmC; Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D AURUGA1_01075 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D AURUGA1_00768 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D AURUGA1_01612 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AURUGA1_01010 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D AURUGA1_00334 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D AURUGA1_00675 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D AURUGA1_00290 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D AURUGA1_00316 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D AURUGA1_00684 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D AURUGA1_00994 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D AURUGA1_00204 paiA; Protease synthase and sporulation negative regulatory protein PAI 1 K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D AURUGA1_00320 ydaF_1; Putative ribosomal N-acetyltransferase YdaF K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D AURUGA1_01059 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D AURUGA1_00870 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D AURUGA1_01244 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AURUGA1_00687 der; GTPase Der K03977 engA; GTPase D AURUGA1_01022 hflX; GTPase HflX K03665 hflX; GTPase D AURUGA1_01562 ywlC_2; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AURUGA1_01198 ywlC_1; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AURUGA1_00878 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AURUGA1_00535 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D AURUGA1_00749 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D AURUGA1_00771 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D AURUGA1_00453 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase D AURUGA1_01175 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:auw03016] D AURUGA1_01089 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AURUGA1_00531 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AURUGA1_00728 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AURUGA1_01017 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AURUGA1_00338 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AURUGA1_01236 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AURUGA1_00126 lysX; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AURUGA1_00871 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AURUGA1_00035 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D AURUGA1_00889 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AURUGA1_00077 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AURUGA1_00289 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AURUGA1_00727 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AURUGA1_00361 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AURUGA1_00648 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AURUGA1_00649 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AURUGA1_00657 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AURUGA1_01318 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AURUGA1_00769 hinT; HIT-like protein HinT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AURUGA1_00794 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D AURUGA1_00194 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D AURUGA1_00539 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D AURUGA1_00466 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AURUGA1_00586 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AURUGA1_01562 ywlC_2; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AURUGA1_01198 ywlC_1; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AURUGA1_01028 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AURUGA1_01616 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D AURUGA1_00522 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D AURUGA1_00900 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D AURUGA1_01547 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D AURUGA1_01029 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D AURUGA1_01058 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D AURUGA1_00647 aviRb; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D AURUGA1_00587 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AURUGA1_00282 gcvT_1; Aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D AURUGA1_00116 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D AURUGA1_00203 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D AURUGA1_00205 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D AURUGA1_00202 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D AURUGA1_00562 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AURUGA1_00348 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:auw03012] D AURUGA1_00534 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AURUGA1_00644 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AURUGA1_00571 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D AURUGA1_00162 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D AURUGA1_00161 fusA; Elongation factor G K02355 fusA; elongation factor G D AURUGA1_01206 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D AURUGA1_00573 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor D AURUGA1_01200 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D AURUGA1_00353 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D AURUGA1_00189 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D AURUGA1_00863 efp; Elongation factor P K02356 efp; elongation factor P D AURUGA1_01101 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:auw03110] D AURUGA1_01575 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D AURUGA1_00133 clpC1; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D AURUGA1_00631 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D AURUGA1_01583 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D AURUGA1_00297 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AURUGA1_00767 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D AURUGA1_01581 cbpA; Curved DNA-binding protein K03686 dnaJ; molecular chaperone DnaJ D AURUGA1_01582 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D AURUGA1_00209 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D AURUGA1_00118 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AURUGA1_01195 