+D GENES KO
#
KEGG Orthology (KO) - Bartonella ancashensis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:banc00010]
D PU02_0007 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PU02_0905 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PU02_0321 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PU02_1131 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PU02_0323 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PU02_0322 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PU02_0711 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PU02_1127 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PU02_1229 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PU02_1124 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PU02_1123 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PU02_1122 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PU02_0355 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PU02_0182 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:banc00020]
D PU02_1069 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D PU02_0556 Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PU02_0904 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PU02_0432 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PU02_0431 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0433 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PU02_0434 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PU02_0367 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PU02_0366 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PU02_0369 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PU02_0368 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PU02_0181 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PU02_0435 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PU02_1124 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PU02_1123 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PU02_1122 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:banc00030]
D PU02_0007 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PU02_0931 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PU02_0324 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PU02_0350 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PU02_1066 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PU02_0182 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PU02_0762 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PU02_0321 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PU02_0905 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:banc00040]
D PU02_1315 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PU02_0931 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:banc00051]
D PU02_0905 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PU02_0321 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PU02_1131 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:banc00052]
D PU02_1315 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PU02_0182 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:banc00500]
D PU02_1315 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PU02_0182 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PU02_0007 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:banc00520]
D PU02_1142 Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PU02_0914 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PU02_0294 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PU02_0913 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PU02_0480 ATPase YjeE, predicted to have essential role in cell wall biosynthesis K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D PU02_0273 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PU02_0808 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PU02_0182 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PU02_1315 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PU02_0007 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:banc00620]
D PU02_0355 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PU02_1124 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PU02_1123 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PU02_1122 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0419 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PU02_1024 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PU02_1025 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PU02_0484 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PU02_0770 Zn-dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PU02_0539 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PU02_1050 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PU02_0435 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PU02_0181 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PU02_1229 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:banc00630]
D PU02_0355 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PU02_0435 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PU02_1069 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D PU02_0556 Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PU02_0017 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_0894 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_1042 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PU02_0109 Glycine dehydrogenase (decarboxylating) (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PU02_0111 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0110 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:banc00640]
D PU02_0355 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0419 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PU02_1024 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PU02_1025 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PU02_0484 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PU02_0434 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PU02_0433 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism
D PU02_0367 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PU02_0366 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PU02_0369 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PU02_0368 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
C 00660 C5-Branched dibasic acid metabolism
D PU02_0434 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PU02_0433 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:banc00562]
D PU02_0652 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PU02_0304 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PU02_1131 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:banc00190]
D PU02_1008 NADH ubiquinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PU02_1007 NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PU02_1006 NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PU02_1004 NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PU02_1003 NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PU02_1002 NADH-ubiquinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PU02_1001 NADH-ubiquinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PU02_1000 NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PU02_0999 NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PU02_0998 NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PU02_0997 NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PU02_0996 NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PU02_0995 NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PU02_0994 NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PU02_0367 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PU02_0366 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PU02_0369 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PU02_0368 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PU02_1241 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D PU02_0565 Cytochrome O ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D PU02_1044 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D PU02_0564 Cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D PU02_0563 Cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D PU02_0562 Cytochrome O ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D PU02_0600 membrane c-type cytochrome cy K08738 CYC; cytochrome c
D PU02_0346 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PU02_0344 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PU02_0345 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PU02_0347 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PU02_0343 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PU02_1271 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PU02_1268 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PU02_1269 ATP synthase B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PU02_1270 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PU02_1322 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:banc00710]
D PU02_0322 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PU02_0323 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PU02_0321 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PU02_0905 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PU02_0324 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PU02_1066 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PU02_1131 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PU02_0931 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PU02_0350 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PU02_1229 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PU02_0539 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PU02_1050 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PU02_0435 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:banc00720]
D PU02_1229 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PU02_0435 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PU02_0181 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PU02_0367 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PU02_0366 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PU02_0369 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PU02_0368 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PU02_0433 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PU02_0434 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PU02_0904 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PU02_0556 Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PU02_0419 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PU02_1024 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PU02_1025 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PU02_0484 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PU02_0015 Methylenetetrahydrofolate dehydrogenase [NADP+] K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PU02_0355 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:banc00680]
D PU02_1042 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PU02_1127 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PU02_0435 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PU02_0321 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PU02_0905 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PU02_0355 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PU02_0711 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PU02_0027 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:banc00910]
D PU02_0394 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PU02_0017 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_0894 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_0393 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:banc00061]
D PU02_0419 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PU02_1024 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PU02_1025 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PU02_0484 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PU02_1160 Acyl carrier protein K02078 acpP; acyl carrier protein
D PU02_1162 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PU02_1033 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PU02_0567 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PU02_1052 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PU02_1053 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PU02_1159 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PU02_1161 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PU02_0568 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PU02_1076 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PU02_1250 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PU02_0566 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:banc00561]
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PU02_1034 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PU02_0944 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PU02_0415 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:banc00564]
D PU02_0185 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PU02_0099 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PU02_0944 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PU02_0415 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PU02_1305 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PU02_1080 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PU02_0969 Phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D PU02_1175 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PU02_1176 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PU02_1145 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:banc00230]
D PU02_0182 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PU02_0762 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PU02_1173 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PU02_1254 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PU02_1021 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PU02_0925 Phosphoribosylformylglycinamidine synthase, synthetase subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PU02_0927 Phosphoribosylformylglycinamidine synthase, PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PU02_0926 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PU02_1020 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PU02_0268 Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PU02_0267 Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PU02_0928 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PU02_0930 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PU02_0384 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PU02_0763 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PU02_1310 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PU02_1146 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PU02_0501 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PU02_1307 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PU02_1157 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PU02_1295 Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PU02_1294 Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PU02_0909 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PU02_1190 GTP pyrophosphokinase, (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PU02_0026 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PU02_0272 Phosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PU02_0881 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:banc00240]
