+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Apaloderma vittatum (bar-tailed trogon)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        104268414 RNMT; mRNA cap guanine-N7 methyltransferase	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        104272547 CDK7; cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        104275349 CMTR1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        104277465 CMTR2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        104269700 FAM103A1; RNMT-activating mini protein	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        104267585 NCBP1; nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        104272365 NCBP2; nuclear cap-binding protein subunit 2	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        104273393 NUDT21; LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 5	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        104269135 CPSF6; cleavage and polyadenylation specificity factor subunit 6	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        104272578 PCF11; pre-mRNA cleavage complex 2 protein Pcf11	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        104267592 CPSF2; cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        104267628 CPSF3; cleavage and polyadenylation specificity factor subunit 3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        104271046 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        104274900 CPSF4; cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        104269600 pre-mRNA 3'-end-processing factor FIP1-like	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        104273044 FIP1L1; pre-mRNA 3'-end-processing factor FIP1	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        104268002 WDR33; pre-mRNA 3' end processing protein WDR33 isoform X1	K15542 PFS2; polyadenylation factor subunit 2 
E        104268524 WDR82; WD repeat-containing protein 82	K14962 WDR82; COMPASS component SWD2 
E        104268723 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104278899 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104270980 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        104276990 CSTF1; cleavage stimulation factor subunit 1	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        104276388 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        104271462 CSTF3; cleavage stimulation factor subunit 3	K14408 CSTF3; cleavage stimulation factor subunit 3 
D      U7-dependent histone pre-mRNA processing factors
E        104269437 LOW QUALITY PROTEIN: small nuclear ribonucleoprotein-associated protein B'-like	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        104280241 SNRPD3; small nuclear ribonucleoprotein Sm D3	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        104272007 SNRPE; small nuclear ribonucleoprotein E	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        104276788 SNRPG; small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        104273519 LSM11; U7 snRNA-associated Sm-like protein LSm11	K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 
E        104267592 CPSF2; cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        104267628 CPSF3; cleavage and polyadenylation specificity factor subunit 3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        104276388 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        104268349 SLBP; histone RNA hairpin-binding protein	K18710 SLBP; histone RNA hairpin-binding protein 
E        104269715 histone RNA hairpin-binding protein-like	K18710 SLBP; histone RNA hairpin-binding protein 
E        104268390 CASP8AP2; CASP8-associated protein 2	K25593 CASP8AP2; CASP8-associated protein 2 
D      DRB sensitivity inducing factor (DSIF) complex
E        104271654 SUPT4H1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
D      N6-methyltransferase complex
E        104272468 METTL14; N6-adenosine-methyltransferase subunit METTL14	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        104274223 METTL4; methyltransferase-like protein 4	K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] 
E        104267063 METTL16; methyltransferase-like protein 16	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        104277768 WTAP; pre-mRNA-splicing regulator WTAP isoform X1	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        104267120 KIAA1429; protein virilizer homolog	K22910 VIRMA; protein virilizer 
E        104274912 RBM15B; putative RNA-binding protein 15B	K13190 RBM15; RNA-binding protein 15 
E        104278121 ZC3H13; zinc finger CCCH domain-containing protein 13 isoform X1	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        104271948 CBLL1; E3 ubiquitin-protein ligase Hakai	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        104277484 PAPOLG; poly(A) polymerase gamma	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        104267725 poly(A) polymerase alpha	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        104268432 PAPD4; poly(A) RNA polymerase GLD2	K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] 
D      Negative regulators of mRNA 3' end processing
E        104279708 BARD1; LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        104277235 RBM26; RNA-binding protein 26	K13192 RBM26; RNA-binding protein 26 
