+E Transcription factors KO #

  Transcription Factors - Bacillus sp. YP1

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D QF06_20005 AraC family transcriptional regulator K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon D QF06_01475 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D QF06_20110 AraC family transcriptional regulator K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] C LysR family D QF06_08310 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D QF06_03655 LysR family transcriptional regulator K19242 citR; LysR family transcriptional regulator, repressor for citA D QF06_00765 LysR family transcriptional regulator K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD D QF06_17265 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D QF06_08290 transcriptional regulator K21959 ftsR; LysR family transcriptional regulator, cell division regulator D QF06_12910 LysR family transcriptional regulator K21960 ytlI; LysR family transcriptional regulator, regulator of the ytmI operon C DeoR family D QF06_06215 DeoR faimly transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D QF06_16620 stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D QF06_18350 DeoR faimly transcriptional regulator K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor D QF06_16550 DeoR faimly transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D QF06_10805 transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D QF06_00950 DeoR faimly transcriptional regulator K21601 ycnK; DeoR family transcriptional regulator, copper-sensing transcriptional repressor C LacI family D QF06_15465 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D QF06_16370 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D QF06_13075 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D QF06_13320 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D QF06_09265 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D QF06_04215 NTD biosynthesis operon regulator NtdR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D QF06_05180 LacI family transcriptional regulator K26609 exuR; LacI family transcriptional regulator, galacturonate utilization repressor C GntR family D QF06_15365 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D QF06_02785 trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D QF06_18530 GntR family transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA D QF06_01845 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D QF06_14600 GntR family transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator D QF06_00140 GntR family transcriptional regulator K24966 gamR; GntR family transcriptional regulator, amino sugar utilization regulator D QF06_15900 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D QF06_07460 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D QF06_00205 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D QF06_15470 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D QF06_11565 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D QF06_00915 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D QF06_01520 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D QF06_03680 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D QF06_01585 GntR family transcriptional regulator K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC D QF06_13420 GntR family transcriptional regulator K07979 ytrA; GntR family transcriptional regulator D QF06_18485 GntR family transcriptional regulator K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor C TetR/AcrR family D QF06_12475 TetR family transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D QF06_02335 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D QF06_00295 TetR family transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor D QF06_18450 TetR family transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor D QF06_11775 TetR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon C Lrp/AsnC family D QF06_01100 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QF06_02190 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QF06_16470 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D QF06_11515 ArsR family transcriptional regulator K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon C LuxR family D QF06_12410 LuxR family transcriptional regulator K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein D QF06_01980 transcriptional regulator K16247 gutR; LuxR family transcriptional regulator, glucitol operon activator C MarR family D QF06_16625 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D QF06_03920 transcriptional regulator Hpr K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr D QF06_05685 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D QF06_05845 transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D QF06_05590 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D QF06_07775 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D QF06_03720 MerR family transcriptional regulator K11923 cueR; MerR family transcriptional regulator, copper efflux regulator D QF06_10200 multidrug transporter K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene D QF06_16705 MerR family transcriptional regulator K21743 mta; MerR family transcriptional regulator, multidrug-efflux activator D QF06_11685 transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D QF06_05675 MerR family transcriptional regulator K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator D QF06_02600 MerR family transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon C Fur family D QF06_09945 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D QF06_10735 Fur family transcriptional regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D QF06_03200 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family C Rrf2 family D QF06_03630 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D QF06_11955 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D QF06_01565 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D QF06_11090 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D QF06_08675 ArsR family transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family D QF06_10495 transcriptional regulator K19449 sinR; XRE family transcriptional regulator, master regulator for biofilm formation D QF06_15565 transcriptional regulator K19417 slrR; XRE family transcriptional regulator, biofilm formation regulator C PadR family D QF06_03025 PadR family transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator D QF06_04470 DNA-binding protein K10947 K10947; PadR family transcriptional regulator D QF06_17445 DNA-binding protein K10947 K10947; PadR family transcriptional regulator C Other families D QF06_10450 manganese transport transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D QF06_02965 RpiR family transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D QF06_09415 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D QF06_04230 hypothetical protein K11925 sgrR; SgrR family transcriptional regulator D QF06_15190 XRE family transcriptional regulator K22299 rghR; HTH-type transcriptional regulator, competence development regulator D QF06_15185 XRE family transcriptional regulator K22299 rghR; HTH-type transcriptional regulator, competence development regulator D QF06_13840 transcriptional regulator K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator D QF06_15275 MarR family transcriptional regulator K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator D QF06_15300 MarR family transcriptional regulator K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator D QF06_11745 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D QF06_19240 purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D QF06_02920 acetoin dehydrogenase K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D QF06_14945 hypothetical protein K26990 rsoA; sigma-O factor regulatory protein RsoA D QF06_12540 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D QF06_18640 ATPase AAA K06714 rocR; arginine utilization regulatory protein D QF06_01940 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D QF06_07110 transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor D QF06_08495 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator D QF06_01435 Cro/Cl family transcriptional regulator K07729 K07729; putative transcriptional regulator D QF06_03380 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family D QF06_01295 antitoxin endoai K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C Other families B Other transcription factors C BglG family D QF06_18010 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator D QF06_17660 levansucrase K26931 sacY; levansucrase and sucrase synthesis operon transcriptional antiterminator D QF06_17475 levansucrase K26932 sacT; sacPA operon transcriptional antiterminator D QF06_05970 PtsGHI operon antiterminator K03480 glcT; transcriptional antiterminator D QF06_01055 PTS sugar transporter subunit IIA K03483 mtlR; mannitol operon transcriptional activator D QF06_04980 PTS sugar transporter subunit IIA K02538 manR; mannose operon transcriptional activator D QF06_17770 PTS fructose transporter subunit IIA K03491 licR; probable licABCH operon transcriptional regulator C Others D QF06_15105 transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D QF06_14525 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D QF06_00570 hypothetical protein K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D QF06_06260 AbrB family transcriptional regulator K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D QF06_19190 transition state regulator Abh K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D QF06_19285 stage VI sporulation protein D K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D QF06_18920 plasmid partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QF06_18935 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QF06_01455 transcription factor YdeB K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D QF06_03575 glycerol-3-phosphate responsive antiterminator GlpP K02443 glpP; glycerol uptake operon antiterminator D QF06_10315 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D QF06_10925 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor D QF06_04775 thiaminase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D QF06_04780 transcriptional regulator K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D QF06_19490 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D QF06_15940 membrane protein K03973 pspC; phage shock protein C D QF06_15355 central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator D QF06_18185 RNA polymerase sigma70 K05346 deoR; deoxyribonucleoside regulator D QF06_04590 transcriptional regulator K05519 med; transcriptional activator of comK gene D QF06_09580 transcription attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D QF06_06760 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D QF06_17250 Prespore-specific transcriptional regulator RsfA K06314 rsfA; prespore-specific regulator D QF06_05990 transcriptional regulator K06315 splA; transcriptional regulator of the spore photoproduct lyase operon D QF06_14385 protease K07734 paiB; transcriptional regulator D QF06_12700 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D QF06_18140 Hut operon positive regulatory protein K09683 hutP; hut operon positive regulatory protein D QF06_04135 competence protein K02250 comK; competence protein ComK D QF06_06590 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ D QF06_14960 membrane protein K26991 yvrL; membrane-bound negative regulator ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0