D PU02_0784 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PU02_0786 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PU02_0946 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PU02_1179 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PU02_0945 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PU02_0018 Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PU02_1189 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PU02_0720 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PU02_1082 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PU02_1146 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PU02_0453 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PU02_0265 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PU02_1129 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PU02_0535 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PU02_0272 Phosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PU02_0659 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PU02_1295 Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PU02_1294 Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PU02_0964 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PU02_0288 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PU02_0827 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:banc00250]
D PU02_0780 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PU02_0473 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PU02_0406 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PU02_0026 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PU02_0930 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PU02_0946 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PU02_0394 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PU02_0017 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_0894 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_0784 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PU02_0786 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PU02_0926 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PU02_0914 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PU02_1173 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:banc00260]
D PU02_1281 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PU02_0113 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PU02_1042 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PU02_0711 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PU02_0027 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PU02_0109 Glycine dehydrogenase (decarboxylating) (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PU02_0111 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0110 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PU02_1175 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PU02_1093 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:banc00270]
D PU02_0586 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PU02_0763 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PU02_1281 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PU02_0113 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PU02_0906 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PU02_0011 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PU02_0604 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PU02_0780 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PU02_0435 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PU02_1093 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PU02_0027 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:banc00280]
D PU02_0906 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:banc00290]
D PU02_0837 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PU02_0906 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:banc00300]
D PU02_1281 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PU02_0113 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PU02_1194 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PU02_0712 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PU02_0513 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PU02_0548 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PU02_0499 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PU02_0439 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PU02_0404 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PU02_0801 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PU02_0802 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:banc00310]
D PU02_0431 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:banc00220]
D PU02_0547 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PU02_0473 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PU02_0406 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PU02_0926 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PU02_0017 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_0894 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_0784 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PU02_0786 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PU02_0394 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PU02_0780 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PU02_1288 Glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PU02_0509 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PU02_1043 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PU02_0548 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:banc00330]
D PU02_0103 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PU02_0428 Carboxynorspermidine decarboxylase, putative K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PU02_0016 Oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PU02_0723 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PU02_1333 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PU02_1332 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PU02_0780 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism
D PU02_0780 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00360 Phenylalanine metabolism
D PU02_0780 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00380 Tryptophan metabolism [PATH:banc00380]
D PU02_0431 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:banc00400]
D PU02_0780 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:banc00410]
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PU02_1182 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
D PU02_0394 NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D PU02_0968 Metal-dependent hydrolases of the beta-lactamase superfamily I K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:banc00450]
D PU02_0973 Cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PU02_0778 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PU02_0966 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D PU02_1042 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:banc00470]
D PU02_0107 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PU02_0810 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PU02_0926 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PU02_0959 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PU02_0804 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PU02_0439 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PU02_0404 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:banc00480]
D PU02_0011 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PU02_0604 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PU02_0572 Peptidase B K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PU02_1213 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PU02_0713 Glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PU02_1064 Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PU02_0904 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PU02_0103 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:banc00540]
D PU02_1075 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PU02_0814 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PU02_1077 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PU02_1074 UDP-2,3-diacylglucosamine pyrophosphatase K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PU02_1073 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PU02_0656 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PU02_1314 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PU02_1128 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PU02_0599 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PU02_0655 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PU02_1055 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:banc00541]
D PU02_1315 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PU02_0913 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:banc00550]
D PU02_0273 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PU02_0808 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PU02_0807 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PU02_0804 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PU02_0801 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PU02_0810 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PU02_0802 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PU02_1163 Putative permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PU02_0803 Phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PU02_0806 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PU02_0340 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PU02_0982 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PU02_0800 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:banc00552]
D PU02_1163 Putative permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:banc00730]
D PU02_1206 Hydroxymethylpyrimidine phosphate synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PU02_1211 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PU02_0977 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PU02_1207 Glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PU02_1247 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PU02_1209 Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PU02_0307 Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PU02_1210 Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PU02_0331 Thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D PU02_0881 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:banc00740]
D PU02_1249 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PU02_1040 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PU02_1038 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PU02_1039 Riboflavin synthase eubacterial/eukaryotic K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PU02_0174 Riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:banc00750]
D PU02_1252 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PU02_0027 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PU02_1155 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PU02_0836 Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:banc00760]
D PU02_0531 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PU02_1331 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PU02_1063 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PU02_0796 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PU02_1060 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:banc00770]
D PU02_0837 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PU02_1181 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PU02_1182 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PU02_0573 Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D PU02_0487 Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PU02_0898 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PU02_0454 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PU02_1187 Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PU02_0906 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:banc00780]
D PU02_0567 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PU02_1052 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PU02_1053 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PU02_1159 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PU02_1161 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PU02_1076 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PU02_1250 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PU02_0566 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PU02_0993 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:banc00785]
D PU02_1011 Octanoate-[acyl-carrier-protein]-protein-N-octan oyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PU02_1120 Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_1124 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PU02_1123 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PU02_1122 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PU02_0432 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PU02_0431 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PU02_0109 Glycine dehydrogenase (decarboxylating) (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PU02_0111 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PU02_0110 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:banc00790]
D PU02_1027 GTP cyclohydrolase I type 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PU02_0828 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PU02_0483 Dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PU02_1249 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
C 00670 One carbon pool by folate [PATH:banc00670]
D PU02_0828 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PU02_0015 Methylenetetrahydrofolate dehydrogenase [NADP+] K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PU02_1042 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PU02_1021 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PU02_0384 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PU02_0516 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PU02_0111 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PU02_0827 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PU02_0271 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:banc00860]
D PU02_1062 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PU02_1068 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PU02_1241 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D PU02_1044 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D PU02_0378 Aerobic cobaltochelatase CobS subunit K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D PU02_0379 Aerobic cobaltochelatase CobT subunit K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D PU02_0932 4-hydroxyphenylacetate 3-monooxygenase, reductase component K13786 cobR; cob(II)yrinic acid a,c-diamide reductase [EC:1.16.8.-]
D PU02_0937 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:banc00130]
D PU02_1253 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PU02_1282 3-demethylubiquinol 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PU02_0970 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PU02_0365 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PU02_0489 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:banc00900]
D PU02_1247 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PU02_1118 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D PU02_1260 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PU02_0342 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PU02_1240 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PU02_0341 Octaprenyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PU02_1264 Decaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:banc00906]