E        104270522 FTO; alpha-ketoglutarate-dependent dioxygenase FTO	K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        104274750 ALKBH5; RNA demethylase ALKBH5	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        104272348 TARDBP; TAR DNA-binding protein 43	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      104273132 DHX40; probable ATP-dependent RNA helicase DHX40	K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6] 
D      104276457 KIN; DNA/RNA-binding protein KIN17	K13102 KIN; DNA/RNA-binding protein KIN17 
D      104271917 METTL8; methyltransferase-like protein 8	K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-] 
D      104271830 METTL22; methyltransferase-like protein 22	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      104269614 protein FAM46A	K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-] 
D      104276989 FAM46C; protein FAM46C	K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] 
D      104271800 protein FAM46C-like	K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19] 
D      104276869 ZC3H14; zinc finger CCCH domain-containing protein 14	K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        104274920 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        104270083 EIF4A3; eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        104267960 CCDC174; coiled-coil domain-containing protein 174	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        104270163 SAP18; histone deacetylase complex subunit SAP18	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        104267496 PNN; pinin	K13114 PNN; pinin 
E        104269028 RNPS1; RNA-binding protein with serine-rich domain 1	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        104280828 SRRM1; serine/arginine repetitive matrix protein 1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        104267581 THO complex subunit 1	K12878 THOC1; THO complex subunit 1 
E        104280217 THOC2; LOW QUALITY PROTEIN: THO complex subunit 2	K12879 THOC2; THO complex subunit 2 
E        104278058 THOC3; THO complex subunit 3	K12880 THOC3; THO complex subunit 3 
E        104276452 THOC5; THO complex subunit 5 homolog	K13174 THOC5; THO complex subunit 5 
E        104268588 THOC7; THO complex subunit 7 homolog isoform X1	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        104268110 PCID2; PCI domain-containing protein 2	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        104269286 ENY2; transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        104274500 centrin-2	K10840 CETN2; centrin-2 
E        104269015 CETN3; centrin-3	K16466 CETN3; centrin-3 
E        104267206 MCM3AP; germinal-center associated nuclear protein	K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48] 
D      Nuclear pore complex
E        104267491 TPR; nucleoprotein TPR	K09291 TPR; nucleoprotein TPR 
E        104275994 RAE1; mRNA export factor	K14298 RAE1; mRNA export factor 
E        104278795 SEC13; protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        104272343 NUP37; nucleoporin Nup37	K14302 NUP37; nuclear pore complex protein Nup37 
E        104280877 NUP85; nuclear pore complex protein Nup85	K14304 NUP85; nuclear pore complex protein Nup85 
E        104268204 NUP43; nucleoporin Nup43	K14305 NUP43; nuclear pore complex protein Nup43 
E        104268203 NUP50; nuclear pore complex protein Nup50	K14295 NUP50; nuclear pore complex protein Nup50 
E        104270846 NUP54; LOW QUALITY PROTEIN: nucleoporin p54	K14308 NUP54; nuclear pore complex protein Nup54 
E        104278379 LOW QUALITY PROTEIN: nuclear pore glycoprotein p62-like	K14306 NUP62; nuclear pore complex protein Nup62 
E        104273170 NUP93; nuclear pore complex protein Nup93	K14309 NUP93; nuclear pore complex protein Nup93 
E        104270830 NUP98; nuclear pore complex protein Nup98-Nup96	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        104277846 NUP107; LOW QUALITY PROTEIN: nuclear pore complex protein Nup107	K14301 NUP107; nuclear pore complex protein Nup107 
E        104280493 NUP133; nuclear pore complex protein Nup133	K14300 NUP133; nuclear pore complex protein Nup133 
E        104281086 NUP188; nucleoporin NUP188 homolog	K14311 NUP188; nuclear pore complex protein Nup188 
E        104280342 NUP153; LOW QUALITY PROTEIN: nuclear pore complex protein Nup153	K14296 NUP153; nuclear pore complex protein Nup153 
E        104270344 LOW QUALITY PROTEIN: nuclear pore complex protein Nup160-like	K14303 NUP160; nuclear pore complex protein Nup160 
E        104268802 NUP35; nucleoporin NUP53	K14313 NUP35; nuclear pore complex protein Nup53 
E        104272582 NUP205; LOW QUALITY PROTEIN: nuclear pore complex protein Nup205	K14310 NUP205; nuclear pore complex protein Nup205 
E        104278823 NUP210; nuclear pore membrane glycoprotein 210	K14314 NUP210; nuclear pore complex protein Nup210 
E        104278041 NUP214; nuclear pore complex protein Nup214	K14317 NUP214; nuclear pore complex protein Nup214 
E        104274632 NUPL1; LOW QUALITY PROTEIN: nucleoporin p58/p45	K14307 NUPL1; nucleoporin p58/p45 
E        104281078 NUPL2; nucleoporin-like protein 2	K14321 NUPL2; nucleoporin-like protein 2 
E        104267857 NDC1; nucleoporin NDC1	K14315 NDC1; nucleoporin NDC1 
E        104268242 SEH1L; nucleoporin SEH1	K14299 SEH1; nucleoporin SEH1 