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AURUGA1_01329 hypothetical protein K09796 pccA; periplasmic copper chaperone A D AURUGA1_00013 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AURUGA1_00875 Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D AURUGA1_00724 trxC; Putative thioredoxin-2 K03671 TXN; thioredoxin D AURUGA1_01607 trxA_2; Thioredoxin-1 K03671 TXN; thioredoxin D AURUGA1_00582 trxA_1; Thioredoxin K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:auw04131] D AURUGA1_00731 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AURUGA1_00990 gap2; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AURUGA1_00704 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AURUGA1_00284 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D AURUGA1_00833 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AURUGA1_01584 Vacuole effluxer Atg22 like protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome [BR:auw03051] D AURUGA1_00796 hypothetical protein K13572 pafB; proteasome accessory factor B D AURUGA1_00797 hypothetical protein K13573 pafC; proteasome accessory factor C C 03032 DNA replication proteins [BR:auw03032] D AURUGA1_00933 bifunctional RNase H/acid phosphatase K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AURUGA1_00229 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AURUGA1_00053 recD2; ATP-dependent RecD-like DNA helicase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D AURUGA1_00050 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D AURUGA1_00001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D AURUGA1_01598 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AURUGA1_00960 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AURUGA1_00608 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein D AURUGA1_01601 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AURUGA1_00802 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AURUGA1_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AURUGA1_00761 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AURUGA1_01333 dnaX_1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AURUGA1_00783 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AURUGA1_01355 dnaX_2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AURUGA1_01055 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AURUGA1_00829 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AURUGA1_00588 ligA_2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AURUGA1_00006 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AURUGA1_00912 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AURUGA1_00913 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AURUGA1_00005 gyrBR; DNA gyrase subunit B, novobiocin-resistant K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AURUGA1_01335 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:auw03036] D AURUGA1_00229 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AURUGA1_01173 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D AURUGA1_00050 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D AURUGA1_00001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D AURUGA1_01169 smc; Chromosome partition protein Smc K03529 smc; chromosome segregation protein D AURUGA1_00682 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A D AURUGA1_00683 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B D AURUGA1_01153 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AURUGA1_01008 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AURUGA1_01037 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D AURUGA1_01160 eccCa1; ESX-1 secretion system protein EccCa1 K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D AURUGA1_01001 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D AURUGA1_01004 ftsW_2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D AURUGA1_01152 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AURUGA1_01000 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AURUGA1_00895 primosomal protein DnaI K06916 zapE; cell division protein ZapE D AURUGA1_00996 Cell wall synthesis protein Wag31 K04074 divIVA; cell division initiation protein D AURUGA1_00998 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF D AURUGA1_00681 parA_1; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AURUGA1_01611 parA_3; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AURUGA1_00711 parA_2; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AURUGA1_01610 spo0C; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AURUGA1_01612 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AURUGA1_01052 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D AURUGA1_00680 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D AURUGA1_00501 minD; Septum site-determining protein MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D AURUGA1_00216 fic; putative adenosine monophosphate-protein transferase fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D AURUGA1_00992 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:auw03400] D AURUGA1_00497 ogt; Methylated-DNA--protein-cysteine methyltransferase, constitutive K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D AURUGA1_01549 phr; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D AURUGA1_01252 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D AURUGA1_00537 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AURUGA1_00301 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D AURUGA1_00688 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AURUGA1_00470 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AURUGA1_00907 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AURUGA1_00706 Deoxyribodipyrimidine photo-lyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D AURUGA1_00496 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AURUGA1_01172 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AURUGA1_00619 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D AURUGA1_01317 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AURUGA1_01566 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AURUGA1_00588 ligA_2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AURUGA1_00829 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AURUGA1_00825 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D AURUGA1_00826 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D AURUGA1_00824 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D