D PU02_1133 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PU02_0324 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:banc00332]
D PU02_1333 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PU02_1332 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:banc00261]
D PU02_1281 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PU02_0113 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PU02_1194 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PU02_0712 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:banc00521]
D PU02_0182 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PU02_0652 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PU02_0304 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
D PU02_0780 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D PU02_1162 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PU02_1161 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PU02_1250 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PU02_0566 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PU02_1160 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D PU02_0586 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:banc00625]
D PU02_0022 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:banc03020]
D PU02_1097 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PU02_1096 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PU02_0884 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PU02_1191 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:banc03010]
D PU02_0534 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D PU02_1085 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D PU02_0866 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D PU02_0960 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D PU02_0877 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D PU02_1165 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D PU02_0856 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D PU02_0874 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D PU02_1015 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D PU02_0859 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D PU02_0883 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D PU02_0855 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D PU02_0882 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D PU02_0873 SSU ribosomal protein S14p (S29e), zinc-independent K02954 RP-S14; small subunit ribosomal protein S14
D PU02_0577 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D PU02_0390 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D PU02_0869 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D PU02_1166 SSU ribosomal protein S18p, zinc-independent K02963 RP-S18; small subunit ribosomal protein S18
D PU02_0864 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D PU02_0557 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D PU02_0010 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D PU02_1100 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D PU02_0863 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D PU02_0860 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D PU02_0861 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D PU02_0872 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D PU02_0875 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D PU02_1098 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D PU02_1168 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D PU02_1099 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D PU02_1101 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D PU02_1014 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D PU02_0870 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D PU02_0879 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D PU02_0867 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D PU02_0885 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D PU02_0876 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D PU02_0371 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D PU02_0523 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D PU02_0006 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D PU02_0865 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D PU02_0862 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D PU02_0871 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D PU02_0761 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D PU02_0005 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D PU02_0381 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D PU02_0868 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D PU02_0878 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D PU02_0301 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D PU02_0339 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D PU02_0940 LSU ribosomal protein L33p, zinc-independent K02913 RP-L33; large subunit ribosomal protein L33
D PU02_0717 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D PU02_0522 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D PU02_0269 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D PU02_1364 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PU02_1357 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PU02_1354 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PU02_1361 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PU02_1353 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PU02_1360 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:banc00970]
D PU02_1355 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PU02_1362 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PU02_1368 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PU02_1349 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PU02_1382 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PU02_1388 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PU02_1375 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PU02_1380 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PU02_1376 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PU02_1394 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PU02_1358 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PU02_1377 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PU02_1367 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PU02_1390 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PU02_1350 tRNA-His K14226 tRNA-His; tRNA His
D PU02_1356 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PU02_1363 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PU02_1366 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PU02_1374 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PU02_1385 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PU02_1370 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PU02_1392 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PU02_1378 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PU02_1373 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PU02_1352 tRNA-Met K14230 tRNA-Met; tRNA Met
D PU02_1359 tRNA-Met K14230 tRNA-Met; tRNA Met
D PU02_1371 tRNA-Met K14230 tRNA-Met; tRNA Met
D PU02_1372 tRNA-Met K14230 tRNA-Met; tRNA Met
D PU02_1351 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PU02_1386 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PU02_1383 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PU02_1379 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PU02_1347 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PU02_1348 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PU02_1393 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PU02_1384 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PU02_1365 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PU02_1369 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PU02_1389 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PU02_1391 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PU02_1387 tRNA-Val K14237 tRNA-Val; tRNA Val
D PU02_1381 tRNA-Val K14237 tRNA-Val; tRNA Val
D PU02_1062 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PU02_1068 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PU02_0950 Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PU02_1108 Aspartyl-tRNA(Asn) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PU02_0949 Aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PU02_0889 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PU02_0920 Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PU02_1266 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PU02_1267 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PU02_1030 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PU02_1138 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PU02_1178 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PU02_0966 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PU02_0516 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PU02_0849 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PU02_0352 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PU02_0647 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PU02_0475 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PU02_0908 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PU02_0991 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PU02_0184 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PU02_0524 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PU02_0525 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PU02_0979 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PU02_0177 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:banc03060]
D PU02_0880 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D PU02_1103 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PU02_1130 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PU02_0841 Protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D PU02_1135 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PU02_0715 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PU02_1290 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PU02_0541 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D PU02_0392 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PU02_0441 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D PU02_1141 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PU02_1140 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PU02_1139 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D PU02_1186 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PU02_0458 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:banc04122]
D PU02_0977 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PU02_0747 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PU02_1208 Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:banc03018]
D PU02_1326 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PU02_0984 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PU02_1127 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PU02_0576 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PU02_0843 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PU02_0941 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PU02_0451 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PU02_0992 Metallo-beta-lactamase family protein, RNA-specific K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PU02_0507 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PU02_0179 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PU02_1046 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PU02_0756 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:banc03030]
D PU02_0455 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PU02_0916 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PU02_0598 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PU02_0965 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PU02_0410 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PU02_1150 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PU02_0560 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PU02_1169 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PU02_0789 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PU02_0693 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0896 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0620 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0085 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_1239 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PU02_1258 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PU02_0456 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PU02_0817 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:banc03410]
D PU02_0521 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PU02_1232 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PU02_0640 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PU02_0732 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PU02_1192 Uracil-DNA glycosylase, family 5 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PU02_1212 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PU02_0854 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PU02_0362 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PU02_0456 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PU02_1013 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PU02_0817 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:banc03420]
D PU02_0987 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PU02_0895 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PU02_0774 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PU02_1144 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PU02_0821 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PU02_0456 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PU02_0817 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:banc03430]
D PU02_0538 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PU02_0658 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PU02_0821 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PU02_0731 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PU02_1248 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PU02_1013 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PU02_0693 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0896 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0620 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0085 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0916 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PU02_0560 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PU02_0598 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PU02_0410 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PU02_0965 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PU02_0455 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PU02_1150 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PU02_0817 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:banc03440]
D PU02_1013 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PU02_0693 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0896 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0620 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0085 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0561 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PU02_1183 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PU02_0596 Recombination protein RecR K06187 recR; recombination protein RecR