E        104269544 SENP2; sentrin-specific protease 2	K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68] 
E        104269015 CETN3; centrin-3	K16466 CETN3; centrin-3 
E        104267831 NTF2-related export protein 2	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        104269346 RAN; GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        104271323 ANP32A; acidic leucine-rich nuclear phosphoprotein 32 family member A	K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D 
E        104278045 acidic leucine-rich nuclear phosphoprotein 32 family member B isoform X1	K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B 
E        104279264 ELAV-like protein 1	K13088 ELAVL1; ELAV-like protein 1 
E        104278431 ELAVL4; ELAV-like protein 4 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        104280837 FAF2; FAS-associated factor 2	K18726 FAF2; FAS-associated factor 2 
E        104280516 VCP; transitional endoplasmic reticulum ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        104281495 VCPKMT; protein-lysine methyltransferase METTL21D	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        104267677 XPO1; exportin-1	K14290 XPO1; exportin-1 
E        104277168 XPO7; exportin-7	K18460 XPO7; exportin-7 
E        104267847 ran-binding protein 17-like	K24115 RANBP17; Ran-binding protein 17 
E        104279835 RANGAP1; ran GTPase-activating protein 1	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        104276023 TATA-binding protein-associated factor 2N-like	K14651 TAF15; transcription initiation factor TFIID subunit 15 
D      eIF4F and regulatory proteins
E        104271959 eukaryotic translation initiation factor 4E-like	K03259 EIF4E; translation initiation factor 4E 
E        104268885 eukaryotic translation initiation factor 4E	K03259 EIF4E; translation initiation factor 4E 
E        104276588 EIF4E2; eukaryotic translation initiation factor 4E type 2	K03259 EIF4E; translation initiation factor 4E 
E        104268217 EIF4A2; eukaryotic initiation factor 4A-II	K03257 EIF4A; translation initiation factor 4A 
E        104274916 EIF4G2; eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        104272484 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 3-like	K03260 EIF4G; translation initiation factor 4G 
E        104276389 EIF4G1; eukaryotic translation initiation factor 4 gamma 1	K03260 EIF4G; translation initiation factor 4G 
E        104279771 EIF4H; eukaryotic translation initiation factor 4H	K24086 EIF4H; translation initiation factor 4H 
E        104278380 EIF4EBP1; eukaryotic translation initiation factor 4E-binding protein 1	K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1 
E        104278227 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        104267692 protein angel homolog 1-like	K18729 ANGEL; protein angel 
E        104268674 ANGEL2; protein angel homolog 2 isoform X1	K18729 ANGEL; protein angel 
E        104280022 FMR1; fragile X mental retardation protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        104273895 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        104271776 cytoplasmic FMR1-interacting protein 1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        104279924 CYFIP2; cytoplasmic FMR1-interacting protein 2 isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        104281263 GEMIN5; LOW QUALITY PROTEIN: gem-associated protein 5	K13133 GEMIN5; gem associated protein 5 
E        104280708 TACC3; transforming acidic coiled-coil-containing protein 3	K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
E        104270356 CPEB1; cytoplasmic polyadenylation element-binding protein 1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104269453 CPEB4; cytoplasmic polyadenylation element-binding protein 4	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104280849 cytoplasmic polyadenylation element-binding protein 3-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104268808 DDX3X; ATP-dependent RNA helicase DDX3X	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        104278701 PERQ amino acid-rich with GYF domain-containing protein 2-like	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        104270553 PABPC1; polyadenylate-binding protein 1	K13126 PABPC; polyadenylate-binding protein 
E        104271779 LOW QUALITY PROTEIN: embryonic polyadenylate-binding protein-like	K13126 PABPC; polyadenylate-binding protein 
E        104275437 PABPC4; polyadenylate-binding protein 4	K13126 PABPC; polyadenylate-binding protein 
E        104269304 PAIP1; polyadenylate-binding protein-interacting protein 1	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        104278462 PAIP2; polyadenylate-binding protein-interacting protein 2	K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
E        104272269 DEAF1; deformed epidermal autoregulatory factor 1 homolog	K23041 DEAF1; deformed epidermal autoregulatory factor 1 
E        104268680 MCTS1; malignant T-cell-amplified sequence 1	K07575 MCTS; malignant T-cell-amplified sequence 
E        104271034 DENR; density-regulated protein	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
E        104269911 APOBEC1; C->U-editing enzyme APOBEC-1	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        104279370 A1CF; APOBEC1 complementation factor isoform X1	K24978 A1CF; APOBEC1 complementation factor 
D      Other transport factors
