+D GENES KO #

  KEGG Orthology (KO) - Bifidobacterium adolescentis 22L

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:badl00010] D BADO_0240 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BADO_0053 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BADO_0887 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BADO_1130 glyceraldehyde 3-phosphate dehydrogenase C K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BADO_0888 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BADO_0922 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BADO_0384 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BADO_0689 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BADO_0722 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BADO_1167 L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BADO_0326 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BADO_1133 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D BADO_0371 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BADO_1014 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] C 00020 Citrate cycle (TCA cycle) [PATH:badl00020] D BADO_0476 citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D BADO_1102 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BADO_0825 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BADO_0858 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BADO_0857 succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BADO_0606 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BADO_0605 iron sulfur protein associated with succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] C 00030 Pentose phosphate pathway [PATH:badl00030] D BADO_0240 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BADO_0674 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BADO_0672 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D BADO_0205 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BADO_0671 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BADO_0842 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BADO_0882 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BADO_0883 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D BADO_0367 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BADO_0732 xylulose-5-phosphate/fructose-6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D BADO_1533 PfkB family sugar kinase K00852 rbsK; ribokinase [EC:2.7.1.15] D BADO_0371 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BADO_0946 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BADO_1534 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BADO_0207 putative gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D BADO_0053 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] C 00040 Pentose and glucuronate interconversions [PATH:badl00040] D BADO_1524 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D BADO_0866 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BADO_1620 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D BADO_0842 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BADO_1621 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D BADO_0437 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D BADO_0427 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D BADO_0324 xylitol (sorbitol) dehydrogenase K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9] C 00051 Fructose and mannose metabolism [PATH:badl00051] D BADO_0083 endo-1,4-beta-mannanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D BADO_1147 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D BADO_0427 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D BADO_0053 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BADO_0887 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:badl00052] D BADO_1133 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D BADO_1395 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BADO_1394 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D BADO_0397 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BADO_0866 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BADO_0371 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BADO_1714 beta-galactosidase, glycosyl hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BADO_1688 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BADO_1629 Beta-galactosidase BgaB K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D BADO_1650 beta-galactosidase I K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D BADO_1709 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D BADO_0167 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D BADO_0439 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BADO_1484 glycoside hydrolase, family 27 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BADO_1682 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BADO_1283 beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BADO_1401 glycosyl hydrolase family 32, N terminal domain protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BADO_0467 alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BADO_1445 alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BADO_1447 oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BADO_1677 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism [PATH:badl00053] D BADO_1524 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D BADO_1620 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:badl00500] D BADO_1283 beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BADO_1401 glycosyl hydrolase family 32, N terminal domain protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BADO_0467 alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BADO_1445 alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BADO_1447 oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BADO_0067 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D BADO_0866 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BADO_1348 beta-1,3-exoglucanase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D BADO_1350 beta-1,3-exoglucanase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D BADO_1705 thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1725 Glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1340 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1344 beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_0074 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BADO_1720 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BADO_0454 cellobiose-phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D BADO_0762 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D BADO_0711 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D BADO_0020 glycogen/starch phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D BADO_0754 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D BADO_1451 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D BADO_0753 putative alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D BADO_1639 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D BADO_1355 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D BADO_1677 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D BADO_0317 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D BADO_1446 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D BADO_1572 glycanase/glycogenase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D BADO_0799 glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D BADO_0727 glycogen operon protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D BADO_0320 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D BADO_0371 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BADO_0240 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BADO_1147 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:badl00520] D BADO_0684 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D BADO_1708 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D BADO_1147 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D BADO_0490 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BADO_1431 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D BADO_0926 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D BADO_0191 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BADO_0304 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BADO_0433 beta-1,4-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D BADO_0428 alpha-L-arabinofuranosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D BADO_1014 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D BADO_0371 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BADO_0866 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BADO_1524 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D BADO_1395 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BADO_1394 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D BADO_0397 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BADO_0167 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D BADO_0240 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BADO_0762 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:badl00620] D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BADO_1044 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D BADO_0326 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BADO_0734 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BADO_0733 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BADO_0722 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BADO_0262 acetyl-coA carboxylase carboxyl transferase subunit alpha JadJ K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BADO_1167 L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BADO_0321 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D BADO_0014 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D BADO_0156 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:badl00630] D BADO_0476 citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D BADO_1102 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BADO_0263 propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D BADO_0262 acetyl-coA carboxylase carboxyl transferase subunit alpha JadJ K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BADO_0871 hydrolase or phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D BADO_0999 glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_1181 glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_0950 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BADO_1383 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D BADO_1342 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BADO_0408 L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00640 Propanoate metabolism [PATH:badl00640] D BADO_0734 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BADO_0733 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BADO_1044 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D BADO_0262 acetyl-coA carboxylase carboxyl transferase subunit alpha JadJ K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BADO_0263 propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D BADO_0857 succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BADO_0858 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BADO_1167 L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BADO_0408 L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00650 Butanoate metabolism [PATH:badl00650] D BADO_0326 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BADO_0606 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BADO_0605 iron sulfur protein associated with succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BADO_1434 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D BADO_1044 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D BADO_0229 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BADO_0228 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:badl00660] D BADO_0229 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BADO_0228 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BADO_0857 succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BADO_0858 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BADO_0187 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D BADO_0188 isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D BADO_1386 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:badl00562] D BADO_0561 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BADO_0166 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D BADO_0850 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-] D BADO_0887 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:badl00190] D BADO_0606 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BADO_0605 iron sulfur protein associated with succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BADO_1602 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BADO_1604 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BADO_1603 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BADO_1601 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BADO_1605 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BADO_1598 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BADO_1600 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BADO_1599 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BADO_1571 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D BADO_0137 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:badl00710] D BADO_0888 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BADO_1130 glyceraldehyde 3-phosphate dehydrogenase C K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BADO_0053 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BADO_0882 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BADO_0367 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BADO_0887 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BADO_0842 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BADO_0883 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D BADO_0014 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] C 00720 Other carbon fixation pathways [PATH:badl00720] D BADO_0014 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D BADO_0606 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BADO_0605 iron sulfur protein associated with succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BADO_0858 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BADO_0857 succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BADO_0825 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BADO_1102 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BADO_0177 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D BADO_0717 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BADO_0805 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D BADO_0733 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BADO_0734 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:badl00680] D BADO_0950 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BADO_0689 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BADO_0014 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D BADO_0053 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BADO_1646 coenzyme F420 hydrogenase/dehydrogenase beta subunit K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D BADO_0734 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BADO_0733 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BADO_0922 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BADO_0384 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BADO_1162 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BADO_0389 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BADO_0558 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:badl00910] D BADO_0008 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D BADO_0999 glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_1181 glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_0796 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BADO_0797 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D BADO_0012 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:badl00920] D BADO_1597 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D BADO_0503 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:badl00061] D BADO_0262 acetyl-coA carboxylase carboxyl transferase subunit alpha JadJ K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BADO_0264 fatty acid synthase Fas K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D BADO_0770 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_1622 long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0823 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0828 long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:badl00071] D BADO_0770 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_1622 long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0823 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0828 long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0326 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:badl00121] D BADO_0911 choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:badl00561] D BADO_1342 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BADO_0977 haloacid dehalogenase (HAD) superfamily hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D BADO_1067 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BADO_0439 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BADO_1484 glycoside hydrolase, family 27 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BADO_1682 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:badl00564] D BADO_0193 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D BADO_1067 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BADO_0039 putative lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5] D BADO_0834 CdsA phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D BADO_1080 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D BADO_0845 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:badl00600] D BADO_1351 beta-D-xylosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45] D BADO_1714 beta-galactosidase, glycosyl hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BADO_1688 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BADO_0439 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BADO_1484 glycoside hydrolase, family 27 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BADO_1682 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D BADO_0419 Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:badl00230] D