D PU02_0888 RecA protein K03553 recA; recombination protein RecA
D PU02_0456 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PU02_0311 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PU02_0312 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PU02_0310 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PU02_0915 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PU02_0916 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PU02_0560 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PU02_0598 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PU02_0410 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PU02_0965 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PU02_0455 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PU02_1150 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PU02_0349 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:banc02010]
D PU02_1301 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PU02_1302 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PU02_1303 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PU02_1304 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PU02_0634 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PU02_0635 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D PU02_0636 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D PU02_0637 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PU02_0853 Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PU02_0851 Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D PU02_0852 Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D PU02_0850 Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PU02_0114 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PU02_0116 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D PU02_0115 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PU02_0601 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D PU02_0602 Oligopeptide transport system permease protein OppC K13895 yejE; microcin C transport system permease protein
D PU02_0603 Oligopeptide transport system permease protein OppB K13896 yejF; microcin C transport system ATP-binding protein
D PU02_0526 Manganese ABC transporter, periplasmic-binding protein SitA K11604 sitA; manganese/iron transport system substrate-binding protein
D PU02_0528 Manganese ABC transporter, inner membrane permease protein SitC K11605 sitC; manganese/iron transport system permease protein
D PU02_0529 Manganese ABC transporter, inner membrane permease protein SitD K11606 sitD; manganese/iron transport system permease protein
D PU02_0527 Manganese ABC transporter, ATP-binding protein SitB K11607 sitB; manganese/iron transport system ATP-binding protein
D PU02_0665 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D PU02_0664 Transmembrane component BioN of energizing module of biotin ECF transporter K16783 bioN; biotin transport system permease protein
D PU02_0662 ATPase component BioM of energizing module of biotin ECF transporter K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D PU02_0990 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D PU02_0989 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PU02_0552 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D PU02_0553 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D PU02_0554 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PU02_1151 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D PU02_1152 Permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D PU02_0466 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PU02_0357 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PU02_0356 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PU02_0494 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PU02_1177 Lipid A export ATP-binding/permease protein MsbA K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D PU02_0360 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:banc02060]
D PU02_0003 Phosphoenolpyruvate-protein phosphotransferase of PTS system K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D PU02_0468 PTS system nitrogen-specific IIA component, PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:banc03070]
D PU02_0847 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D PU02_0841 Protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D PU02_1103 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PU02_1130 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PU02_0880 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D PU02_1135 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PU02_0715 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PU02_1290 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PU02_0441 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D PU02_0541 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D PU02_0392 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PU02_1141 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PU02_1140 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PU02_1139 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D PU02_0187 Major pilus subunit of type IV secretion complex (VirB2) K03197 virB2; type IV secretion system protein VirB2
D PU02_0188 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) K03198 virB3; type IV secretion system protein VirB3
D PU02_0192 Lipoprotein of type IV secretion complex that spans outer membrane and periplasm, VirB7 K03202 virB7; type IV secretion system protein VirB7
D PU02_0194 Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9) K03204 virB9; type IV secretion system protein VirB9
D PU02_0191 Integral inner membrane protein of type IV secretion complex (VirB6) K03201 virB6; type IV secretion system protein VirB6
D PU02_0193 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8) K03203 virB8; type IV secretion system protein VirB8
D PU02_0195 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) K03195 virB10; type IV secretion system protein VirB10
D PU02_0189 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D PU02_0196 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11) K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D PU02_0199 Type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:banc02020]
D PU02_0634 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PU02_0768 Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PU02_0769 DNA-binding response regulator PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PU02_0831 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PU02_1217 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PU02_0724 Flagellin protein FlaA K02406 fliC; flagellin
D PU02_0160 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D PU02_1044 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D PU02_0559 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PU02_0504 Sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PU02_0505 DNA-binding response regulator ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D PU02_0017 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_0894 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_1117 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PU02_1116 Nitrogen regulation protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D PU02_1214 Two-component sensor histidine kinase PleC K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D PU02_1016 Response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D PU02_0935 Sensor histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PU02_0743 Signal transduction histidine kinase K13588 chpT; histidine phosphotransferase ChpT
D PU02_0744 Cell cycle transcriptional regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D PU02_1059 Response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D PU02_0850 Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PU02_0851 Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D PU02_0852 Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D PU02_0853 Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PU02_0600 membrane c-type cytochrome cy K08738 CYC; cytochrome c
D PU02_0847 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D PU02_0103 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:banc02024]
D PU02_1046 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PU02_0100 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PU02_1040 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PU02_0986 ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PU02_0733 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PU02_0734 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PU02_0735 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PU02_0736 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PU02_0737 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PU02_0738 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PU02_0715 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PU02_0841 Protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D PU02_1103 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PU02_1130 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PU02_0880 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D PU02_1135 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PU02_1290 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PU02_0441 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D PU02_0541 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D PU02_0392 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:banc02030]
D PU02_0164 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PU02_0161 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PU02_0163 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PU02_0160 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D PU02_0141 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:banc02040]
D PU02_0154 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PU02_0143 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D PU02_0164 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PU02_0157 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PU02_0148 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D PU02_0161 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PU02_0163 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PU02_0147 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PU02_0130 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PU02_0171 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PU02_0172 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PU02_0165 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PU02_0152 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PU02_0156 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PU02_0155 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PU02_0131 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D PU02_0136 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PU02_0158 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PU02_0153 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PU02_0149 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D PU02_0151 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D PU02_0169 Flagellar protein FlgJ (peptidoglycan hydrolase) K02395 flgJ; peptidoglycan hydrolase FlgJ
D PU02_0135 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PU02_0134 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D PU02_0724 Flagellin protein FlaA K02406 fliC; flagellin
D PU02_0160 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D PU02_0141 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D PU02_0140 Chemotaxis protein motC K10564 motC; chemotaxis protein MotC
D PU02_0139 hypothetical protein K10565 motD; chemotaxis protein MotD
D PU02_0790 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PU02_1127 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:banc01501]
D PU02_1142 Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PU02_0847 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D PU02_0982 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PU02_0800 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:banc01502]
D PU02_0810 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PU02_0107 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PU02_0802 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PU02_0803 Phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PU02_0806 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:banc01503]
D PU02_0983 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PU02_0831 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PU02_1217 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PU02_0847 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D PU02_1075 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:banc01000]
C 01001 Protein kinases [BR:banc01001]
D PU02_0768 Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PU02_0504 Sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PU02_1117 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PU02_1214 Two-component sensor histidine kinase PleC K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D PU02_0935 Sensor histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins
C 01002 Peptidases and inhibitors [BR:banc01002]
D PU02_0458 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PU02_1307 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PU02_1173 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PU02_0914 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PU02_1213 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PU02_1319 Dipeptidyl carboxypeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PU02_0572 Peptidase B K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PU02_0499 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PU02_0957 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PU02_0818 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PU02_0639 Aminopeptidase S (Leu, Val, Phe, Tyr preference) K19689 ampS; aminopeptidase [EC:3.4.11.-]
D PU02_0296 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PU02_0387 Protease htpX-like K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PU02_1079 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PU02_0831 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PU02_1217 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PU02_1227 Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PU02_1114 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PU02_1112 ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PU02_0615 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D PU02_0681 putative transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D PU02_1186 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PU02_1327 Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PU02_0574 ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PU02_0651 TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex K03592 pmbA; PmbA protein
D PU02_1244 TldD protein, part of proposed TldE/TldD proteolytic complex K03568 tldD; TldD protein
D PU02_0830 HflC protein K04087 hflC; modulator of FtsH protease HflC
D PU02_0829 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:banc01003]
D PU02_0340 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PU02_0982 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PU02_0532 Cyclic beta-1,2-glucan synthase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:banc01005]