E        104277749 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        104272617 DAZAP1; DAZ-associated protein 1	K14411 MSI; RNA-binding protein Musashi 
E        104271050 uncharacterized protein LOC104271050	K14416 HBS1; elongation factor 1 alpha-like protein 
E        104280052 HBS1L; HBS1-like protein	K14416 HBS1; elongation factor 1 alpha-like protein 
E        104271938 PELO; protein pelota homolog	K06965 PELO; protein pelota 
E        104268441 PABPN1L; embryonic polyadenylate-binding protein 2	K14396 PABPN1; polyadenylate-binding protein 2 
E        104273642 ATP-dependent RNA helicase DDX19B	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        104267759 ATP-dependent RNA helicase DDX25-like	K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7] 
E        104280254 RCC1; regulator of chromosome condensation	K11493 RCC1; regulator of chromosome condensation 
E        104269737 LARP6; la-related protein 6	K18733 LARP6; la-related protein 6 
E        104276800 POLDIP3; LOW QUALITY PROTEIN: polymerase delta-interacting protein 3	K22414 POLDIP3; polymerase delta-interacting protein 3 
E        104280469 ZC3H11A; zinc finger CCCH domain-containing protein 11A	K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 
E        104273552 PATL2; protein PAT1 homolog 2	K24823 PATL2; protein PAT1 homolog 2 
C    Surveillance factors
D      Surveillance complex
E        104273761 ETF1; eukaryotic peptide chain release factor subunit 1	K03265 ETF1; peptide chain release factor subunit 1 
E        104268023 eukaryotic peptide chain release factor GTP-binding subunit ERF3A	K03267 ERF3; peptide chain release factor subunit 3 
E        104271273 UPF1; regulator of nonsense transcripts 1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        104269419 UPF2; regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
E        104280298 UPF3B; regulator of nonsense transcripts 3B	K14328 UPF3; regulator of nonsense transcripts 3 
E        104280961 UPF3A; regulator of nonsense transcripts 3A	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        104268822 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        104269155 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        104270995 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        104268744 PPP2R2A; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        104280723 PPP2R2C; protein phosphatase 2, regulatory subunit B, gamma	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        104268416 PPP2R3B; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        104272774 PPP2R3C; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        104278534 PPP2R3A; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        104271506 PPP2R5D; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        104275373 PPP2R5C; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        104280084 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        104278487 PPP2R5A; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        104276297 SMG1; serine/threonine-protein kinase SMG1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        104275658 SMG5; protein SMG5	K11125 SMG5; protein SMG5 
E        104272938 telomerase-binding protein EST1A-like	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        104280661 SMG7; protein SMG7 isoform X1	K14409 SMG7; protein SMG7 
E        104275575 SMG8; protein SMG8	K18734 SMG8; protein SMG8 
E        104278701 PERQ amino acid-rich with GYF domain-containing protein 2-like	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        104275042 SECISBP2; selenocysteine insertion sequence-binding protein 2	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        104279617 SECISBP2L; selenocysteine insertion sequence-binding protein 2-like	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        104281392 GTPBP1; GTP-binding protein 1	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        104270349 pumilio domain-containing protein KIAA0020 homolog	K14844 PUF6; pumilio homology domain family member 6 
E        104270090 MYO5A; unconventional myosin-Va	K10357 MYO5; myosin V 
E        104269549 MYO5C; unconventional myosin-Vc	K10357 MYO5; myosin V 
E        104280038 LOW QUALITY PROTEIN: unconventional myosin-Vb-like	K10357 MYO5; myosin V 
E        104280643 BICD1; LOW QUALITY PROTEIN: protein bicaudal D homolog 1	K18739 BICD; protein bicaudal D 
E        104281101 BICD2; protein bicaudal D homolog 2	K18739 BICD; protein bicaudal D 
D      Factors that have mRNA localization signals
E        104268866 actin, cytoplasmic 1 isoform X1	K05692 ACTB_G1; actin beta/gamma 1 
E        104269571 actin, cytoplasmic type 5 isoform X1	K05692 ACTB_G1; actin beta/gamma 1 
E        104270201 MBP; myelin basic protein isoform X1	K17269 MBP; myelin basic protein 
E        104269091 VIM; vimentin	K07606 VIM; vimentin 
E        104273572 GDF3; growth/differentiation factor 3	K05495 GDF1; growth differentiation factor 1 
E        104274412 T-box-containing protein TBX6L	K10180 TBX6; T-box protein 6 
D      Trans-acting binding proteins
E        104270933 FUBP1; far upstream element-binding protein 1	K13210 FUBP; far upstream element-binding protein 
E        104276456 FUBP3; far upstream element-binding protein 3	K13210 FUBP; far upstream element-binding protein 
E        104270469 EEF1A1; elongation factor 1-alpha 1	K03231 EEF1A; elongation factor 1-alpha 