AURUGA1_01107 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AURUGA1_01110 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AURUGA1_01441 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AURUGA1_00156 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AURUGA1_00157 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AURUGA1_00192 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AURUGA1_00853 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AURUGA1_00355 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AURUGA1_00429 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AURUGA1_00427 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AURUGA1_00802 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AURUGA1_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AURUGA1_00761 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AURUGA1_01333 dnaX_1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AURUGA1_00783 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AURUGA1_01355 dnaX_2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AURUGA1_00608 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein D AURUGA1_01601 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AURUGA1_01032 recombinase A K03553 recA; recombination protein RecA D AURUGA1_00883 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AURUGA1_00882 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AURUGA1_00884 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AURUGA1_00850 priA_2; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D AURUGA1_00139 hypothetical protein K04485 radA; DNA repair protein RadA/Sms D AURUGA1_00003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D AURUGA1_01074 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AURUGA1_00966 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D AURUGA1_01354 recR; Recombination protein RecR K06187 recR; recombination protein RecR D AURUGA1_00677 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D AURUGA1_00006 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AURUGA1_00912 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AURUGA1_00913 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AURUGA1_00005 gyrBR; DNA gyrase subunit B, novobiocin-resistant K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AURUGA1_01335 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AURUGA1_00050 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D AURUGA1_00595 dinB_1; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D AURUGA1_00622 dinB_2; DNA polymerase IV K03502 umuC; DNA polymerase V D AURUGA1_00623 lexA_1; LexA repressor K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AURUGA1_00633 lexA_2; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D AURUGA1_01031 recombination regulator RecX K03565 recX; regulatory protein D AURUGA1_00278 mutT4; Putative mutator protein MutT4 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D AURUGA1_00679 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D AURUGA1_00326 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AURUGA1_00327 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:auw03029] D AURUGA1_00534 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AURUGA1_00644 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AURUGA1_00571 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D AURUGA1_00162 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D AURUGA1_00161 fusA; Elongation factor G K02355 fusA; elongation factor G D AURUGA1_00773 era; GTPase Era K03595 era; GTPase D AURUGA1_00657 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AURUGA1_01017 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AURUGA1_00035 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D AURUGA1_01236 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AURUGA1_00592 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AURUGA1_00593 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D AURUGA1_00591 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D AURUGA1_00053 recD2; ATP-dependent RecD-like DNA helicase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D AURUGA1_00608 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein D AURUGA1_01601 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AURUGA1_01583 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D AURUGA1_01582 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D AURUGA1_00297 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AURUGA1_00209 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D AURUGA1_00767 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D AURUGA1_01581 cbpA; Curved DNA-binding protein K03686 dnaJ; molecular chaperone DnaJ D AURUGA1_00466 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AURUGA1_00586 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AURUGA1_00501 minD; Septum site-determining protein MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D AURUGA1_00978 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D AURUGA1_00977 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D AURUGA1_01614 misCA; Membrane protein insertase MisCA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:auw02000] D AURUGA1_00254 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D AURUGA1_00255 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D AURUGA1_00342 yjjK; putative ABC transporter ATP-binding protein YjjK K15738 uup; ABC transport system ATP-binding/permease protein D AURUGA1_01069 ssuA; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein D AURUGA1_01068 ssuC; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D AURUGA1_01070 ssuB; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D AURUGA1_00335 fbpA; Iron-utilization periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D AURUGA1_00336 cysW; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein D AURUGA1_00337 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AURUGA1_00753 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D AURUGA1_01042 maltose ABC transporter periplasmic protein K25086 musE; maltose transport system substrate-binding protein D AURUGA1_01041 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K25087 musF; maltose transport system permease protein D AURUGA1_01040 araQ; L-arabinose transport system permease protein AraQ K25088 musG; maltose transport system permease