D PU02_1075 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PU02_1073 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PU02_0814 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PU02_1077 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PU02_1074 UDP-2,3-diacylglucosamine pyrophosphatase K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PU02_0656 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PU02_1055 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PU02_0655 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PU02_1128 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PU02_0599 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PU02_1314 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PU02_0776 Glycosyltransferase K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:banc01011]
D PU02_0273 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PU02_0808 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PU02_0807 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PU02_0804 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PU02_0801 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PU02_0810 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PU02_0107 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PU02_0959 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PU02_0803 Phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PU02_0806 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PU02_1163 Putative permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PU02_0176 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D PU02_0982 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PU02_0800 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PU02_0340 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PU02_1195 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PU02_1316 Membrane-bound lytic murein transglycosylase B precursor K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PU02_1158 protein YceG like K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PU02_0963 Rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PU02_0983 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:banc01004]
D PU02_1162 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PU02_1033 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PU02_0567 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PU02_1052 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PU02_1053 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PU02_1159 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PU02_1161 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PU02_0568 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PU02_1076 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PU02_1250 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PU02_0566 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PU02_0355 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PU02_1034 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PU02_0944 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PU02_0415 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:banc01006]
D PU02_0341 Octaprenyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PU02_1264 Decaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PU02_1133 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PU02_0833 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PU02_1253 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PU02_1241 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:banc01007]
D PU02_0475 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PU02_1062 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PU02_1068 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PU02_0979 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PU02_0177 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PU02_1178 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PU02_0908 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PU02_0966 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PU02_0647 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PU02_0849 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PU02_0352 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PU02_0920 Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PU02_0184 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PU02_1266 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PU02_1267 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PU02_1138 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PU02_0991 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PU02_1030 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PU02_0889 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PU02_0524 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PU02_0525 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PU02_0780 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PU02_0548 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PU02_0906 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PU02_0027 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:banc00194]
D PU02_0343 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PU02_0344 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PU02_0345 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PU02_0346 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PU02_0347 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PU02_1268 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PU02_1269 ATP synthase B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PU02_1270 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PU02_1271 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PU02_1272 ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:banc03000]
D PU02_0938 Transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PU02_1291 Manganese uptake regulation protein MUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PU02_0100 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PU02_0569 Iron-responsive regulator Irr K09826 irr; Fur family transcriptional regulator, iron response regulator
D PU02_0993 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PU02_0611 hypothetical protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D PU02_0676 hypothetical protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D PU02_0067 putative prophage protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PU02_0702 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D PU02_0625 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D PU02_0376 Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D PU02_0446 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PU02_0336 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D PU02_0502 Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D PU02_1237 UPF0301 protein YqgE K07735 algH; putative transcriptional regulator
D PU02_0933 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D PU02_1041 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:banc03021]
D PU02_0884 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PU02_1097 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PU02_1096 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PU02_1191 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PU02_0790 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PU02_0024 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D PU02_0333 RNA polymerase sigma factor RpoH-related protein K03089 rpoH; RNA polymerase sigma-32 factor
D PU02_0583 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D PU02_1037 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D PU02_1102 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PU02_0933 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D PU02_0775 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PU02_0451 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:banc03019]
D PU02_0984 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PU02_1185 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PU02_0992 Metallo-beta-lactamase family protein, RNA-specific K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PU02_0941 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PU02_0843 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PU02_1127 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PU02_0576 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PU02_0451 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PU02_0507 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PU02_0179 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PU02_1046 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PU02_0756 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PU02_1326 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
C 03041 Spliceosome
C 03011 Ribosome [BR:banc03011]
D PU02_0534 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D PU02_1085 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D PU02_0866 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D PU02_0960 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D PU02_0877 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D PU02_1165 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D PU02_0856 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D PU02_0874 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D PU02_1015 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D PU02_0859 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D PU02_0883 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D PU02_0855 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D PU02_0882 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D PU02_0873 SSU ribosomal protein S14p (S29e), zinc-independent K02954 RP-S14; small subunit ribosomal protein S14
D PU02_0577 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D PU02_0390 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D PU02_0869 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D PU02_1166 SSU ribosomal protein S18p, zinc-independent K02963 RP-S18; small subunit ribosomal protein S18
D PU02_0864 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D PU02_0557 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D PU02_0010 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D PU02_1100 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D PU02_0863 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D PU02_0860 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D PU02_0861 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D PU02_0872 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D PU02_0875 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D PU02_1168 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D PU02_1099 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D PU02_1101 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D PU02_1098 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D PU02_1014 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D PU02_0870 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D PU02_0879 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D PU02_0867 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D PU02_0885 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D PU02_0876 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D PU02_0371 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D PU02_0523 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D PU02_0006 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D PU02_0865 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D PU02_0862 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D PU02_0871 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D PU02_0005 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D PU02_0381 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D PU02_0868 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D PU02_0878 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D PU02_0301 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D PU02_0339 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D PU02_0940 LSU ribosomal protein L33p, zinc-independent K02913 RP-L33; large subunit ribosomal protein L33
D PU02_0717 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D PU02_0522 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D PU02_0269 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D PU02_0761 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D PU02_1353 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PU02_1360 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PU02_1364 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PU02_1357 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PU02_1354 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PU02_1361 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:banc03009]
D PU02_1185 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PU02_1184 GTP-binding protein Era K03595 era; GTPase
D PU02_1334 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D PU02_0933 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D PU02_0583 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D PU02_1037 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D PU02_1102 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PU02_1156 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PU02_0386 16S rRNA m(5)C 967 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PU02_1308 SUN protein (FMU protein) K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PU02_0650 16S rRNA (guanine(966)-N(2))-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PU02_0012 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PU02_0448 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PU02_0798 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PU02_0721 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PU02_1246 RNA binding methyltransferase FtsJ like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PU02_1105 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PU02_1335 Cell division protein FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PU02_1329 LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PU02_0460 SAM dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PU02_1143 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D PU02_0470 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PU02_1245 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PU02_0649 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PU02_0891 Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PU02_0023 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PU02_0593 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PU02_0373 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D PU02_0819 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PU02_0984 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PU02_0948 Putative Holliday junction resolvase YggF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PU02_1275 GTP-binding protein EngA K03977 engA; GTPase
D PU02_1045 GTP-binding protein HflX K03665 hflX; GTPase
D PU02_1257 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PU02_1190 GTP pyrophosphokinase, (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PU02_0580 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PU02_0584 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D PU02_1330 Iojap protein K09710 ybeB; ribosome-associated protein