E        104278411 elongation factor 1-alpha 2	K03231 EEF1A; elongation factor 1-alpha 
E        104269433 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1	K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1 
E        104281240 AGFG1; arf-GAP domain and FG repeat-containing protein 1	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
E        104270434 STAU2; double-stranded RNA-binding protein Staufen homolog 2	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        104274720 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        104272920 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3	K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 
E        104277399 PTBP1; polypyrimidine tract-binding protein 1	K13218 PTBP1; polypyrimidine tract-binding protein 1 
E        104270356 CPEB1; cytoplasmic polyadenylation element-binding protein 1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104269453 CPEB4; cytoplasmic polyadenylation element-binding protein 4	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104280849 cytoplasmic polyadenylation element-binding protein 3-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        104280022 FMR1; fragile X mental retardation protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        104273895 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        104271776 cytoplasmic FMR1-interacting protein 1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        104279924 CYFIP2; cytoplasmic FMR1-interacting protein 2 isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        104268599 poly(rC)-binding protein 3-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        104277216 PCBP3; poly(rC)-binding protein 3	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        104274231 poly(rC)-binding protein 4-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        104276919 CAPRIN1; caprin-1	K18743 CAPRIN1; caprin-1 
E        104279550 CAPRIN2; caprin-2	K18744 CAPRIN2; caprin-2 
E        104278327 YBX1; LOW QUALITY PROTEIN: nuclease-sensitive element-binding protein 1	K09276 YBX1; Y-box-binding protein 1 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        104277299 XRN1; 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        104270745 protein argonaute-3	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        104270622 AGO2; protein argonaute-2	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        104272799 AGO4; protein argonaute-4	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        104271959 eukaryotic translation initiation factor 4E-like	K03259 EIF4E; translation initiation factor 4E 
E        104268885 eukaryotic translation initiation factor 4E	K03259 EIF4E; translation initiation factor 4E 
E        104276588 EIF4E2; eukaryotic translation initiation factor 4E type 2	K03259 EIF4E; translation initiation factor 4E 
E        104271273 UPF1; regulator of nonsense transcripts 1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        104268808 DDX3X; ATP-dependent RNA helicase DDX3X	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        104275238 DDX6; probable ATP-dependent RNA helicase DDX6	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        104280710 MEX3A; LOW QUALITY PROTEIN: RNA-binding protein MEX3A	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        104268672 LSM14A; protein LSM14 homolog A	K18749 LSM14; protein LSM14 
E        104275481 LSM14B; protein LSM14 homolog B	K18749 LSM14; protein LSM14 
E        104278327 YBX1; LOW QUALITY PROTEIN: nuclease-sensitive element-binding protein 1	K09276 YBX1; Y-box-binding protein 1 
E        104269911 APOBEC1; C->U-editing enzyme APOBEC-1	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        104274531 MOV10; LOW QUALITY PROTEIN: putative helicase MOV-10	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        104271985 PNRC2; proline-rich nuclear receptor coactivator 2	K18751 PNRC2; proline-rich nuclear receptor coactivator 2 
E        104281410 LOW QUALITY PROTEIN: transportin-1-like	K18752 TNPO1; transportin-1 
E        104276297 SMG1; serine/threonine-protein kinase SMG1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        104275658 SMG5; protein SMG5	K11125 SMG5; protein SMG5 
E        104272938 telomerase-binding protein EST1A-like	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        104280661 SMG7; protein SMG7 isoform X1	K14409 SMG7; protein SMG7 
E        104278014 LOW QUALITY PROTEIN: protein lin-28 homolog A-like	K18754 LIN28; protein lin-28 
E        104273412 HTT; huntingtin	K04533 HD; huntingtin 
E        104275408 IPO8; LOW QUALITY PROTEIN: importin-8	K18755 IPO8; importin-8 
E        104280683 BICC1; protein bicaudal C homolog 1	K18756 BICC1; protein bicaudal C 
E        104277749 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        104272387 cAMP-dependent protein kinase catalytic subunit beta	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        104271379 LARP1; LOW QUALITY PROTEIN: la-related protein 1	K18757 LARP1; la-related protein 1 
E        104272165 LARP1B; LOW QUALITY PROTEIN: la-related protein 1B	K18757 LARP1; la-related protein 1 
E        104280538 ATXN2; ataxin-2	K23625 ATXN2_2L; ataxin 2/2L 
D      P-body specific factors