BADO_0726 NTP pyrophosphohydrolase including oxidative damage repair enzyme K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D BADO_0371 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BADO_0946 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BADO_1534 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BADO_0533 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D BADO_0531 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D BADO_0538 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D BADO_0536 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D BADO_0532 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D BADO_0528 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D BADO_0527 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D BADO_0537 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D BADO_0568 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BADO_0860 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BADO_0856 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BADO_0276 putative multicopper polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D BADO_0413 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D BADO_0465 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BADO_0826 GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BADO_0238 Xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D BADO_0737 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D BADO_0731 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BADO_0221 amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BADO_0551 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D BADO_1655 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D BADO_0509 putative dGTPase K01129 dgt; dGTPase [EC:3.1.5.1] D BADO_1054 GTP pyrophosphokinase/Guanosine-3',5'-bis(Diphosphate)3'-pyrop hosphohydrolase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D BADO_0692 exopolyphosphatase-like protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D BADO_1663 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D BADO_1084 GTP-pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D BADO_0054 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BADO_0349 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:badl00240] D BADO_0549 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BADO_0548 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BADO_0807 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D BADO_0808 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D BADO_0809 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D BADO_0812 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D BADO_0811 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D BADO_1392 putative dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D BADO_0813 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D BADO_0550 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D BADO_0810 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D BADO_0832 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D BADO_1617 maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D BADO_0755 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D BADO_0134 uracil phosphoribosyl transferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D BADO_1655 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D BADO_1686 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D BADO_0170 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D BADO_1055 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BADO_0394 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:badl00250] D BADO_0253 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BADO_0204 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BADO_1138 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D BADO_0046 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D BADO_1325 L-asparagineamidohydrolase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D BADO_1128 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D BADO_0884 bifunctional HTH-domain containing protein/aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BADO_1013 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BADO_0984 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BADO_0983 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BADO_0054 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BADO_0568 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BADO_0807 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D BADO_0808 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D BADO_1434 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D BADO_0796 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BADO_0797 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D BADO_0008 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D BADO_0999 glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_1181 glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_0549 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BADO_0548 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BADO_0490 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BADO_0533 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:badl00260] D BADO_0149 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BADO_0151 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BADO_1615 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BADO_1616 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D BADO_0951 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BADO_0540 low specificity-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D BADO_0950 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BADO_1342 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BADO_0922 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BADO_0384 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BADO_1162 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BADO_0389 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BADO_0558 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BADO_1383 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D BADO_0502 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D BADO_0694 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BADO_1676 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D BADO_0840 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D BADO_0839 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:badl00270] D BADO_0519 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BADO_0679 aminotransferase, class II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BADO_1322 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BADO_0502 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D BADO_0804 5-methyltetrahydropteroyltriglutamate--homocyste ine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D BADO_0554 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BADO_0283 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D BADO_0276 putative multicopper polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D BADO_0964 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BADO_1502 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BADO_0505 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D BADO_0149 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BADO_0151 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BADO_1615 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BADO_1597 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D BADO_0503 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D BADO_0611 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D BADO_0426 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D BADO_0791 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BADO_1652 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D BADO_0253 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BADO_0204 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BADO_1167 L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BADO_0694 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BADO_1162 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BADO_0389 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:badl00280] D BADO_0791 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BADO_0263 propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D BADO_0262 acetyl-coA carboxylase carboxyl transferase subunit alpha JadJ K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:badl00290] D BADO_1676 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D BADO_0187 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D BADO_0188 isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D BADO_1386 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D BADO_0229 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BADO_0228 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BADO_0070 Ketol-acid reductoisomerase 2 K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BADO_0071 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BADO_0552 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D BADO_0791 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BADO_0884 bifunctional HTH-domain containing protein/aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BADO_1013 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BADO_0156 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:badl00300] D BADO_1615 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BADO_0149 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BADO_0151 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BADO_1428 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D BADO_1422 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D BADO_0477 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D BADO_0987 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D BADO_0247 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BADO_1319 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D BADO_1614 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D BADO_1136 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diam inopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BADO_1155 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:badl00220] D BADO_0986 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D BADO_0984 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BADO_0983 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BADO_0999 glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_1181 glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_0549 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BADO_0548 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BADO_0008 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D BADO_0253 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BADO_0204 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BADO_0884 bifunctional HTH-domain containing protein/aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BADO_1013 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BADO_0989 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D BADO_1717 N-acetyltransferase GCN5 K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1] D BADO_0988 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D BADO_0990 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D BADO_0987 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:badl00330] D BADO_0621 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D BADO_0252 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D BADO_0949 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D BADO_0253 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BADO_0204 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:badl00340] D BADO_0844 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D BADO_0843 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D BADO_0837 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D BADO_1182 phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D BADO_1183 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D BADO_0836 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D BADO_1185 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D BADO_1186 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BADO_1187 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:badl00350] D BADO_0253 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BADO_0204 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BADO_1186 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BADO_0326 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:badl00360] D BADO_0253 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BADO_0204 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BADO_1186 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:badl00400] D BADO_0281 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BADO_0282 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BADO_0751 bifunctional shikimate kinase/3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D BADO_0752 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D BADO_0730 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D BADO_0750 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D BADO_0838 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BADO_1071 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D BADO_1182 phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D BADO_0840 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D BADO_0839 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D BADO_1563 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D BADO_1118 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D BADO_1117 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D BADO_0253 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BADO_0204 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BADO_1186 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D BADO_1434 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] C 00430 Taurine and hypotaurine metabolism [PATH:badl00430] D BADO_1434 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D BADO_0733 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BADO_0734 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:badl00450] D BADO_0503 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D BADO_0519 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BADO_0679 aminotransferase, class II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BADO_1322 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BADO_0804 5-methyltetrahydropteroyltriglutamate--homocyste ine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D BADO_0759 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D BADO_1737 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D BADO_1477 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:badl00460] D BADO_1705 thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1725 Glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1340 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1344 beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_0074 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BADO_1720 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BADO_0046 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D BADO_1325 L-asparagineamidohydrolase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D BADO_0950 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:badl00470] D BADO_0508 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BADO_0194 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BADO_1320 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BADO_1153 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BADO_1138 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D BADO_1319 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D BADO_1614 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:badl00480] D BADO_1652 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D BADO_1430 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D BADO_0825 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BADO_0205 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BADO_0671 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BADO_0674 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:badl00511] D BADO_1714 beta-galactosidase, glycosyl hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BADO_1688 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BADO_0078 glycosyl hydrolase family 2, sugar binding domain protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] D BADO_1351 beta-D-xylosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:badl00542] D BADO_0464 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:badl00541] D BADO_0866 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BADO_0397 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BADO_0167 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D BADO_1524 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D BADO_1358 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BADO_1528 rhamnose biosynthesis dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BADO_1356 rhamnose biosynthesis dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BADO_1357 fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] D BADO_0926 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:badl00550] D BADO_0191 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BADO_0304 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BADO_1150 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BADO_1153 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BADO_1136 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diam inopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BADO_0194 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BADO_1155 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BADO_1305 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BADO_0878 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BADO_1154 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BADO_1151 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BADO_1157 peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BADO_0030 penicillin binding protein transpeptidase K05364 pbpA; penicillin-binding protein A D BADO_0412 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D BADO_0128 putative UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelat e ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D BADO_0129 cobyric acid synthase CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:badl00552] D BADO_0878 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BADO_0464 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:badl00543] D BADO_0464 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:badl00730] D BADO_1279 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D BADO_0099 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D BADO_0525 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D BADO_0098 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D BADO_1277 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D BADO_1278 thiamine biosynthesis protein ThiC K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D BADO_1460 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BADO_1129 thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D BADO_0349 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BADO_0929 transcriptional activator TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D BADO_1016 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:badl00740] D BADO_0423 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D BADO_0364 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D BADO_1437 nitroreductase family protein K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D BADO_1277 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D BADO_0726 NTP pyrophosphohydrolase including oxidative damage repair enzyme K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:badl00750] D BADO_0610 pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D BADO_0101 aldo/keto reductase family oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D BADO_0272 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D BADO_0389 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BADO_0951 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BADO_1624 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D BADO_1625 glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:badl00760] D BADO_0236 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D BADO_0947 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D BADO_1381 phosphohydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D BADO_1046 glutamine-dependent NAD(+) synthetase NadE K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D BADO_1079 CinA-like protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D BADO_1675 Sir2-type regulatory protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D BADO_0973 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D BADO_0771 NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D BADO_0772 NAD(P) transhydrogenase alpha2 subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D BADO_0773 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:badl00770] D BADO_0229 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BADO_0228 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BADO_0070 Ketol-acid reductoisomerase 2 K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BADO_0071 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BADO_0552 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D BADO_0494 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D BADO_0495 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D BADO_0234 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D BADO_0719 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D BADO_0265 putative holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D BADO_0791 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:badl00780] D BADO_0260 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:badl00785] D BADO_1388 lipoate protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BADO_1383 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:badl00790] D BADO_0415 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D BADO_1460 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BADO_0417 aldolase-pyrophosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3] D BADO_0416 dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D BADO_0395 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D BADO_1139 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D BADO_0027 para-aminobenzoate synthase glutamine amidotransferase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D BADO_0064 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] C 00670 One carbon pool by folate [PATH:badl00670] D BADO_0395 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D BADO_0177 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D BADO_0717 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BADO_0950 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BADO_0860 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BADO_0557 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BADO_0394 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D BADO_0805 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D BADO_0299 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism D BADO_0184 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis D BADO_0383 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:badl00900] D BADO_0525 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D BADO_1309 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D BADO_0277 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D BADO_1730 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D BADO_0713 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D BADO_1308 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D BADO_1132 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D BADO_1065 bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D BADO_1305 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D BADO_0882 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:badl00523] D BADO_1358 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BADO_1528 rhamnose biosynthesis dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BADO_1356 rhamnose biosynthesis dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BADO_1357 fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:badl01054] D BADO_1138 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D BADO_1528 rhamnose biosynthesis dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BADO_1356 rhamnose biosynthesis dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:badl00946] D BADO_1705 thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1725 Glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1340 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1344 beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_0074 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BADO_1720 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:badl00332] D BADO_0252 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D BADO_0949 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:badl00261] D BADO_0149 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BADO_0151 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BADO_1428 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D BADO_1422 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:badl00521] D BADO_0371 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BADO_0166 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D BADO_0561 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BADO_1358 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BADO_1528 rhamnose biosynthesis dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BADO_1356 rhamnose biosynthesis dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BADO_1357 fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:badl00525] D BADO_1358 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BADO_1528 rhamnose biosynthesis dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BADO_1356 rhamnose biosynthesis dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:badl00401] D BADO_1117 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D BADO_0253 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BADO_0204 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BADO_1186 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D BADO_0838 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:badl00999] D BADO_0554 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BADO_1705 thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1725 Glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1340 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_1344 beta-D-glucosideglucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BADO_0074 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BADO_1720 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D BADO_0909 putative carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:badl00625] D BADO_0326 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BADO_0815 alpha beta hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D BADO_0815 alpha beta hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:badl00626] D BADO_0326 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:badl03020] D BADO_1407 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BADO_1408 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BADO_0354 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BADO_0553 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:badl03010] D BADO_0718 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BADO_0830 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BADO_0334 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D BADO_0742 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BADO_0345 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BADO_1535 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BADO_0543 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BADO_0342 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BADO_0319 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BADO_0327 Ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BADO_0353 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BADO_0542 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BADO_0352 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D BADO_0341 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BADO_0267 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BADO_0217 30S ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D BADO_0337 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BADO_1537 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BADO_0332 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BADO_0793 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BADO_0257 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BADO_0331 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BADO_0328 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BADO_0329 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D BADO_0340 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D BADO_0343 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D BADO_0293 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BADO_1538 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BADO_0292 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BADO_0256 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D BADO_0318 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BADO_0338 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BADO_0347 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BADO_0335 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BADO_0355 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BADO_0344 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BADO_0241 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BADO_1125 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D BADO_0249 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BADO_0333 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BADO_0330 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BADO_0339 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BADO_0790 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D BADO_0250 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BADO_0211 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BADO_0336 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BADO_0346 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D BADO_0455 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BADO_0231 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BADO_0303 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BADO_1745 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BADO_1126 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BADO_0351 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BADO_1rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_4rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_3rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_2rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_1rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_4rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_2rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_3rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_1rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_3rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_4rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_2rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_5rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:badl00970] D BADO_tRNA48 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BADO_tRNA45 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BADO_tRNA01 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BADO_tRNA02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BADO_tRNA30 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BADO_tRNA31 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BADO_tRNA53 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BADO_tRNA25 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BADO_tRNA52 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BADO_tRNA36 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BADO_tRNA44 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BADO_tRNA37 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BADO_tRNA20 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BADO_tRNA22 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BADO_tRNA41 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D BADO_tRNA46 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BADO_tRNA08 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BADO_tRNA07 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BADO_tRNA21 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BADO_tRNA05 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BADO_tRNA12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BADO_tRNA42 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BADO_tRNA43 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BADO_tRNA26 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BADO_tRNA29 tRNA-His K14226 tRNA-His; tRNA His D BADO_tRNA03 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BADO_tRNA24 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BADO_tRNA04 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BADO_tRNA10 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BADO_tRNA35 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BADO_tRNA33 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BADO_tRNA32 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BADO_tRNA50 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BADO_tRNA06 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BADO_tRNA15 tRNA-Met K14230 tRNA-Met; tRNA Met D BADO_tRNA51 tRNA-Met K14230 tRNA-Met; tRNA Met D BADO_tRNA23 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BADO_tRNA34 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BADO_tRNA19 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BADO_tRNA38 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BADO_tRNA18 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BADO_tRNA17 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BADO_tRNA49 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BADO_tRNA16 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BADO_tRNA14 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BADO_tRNA09 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BADO_tRNA54 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BADO_tRNA11 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D BADO_tRNA13 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BADO_tRNA28 tRNA-Val K14237 tRNA-Val; tRNA Val D BADO_tRNA40 tRNA-Val K14237 tRNA-Val; tRNA Val D BADO_tRNA27 tRNA-Val K14237 tRNA-Val; tRNA Val D BADO_tRNA39 tRNA-Val K14237 tRNA-Val; tRNA Val D BADO_tRNA47 tRNA-Val K14237 tRNA-Val; tRNA Val D BADO_0184 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BADO_1556 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D BADO_1557 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D BADO_1555 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D BADO_0746 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BADO_0589 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BADO_1196 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BADO_0849 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BADO_0375 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BADO_0220 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BADO_1477 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BADO_0557 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BADO_1565 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BADO_0919 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BADO_1333 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BADO_0382 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BADO_1613 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BADO_0472 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BADO_0588 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BADO_0993 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BADO_0992 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BADO_0979 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BADO_0017 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:badl03060] D BADO_0348 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BADO_0254 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BADO_0886 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BADO_0855 translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BADO_1742 membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D BADO_1072 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BADO_0219 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BADO_0122 FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor D BADO_0242 signal peptidase I LepB K03100 lepB; signal peptidase I [EC:3.4.21.89] D BADO_1190 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:badl04122] D BADO_0100 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D BADO_0099 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome D BADO_0559 AAA ATPase family protein K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:badl03018] D BADO_0248 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D BADO_0689 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BADO_0268 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BADO_0504 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BADO_1561 transcription termination factor Rho K03628 rho; transcription termination factor Rho D BADO_1429 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D BADO_1461 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BADO_0578 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BADO_0137 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D BADO_1732 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:badl03030] D BADO_0631 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BADO_1038 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BADO_1188 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BADO_0147 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BADO_0171 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BADO_0916 DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BADO_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BADO_0127 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BADO_0510 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BADO_1536 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_1267 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_0473 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D BADO_0368 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BADO_0243 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BADO_1008 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:badl03410] D BADO_1567 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BADO_0576 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BADO_1405 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BADO_1108 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BADO_1008 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:badl03420] D BADO_0688 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D BADO_0893 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D BADO_0787 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A D BADO_0720 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D BADO_0892 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D BADO_1419 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BADO_1314 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BADO_0738 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BADO_1008 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:badl03430] D BADO_1419 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BADO_1314 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BADO_0738 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BADO_1656 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D BADO_1657 Exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D BADO_1536 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_1267 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_0473 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D BADO_1188 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BADO_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BADO_0147 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BADO_0916 DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BADO_0171 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BADO_0631 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BADO_1038 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BADO_1008 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:badl03440] D BADO_1536 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_1267 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_0473 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D BADO_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D BADO_1306 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D BADO_0148 recombination protein RecR K06187 recR; recombination protein RecR D BADO_1076 recombinase A K03553 recA; recombination protein RecA D BADO_0853 holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D BADO_0854 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BADO_0852 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D BADO_0212 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BADO_0189 putative divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BADO_1188 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BADO_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BADO_0147 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BADO_0916 DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BADO_0171 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BADO_0631 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BADO_1038 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BADO_0555 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:badl03250] D BADO_1053 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:badl02010] D BADO_1699 ATP binding protein of ABC transporter for sugars K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BADO_1448 ABC transporter, solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D BADO_1449 maltodextrin transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BADO_1450 sugar ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BADO_0430 putative sugar transporter solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BADO_1680 ABC transporter, sugar substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BADO_1691 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BADO_0075 carbohydrate ABC transporter substrate-binding protein, CUT1 family K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BADO_0431 putative binding protein-dependent transporter K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BADO_1679 sugar permease of ABC transporter system K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BADO_1692 ABC transporter membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BADO_0076 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BADO_0432 putative binding protein-dependent transporter K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BADO_1678 sugar permease of ABC transporter system K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BADO_1693 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BADO_1396 ABC transporter K17318 lplA; putative aldouronate transport system substrate-binding protein D BADO_1397 polysaccharide ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D BADO_1398 sugar ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D BADO_0286 phosphate-binding transport protein of ABC transporter system K02040 pstS; phosphate transport system substrate-binding protein D BADO_0287 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D BADO_0288 phosphate ABC transporter phosphate-binding protein K02038 pstA; phosphate transport system permease protein D BADO_0289 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BADO_0590 glutamine ABC transporter (binding and transport protein) K10036 glnH; glutamine transport system substrate-binding protein D BADO_0591 putative amino acid ABC transporter K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D BADO_0593 glutamate-binding protein of ABC transporter system K10005 gluB; glutamate transport system substrate-binding protein D BADO_0920 Glutamate-binding protein GluB K10005 gluB; glutamate transport system substrate-binding protein D BADO_0594 permease protein of ABC transporter for glutamate K10006 gluC; glutamate transport system permease protein D BADO_0595 permease protein of ABC transporter for glutamate K10007 gluD; glutamate transport system permease protein D BADO_0592 ATP-binding protein of ABC transporter for glutamate K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D BADO_0458 solute binding protein of ABC transporter for branched-chain amino acids K01999 livK; branched-chain amino acid transport system substrate-binding protein D BADO_0062 branched-chain amino acid transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D BADO_0058 branched-chain amino acid ABC-type transport system permease components K01997 livH; branched-chain amino acid transport system permease protein D BADO_0459 permease of ABC transporter for branched-chain amino acids K01997 livH; branched-chain amino acid transport system permease protein D BADO_0460 permease of ABC transporter for branched-chain amino acids K01998 livM; branched-chain amino acid transport system permease protein D BADO_0059 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D BADO_0461 ATP binding protein of ABC transporter for branched-chain amino acids K01995 livG; branched-chain amino acid transport system ATP-binding protein D BADO_0060 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D BADO_0061 ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BADO_0462 ATP binding protein of ABC transporter for branched-chain amino acids K01996 livF; branched-chain amino acid transport system ATP-binding protein D BADO_1049 TonB-dependent receptor K02073 metQ; D-methionine transport system substrate-binding protein D BADO_1051 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D BADO_1050 D-methionine ABC transporter K02071 metN; D-methionine transport system ATP-binding protein D BADO_1324 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BADO_1112 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BADO_1111 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D BADO_1110 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D BADO_1109 dipeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BADO_0261 Biotin BioY-family transporter K03523 bioY; biotin transport system substrate-specific component D BADO_1012 ATP binding protein of ABC transporter K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D BADO_0784 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D BADO_0614 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D BADO_1004 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D BADO_1173 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D BADO_0482 FtsX-like protein in cell division K09811 ftsX; cell division transport system permease protein D BADO_0481 FtsE-like ATP binding protein in cell division K09812 ftsE; cell division transport system ATP-binding protein D BADO_1481 ABC transporter, permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_1482 ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_0103 ABC transporter permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_1338 ATP-binding protein of ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_1337 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_0104 ABC transporter permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_1623 ATP binding protein of ABC transporter K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD C 02060 Phosphotransferase system (PTS) [PATH:badl02060] D BADO_0174 PTS system, enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BADO_0173 Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D BADO_0372 PTS system, glucose-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:badl03070] D BADO_0254 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BADO_0886 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BADO_0348 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BADO_0855 translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BADO_1742 membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D BADO_1072 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BADO_0122 FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor D BADO_0219 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:badl02020] D BADO_1460 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BADO_0284 sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BADO_0387 two-component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BADO_0285 response regulator of two-component system K07776 regX3; two-component system, OmpR family, response regulator RegX3 D BADO_0286 phosphate-binding transport protein of ABC transporter system K02040 pstS; phosphate transport system substrate-binding protein D BADO_0044 trypsin-like serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D BADO_0001 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D BADO_0670 lysine--tRNA ligase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D BADO_0037 two component transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D BADO_0139 TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D BADO_0140 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B D BADO_0126 protein-PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D BADO_0125 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D BADO_0999 glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_1181 glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_1203 type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D BADO_1389 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BADO_0396 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D BADO_1637 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:badl02024] D BADO_0505 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D BADO_0838 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BADO_1640 glycosyl transferase, group 2 family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D BADO_0281 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BADO_0282 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BADO_1434 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D BADO_1433 APC family amino acid antiporter K20265 gadC; glutamate:GABA antiporter D BADO_0195 ABC transporter solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D BADO_0197 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D BADO_0196 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D BADO_0198 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D BADO_0458 solute binding protein of ABC transporter for branched-chain amino acids K01999 livK; branched-chain amino acid transport system substrate-binding protein D BADO_0062 branched-chain amino acid transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D BADO_0058 branched-chain amino acid ABC-type transport system permease components K01997 livH; branched-chain amino acid transport system permease protein D BADO_0459 permease of ABC transporter for branched-chain amino acids K01997 livH; branched-chain amino acid transport system permease protein D BADO_0460 permease of ABC transporter for branched-chain amino acids K01998 livM; branched-chain amino acid transport system permease protein D BADO_0059 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D BADO_0461 ATP binding protein of ABC transporter for branched-chain amino acids K01995 livG; branched-chain amino acid transport system ATP-binding protein D BADO_0060 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D BADO_0061 ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BADO_0462 ATP binding protein of ABC transporter for branched-chain amino acids K01996 livF; branched-chain amino acid transport system ATP-binding protein D BADO_1416 fibronectin type III domain-containing protein K20276 bapA; large repetitive protein D BADO_0770 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_1622 long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0823 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0828 long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_1389 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BADO_0083 endo-1,4-beta-mannanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D BADO_0423 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D BADO_0512 integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D BADO_1324 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BADO_1112 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BADO_1111 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D BADO_1110 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D BADO_1109 dipeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BADO_0496 solute binding protein of ABC transporter systemy for peptides K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BADO_1145 solute-binding protein of ABC transporter for peptides K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BADO_1566 ABC transporter solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BADO_0497 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D BADO_1144 oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BADO_0498 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BADO_1143 oligopeptide transport ATP-binding protein OppD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BADO_1142 ATP binding protein of ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D BADO_0499 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D BADO_0500 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D BADO_1742 membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D BADO_0254 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BADO_0886 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BADO_0348 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BADO_0855 translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BADO_1072 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BADO_0122 FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor D BADO_0219 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D BADO_1063 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D BADO_0689 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:badl01501] D BADO_0684 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D BADO_1324 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BADO_1112 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BADO_1111 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D BADO_1110 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D BADO_1109 dipeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BADO_1157 peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:badl01502] D BADO_0194 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BADO_0508 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BADO_1155 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BADO_1154 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BADO_1151 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:badl01503] D BADO_1053 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D BADO_0670 lysine--tRNA ligase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:badl01000] C 01001 Protein kinases [BR:badl01001] D BADO_0029 serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BADO_0028 serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BADO_1066 serine-threonine protein kinase pknA2 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BADO_0154 serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BADO_1417 serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BADO_1372 lipopolysaccharide biosynthesis K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D BADO_0284 sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BADO_0387 two-component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BADO_0582 Two component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D BADO_0698 histidine kinase-like protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:badl01009] D BADO_0032 phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D BADO_1412 phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D BADO_0558 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:badl01002] D BADO_1190 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D BADO_1200 type IV prepilin-like leader peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D BADO_0749 peptidase A24A, prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D BADO_1021 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D BADO_0280 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D BADO_0278 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D BADO_0731 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BADO_0221 amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BADO_0391 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BADO_0483 CHAP domain containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BADO_0390 CHAP domain containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BADO_0533 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D BADO_0796 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BADO_0490 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BADO_1128 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D BADO_0911 choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D BADO_0089 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D BADO_0093 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D BADO_0445 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D BADO_1458 sortase SrtB K07284 srtA; sortase A [EC:3.4.22.70] D BADO_1545 sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70] D BADO_0026 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D BADO_0176 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D BADO_0119 dipeptidase A K08659 pepDA; dipeptidase [EC:3.4.-.-] D BADO_0199 CAAX amino protease K07052 K07052; CAAX protease family protein D BADO_1430 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D BADO_0474 Zinc metalloprotease K07386 pepO; putative endopeptidase [EC:3.4.24.-] D BADO_0247 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BADO_0475 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D BADO_1140 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D BADO_0414 ATP-dependent zinc metallopeptidase involved in cell division K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BADO_0049 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D BADO_0044 trypsin-like serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D BADO_0035 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D BADO_1385 protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D BADO_0412 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D BADO_0600 ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BADO_0601 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BADO_1312 peptidase S16 K07177 K07177; Lon-like protease D BADO_1165 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D BADO_0242 signal peptidase I LepB K03100 lepB; signal peptidase I [EC:3.4.21.89] D BADO_1585 prohead peptidase K06904 GP4; Escherichia/Staphylococcus phage prohead protease D BADO_1325 L-asparagineamidohydrolase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D BADO_0275 protease, putative collagenase K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:badl01003] D BADO_0799 glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D BADO_0402 glycosyltransferase I K21011 pelF; polysaccharide biosynthesis protein PelF D BADO_0464 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D BADO_1015 glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] C 01005 Lipopolysaccharide biosynthesis proteins [BR:badl01005] D BADO_1640 glycosyl transferase, group 2 family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D BADO_0464 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:badl01011] D BADO_0191 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BADO_0304 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BADO_1150 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BADO_1153 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BADO_1136 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diam inopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BADO_0194 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BADO_0508 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BADO_1320 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BADO_1154 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BADO_1151 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BADO_0878 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BADO_1735 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D BADO_1157 peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BADO_0030 penicillin binding protein transpeptidase K05364 pbpA; penicillin-binding protein A D BADO_0412 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D BADO_0391 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BADO_0483 CHAP domain containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BADO_0390 CHAP domain containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BADO_0089 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D BADO_0093 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D BADO_0445 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D BADO_1458 sortase SrtB K07284 srtA; sortase A [EC:3.4.22.70] D BADO_1545 sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70] D BADO_0026 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D BADO_0748 YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:badl01004] D BADO_0264 fatty acid synthase Fas K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D BADO_0419 Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D BADO_0770 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_1622 long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0823 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0828 long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_1067 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:badl01008] D BADO_1138 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:badl01006] D BADO_1065 bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D BADO_1305 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BADO_1082 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BADO_0383 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:badl01007] D BADO_0184 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BADO_1542 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D BADO_0979 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BADO_0017 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BADO_0220 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BADO_1613 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BADO_1477 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BADO_1333 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BADO_1565 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BADO_0919 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BADO_0382 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BADO_0589 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BADO_0588 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BADO_1196 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BADO_0375 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BADO_0472 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BADO_0849 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BADO_0746 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BADO_0993 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BADO_0992 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BADO_0253 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BADO_0204 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BADO_0884 bifunctional HTH-domain containing protein/aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BADO_1013 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BADO_1186 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BADO_0679 aminotransferase, class II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BADO_1322 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BADO_0987 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D BADO_0791 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BADO_0389 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:badl00194] D BADO_1605 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BADO_1604 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BADO_1603 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BADO_1602 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BADO_1601 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BADO_1600 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BADO_1599 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BADO_1598 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:badl03000] D BADO_0964 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BADO_1502 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BADO_0172 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BADO_1101 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BADO_0429 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BADO_0440 LacI-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BADO_1281 LacI-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BADO_1335 LacI-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BADO_1400 LacI-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BADO_1530 ribose operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BADO_1715 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BADO_0466 LacI-type transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D BADO_1441 LacI-type transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D BADO_0063 LacI-type transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D BADO_1649 TetR-type transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D BADO_1562 AsnC-type transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BADO_0102 MarR-type transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D BADO_1464 MerR-type-transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D BADO_1212 transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D BADO_0529 metal uptake regulator ferric uptake regulator protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D BADO_1389 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BADO_0944 transcription regulator ArsR K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D BADO_0260 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D BADO_1218 hypothetical protein K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator D BADO_0373 transcription antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator D BADO_0699 hypothetical protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D BADO_0703 WhiB-type transcription regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D BADO_1423 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D BADO_1738 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BADO_0712 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D BADO_0985 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D BADO_0881 heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D BADO_0929 transcriptional activator TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D BADO_1016 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D BADO_1163 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D BADO_1160 MraZ family transcriptional regulator K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:badl03021] D BADO_0354 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BADO_1407 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BADO_1408 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BADO_0553 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BADO_1063 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D BADO_1135 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D BADO_0360 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D BADO_0547 transcription termination factor K03625 nusB; transcription antitermination protein NusB D BADO_0255 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D BADO_0696 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D BADO_1561 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:badl03019] D BADO_0248 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D BADO_0230 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BADO_1429 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D BADO_0468 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D BADO_1262 oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-] D BADO_0504 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BADO_0689 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BADO_0268 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BADO_1561 transcription termination factor Rho K03628 rho; transcription termination factor Rho D BADO_1461 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BADO_0578 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BADO_0137 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D BADO_1732 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D BADO_0890 ATP-binding protein K06958 rapZ; RNase adapter protein RapZ D BADO_0869 helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D BADO_1170 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:badl03011] D BADO_0718 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BADO_0830 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BADO_0334 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D BADO_0742 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BADO_0345 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BADO_1535 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BADO_0543 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BADO_0342 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BADO_0319 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BADO_0327 Ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BADO_0353 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BADO_0542 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BADO_0352 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D BADO_0341 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BADO_0267 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BADO_0217 30S ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D BADO_0337 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BADO_1537 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BADO_0332 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BADO_0793 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BADO_0257 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BADO_0331 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BADO_0328 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BADO_0329 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D BADO_0340 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D BADO_0343 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D BADO_1538 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BADO_0292 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BADO_0256 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D BADO_0293 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BADO_0318 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BADO_0338 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BADO_0347 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BADO_0335 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BADO_0355 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BADO_0344 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BADO_0241 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BADO_1125 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D BADO_0249 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BADO_0333 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BADO_0330 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BADO_0339 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BADO_0250 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BADO_0211 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BADO_0336 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BADO_0346 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D BADO_0455 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BADO_0231 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BADO_0303 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BADO_1745 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BADO_1126 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BADO_0351 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BADO_0790 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D BADO_1rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_3rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_4rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_2rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_5rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_1rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_4rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_3rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_2rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_1rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_4rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_2rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_3rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:badl03009] D BADO_0230 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BADO_0468 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D BADO_1262 oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-] D BADO_0769 GTP-binding protein Era K03595 era; GTPase D BADO_0251 GTP-binding protein, GTP1/OBG family K03979 obgE; GTPase [EC:3.6.5.