D PU02_0590 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly K07042 ybeY; probable rRNA maturation factor
D PU02_0758 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:banc03016]
D PU02_1062 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PU02_1068 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PU02_0991 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PU02_0647 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PU02_0352 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PU02_0966 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PU02_0908 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PU02_0920 Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PU02_0889 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PU02_1030 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PU02_1138 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PU02_1178 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PU02_0849 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PU02_0184 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PU02_0524 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PU02_0525 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PU02_0979 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PU02_0177 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PU02_1088 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PU02_0585 tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PU02_0515 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PU02_0579 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PU02_0977 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PU02_1257 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PU02_0833 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PU02_0450 GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PU02_0449 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PU02_0716 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PU02_0642 Ribonuclease D related protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PU02_0919 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PU02_0475 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PU02_1266 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PU02_1267 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PU02_0648 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PU02_0936 tRNA dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PU02_0592 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PU02_0440 MiaB family protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D PU02_0958 tRNA:Cm32/Um32 methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D PU02_1110 tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PU02_0372 tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PU02_0757 tRNA (cytidine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PU02_0459 macromolecule metabolism K03437 spoU; RNA methyltransferase, TrmH family
D PU02_0747 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PU02_0961 tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PU02_1056 Iron binding protein SufA for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D PU02_1180 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress K06980 ygfZ; tRNA-modifying protein YgfZ
D PU02_0902 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PU02_0297 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PU02_0594 Putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PU02_0398 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PU02_0941 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PU02_0576 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:banc03012]
D PU02_0581 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D PU02_0496 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D PU02_1084 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D PU02_0858 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D PU02_1104 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D PU02_0857 Translation elongation factor G K02355 fusA; elongation factor G
D PU02_1292 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PU02_1081 Ribosome recycling factor K02838 frr; ribosome recycling factor
D PU02_1293 Methylase of polypeptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PU02_0760 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PU02_0266 Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D PU02_0305 Translation elongation factor P K02356 efp; elongation factor P
D PU02_0981 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PU02_0476 Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:banc03110]
D PU02_1089 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PU02_0262 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PU02_1113 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PU02_0575 ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PU02_0507 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PU02_0179 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PU02_0508 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PU02_0546 Chaperone protein Hsp33 K04083 hslO; molecular chaperone Hsp33
D PU02_0503 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PU02_1057 16 kDa heat shock protein A K04080 ibpA; molecular chaperone IbpA
D PU02_0180 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D PU02_0831 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PU02_1217 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PU02_0296 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PU02_1271 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PU02_0541 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D PU02_0506 Copper metallochaperone, Cox17-like protein K09796 pccA; periplasmic copper chaperone A
D PU02_1132 Peptidyl-prolyl cis-trans isomerase PpiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PU02_1289 Foldase protein PrsA precursor K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PU02_1154 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PU02_0477 thioredoxin K03671 TXN; thioredoxin
D PU02_1283 Glutaredoxin 3 (Grx2) K03676 grxC; glutaredoxin 3
D PU02_0923 putative monothiol glutaredoxin ycf64-like K07390 grxD; monothiol glutaredoxin
D PU02_0551 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:banc04131]
D PU02_1146 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PU02_0321 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PU02_0323 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PU02_0711 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:banc03032]
D PU02_1239 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PU02_1111 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PU02_1032 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D PU02_0462 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D PU02_0559 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PU02_1169 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PU02_0789 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PU02_0693 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0896 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0620 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0085 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0916 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PU02_0560 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PU02_1150 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PU02_0410 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PU02_0965 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PU02_0455 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PU02_0598 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PU02_1258 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PU02_0456 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PU02_0817 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PU02_0897 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PU02_0490 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PU02_0921 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PU02_1012 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PU02_0942 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:banc03036]
D PU02_1185 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PU02_0321 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PU02_1111 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PU02_1032 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D PU02_0462 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D PU02_0559 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PU02_1046 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PU02_0812 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PU02_0356 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PU02_0800 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PU02_0020 Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PU02_0364 Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PU02_0799 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PU02_0811 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PU02_0805 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PU02_0357 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PU02_0813 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PU02_0326 hypothetical protein K09888 zapA; cell division protein ZapA
D PU02_0436 ATPase K06916 zapE; cell division protein ZapE
D PU02_0983 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PU02_0447 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D PU02_0446 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PU02_0921 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PU02_1012 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PU02_0449 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PU02_0448 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PU02_1110 tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PU02_0375 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PU02_0420 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PU02_0719 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PU02_0221 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PU02_0234 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PU02_0206 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PU02_0222 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PU02_0714 GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:banc03400]
D PU02_1232 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PU02_0521 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PU02_1287 5-methyl-dCTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PU02_0288 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PU02_1192 Uracil-DNA glycosylase, family 5 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PU02_1212 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PU02_0732 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PU02_0640 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PU02_0854 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PU02_0362 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PU02_1013 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PU02_0817 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PU02_0456 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PU02_0895 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PU02_0774 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PU02_1144 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PU02_0821 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PU02_1097 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PU02_1096 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PU02_0884 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PU02_1191 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PU02_0987 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PU02_0538 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PU02_0658 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PU02_0731 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PU02_1248 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PU02_0916 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PU02_0560 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PU02_1150 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PU02_0410 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PU02_0965 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PU02_0455 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PU02_0598 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PU02_0693 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0896 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0620 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0085 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0888 RecA protein K03553 recA; recombination protein RecA
D PU02_0311 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PU02_0312 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PU02_0310 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PU02_0349 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PU02_1170 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PU02_0561 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PU02_0915 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PU02_1183 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PU02_0596 Recombination protein RecR K06187 recR; recombination protein RecR
D PU02_0816 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PU02_0478 ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PU02_0479 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D PU02_0897 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PU02_0490 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PU02_0942 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PU02_1111 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PU02_1032 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D PU02_0462 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D PU02_0615 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D PU02_0681 putative transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D PU02_1295 Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PU02_1294 Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:banc03029]
D PU02_0581 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D PU02_0496 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D PU02_1084 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D PU02_0858 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D PU02_1104 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D PU02_0857 Translation elongation factor G K02355 fusA; elongation factor G
D PU02_0334 ATP-dependent DNA helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D PU02_1184 GTP-binding protein Era K03595 era; GTPase
D PU02_0979 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PU02_0352 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PU02_0920 Aspartyl-tRNA(Asn) synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PU02_0908 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PU02_0950 Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PU02_1108 Aspartyl-tRNA(Asn) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PU02_0949 Aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PU02_0281 DNA primase/helicase K17680 PEO1; twinkle protein [EC:5.6.2.3]