protein D AURUGA1_01380 xylF; D-xylose-binding periplasmic protein precursor K10543 xylF; D-xylose transport system substrate-binding protein D AURUGA1_01382 xylH; Xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein D AURUGA1_01381 rbsA_3; Ribose import ATP-binding protein RbsA K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D AURUGA1_01374 tmpC; Membrane lipoprotein TmpC precursor K07335 bmpA; basic membrane protein A and related proteins D AURUGA1_01372 ribose ABC transporter permease protein K23535 nupB; general nucleoside transport system permease protein D AURUGA1_01371 Branched-chain amino acid transport system / permease component K23536 nupC; general nucleoside transport system permease protein D AURUGA1_01373 rbsA_2; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein D AURUGA1_00444 D-ribose transporter subunit RbsB K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D AURUGA1_00445 rbsC; Ribose transport system permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein D AURUGA1_00446 rbsA_1; Ribose import ATP-binding protein RbsA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D AURUGA1_01469 pstS3; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein D AURUGA1_01468 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D AURUGA1_01467 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D AURUGA1_01466 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AURUGA1_00211 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D AURUGA1_00212 braC_1; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D AURUGA1_00213 braC_2; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D AURUGA1_00223 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D AURUGA1_00224 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D AURUGA1_00225 lptB; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D AURUGA1_00226 livF; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D AURUGA1_00479 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein D AURUGA1_00480 dppB; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D AURUGA1_00481 gsiD; Glutathione transport system permease protein GsiD K15582 oppC; oligopeptide transport system permease protein D AURUGA1_00482 gsiA; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D AURUGA1_00781 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D AURUGA1_00970 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D AURUGA1_00095 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component D AURUGA1_00598 ykoC; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein D AURUGA1_00096 ykoD_1; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D AURUGA1_00597 ykoD_2; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D AURUGA1_00596 ykoE; Putative HMP/thiamine permease protein YkoE K16925 ykoE; energy-coupling factor transport system permease protein D AURUGA1_00044 mntB_1; Manganese transport system membrane protein MntB K02075 ABC.ZM.P; zinc/manganese transport system permease protein D AURUGA1_00045 mntB_2; Manganese transport system membrane protein MntB K02075 ABC.ZM.P; zinc/manganese transport system permease protein D AURUGA1_01152 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D AURUGA1_01153 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D AURUGA1_00518 tagG_1; Teichoic acid translocation permease protein TagG K01992 ABC-2.P; ABC-2 type transport system permease protein D AURUGA1_01233 tagG_2; Teichoic acid translocation permease protein TagG K01992 ABC-2.P; ABC-2 type transport system permease protein D AURUGA1_00517 tagH_1; Teichoic acids export ATP-binding protein TagH K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AURUGA1_01232 tagH_2; Teichoic acids export ATP-binding protein TagH K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AURUGA1_00973 yurY; Vegetative protein 296 K09013 sufC; Fe-S cluster assembly ATP-binding protein D AURUGA1_00434 yeaN; Inner membrane transport protein YeaN K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D AURUGA1_00732 hsrA; putative transport protein HsrA K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D AURUGA1_00330 qacA_2; Antiseptic resistance protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D AURUGA1_01584 Vacuole effluxer Atg22 like protein K06902 UMF1; MFS transporter, UMF1 family D AURUGA1_01309 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D AURUGA1_01315 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D AURUGA1_01312 fruA_1; PTS system fructose-specific EIIABC component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D AURUGA1_01314 fruA_3; PTS system fructose-specific EIIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D AURUGA1_01087 aqpZ_1; Aquaporin Z K06188 aqpZ; aquaporin Z D AURUGA1_01253 kcsA; pH-gated potassium channel KcsA K10716 kch; voltage-gated potassium channel D AURUGA1_00893 nrgA_1; Ammonium transporter NrgA K03320 amt; ammonium transporter, Amt family D AURUGA1_00894 nrgA_2; Ammonium transporter NrgA K03320 amt; ammonium transporter, Amt family D AURUGA1_00616 ykuT; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel D AURUGA1_01514 camphor resistance protein CrcB K06199 crcB; fluoride exporter D AURUGA1_01515 crcB; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter D AURUGA1_00689 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D AURUGA1_01262 tlyC; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D AURUGA1_00772 corC_1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D AURUGA1_01263 corC_2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D AURUGA1_00720 puuP_1; Putrescine importer PuuP K14052 puuP; putrescine importer D AURUGA1_00555 yhdG_1; putative amino acid permease YhdG K16238 eat; ethanolamine permease D AURUGA1_00549 yjeH; Inner membrane protein YjeH K16263 yjeH; amino acid efflux transporter D AURUGA1_01122 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D AURUGA1_01131 ebrB; Multidrug resistance protein EbrB K03297 emrE; small multidrug resistance pump D AURUGA1_00705 EamA-like transporter family protein K03298 TC.DME; drug/metabolite transporter, DME family D AURUGA1_00210 EamA-like transporter family protein K05786 rarD; chloramphenicol-sensitive protein RarD D AURUGA1_00029 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AURUGA1_01447 chaA; Sodium/proton antiporter ChaA K07300 chaA; Ca2+:H+ antiporter D AURUGA1_00667 actP; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter D AURUGA1_00356 nhaA; Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D AURUGA1_01050 khtT; K(+)/H(+) antiporter subunit KhtT K07228 khtT; K+:H+ antiporter subunit KhtT D AURUGA1_01051 yhaU; K(+)/H(+) antiporter YhaU K26732 khtU; K+:H+ antiporter subunit KhtU D AURUGA1_01543 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein D AURUGA1_01544 ktrA; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein D AURUGA1_01120 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease D AURUGA1_00100 putative ion channel protein K03281 clcA; chloride channel protein, CIC family D AURUGA1_00164 bicA; Bicarbonate transporter BicA K03321 TC.SULP; sulfate permease, SulP family D AURUGA1_01384 mntH_2; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein D AURUGA1_01605 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D AURUGA1_00627 argO; Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO D AURUGA1_00957 AzlC protein K26605 azlC; branched chain amino acid efflux pump D AURUGA1_00956 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump D AURUGA1_00579 tqsA; AI-2 transport protein TqsA K20469 K20469; putative heme transporter D AURUGA1_01440 VIT family protein K22736 VIT; vacuolar iron transporter family protein D AURUGA1_01155 VIT family protein K22736 VIT; vacuolar iron transporter family protein D AURUGA1_01004 ftsW_2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D AURUGA1_00484 efeU; Ferrous iron permease EfeU K07243 FTR; high-affinity iron transporter D AURUGA1_01534 dsbD; Thiol:disulfide interchange protein DsbD K06196 ccdA; cytochrome c-type biogenesis protein D AURUGA1_01327 hypothetical protein K07156 copC; copper resistance protein C C 02044 Secretion system [BR:auw02044] D AURUGA1_00396 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AURUGA1_01340 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AURUGA1_01186 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AURUGA1_01339 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B D AURUGA1_01185 hypothetical protein K12510 tadB; tight adherence protein B D AURUGA1_01184 Bacterial type II secretion system protein F domain protein K12511 tadC; tight adherence protein C D AURUGA1_00997 YGGT family protein K02221 yggT; YggT family protein D AURUGA1_00759 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA D AURUGA1_00760 ComEC family competence protein K02238 comEC; competence protein ComEC D AURUGA1_01273 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AURUGA1_00880 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AURUGA1_01396 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AURUGA1_00879 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AURUGA1_00987 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AURUGA1_00185 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AURUGA1_01071 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AURUGA1_01072 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D AURUGA1_00881 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AURUGA1_01614 misCA; Membrane protein insertase MisCA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D AURUGA1_00798 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D AURUGA1_00495 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D AURUGA1_00799 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:auw02042] D AURUGA1_01262 tlyC; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D AURUGA1_00772 corC_1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D AURUGA1_01263 corC_2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D AURUGA1_00393 hemolysin-III related K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:auw02022] D AURUGA1_01471 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D AURUGA1_01472 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D AURUGA1_01277 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D AURUGA1_01278 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D AURUGA1_01388 tcrY_2; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AURUGA1_00299 tcrY_1; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D AURUGA1_01389 tcrX_2; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator D AURUGA1_00300 tcrX_1; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator D AURUGA1_01264 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D AURUGA1_00831 pdtaR; putative transcriptional regulatory protein pdtaR K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:auw02035] D AURUGA1_00396 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AURUGA1_01340 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AURUGA1_01186 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:auw04812] D AURUGA1_01000 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AURUGA1_00681 parA_1; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AURUGA1_01611 parA_3; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AURUGA1_00711 parA_2; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D AURUGA1_01610 spo0C; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:auw04147] D AURUGA1_00362 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AURUGA1_00990 gap2; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AURUGA1_00704 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AURUGA1_00989 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AURUGA1_00833 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AURUGA1_00013 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D AURUGA1_00297 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AURUGA1_01583 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D AURUGA1_009782 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AURUGA1_00221 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AURUGA1_00222 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AURUGA1_00162 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D AURUGA1_00769 hinT; HIT-like protein HinT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AURUGA1_00716 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D AURUGA1_01279 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D AURUGA1_00186 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AURUGA1_00546 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AURUGA1_00656 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AURUGA1_01375 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AURUGA1_01433 