E        104271128 DCP2; m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        104281411 DCP1A; mRNA-decapping enzyme 1A	K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] 
E        104278458 DCP1B; LOW QUALITY PROTEIN: mRNA-decapping enzyme 1B	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        104269455 LSM1; LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        104274145 LSM3; U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        104267407 LSM4; U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        104267702 LSM5; U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        104273345 LSM6; U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        104278714 LSM7; U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        104269458 LSM8; LSM8 homolog, U6 small nuclear RNA associated	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        104276119 kinesin light chain 1-like	K10407 KLC; kinesin light chain 
E        104277114 KLC1; kinesin light chain 1	K10407 KLC; kinesin light chain 
E        104270090 MYO5A; unconventional myosin-Va	K10357 MYO5; myosin V 
E        104269549 MYO5C; unconventional myosin-Vc	K10357 MYO5; myosin V 
E        104280038 LOW QUALITY PROTEIN: unconventional myosin-Vb-like	K10357 MYO5; myosin V 
E        104270863 TUBAL3; LOW QUALITY PROTEIN: tubulin alpha chain-like 3	K07374 TUBA; tubulin alpha 
E        104269389 tubulin alpha-3 chain	K07374 TUBA; tubulin alpha 
E        104271768 tubulin alpha-8 chain	K07374 TUBA; tubulin alpha 
E        104268865 tubulin alpha-8 chain	K07374 TUBA; tubulin alpha 
E        104270356 CPEB1; cytoplasmic polyadenylation element-binding protein 1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104269453 CPEB4; cytoplasmic polyadenylation element-binding protein 4	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104280849 cytoplasmic polyadenylation element-binding protein 3-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104281263 GEMIN5; LOW QUALITY PROTEIN: gem-associated protein 5	K13133 GEMIN5; gem associated protein 5 
E        104280708 TACC3; transforming acidic coiled-coil-containing protein 3	K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
E        104278843 TNRC6A; trinucleotide repeat-containing gene 6A protein	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        104275595 LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6C protein-like	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        104280775 TNRC6B; trinucleotide repeat-containing gene 6B protein isoform X1	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        104280361 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        104277865 CNOT2; CCR4-NOT transcription complex subunit 2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        104268064 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        104267362 CNOT6L; CCR4-NOT transcription complex subunit 6-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        104268243 CNOT6; CCR4-NOT transcription complex subunit 6	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        104275876 CNOT7; CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        104269116 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        104279643 uncharacterized protein KIAA0355 homolog	K26671 GARRE1; granule associated Rac and RHOG effector protein 1 
E        104276968 DIS3L2; DIS3-like exonuclease 2	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        104273370 LOW QUALITY PROTEIN: DIS3-like exonuclease 2	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        104280340 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit PAN3	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        104270330 BTG2; protein BTG2	K14443 TOB; protein Tob/BTG 
E        104270979 TOB1; protein Tob1	K14443 TOB; protein Tob/BTG 
E        104279854 BTG1; protein BTG1	K14443 TOB; protein Tob/BTG 
E        104278464 BTG4; protein BTG4	K14443 TOB; protein Tob/BTG 
E        104278227 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        104276421 EDC3; enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        104273402 EDC4; enhancer of mRNA-decapping protein 4	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        104269419 UPF2; regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
E        104280298 UPF3B; regulator of nonsense transcripts 3B	K14328 UPF3; regulator of nonsense transcripts 3 
E        104280961 UPF3A; regulator of nonsense transcripts 3A	K14328 UPF3; regulator of nonsense transcripts 3 
E        104271619 TRIM71; E3 ubiquitin-protein ligase TRIM71	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        104277283 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase	K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1] 
E        104270649 ZAR1L; ZAR1-like protein	K18762 ZAR1; zygote arrest protein 1 
E        104269520 YTHDF3; YTH domain-containing family protein 3	K20102 YTHDF; YTH domain-containing family protein 
E        104276346 YTHDF1; YTH domain-containing family protein 1	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        104281381 TIAL1; nucleolysin TIAR	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        104274221 TIA1; nucleolysin TIA-1 isoform p40	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        104270553 PABPC1; polyadenylate-binding protein 1	K13126 PABPC; polyadenylate-binding protein 
