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Transcription Machinery - Bacillus velezensis AS43.3
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E B938_00730 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E B938_00550 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E B938_00555 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E B938_17610 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
E B938_08060 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E B938_12140 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
E B938_00915 RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E B938_10975 RNA polymerase sigma factor SigX K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E B938_03040 ECF subfamily RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E B938_04670 RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E B938_02300 RNA polymerase sigma factor SigB K03090 sigB; RNA polymerase sigma-B factor
E B938_07865 sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E B938_07870 sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E B938_12425 sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E B938_11145 sporulation sigma factor SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E B938_00505 RNA polymerase factor sigma-70 K27000 sigH; RNA polymerase sigma-H factor
E B938_06870 RNA polymerase sigma factor SigI K03093 sigI; RNA polymerase sigma-I factor
E B938_15545 hypothetical protein K26992 sigO; RNA polymerase sigma-O factor
E B938_16150 SigL K03092 rpoN; RNA polymerase sigma-54 factor
E B938_08465 RNA polymerase sigma factor SigD K02405 fliA; RNA polymerase sigma factor FliA
E B938_06425 positive control sigma-like factor K24072 xpf; positive control factor
E B938_05970 positive control sigma-like factor K24072 xpf; positive control factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E B938_08530 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E B938_11715 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
E B938_11415 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
E B938_00520 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
E B938_02280 RsbT K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E B938_02275 antagonist of RsbT K17762 rsbS; rsbT antagonist protein RsbS
E B938_03460 hypothetical protein K17763 rsbR; rsbT co-antagonist protein RsbR
E B938_06780 hypothetical protein K17763 rsbR; rsbT co-antagonist protein RsbR
E B938_09950 hypothetical protein K17763 rsbR; rsbT co-antagonist protein RsbR
E B938_11935 hypothetical protein K17763 rsbR; rsbT co-antagonist protein RsbR
E B938_02270 Modulator protein K17763 rsbR; rsbT co-antagonist protein RsbR
E B938_02285 hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E B938_02305 negative regulator of sigma-B (phosphoserine phosphatase) K05518 rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3]
E B938_02290 anti-sigma B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E B938_02295 serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
E B938_12620 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E B938_17565 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024