D PU02_0693 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0896 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0620 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_0085 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PU02_1078 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D PU02_0507 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PU02_0503 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PU02_0179 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PU02_0180 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D PU02_0508 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PU02_0977 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PU02_0923 putative monothiol glutaredoxin ycf64-like K07390 grxD; monothiol glutaredoxin
D PU02_0719 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PU02_1241 Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D PU02_1044 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D PU02_0715 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PU02_0382 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion K14998 SURF1; surfeit locus 1 family protein
D PU02_0820 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:banc02000]
D PU02_0494 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PU02_0890 Beta-(1-->2)glucan export ATP-binding/permease protein NdvA K24819 ndvA; ATP-binding cassette, subfamily B, beta-glucan exporter [EC:7.5.2.3]
D PU02_1177 Lipid A export ATP-binding/permease protein MsbA K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D PU02_0302 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PU02_0360 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PU02_0329 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D PU02_1301 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PU02_1302 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PU02_1303 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PU02_1304 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PU02_0634 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PU02_0635 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D PU02_0636 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D PU02_0637 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PU02_0853 Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PU02_0851 Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D PU02_0852 Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D PU02_0850 Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PU02_0114 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PU02_0116 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D PU02_0115 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PU02_0413 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D PU02_0412 ABC transporter permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D PU02_0411 Methionine ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D PU02_1070 Amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PU02_1072 Amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D PU02_1071 Arginine ABC transporter, permease protein ArtQ K02029 ABC.PA.P; polar amino acid transport system permease protein
D PU02_0986 ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PU02_0733 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PU02_0734 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PU02_0735 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PU02_0736 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PU02_0737 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PU02_0738 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PU02_0601 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D PU02_0602 Oligopeptide transport system permease protein OppC K13895 yejE; microcin C transport system permease protein
D PU02_0603 Oligopeptide transport system permease protein OppB K13896 yejF; microcin C transport system ATP-binding protein
D PU02_1200 Periplasmic hemin-binding protein K25132 hmuT; heme transport system substrate-binding protein
D PU02_1201 Hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D PU02_1202 ABC-type hemin transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D PU02_0126 Iron compound ABC uptake transporter substrate-binding protein PiuA K25282 yclQ; iron-siderophore transport system substrate-binding protein
D PU02_0128 Iron compound ABC transporter, permease protein K25283 yclO; iron-siderophore transport system permease protein
D PU02_0127 Petrobactin ABC transporter, permease protein I K25284 yclN; iron-siderophore transport system permease protein
D PU02_0129 Iron compound ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D PU02_0526 Manganese ABC transporter, periplasmic-binding protein SitA K11604 sitA; manganese/iron transport system substrate-binding protein
D PU02_0528 Manganese ABC transporter, inner membrane permease protein SitC K11605 sitC; manganese/iron transport system permease protein
D PU02_0529 Manganese ABC transporter, inner membrane permease protein SitD K11606 sitD; manganese/iron transport system permease protein
D PU02_0527 Manganese ABC transporter, ATP-binding protein SitB K11607 sitB; manganese/iron transport system ATP-binding protein
D PU02_0665 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D PU02_0664 Transmembrane component BioN of energizing module of biotin ECF transporter K16783 bioN; biotin transport system permease protein
D PU02_0662 ATPase component BioM of energizing module of biotin ECF transporter K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D PU02_1300 Zinc ABC transporter, periplasmic-binding protein ZnuA K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PU02_1299 Zinc ABC transporter, inner membrane permease protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PU02_1298 Zinc ABC transporter, ATP-binding protein ZnuC K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PU02_1151 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D PU02_1152 Permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D PU02_0466 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PU02_0990 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D PU02_0989 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PU02_0552 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D PU02_0553 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D PU02_0554 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PU02_0357 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PU02_0356 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PU02_0975 Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PU02_0826 Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D PU02_0785 Tetracycline efflux protein TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PU02_0922 MFS family multidrug efflux protein, similarity to bicyclomycin resistance protein Bcr K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PU02_0102 Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PU02_0003 Phosphoenolpyruvate-protein phosphotransferase of PTS system K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D PU02_0468 PTS system nitrogen-specific IIA component, PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PU02_0713 Glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PU02_0019 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PU02_0788 Small-conductance mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel
D PU02_1320 Mg/Co/Ni transporter MgtE K06213 mgtE; magnesium transporter
D PU02_0160 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D PU02_0141 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D PU02_0290 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D PU02_0289 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D PU02_0315 MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D PU02_0316 Tol biopolymer transport system, TolR protein K03560 tolR; biopolymer transport protein TolR
D PU02_0644 Hemin binding protein c K16079 omp31; outer membrane immunogenic protein
D PU02_0144 Type V autotransporter K12678 aidA-I; autotransporter family porin
D PU02_0145 Type V autotransporter K07279 yfaL; autotransporter family porin
D PU02_1198 TonB-dependent hemin, ferrichrome receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PU02_0847 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D PU02_1078 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D PU02_0815 competence lipoprotein ComL, putative K05807 bamD; outer membrane protein assembly factor BamD
D PU02_0492 hypothetical protein K07278 tamA; translocation and assembly module TamA
D PU02_0493 gramicidin S biosynthesis GrsT protein K09800 tamB; translocation and assembly module TamB
D PU02_1338 Surface protein/Bartonella adhesin K21449 ata; trimeric autotransporter adhesin
D PU02_1336 Surface protein/Bartonella adhesin K21449 ata; trimeric autotransporter adhesin
D PU02_0465 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D PU02_0464 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D PU02_1153 Outer membrane protein Imp, required for envelope biogenesis K04744 lptD; LPS-assembly protein
D PU02_0351 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D PU02_0589 Magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D PU02_0838 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D PU02_1278 Na+/H+ antiporter NhaA type K03313 nhaA; Na+:H+ antiporter, NhaA family
D PU02_0777 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D PU02_1115 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PU02_0427 pH adaptation potassium efflux system a K05559 phaA; multicomponent K+:H+ antiporter subunit A
D PU02_0426 Na(+) H(+) antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D PU02_0425 Na(+) H(+) antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D PU02_0424 Na(+) H(+) antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D PU02_0423 Na(+) H(+) antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D PU02_0422 Na(+) H(+) antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D PU02_0176 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D PU02_0380 Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D PU02_0286 putative transmembrane iron-regulated protein K22737 mbfA; erythrin-vacuolar iron transport family protein
D PU02_0805 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PU02_1196 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D PU02_0298 Outer membrane lipoprotein omp16 precursor K03640 pal; peptidoglycan-associated lipoprotein
D PU02_0320 tolB protein precursor, periplasmic protein K03641 tolB; TolB protein
D PU02_0912 Cytochrome c-type biogenesis protein CcdA (DsbD-like) K06196 ccdA; cytochrome c-type biogenesis protein
D PU02_0101 Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D PU02_0361 Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D PU02_1219 Cytochrome c heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:banc02044]
D PU02_0847 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D PU02_1324 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) K02221 yggT; YggT family protein
D PU02_0172 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PU02_0165 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PU02_0143 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D PU02_0157 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PU02_0163 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PU02_0147 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PU02_0130 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PU02_0171 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PU02_0187 Major pilus subunit of type IV secretion complex (VirB2) K03197 virB2; type IV secretion system protein VirB2
D PU02_0188 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) K03198 virB3; type IV secretion system protein VirB3
D PU02_0189 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D PU02_0191 Integral inner membrane protein of type IV secretion complex (VirB6) K03201 virB6; type IV secretion system protein VirB6
D PU02_0192 Lipoprotein of type IV secretion complex that spans outer membrane and periplasm, VirB7 K03202 virB7; type IV secretion system protein VirB7
D PU02_0193 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8) K03203 virB8; type IV secretion system protein VirB8
D PU02_0194 Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9) K03204 virB9; type IV secretion system protein VirB9
D PU02_0195 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) K03195 virB10; type IV secretion system protein VirB10
D PU02_0196 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11) K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D PU02_0199 Type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PU02_0144 Type V autotransporter K12678 aidA-I; autotransporter family porin
D PU02_0145 Type V autotransporter K07279 yfaL; autotransporter family porin
D PU02_1290 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PU02_0541 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D PU02_0841 Protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D PU02_1103 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PU02_1130 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PU02_0880 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D PU02_0392 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PU02_0441 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D PU02_1135 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PU02_0715 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PU02_1141 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PU02_1140 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PU02_1139 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins
C 02022 Two-component system [BR:banc02022]
D PU02_0768 Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PU02_0769 DNA-binding response regulator PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PU02_0504 Sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PU02_0505 DNA-binding response regulator ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D PU02_0137 Transcriptional regulator K21603 ftcR; two-component system, OmpR family, flagellar system response regulator FtcR
D PU02_1216 DNA-binding heavy metal response regulator K02483 K02483; two-component system, OmpR family, response regulator
D PU02_1117 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PU02_1116 Nitrogen regulation protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D PU02_1214 Two-component sensor histidine kinase PleC K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D PU02_1016 Response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D PU02_0935 Sensor histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PU02_0744 Cell cycle transcriptional regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D PU02_1059 Response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
C 02035 Bacterial motility proteins [BR:banc02035]
D PU02_0157 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PU02_0147 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PU02_0130 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PU02_0171 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PU02_0172 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PU02_0165 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PU02_0164 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PU02_0161 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PU02_0163 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PU02_0143 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D PU02_0151 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D PU02_0152 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PU02_0149 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D PU02_0148 Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D PU02_0154 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PU02_0156 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PU02_0155 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PU02_0131 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D PU02_0158 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PU02_0153 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PU02_0169 Flagellar protein FlgJ (peptidoglycan hydrolase) K02395 flgJ; peptidoglycan hydrolase FlgJ