E        104271779 LOW QUALITY PROTEIN: embryonic polyadenylate-binding protein-like	K13126 PABPC; polyadenylate-binding protein 
E        104275437 PABPC4; polyadenylate-binding protein 4	K13126 PABPC; polyadenylate-binding protein 
E        104270434 STAU2; double-stranded RNA-binding protein Staufen homolog 2	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        104274720 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        104280022 FMR1; fragile X mental retardation protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        104273895 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        104279264 ELAV-like protein 1	K13088 ELAVL1; ELAV-like protein 1 
E        104268353 G3BP1; ras GTPase-activating protein-binding protein 1 isoform X1	K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3] 
E        104268053 G3BP2; ras GTPase-activating protein-binding protein 2 isoform X1	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        104279610 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 2A-like	K15026 EIF2A; translation initiation factor 2A 
E        104268260 EIF3B; eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        104268217 EIF4A2; eukaryotic initiation factor 4A-II	K03257 EIF4A; translation initiation factor 4A 
E        104270083 EIF4A3; eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        104274916 EIF4G2; eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        104272484 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 3-like	K03260 EIF4G; translation initiation factor 4G 
E        104276389 EIF4G1; eukaryotic translation initiation factor 4 gamma 1	K03260 EIF4G; translation initiation factor 4G 
E        104275098 RPS6KA1; ribosomal protein S6 kinase alpha-1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        104272029 ribosomal protein S6 kinase alpha-2	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        104280064 RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        104278110 ribosomal protein S6 kinase alpha-6	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        104271225 TRAF2; TNF receptor-associated factor 2	K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27] 
E        104275038 tudor domain-containing protein 3-like	K18404 TDRD3; tudor domain-containing protein 3 
E        104268246 LARP4; LOW QUALITY PROTEIN: la-related protein 4	K18763 LARP4; la-related protein 4 
E        104280419 LARP4B; la-related protein 4B	K18763 LARP4; la-related protein 4 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        104281411 DCP1A; mRNA-decapping enzyme 1A	K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] 
E        104278458 DCP1B; LOW QUALITY PROTEIN: mRNA-decapping enzyme 1B	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        104271128 DCP2; m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        104275238 DDX6; probable ATP-dependent RNA helicase DDX6	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        104276421 EDC3; enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        104273402 EDC4; enhancer of mRNA-decapping protein 4	K12616 EDC4; enhancer of mRNA-decapping protein 4 
D      Lsm complex
E        104269455 LSM1; LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        104274145 LSM3; U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        104267407 LSM4; U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        104267702 LSM5; U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        104273345 LSM6; U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        104278714 LSM7; U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        104269458 LSM8; LSM8 homolog, U6 small nuclear RNA associated	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        104277299 XRN1; 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        104271973 XRN2; 5'-3' exoribonuclease 2	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
D      Other 5'-3' decay factors
E        104273879 DCPS; m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        104279111 HELZ; probable helicase with zinc finger domain	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    3'-5' decay
D      Core exosome factors
E        104278377 EXOSC1; exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
E        104268724 EXOSC2; exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        104267828 EXOSC7; exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
E        104273076 EXOSC8; exosome complex component RRP43	K12586 RRP43; exosome complex component RRP43 
E        104267398 exosome complex component RRP45-like	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        104273624 DIS3; exosome complex exonuclease RRP44	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        104269816 DIS3L; DIS3-like exonuclease 1	K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-] 
E        104267229 EXOSC10; exosome component 10	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        104267391 C1D; nuclear nucleic acid-binding protein C1D	K12592 C1D; exosome complex protein LRP1 
E        104271567 MPHOSPH6; M-phase phosphoprotein 6	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
E        104272158 DDX60; probable ATP-dependent RNA helicase DDX60	K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] 