-] D BADO_0360 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D BADO_0547 transcription termination factor K03625 nusB; transcription antitermination protein NusB D BADO_0255 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D BADO_1729 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BADO_1169 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D BADO_0213 putative rRNA (guanine-N(2)-)-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D BADO_0764 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BADO_1740 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BADO_1159 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BADO_1474 S-adenosylmethionine-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BADO_0976 hemolysin-like protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D BADO_1697 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BADO_0478 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D BADO_0835 Radical SAM family enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BADO_0491 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D BADO_0863 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BADO_1189 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BADO_0913 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D BADO_0215 16S rRNA-processing protein rimM K02860 rimM; 16S rRNA processing protein RimM D BADO_0248 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D BADO_0747 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D BADO_0864 cytidylate kinase K03977 engA; GTPase D BADO_1168 GTP-binding protein K03665 hflX; GTPase D BADO_0463 Sua5/YciO/YrdC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BADO_1054 GTP pyrophosphokinase/Guanosine-3',5'-bis(Diphosphate)3'-pyrop hosphohydrolase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D BADO_0362 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D BADO_0925 iojap protein family K09710 ybeB; ribosome-associated protein D BADO_0767 putative metalloprotease K07042 ybeY; probable rRNA maturation factor D BADO_1017 hypothetical protein K07574 yhbY; RNA-binding protein D BADO_0622 GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase D BADO_0232 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:badl03016] D BADO_0184 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BADO_0472 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BADO_1333 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BADO_0919 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BADO_1477 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BADO_1613 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BADO_0382 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BADO_0589 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BADO_0746 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BADO_1196 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BADO_0849 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BADO_0375 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BADO_0220 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BADO_1565 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BADO_0588 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BADO_0993 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BADO_0992 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BADO_0979 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BADO_0017 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BADO_1025 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D BADO_0765 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BADO_0801 tRNA (adenine-N(1)-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D BADO_0398 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D BADO_0356 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D BADO_0363 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D BADO_0463 Sua5/YciO/YrdC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BADO_1082 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BADO_1744 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D BADO_0237 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D BADO_1041 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D BADO_1542 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D BADO_1131 YbaK / prolyl-tRNA synthetases associated domain K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D BADO_1083 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D BADO_0214 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D BADO_1404 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D BADO_0994 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D BADO_0491 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D BADO_0043 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D BADO_0914 glycoprotease protein family K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D BADO_0912 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D BADO_0915 putative ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D BADO_0268 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:badl03012] D BADO_0361 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D BADO_1127 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D BADO_0831 elongation factor Ts K02357 tsf; elongation factor Ts D BADO_0545 elongation factor Tu K02358 tuf; elongation factor Tu D BADO_0544 elongation factor G K02355 fusA; elongation factor G D BADO_0456 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D BADO_0833 ribosome recycling factor K02838 frr; ribosome recycling factor D BADO_0457 methylase protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D BADO_0687 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D BADO_0350 Translation initiation factor 1 (IF-1) K02518 infA; translation initiation factor IF-1 D BADO_0546 translation elongation factor P K02356 efp; elongation factor P D BADO_0480 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:badl03110] D BADO_1550 chaperone clpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D BADO_0586 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D BADO_0602 ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D BADO_1461 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BADO_0578 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BADO_0880 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D BADO_1463 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D BADO_1462 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D BADO_0041 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D BADO_0302 co-chaperonin GroES K04078 groES; chaperonin GroES D BADO_0414 ATP-dependent zinc metallopeptidase involved in cell division K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BADO_1598 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BADO_1053 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D BADO_1378 thioredoxin K03671 TXN; thioredoxin D BADO_1610 Thioredoxin domain-containing protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:badl04131] D BADO_1130 glyceraldehyde 3-phosphate dehydrogenase C K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BADO_0922 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BADO_0384 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BADO_0722 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BADO_0210 major facilitator superfamily protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:badl04121] D BADO_0562 Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:badl03051] D BADO_0559 AAA ATPase family protein K13527 mpa; proteasome-associated ATPase D BADO_0563 proteasome-associated protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D BADO_0560 proteasome-associated protein K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:badl03032] D BADO_0368 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BADO_0964 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BADO_1502 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BADO_0965 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D BADO_0566 DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D BADO_0001 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D BADO_0127 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BADO_0510 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BADO_1536 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_1267 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_0473 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D BADO_1188 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BADO_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BADO_0916 DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BADO_0171 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BADO_0631 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BADO_1038 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BADO_0147 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BADO_0243 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BADO_1008 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BADO_1059 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BADO_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BADO_1062 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BADO_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BADO_0169 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:badl03036] D BADO_0964 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BADO_1502 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BADO_0230 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BADO_0566 DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D BADO_0001 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D BADO_1562 AsnC-type transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BADO_0481 FtsE-like ATP binding protein in cell division K09812 ftsE; cell division transport system ATP-binding protein D BADO_1157 peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BADO_1081 DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D BADO_0700 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D BADO_1149 cell division protein K03589 ftsQ; cell division protein FtsQ D BADO_1152 FtsW-like protein K03588 ftsW; cell division protein FtsW D BADO_0482 FtsX-like protein in cell division K09811 ftsX; cell division transport system permease protein D BADO_1194 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BADO_1193 hypothetical protein K09772 sepF; cell division inhibitor SepF D BADO_1739 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D BADO_1661 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D BADO_1123 sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D BADO_1738 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BADO_1740 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BADO_1113 site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D BADO_1124 tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD D BADO_1573 phage family integrase/recombinase protein K04763 xerD; integrase/recombinase XerD D BADO_1007 Mrp ATPase family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D BADO_0954 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D BADO_0889 putative transcriptional regulatory protein whia K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:badl03400] D BADO_0677 putative 6-O-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D BADO_0576 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BADO_1405 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BADO_1567 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BADO_1668 MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BADO_1122 hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BADO_1055 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BADO_1108 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BADO_1008 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BADO_0893 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D BADO_0787 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A D BADO_0720 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D BADO_0892 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D BADO_1419 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BADO_1314 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BADO_0738 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BADO_1407 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BADO_1408 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BADO_0354 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BADO_0553 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BADO_0688 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D BADO_1656 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D BADO_1657 Exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D BADO_1188 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BADO_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BADO_0916 DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BADO_0171 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BADO_0631 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BADO_1038 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BADO_0147 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BADO_1536 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_1267 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_0473 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D BADO_1665 XorII very-short-patch-repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D BADO_1076 recombinase A K03553 recA; recombination protein RecA D BADO_0853 holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D BADO_0854 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BADO_0852 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D BADO_0555 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D BADO_0365 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D BADO_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D BADO_0212 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BADO_0189 putative divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BADO_1306 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D BADO_0148 recombination protein RecR K06187 recR; recombination protein RecR D BADO_0972 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D BADO_1326 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D BADO_1059 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BADO_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BADO_1062 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BADO_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BADO_0169 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D BADO_0566 DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D BADO_0504 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BADO_0312 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D BADO_0534 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D BADO_1165 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D BADO_1075 RecX-like protein K03565 recX; regulatory protein D BADO_1667 DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4] D BADO_1060 ATP-dependent helicase II K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D BADO_0136 MutT1 protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] C 03029 Mitochondrial biogenesis [BR:badl03029] D BADO_0361 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D BADO_1127 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D BADO_0831 elongation factor Ts K02357 tsf; elongation factor Ts D BADO_0545 elongation factor Tu K02358 tuf; elongation factor Tu D BADO_0544 elongation factor G K02355 fusA; elongation factor G D BADO_0769 GTP-binding protein Era K03595 era; GTPase D BADO_0979 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BADO_0919 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BADO_0589 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BADO_1196 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BADO_1613 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BADO_1556 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D BADO_1557 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D BADO_1555 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D BADO_0965 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3] D BADO_1536 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_1267 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BADO_0473 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D BADO_1461 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BADO_1462 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D BADO_0578 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BADO_0302 co-chaperonin GroES K04078 groES; chaperonin GroES D BADO_0880 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D BADO_1463 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D BADO_1007 Mrp ATPase family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D BADO_1742 membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:badl02000] D BADO_1481 ABC transporter, permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_1482 ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_0103 ABC transporter permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_1338 ATP-binding protein of ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_1337 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_0104 ABC transporter permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BADO_1623 ATP binding protein of ABC transporter K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD D BADO_0222 ATP binding protein of ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein D BADO_0195 ABC transporter solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D BADO_0197 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D BADO_0196 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D