D PU02_0136 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PU02_0135 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PU02_0134 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D PU02_0724 Flagellin protein FlaA K02406 fliC; flagellin
D PU02_0160 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D PU02_0141 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D PU02_0140 Chemotaxis protein motC K10564 motC; chemotaxis protein MotC
D PU02_0139 hypothetical protein K10565 motD; chemotaxis protein MotD
D PU02_0133 Flagellar protein flaF K06602 flaF; flagellar biosynthesis activator protein FlaF
D PU02_0132 Flagellar basal-body rod modification protein FlgD K06601 flbT; flagellar biosynthesis repressor protein FlbT
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:banc04812]
D PU02_0813 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PU02_0812 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PU02_0447 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D PU02_0446 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:banc04147]
D PU02_0321 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PU02_1127 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PU02_0323 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PU02_0322 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PU02_0179 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PU02_0507 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PU02_0007 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PU02_1310 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PU02_0858 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D PU02_1104 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D PU02_1088 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PU02_0881 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PU02_0406 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PU02_0473 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PU02_0017 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_0894 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PU02_0384 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PU02_1121 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0430 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PU02_0726 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D PU02_1131 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PU02_0711 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:banc02048]
D PU02_1233 Modification methylase K13581 ccrM; modification methylase [EC:2.1.1.72]
D PU02_0078 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D PU02_0695 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D PU02_0687 Programmed cell death toxin PemK K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D PU02_0688 Programmed cell death antitoxin PemI K18842 chpS; antitoxin ChpS
D PU02_0624 RelE/StbE replicon stabilization toxin K06218 relE; mRNA interferase RelE/StbE
D PU02_0702 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D PU02_0625 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D PU02_0063 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D PU02_0682 hypothetical protein K18843 hicB; antitoxin HicB
D PU02_0066 putative membrane protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D PU02_0033 HigB toxin protein K07334 higB-1; toxin HigB-1
D PU02_0072 HigB toxin protein K07334 higB-1; toxin HigB-1
D PU02_0067 putative prophage protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PU02_0034 HigA protein (antitoxin to HigB) K21498 higA-1; antitoxin HigA-1
D PU02_0071 HigA protein (antitoxin to HigB) K21498 higA-1; antitoxin HigA-1
D PU02_0699 hypothetical protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D PU02_0623 hypothetical protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D PU02_0080 hypothetical protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D PU02_0813 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PU02_0921 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PU02_1012 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PU02_1062 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PU02_1068 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PU02_0988 YgfY K09159 cptB; antitoxin CptB
D PU02_0977 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:banc01504]
D PU02_0785 Tetracycline efflux protein TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PU02_0847 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:banc03100]
D PU02_1355 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PU02_1362 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PU02_1368 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PU02_1349 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PU02_1382 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PU02_1388 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PU02_1375 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PU02_1380 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PU02_1376 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PU02_1394 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PU02_1358 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PU02_1377 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PU02_1367 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PU02_1390 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PU02_1350 tRNA-His K14226 tRNA-His; tRNA His
D PU02_1356 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PU02_1363 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PU02_1366 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PU02_1374 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PU02_1385 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PU02_1370 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PU02_1392 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PU02_1378 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PU02_1373 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PU02_1352 tRNA-Met K14230 tRNA-Met; tRNA Met
D PU02_1359 tRNA-Met K14230 tRNA-Met; tRNA Met
D PU02_1371 tRNA-Met K14230 tRNA-Met; tRNA Met
D PU02_1372 tRNA-Met K14230 tRNA-Met; tRNA Met
D PU02_1351 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PU02_1386 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PU02_1383 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PU02_1379 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PU02_1347 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PU02_1348 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PU02_1393 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PU02_1384 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PU02_1365 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PU02_1369 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PU02_1389 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PU02_1391 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PU02_1387 tRNA-Val K14237 tRNA-Val; tRNA Val
D PU02_1381 tRNA-Val K14237 tRNA-Val; tRNA Val
D PU02_1364 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PU02_1357 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PU02_1354 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PU02_1361 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PU02_1353 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PU02_1360 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PU02_0725 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D PU02_0980 Thiol peroxidase, Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PU02_0183 hypothetical protein K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PU02_0105 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PU02_0846 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PU02_1137 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PU02_0588 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PU02_0765 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PU02_0452 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PU02_0314 4-hydroxybenzoyl-CoA thioesterase family active site K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PU02_0967 Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PU02_0707 Phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PU02_1343 Phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PU02_0032 Phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PU02_0629 Phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PU02_0246 Phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PU02_0416 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D PU02_1091 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D PU02_1017 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PU02_0517 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PU02_0755 ATPase, MoxR family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PU02_0929 putative esterase of the alpha/beta hydrolase fold K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D PU02_0335 4Fe-4S ferredoxin, iron-sulfur binding K05524 fdxA; ferredoxin
D PU02_0727 Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D PU02_0947 Acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D PU02_1296 Ribonucleotide reduction protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D PU02_0486 hypothetical protein K06203 cysZ; CysZ protein
D PU02_0354 YggS K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PU02_0840 membrane protein, putative K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D PU02_0396 HemY-like protein K02498 hemY; HemY protein
D PU02_0488 Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D PU02_1119 Putative oligoketide cyclase/dehydratase or lipid transport protein YfjG K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PU02_0782 Cold shock protein CspG K03704 cspA; cold shock protein
D PU02_0952 Cold shock protein CspB K03704 cspA; cold shock protein
D PU02_0674 Phage antirepressor protein K07741 antB; anti-repressor protein
D PU02_0036 Anti-repressor protein K07741 antB; anti-repressor protein
D PU02_0065 Anti-repressor protein K07741 antB; anti-repressor protein
D PU02_0609 Phage antirepressor protein K07741 antB; anti-repressor protein
D PU02_0074 Anti-repressor protein K07741 antB; anti-repressor protein
D PU02_0092 Phage antirepressor protein K07741 antB; anti-repressor protein
C 99974 Translation
C 99975 Protein processing
D PU02_1090 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PU02_1109 Cell division trigger factor K03545 tig; trigger factor
D PU02_1193 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D PU02_1297 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib K06191 nrdH; glutaredoxin-like protein NrdH
D PU02_0491 Mg(2+) chelatase family protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D PU02_0956 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PU02_0518 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D PU02_0722 Endonuclease K07460 yraN; putative endonuclease
D PU02_0943 Rossmann fold nucleotide-binding protein Smf K04096 smf; DNA processing protein
D PU02_0259 Phage terminase large subunit K06909 xtmB; phage terminase large subunit
D PU02_0887 Holliday junction DNA helicase K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D PU02_0597 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PU02_0661 Phenylalanine-specific permease K03293 TC.AAT; amino acid transporter, AAT family
D PU02_0663 Phenylalanine-specific permease K03293 TC.AAT; amino acid transporter, AAT family
D PU02_0008 RND multidrug efflux transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
C 99978 Cell growth
D PU02_0442 putative intracellular septation protein K06190 ispZ; intracellular septation protein
D PU02_1328 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D PU02_1321 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D PU02_0591 Phosphate starvation-inducible ATPase PhoH with RNA binding motif K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D PU02_0014 AsmA family protein K07289 asmA; AsmA protein
D PU02_1220 Cytochrome c-type biogenesis protein CcmE, heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D PU02_1218 Cytochrome c heme lyase subunit CcmL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D PU02_0638 Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D PU02_1199 Hemin transport protein HmuS K07225 hmuS; putative hemin transport protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PU02_0976 Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PU02_0974 Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D PU02_0543 FxsA protein K07113 fxsA; UPF0716 protein FxsA
D PU02_1225 Sulfur acceptor protein SufE for iron-sulfur cluster assembly K02426 sufE; cysteine desulfuration protein SufE
D PU02_0104 Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup K07146 K07146; UPF0176 protein
D PU02_1009 LemA family protein K03744 lemA; LemA protein
C 99997 Function unknown
D PU02_1010 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein
D PU02_0457 membrane protein K06890 K06890; uncharacterized protein
D PU02_0051 Phage baseplate assembly protein K06903 W; Bacteriophage baseplate protein W
D PU02_0039 Phage tail protein D K06905 D; Bacteriophage probable baseplate hub protein
D PU02_0041 Phage-related tail protein K06906 gpU; phage tail protein
D PU02_0046 Phage tail sheath monomer K06907 FI; Bacteriophage tail sheath protein
D PU02_0045 Phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D PU02_1286 L-cystine uptake protein TcyP K06956 K06956; uncharacterized protein
D PU02_0978 Alpha/beta hydrolase K07018 K07018; uncharacterized protein
D PU02_0306 tetratricopeptide repeat family protein K07126 K07126; uncharacterized protein
D PU02_1029 Protein YidD K08998 K08998; uncharacterized protein
D PU02_0953 exported protein K09005 K09005; uncharacterized protein
D PU02_1323 hypothetical protein K09131 K09131; uncharacterized protein
D PU02_0792 hypothetical protein K09160 K09160; uncharacterized protein
D PU02_0408 Hypothetical protein K09768 K09768; uncharacterized protein
D PU02_0530 heme utilization-like protein K09790 K09790; uncharacterized protein
D PU02_0112 Protein YcaR in KDO2-Lipid A biosynthesis cluster K09791 K09791; uncharacterized protein
D PU02_0795 Integral membrane protein K09799 K09799; uncharacterized protein
D PU02_0793 Protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D PU02_0264 non-essential pilus assembly protein K09862 K09862; uncharacterized protein
D PU02_1065 hypothetical protein K09924 K09924; uncharacterized protein
D PU02_1188 hypothetical protein K09928 K09928; uncharacterized protein
D PU02_0824 hypothetical protein K09985 K09985; uncharacterized protein
D PU02_0299 hypothetical protein K09987 K09987; uncharacterized protein
D PU02_0848 hypothetical protein K09991 K09991; uncharacterized protein
D PU02_0582 putative nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
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#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 22, 2024