+E Transcription factors KO #

  Transcription Factors - Brucella abortus BDW

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D DK48_2119 helix-turn-helix domain protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D DK48_1714 methylated-DNA-[]-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D DK48_2352 methylated-DNA-[]-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D DK48_2371 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DK48_2121 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D DK48_2182 bacterial regulatory helix-turn-helix , lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D DK48_2992 bacterial regulatory helix-turn-helix , lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D DK48_2263 lysR substrate binding domain protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein C DeoR family D DK48_1914 deoR-like helix-turn-helix domain protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family D DK48_1907 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DK48_2949 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DK48_1541 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DK48_2913 bacterial regulatory s, lacI family protein K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor C GntR family D DK48_1011 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D DK48_2392 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D DK48_3107 UTRA domain protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D DK48_2378 UTRA domain protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D DK48_2711 UTRA domain protein K03710 K03710; GntR family transcriptional regulator D DK48_2522 pdhR; pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex C TetR/AcrR family D DK48_1537 betI; transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D DK48_1785 bepR; HTH-type transcriptional repressor BepR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D DK48_1795 bacterial regulatory s, tetR family protein K09017 rutR; TetR/AcrR family transcriptional regulator D DK48_3061 bacterial regulatory s, tetR family protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity C Lrp/AsnC family D DK48_2195 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DK48_578 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DK48_1239 asnC family protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D DK48_476 asnC family protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D DK48_2239 asnC family protein K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon C LuxR family D DK48_2576 vjbR; HTH-type quorum sensing-dependent transcriptional regulator vjbR K21697 vjbR; LuxR family transcriptional regulator, quorum-sensing system regulator VjbR C MarR family D DK48_373 marR family protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D DK48_2227 marR family protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D DK48_3070 iclR helix-turn-helix domain protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D DK48_2349 ohrR; transcriptional regulator OhrR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D DK48_1893 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C Fur family D DK48_496 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D DK48_2767 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D DK48_14 ferric uptake regulator family protein K09826 irr; Fur family transcriptional regulator, iron response regulator C IclR family D DK48_2118 beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D DK48_509 bacterial transcriptional regulator family protein K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor C CRP/FNR family D DK48_1442 aadR; transcriptional activatory protein AadR K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D DK48_2948 cyclic nucleotide-binding domain protein K13642 ftrB; CRP/FNR family transcriptional regulator, transcriptional activator FtrB D DK48_2929 cyclic nucleotide-binding domain protein K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator D DK48_2912 cyclic nucleotide-binding domain protein K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator C Rrf2 family D DK48_3150 Rrf2 family protein K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator C ArsR family C XRE family D DK48_932 helix-turn-helix family protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D DK48_540 hypothetical protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator C PadR family C Other families D DK48_1286 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] B Ribbon-helix-helix C CopG family D DK48_2271 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator C Other families D DK48_2194 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D DK48_2922 4Fe-4S binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D DK48_1978 frmR; transcriptional repressor frmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D DK48_161 bolA-like family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D DK48_2686 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DK48_129 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DK48_397 carD-like/TRCF domain protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D DK48_1940 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D DK48_1901 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D DK48_3202 hypothetical protein K06140 rnk; regulator of nucleoside diphosphate kinase D DK48_1614 hypothetical protein K07735 algH; putative transcriptional regulator D DK48_1078 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D DK48_1335 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D DK48_1236 sel1 repeat family protein K25885 exoR; exopolysaccharide production negative regulator ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0