N(G),N(G)-dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18] D AURUGA1_00257 ddc_1; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D AURUGA1_00583 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D AURUGA1_00817 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D AURUGA1_00925 glnA_1; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00927 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00554 glnT; Glutamine synthetase 3 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01416 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_01421 glnA_3; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AURUGA1_00103 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AURUGA1_01092 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AURUGA1_01434 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AURUGA1_00918 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AURUGA1_01427 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D AURUGA1_00983 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AURUGA1_00988 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AURUGA1_00284 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:auw02048] D AURUGA1_00229 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AURUGA1_00348 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D AURUGA1_00347 vapB; Antitoxin VapB K18829 mvpT; antitoxin VapB D AURUGA1_01000 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AURUGA1_01089 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AURUGA1_00466 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D AURUGA1_00586 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:auw01504] D AURUGA1_01109 hypothetical protein K06979 mph; macrolide phosphotransferase D AURUGA1_00074 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:auw03100] D AURUGA1_00009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AURUGA1_00750 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AURUGA1_01565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AURUGA1_01234 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AURUGA1_00310 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AURUGA1_00605 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AURUGA1_00958 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AURUGA1_00112 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AURUGA1_00891 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AURUGA1_00344 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AURUGA1_01088 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AURUGA1_00113 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AURUGA1_01085 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AURUGA1_00892 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AURUGA1_00624 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AURUGA1_00602 tRNA-His K14226 tRNA-His; tRNA His D AURUGA1_00008 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AURUGA1_00790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AURUGA1_00026 tRNA-Ser K14228 tRNA-Leu; tRNA Leu D AURUGA1_00832 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AURUGA1_00367 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AURUGA1_01176 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AURUGA1_00274 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AURUGA1_01158 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AURUGA1_01449 tRNA-Met K14230 tRNA-Met; tRNA Met D AURUGA1_01139 tRNA-Met K14230 tRNA-Met; tRNA Met D AURUGA1_00952 tRNA-Met K14230 tRNA-Met; tRNA Met D AURUGA1_00111 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AURUGA1_00690 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AURUGA1_00625 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AURUGA1_00081 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AURUGA1_01356 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AURUGA1_00140 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AURUGA1_00079 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AURUGA1_01326 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AURUGA1_00292 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AURUGA1_01450 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AURUGA1_01397 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AURUGA1_01459 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AURUGA1_00937 tRNA-Val K14237 tRNA-Val; tRNA Val D AURUGA1_00890 tRNA-Val K14237 tRNA-Val; tRNA Val D AURUGA1_00661 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D AURUGA1_00663 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D AURUGA1_00664 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AURUGA1_01150 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D AURUGA1_01499 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D AURUGA1_00547 dkgB; 2,5-diketo-D-gluconic acid reductase B K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D AURUGA1_00129 gpr; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D AURUGA1_01301 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D AURUGA1_00258 qorA; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D AURUGA1_00607 mrsA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D AURUGA1_01067 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D AURUGA1_01328 efeN; putative deferrochelatase/peroxidase EfeN precursor K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19] D AURUGA1_01246 bcp; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AURUGA1_00938 Putative peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29] D AURUGA1_00272 yhhW_2; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D AURUGA1_00132 yhhW_1; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D AURUGA1_01476 fprA; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D AURUGA1_01538 Putative glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D AURUGA1_01475 arsC2; Arsenate-mycothiol transferase ArsC2 K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D AURUGA1_00801 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D AURUGA1_01149 yncA_1; N-acyltransferase YncA K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D AURUGA1_00836 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D AURUGA1_00261 apbE; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D AURUGA1_00926 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D AURUGA1_01462 pnbA; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D