D      TRAMP complex
E        104277045 PAPD7; non-canonical poly(A) RNA polymerase PAPD7 isoform X1	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        104274454 PAPD5; non-canonical poly(A) RNA polymerase PAPD5	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        104276629 ZCCHC7; zinc finger CCHC domain-containing protein 7	K12597 AIR1_2; protein AIR1/2 
E        104279191 SKIV2L2; superkiller viralicidic activity 2-like 2	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        104272793 TTC37; tetratricopeptide repeat protein 37	K12600 SKI3; superkiller protein 3 
E        104267705 WDR61; WD repeat-containing protein 61	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        104267362 CNOT6L; CCR4-NOT transcription complex subunit 6-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        104268243 CNOT6; CCR4-NOT transcription complex subunit 6	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        104280361 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        104277865 CNOT2; CCR4-NOT transcription complex subunit 2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        104268064 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        104275876 CNOT7; CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        104269116 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        104271732 RQCD1; cell differentiation protein RCD1 homolog	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        104271621 CNOT10; CCR4-NOT transcription complex subunit 10	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        104280340 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit PAN3	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
D      Other 3'-5' decay factors
E        104270706 PNLDC1; poly(A)-specific ribonuclease PARN-like domain-containing protein 1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        104267339 PARN; poly(A)-specific ribonuclease PARN	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        104278604 DHX36; ATP-dependent RNA helicase DHX36	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        104270330 BTG2; protein BTG2	K14443 TOB; protein Tob/BTG 
E        104270979 TOB1; protein Tob1	K14443 TOB; protein Tob/BTG 
E        104279854 BTG1; protein BTG1	K14443 TOB; protein Tob/BTG 
E        104278464 BTG4; protein BTG4	K14443 TOB; protein Tob/BTG 
E        104279765 CCRN4L; nocturnin	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        104268201 ERI1; 3'-5' exoribonuclease 1	K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] 
E        104268767 ERI2; ERI1 exoribonuclease 2	K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] 
E        104273879 DCPS; m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        104267890 PDE12; 2',5'-phosphodiesterase 12	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        104279044 IREB2; iron-responsive element-binding protein 2	K22416 IREB2; iron-responsive element-binding protein 2 
E        104279111 HELZ; probable helicase with zinc finger domain	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
E        104277777 HELZ2; LOW QUALITY PROTEIN: helicase with zinc finger domain 2	K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6] 
E        104276995 NRDE2; protein NRDE2 homolog	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        104274598 SAMD4A; protein Smaug homolog 1	K27396 SMG; protein Smaug 
E        104271850 FOCAD; focadhesin	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
E        104270143 ZC3H12C; probable ribonuclease ZC3H12C	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        104275145 ribonuclease ZC3H12A-like	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        104274371 ZC3H12B; probable ribonuclease ZC3H12B	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        104269175 probable ribonuclease ZC3H12D	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        104273343 DROSHA; ribonuclease 3	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        104276130 REXO2; oligoribonuclease, mitochondrial	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
D      Other RNA degradosome components
E        104268664 ENO1; alpha-enolase isoform X1	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        104271867 gamma-enolase isoform X1	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        104280278 PNPT1; LOW QUALITY PROTEIN: polyribonucleotide nucleotidyltransferase 1, mitochondrial	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        104279576 PFKL; LOW QUALITY PROTEIN: ATP-dependent 6-phosphofructokinase, liver type	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        104272998 PFKP; ATP-dependent 6-phosphofructokinase, platelet type isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        104280151 HSPA9; stress-70 protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        104268412 HSPD1; 60 kDa heat shock protein, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        104268724 EXOSC2; exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        104278377 EXOSC1; exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        104267828 EXOSC7; exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
D      Others
!
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#Last updated: April 25, 2024