BADO_0198 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D BADO_1302 ABC transporter solute-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D BADO_1699 ATP binding protein of ABC transporter for sugars K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BADO_1440 ABC transporter, solute-binding protein K25086 musE; maltose transport system substrate-binding protein D BADO_1442 ABC transporter, permease protein K25087 musF; maltose transport system permease protein D BADO_1443 ABC transporter, permease protein K25088 musG; maltose transport system permease protein D BADO_1448 ABC transporter, solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D BADO_1449 maltodextrin transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BADO_1450 sugar ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BADO_0430 putative sugar transporter solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BADO_1680 ABC transporter, sugar substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BADO_1691 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BADO_0075 carbohydrate ABC transporter substrate-binding protein, CUT1 family K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BADO_0431 putative binding protein-dependent transporter K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BADO_1679 sugar permease of ABC transporter system K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BADO_1692 ABC transporter membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BADO_0076 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BADO_0432 putative binding protein-dependent transporter K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BADO_1678 sugar permease of ABC transporter system K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BADO_1693 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BADO_1396 ABC transporter K17318 lplA; putative aldouronate transport system substrate-binding protein D BADO_1397 polysaccharide ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D BADO_1398 sugar ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D BADO_0667 ABC transporter ATP-binding protein K02069 STAR2; UDP-glucose/iron transport system permease protein D BADO_0668 ATP binding protein of ABC transporter K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D BADO_1626 sugar ABC superfamily ATP binding cassette transporter, binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BADO_1723 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BADO_0160 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BADO_0493 sugar ABC transporter solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BADO_0161 sugar transporter K02025 ABC.MS.P; multiple sugar transport system permease protein D BADO_0442 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D BADO_1627 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein D BADO_1722 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein D BADO_0077 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D BADO_0162 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D BADO_0443 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D BADO_1628 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D BADO_1721 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D BADO_0286 phosphate-binding transport protein of ABC transporter system K02040 pstS; phosphate transport system substrate-binding protein D BADO_0287 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D BADO_0288 phosphate ABC transporter phosphate-binding protein K02038 pstA; phosphate transport system permease protein D BADO_0289 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BADO_0590 glutamine ABC transporter (binding and transport protein) K10036 glnH; glutamine transport system substrate-binding protein D BADO_0591 putative amino acid ABC transporter K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D BADO_0593 glutamate-binding protein of ABC transporter system K10005 gluB; glutamate transport system substrate-binding protein D BADO_0920 Glutamate-binding protein GluB K10005 gluB; glutamate transport system substrate-binding protein D BADO_0594 permease protein of ABC transporter for glutamate K10006 gluC; glutamate transport system permease protein D BADO_0595 permease protein of ABC transporter for glutamate K10007 gluD; glutamate transport system permease protein D BADO_0592 ATP-binding protein of ABC transporter for glutamate K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D BADO_0458 solute binding protein of ABC transporter for branched-chain amino acids K01999 livK; branched-chain amino acid transport system substrate-binding protein D BADO_0062 branched-chain amino acid transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D BADO_0058 branched-chain amino acid ABC-type transport system permease components K01997 livH; branched-chain amino acid transport system permease protein D BADO_0459 permease of ABC transporter for branched-chain amino acids K01997 livH; branched-chain amino acid transport system permease protein D BADO_0460 permease of ABC transporter for branched-chain amino acids K01998 livM; branched-chain amino acid transport system permease protein D BADO_0059 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein D BADO_0461 ATP binding protein of ABC transporter for branched-chain amino acids K01995 livG; branched-chain amino acid transport system ATP-binding protein D BADO_0060 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D BADO_0061 ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BADO_0462 ATP binding protein of ABC transporter for branched-chain amino acids K01996 livF; branched-chain amino acid transport system ATP-binding protein D BADO_1049 TonB-dependent receptor K02073 metQ; D-methionine transport system substrate-binding protein D BADO_1051 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein D BADO_1050 D-methionine ABC transporter K02071 metN; D-methionine transport system ATP-binding protein D BADO_0518 solute-binding protein for glutamate_aspartate ABC transporter system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BADO_0485 ABC transporter solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BADO_0486 ABC transporter solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BADO_0487 ABC transporter solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BADO_0515 permease protein of ABC transporter system K02029 ABC.PA.P; polar amino acid transport system permease protein D BADO_0516 permease of ABC transporter system for amino acids K02029 ABC.PA.P; polar amino acid transport system permease protein D BADO_0488 permease protein of ABC transporter system K02029 ABC.PA.P; polar amino acid transport system permease protein D BADO_0489 ATP binding protein of ABC transporter K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D BADO_0517 ATP binding protein of ABC transporter for glutamate_aspartate K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D BADO_1324 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BADO_1112 ABC-type transpoter K15580 oppA; oligopeptide transport system substrate-binding protein D BADO_1111 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D BADO_1110 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D BADO_1109 dipeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BADO_0496 solute binding protein of ABC transporter systemy for peptides K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BADO_1145 solute-binding protein of ABC transporter for peptides K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BADO_1566 ABC transporter solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BADO_0497 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D BADO_1144 oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D BADO_0498 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BADO_1143 oligopeptide transport ATP-binding protein OppD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BADO_1142 ATP binding protein of ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D BADO_0499 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D BADO_0500 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D BADO_0800 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D BADO_0261 Biotin BioY-family transporter K03523 bioY; biotin transport system substrate-specific component D BADO_1012 ATP binding protein of ABC transporter K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D BADO_0783 ABC transporter permease K16926 htsT; energy-coupling factor transport system substrate-specific component D BADO_0784 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D BADO_0614 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D BADO_1004 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D BADO_0613 ABC-type cobalt transport system, ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BADO_1005 ATP binding protein of ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BADO_0785 ATP binding protein of ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BADO_1018 cobalt import ATP-binding/permease protein cbiO K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-] D BADO_0930 ABC-type cobalt transport system, permease protein K16925 ykoE; energy-coupling factor transport system permease protein D BADO_1006 ABC-type cobalt transport system, permease protein K16925 ykoE; energy-coupling factor transport system permease protein D BADO_1035 Hydroxymethylpyrimidine transport system permease protein K16925 ykoE; energy-coupling factor transport system permease protein D BADO_0290 ABC transporter solute-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D BADO_0716 ABC transporter solute-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D BADO_0714 ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D BADO_0715 ATP binding protein of ABC transporter K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D BADO_1095 ABC transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein D BADO_1094 ABC-type multidrug transport system permease component K25143 lnrM; linearmycin/streptolysin S transport system permease protein D BADO_1093 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D BADO_1173 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D BADO_0482 FtsX-like protein in cell division K09811 ftsX; cell division transport system permease protein D BADO_0481 FtsE-like ATP binding protein in cell division K09812 ftsE; cell division transport system ATP-binding protein D BADO_1522 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D BADO_1521 polysaccharide ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BADO_0086 large transmembrane protein possibly involved in transport K02004 ABC.CD.P; putative ABC transport system permease protein D BADO_0110 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D BADO_0111 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D BADO_0939 ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein D BADO_0940 ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D BADO_0617 SalY-type ABC antimicrobial peptide transport system permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BADO_0740 ABC superfamily ATP binding cassette transporter, membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D BADO_0818 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D BADO_1115 putative ABC transport system integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D BADO_1493 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D BADO_0112 ATP binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BADO_0941 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BADO_0616 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BADO_0522 ATP binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BADO_0996 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BADO_0816 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BADO_0820 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BADO_0244 ATP-binding protein of ABC transporter system K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BADO_1114 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BADO_0741 ATP binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BADO_0758 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D BADO_1097 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D BADO_0675 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D BADO_0775 putative Na -driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D BADO_1282 galactoside permease K02532 lacY; MFS transporter, OHS family, lactose permease D BADO_1427 MFS family transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D BADO_0381 AraJ-like protein K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein D BADO_1345 putative MFS transporter K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D BADO_1178 major facilitator superfamily protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D BADO_1532 major facilitator family transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D BADO_0210 major facilitator superfamily protein K06902 UMF1; MFS transporter, UMF1 family D BADO_1121 MFS superfamily transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D BADO_0174 PTS system, enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BADO_0173 Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D BADO_0372 PTS system, glucose-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D BADO_0862 membrane channel protein K06188 aqpZ; aquaporin Z D BADO_1540 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D BADO_1023 putative voltage-gated potassium channel protein K10716 kch; voltage-gated potassium channel D BADO_0124 ammonium transporter K03320 amt; ammonium transporter, Amt family D BADO_0571 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog D BADO_1671 von Willebrand factor type A (vWA) domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D BADO_0572 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog D BADO_0009 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D BADO_0921 magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D BADO_0057 CrcB family protein K06199 crcB; fluoride exporter D BADO_0781 protein crcB-like protein 2 K06199 crcB; fluoride exporter D BADO_0782 protein crcB-like protein 3 K06199 crcB; fluoride exporter D BADO_0011 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D BADO_0768 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D BADO_0090 cell surface protein K21449 ata; trimeric autotransporter adhesin D BADO_1455 FimB fimbrial subunit K21449 ata; trimeric autotransporter adhesin D BADO_1713 galactoside symporter K16209 lacS; lactose/raffinose/galactose permease D BADO_1334 galactoside symporter K16209 lacS; lactose/raffinose/galactose permease D BADO_1612 amino acid permease K16235 mmuP; S-methylmethionine transporter D BADO_1433 APC family amino acid antiporter K20265 gadC; glutamate:GABA antiporter D BADO_1166 Cobalt-zinc-cadmium resistance protein czcD K16264 czcD; cobalt-zinc-cadmium efflux system protein D BADO_0512 integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D BADO_0206 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D BADO_0016 sodium/proline symporter K11928 putP; sodium/proline symporter D BADO_0492 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D BADO_0603 Kef-type K transport systems membranecomponent K03313 nhaA; Na+:H+ antiporter, NhaA family D BADO_1684 Na/H antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D BADO_0123 Na(+)/H(+) antiporter K26730 napA; Na+:H+ antiporter D BADO_0974 Trk-type K transporters, membrane protein K03498 trkH; trk/ktr system potassium uptake protein D BADO_0975 K transporters, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D BADO_0291 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease D BADO_0055 voltage gated channel protein K03281 clcA; chloride channel protein, CIC family D BADO_1702 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family D BADO_1633 H(+)-stimulated manganese uptake system protein K03322 mntH; manganese transport protein D BADO_1735 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D BADO_0246 transporter, auxin efflux carrier domain protein K13936 mdcF; malonate transporter and related proteins D BADO_0239 auxin efflux carrier family transporter K24180 mleP; malate permease and related proteins D BADO_0998 transporter, auxin efflux carrier domain protein K24180 mleP; malate permease and related proteins D BADO_1489 potassium transport system protein kup 2 K03549 kup; KUP system potassium uptake protein D BADO_0273 L-lysine permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D BADO_0682 LIV-E family branched-chain amino acid transporter AzlC K26605 azlC; branched chain amino acid efflux pump D BADO_0683 branched-chain amino acid permease K26606 azlD; branched chain amino acid efflux pump D BADO_1019 membrane spanning protein K23675 fmnP; riboflavin transporter D BADO_1152 FtsW-like protein K03588 ftsW; cell division protein FtsW D BADO_0107 iron permease FTR1 K07243 FTR; high-affinity iron transporter D BADO_0108 Fe2 high-affinity transport protein K07230 p19; periplasmic iron binding protein D BADO_1372 lipopolysaccharide biosynthesis K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D BADO_0644 hypothetical protein K04758 feoA; ferrous iron transport protein A D BADO_0645 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D BADO_1444 hypothetical protein K25089 musI; membrane protein C 02044 Secretion system [BR:badl02044] D BADO_1200 type IV prepilin-like leader peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D BADO_0749 peptidase A24A, prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D BADO_1203 type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D BADO_1206 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D BADO_1202 type IV pilus biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC D BADO_1199 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D BADO_1198 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN D BADO_1197 type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D BADO_1207 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D BADO_0139 TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D BADO_0140 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B D BADO_1192 membrane spanning protein K02221 yggT; YggT family protein D BADO_0918 competence protein ComEA K02237 comEA; competence protein ComEA D BADO_0917 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D BADO_1072 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BADO_0254 