AURUGA1_00611 Thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AURUGA1_00508 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D AURUGA1_00339 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AURUGA1_00031 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D AURUGA1_00955 def_2; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D AURUGA1_00715 def_1; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D AURUGA1_00543 2-oxoglutaramate amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D AURUGA1_01164 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AURUGA1_00659 D-aspartate ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12] C 99981 Carbohydrate metabolism D AURUGA1_00443 Xylose isomerase-like TIM barrel K06605 iolH; myo-inositol catabolism protein IolH C 99982 Energy metabolism D AURUGA1_01408 subB; Ferredoxin-2 K05337 fer; ferredoxin D AURUGA1_01426 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D AURUGA1_00999 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D AURUGA1_01286 O-Antigen ligase K16567 exoQ; exopolysaccharide production protein ExoQ D AURUGA1_01287 O-Antigen ligase K16567 exoQ; exopolysaccharide production protein ExoQ C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D AURUGA1_00557 putative hydrolase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D AURUGA1_00295 cspA; Cold shock protein CspA K03704 cspA; cold shock protein D AURUGA1_00304 csp; Cold shock-like protein K03704 cspA; cold shock protein C 99974 Translation D AURUGA1_01138 Ribonuclease K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D AURUGA1_00626 tig; Trigger factor K03545 tig; trigger factor D AURUGA1_01151 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D AURUGA1_01533 ccs1; Cytochrome c biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D AURUGA1_00435 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D AURUGA1_01053 hypothetical protein K04096 smf; DNA processing protein D AURUGA1_00874 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase C 99979 Viral proteins C 99998 Others D AURUGA1_01550 moeZ; putative adenylyltransferase/sulfurtransferase MoeZ K03972 pspE; phage shock protein E B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D AURUGA1_01508 yhdG_3; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D AURUGA1_00067 dtpT; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family C 99978 Cell growth D AURUGA1_01613 R3H domain protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D AURUGA1_00483 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D AURUGA1_00770 ybeZ_2; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D AURUGA1_00395 ybeZ_1; PhoH-like protein K07175 phoH2; PhoH-like ATPase D AURUGA1_01461 putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins C 99994 Others D AURUGA1_01470 hypothetical protein K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D AURUGA1_00615 glbO; Group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin D AURUGA1_00641 ydfJ; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily D AURUGA1_01457 ydgH; Putative membrane protein YdgH K06994 K06994; putative drug exporter of the RND superfamily D AURUGA1_00976 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D AURUGA1_00975 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D AURUGA1_01316 yhjD; Inner membrane protein YhjD K07058 K07058; membrane protein D AURUGA1_00897 Fe-S metabolism associated domain protein K02426 sufE; cysteine desulfuration protein SufE D AURUGA1_00041 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D AURUGA1_00386 LemA family protein K03744 lemA; LemA protein D AURUGA1_01020 yabI; Inner membrane protein YabI K03975 dedA; membrane-associated protein D AURUGA1_01485 yghB_2; Inner membrane protein YghB K03975 dedA; membrane-associated protein D AURUGA1_01177 yqjA; Inner membrane protein YqjA K03975 dedA; membrane-associated protein D AURUGA1_01178 yghB_1; Inner membrane protein YghB K03975 dedA; membrane-associated protein D AURUGA1_00640 ABC-2 family transporter protein K01421 yhgE; putative membrane protein D AURUGA1_00058 Membrane protein of unknown function K08972 K08972; putative membrane protein D AURUGA1_00751 hypothetical protein K06193 phnA; protein PhnA C 99997 Function unknown D AURUGA1_01064 hypothetical protein K06929 K06929; uncharacterized protein D AURUGA1_01060 hypothetical protein K06960 K06960; uncharacterized protein D AURUGA1_00069 hypothetical protein K06975 K06975; uncharacterized protein D AURUGA1_00071 Pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein D AURUGA1_01361 Pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein D AURUGA1_00578 Alpha/beta hydrolase family protein K07018 K07018; uncharacterized protein D AURUGA1_01357 Glyoxalase-like domain protein K07032 K07032; uncharacterized protein D AURUGA1_01049 Epimerase family protein K07071 K07071; uncharacterized protein D AURUGA1_00094 hypothetical protein K07075 K07075; uncharacterized protein D AURUGA1_01446 hypothetical protein K07086 K07086; uncharacterized protein D AURUGA1_01517 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein D AURUGA1_01345 phosphodiesterase YaeI K07098 K07098; uncharacterized protein D AURUGA1_00458 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K07124 K07124; uncharacterized protein D AURUGA1_00011 ATP-dependent protease La (LON) domain protein K07157 K07157; uncharacterized protein D AURUGA1_00934 Putative zinc ribbon domain protein K07164 K07164; uncharacterized protein D AURUGA1_01615 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D AURUGA1_00364 hypothetical protein K09009 K09009; uncharacterized protein D AURUGA1_01103 hypothetical protein K09118 K09118; uncharacterized protein D AURUGA1_00558 hypothetical protein K09131 K09131; uncharacterized protein D AURUGA1_00947 hypothetical protein K09164 K09164; uncharacterized protein D AURUGA1_00228 Type III restriction enzyme, res subunit K09384 K09384; uncharacterized protein D AURUGA1_01554 hypothetical protein K09702 K09702; uncharacterized protein D AURUGA1_01187 hypothetical protein K09861 K09861; uncharacterized protein D AURUGA1_00138 hypothetical protein K09959 K09959; uncharacterized protein D AURUGA1_00628 hypothetical protein K09981 K09981; uncharacterized protein D AURUGA1_01399 hypothetical protein K05937 K05937; uncharacterized protein D AURUGA1_00533 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024