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BADO_0886 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BADO_0348 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BADO_0219 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BADO_0122 FtsY signal recognition particle K03110 ftsY; fused signal recognition particle receptor D BADO_0855 translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BADO_1742 membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:badl02042] D BADO_0011 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D BADO_0768 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D BADO_0697 hemolysinIII-like protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:badl02022] D BADO_0284 sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BADO_0387 two-component system sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BADO_0285 response regulator of two-component system K07776 regX3; two-component system, OmpR family, response regulator RegX3 D BADO_0582 Two component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D BADO_0581 response regulator of two-component system K02483 K02483; two-component system, OmpR family, response regulator D BADO_0037 two component transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D BADO_0370 two-component response regulator K02477 K02477; two-component system, LytTR family, response regulator D BADO_0698 histidine kinase-like protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D BADO_0723 putative response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:badl02035] D BADO_1207 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D BADO_1203 type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D BADO_1206 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D BADO_1202 type IV pilus biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC D BADO_1200 type IV prepilin-like leader peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D BADO_0749 peptidase A24A, prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D BADO_1197 type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D BADO_1198 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN D BADO_1199 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D BADO_0139 TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:badl04812] D BADO_1194 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BADO_1739 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D BADO_1661 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D BADO_1123 sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D BADO_1738 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:badl04147] D BADO_0689 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BADO_1130 glyceraldehyde 3-phosphate dehydrogenase C K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BADO_0888 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BADO_0722 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BADO_1053 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D BADO_0578 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BADO_1461 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BADO_0240 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BADO_0035 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D BADO_0465 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BADO_0826 GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BADO_0545 elongation factor Tu K02358 tuf; elongation factor Tu D BADO_0765 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BADO_1167 L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BADO_0770 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_1622 long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0823 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0828 long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BADO_0349 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BADO_0856 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BADO_0983 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BADO_0984 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BADO_1395 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BADO_0711 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D BADO_0999 glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_1181 glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BADO_1460 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BADO_1162 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BADO_0860 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BADO_1001 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BADO_0674 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BADO_0887 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BADO_0922 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BADO_0384 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:badl02048] D BADO_1326 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D BADO_1332 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D BADO_1331 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA D BADO_1330 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB D BADO_1329 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC D BADO_1328 CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD D BADO_1327 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE D BADO_0661 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D BADO_1029 type I restriction-modification system R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D BADO_0658 type I restriction-modification system K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D BADO_1030 type I restriction-modification enzyme, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D BADO_0659 type I restriction system adenine methylase HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D BADO_1031 type I restriction modification system M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D BADO_0964 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BADO_1502 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BADO_1249 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D BADO_1469 RelB antitoxin domain K07473 dinJ; DNA-damage-inducible protein J D BADO_1362 putative death-on-curing family protein K07341 doc; death on curing protein D BADO_1194 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BADO_0184 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:badl04090] D BADO_0035 dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:badl01504] D BADO_1532 major facilitator family transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D BADO_0513 translation elongation factor K18220 tetM; ribosomal protection tetracycline resistance protein D BADO_0670 lysine--tRNA ligase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:badl00537] D BADO_1460 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:badl03100] D BADO_tRNA48 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BADO_tRNA45 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BADO_tRNA01 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BADO_tRNA02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BADO_tRNA30 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BADO_tRNA31 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BADO_tRNA53 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BADO_tRNA25 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BADO_tRNA52 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BADO_tRNA36 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BADO_tRNA44 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BADO_tRNA37 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BADO_tRNA20 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BADO_tRNA22 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BADO_tRNA41 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D BADO_tRNA46 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BADO_tRNA08 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BADO_tRNA07 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BADO_tRNA21 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BADO_tRNA05 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BADO_tRNA12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BADO_tRNA42 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BADO_tRNA43 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BADO_tRNA26 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BADO_tRNA29 tRNA-His K14226 tRNA-His; tRNA His D BADO_tRNA03 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BADO_tRNA24 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BADO_tRNA04 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BADO_tRNA10 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BADO_tRNA35 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BADO_tRNA33 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BADO_tRNA32 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BADO_tRNA50 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BADO_tRNA06 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BADO_tRNA15 tRNA-Met K14230 tRNA-Met; tRNA Met D BADO_tRNA51 tRNA-Met K14230 tRNA-Met; tRNA Met D BADO_tRNA23 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BADO_tRNA34 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BADO_tRNA19 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BADO_tRNA38 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BADO_tRNA18 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BADO_tRNA17 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BADO_tRNA49 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BADO_tRNA16 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BADO_tRNA14 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BADO_tRNA09 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BADO_tRNA54 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BADO_tRNA11 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D BADO_tRNA13 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BADO_tRNA28 tRNA-Val K14237 tRNA-Val; tRNA Val D BADO_tRNA40 tRNA-Val K14237 tRNA-Val; tRNA Val D BADO_tRNA27 tRNA-Val K14237 tRNA-Val; tRNA Val D BADO_tRNA39 tRNA-Val K14237 tRNA-Val; tRNA Val D BADO_tRNA47 tRNA-Val K14237 tRNA-Val; tRNA Val D BADO_1rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_4rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_3rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_2rRNA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BADO_1rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_4rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_2rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_3rRNA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BADO_1rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_3rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_4rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_2rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BADO_5rRNA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D BADO_1211 aldo/keto reductase family K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D BADO_1632 2,5-diketo-D-gluconate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D BADO_0928 Oxidoreductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D BADO_0958 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D BADO_0047 glutamate synthase subunit beta K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D BADO_1654 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D BADO_1043 pyruvate formate-lyase 1 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D BADO_1098 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D BADO_0436 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D BADO_0841 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D BADO_0106 ApbE family thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D BADO_0806 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D BADO_1221 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D BADO_0072 sialic acid-specific 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D BADO_0434 secreted protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D BADO_1510 Sialic acid-specific 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D BADO_0311 putative carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D BADO_0435 putative esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D BADO_0924 phosphoglycerate mutase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D BADO_1317 PHP family metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D BADO_0802 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D BADO_1488 TatD-like deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D BADO_1606 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D BADO_0309 xylanase Y K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156] D BADO_0444 hypothetical protein K18205 hypBA1; non-reducing end beta-L-arabinofuranosidase [EC:3.2.1.185] D BADO_1694 hypothetical protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225] D BADO_1432 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BADO_0422 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BADO_0829 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BADO_1034 carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D BADO_1415 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D BADO_0575 ATPase, AAA family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D BADO_0385 myosin-cross-reactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53] D BADO_0819 carbohydrate kinase superfamily protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D BADO_0695 peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D BADO_0084 N-acylglucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D BADO_1137 ATP-grasp superfamily protein K17810 asl; D-aspartate ligase [EC:6.3.1.12] D BADO_1687 calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D BADO_1103 cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D BADO_0760 NifU family SUF system FeS assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D BADO_1544 putative alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D BADO_1377 secreted protein K21688 rpfB; resuscitation-promoting factor RpfB D BADO_0567 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D BADO_0131 ABC1 family protein K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism C 99999 Others D BADO_1685 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D BADO_0583 cold shock protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D BADO_1040 trigger factor PPIase K03545 tig; trigger factor D BADO_0484 SsrA-binding protein K03664 smpB; SsrA-binding protein D BADO_0118 glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH D BADO_0608 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D BADO_1552 putative DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D BADO_0609 endonuclease K07460 yraN; putative endonuclease D BADO_0607 hypothetical protein K04096 smf; DNA processing protein D BADO_0598 recombination factor protein RarA K07478 ycaJ; putative ATPase D BADO_1069 transposase, IS3 K07483 K07483; transposase D BADO_1353 transposase, IS256 K07493 K07493; putative transposase D BADO_1508 transposase, IS256 family K07493 K07493; putative transposase D BADO_1647 transposase, IS256 family K07493 K07493; putative transposase D BADO_1070 transposase, IS3 K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D BADO_0097 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D BADO_0085 aromatic amino acid transport protein AroP K03293 TC.AAT; amino acid transporter, AAT family D BADO_0507 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D BADO_0305 APC family amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D BADO_0541 Na dependent nucleoside transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D BADO_0404 spore coat protein H K06330 cotH; spore coat protein H D BADO_1741 R3H domain-containing protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D BADO_1120 GTP-binding elongation factor TypA/BipA K06207 typA; GTP-binding protein D BADO_1402 hypothetical protein K07166 K07166; ACT domain-containing protein D BADO_0766 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D BADO_1217 lysin K07273 acm; lysozyme C 99994 Others D BADO_0386 response regulator of two-component system K02039 phoU; phosphate transport system protein D BADO_0943 hypothetical protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D BADO_1452 haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D BADO_0756 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D BADO_0757 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D BADO_0269 LemA-like protein K03744 lemA; LemA protein D BADO_1472 DedA integral membrane protein K03975 dedA; membrane-associated protein D BADO_0051 putative membrane protein K01421 yhgE; putative membrane protein D BADO_0052 YhgE/Pip domain protein K01421 yhgE; putative membrane protein D BADO_0115 putative phage infection protein K01421 yhgE; putative membrane protein D BADO_0116 putative phage infection protein K01421 yhgE; putative membrane protein C 99997 Function unknown D BADO_0789 alpha/beta hydrolase K06889 K06889; uncharacterized protein D BADO_1086 hypothetical protein K06890 K06890; uncharacterized protein D BADO_0982 Hydrolase (HAD superfamily) K06950 K06950; uncharacterized protein D BADO_1491 HD domain protein K06950 K06950; uncharacterized protein D BADO_0216 putative RNA-binding protein K06960 K06960; uncharacterized protein D BADO_0967 putative flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein D BADO_1148 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein D BADO_0652 hypothetical protein K07090 K07090; uncharacterized protein D BADO_1459 sulfite exporter TauE/SafE domain protein K07090 K07090; uncharacterized protein D BADO_0676 short chain dehydrogenase/reductase family oxidoreductase K07124 K07124; uncharacterized protein D BADO_1471 ATPase K07133 K07133; uncharacterized protein D BADO_0649 Fe-S center protein K07138 K07138; uncharacterized protein D BADO_1743 hypothetical protein K08998 K08998; uncharacterized protein D BADO_0691 hypothetical protein K09009 K09009; uncharacterized protein D BADO_1052 YqeY family protein K09117 K09117; uncharacterized protein D BADO_0685 hypothetical protein K09118 K09118; uncharacterized protein D BADO_1403 putative glycerol-3-phosphate dehydrogenase family K09157 K09157; uncharacterized protein D BADO_1483 hypothetical protein K09955 K09955; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024