+D	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Prokaryotic Defense System - Bacillus amyloliquefaciens TA208</h2>
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A<b>CRISPR-Cas system</b>
B  Universal Cas proteins
B  Type I CRISPR-Cas system
C    Type I signiture cas proteins
C    Subtype I-A factors
C    Subtype I-B factors
C    Subtype I-C factors
C    Subtype I-D factors
C    Subtype I-E factors
C    Subtype I-F factors
C    Subtype I-U factors
B  Type II CRISPR-Cas system
C    Type II signiture cas proteins
C    Subtype II-A factors
C    Subtype II-B factors
B  Type III CRISPR-Cas system
C    Type III signiture cas proteins
C    Subtype III-A factors
C    Subtype III-B factors
C    Subtype III-U factors
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A<b>Restriction and modification system (R-M system)</b>
B  Type I R-M system
B  Type II R-M system
C    Restriction endonucleases
C    DNA methyltransferases
D      BAMTA208_14440 ytxK; nucleic acid methyltransferase	K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] 
D      BAMTA208_16660 Modification methylase BamHI; M.BamHI; N	K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] 
D      BAMTA208_06715 SP-beta prophage DNA (cytosine-5-)-methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
D      BAMTA208_19835 DNA (cytosine-5)-methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
B  Type III R-M system
B  Type IV R-M system
C    BAMTA208_15405 prophage Lp3 protein 12	K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] 
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A<b>Toxin-antitoxin system (TA system)</b>
B  Type I TA system
C    Hok-Sok
C    SymE-SymR
C    Ldr-Rdl
C    TisB-IstR
C    Ibs-Sib
C    ShoB-OhsC
C    RalR-RalA
B  Type II TA system
C    MazF-MazE
D      BAMTA208_02255 ndoA; endoribonuclease toxin	K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] 
D      BAMTA208_02250 ndoAI; Antitoxin EndoAI EndoA inhibitor	K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI 
C    ChpB-ChpS
C    YhaV-PrlF
C    RelE/StbE-RelB/StbD
C    YafQ-dinJ
C    YoeB-YefM
C    HipA-HipB
C    HicA-HicB
C    YafO-YafN
C    Hha-TomB
C    PspC-PspB
D      BAMTA208_17770 yvlC; regulator (stress mediated)	K03973 pspC; phage shock protein C 
C    CcdB-CcdA
C    ParE-ParD
C    Doc-Phd
C    HigB-HigA
C    MqsR-MqsA
C    VapC-VapB
C    PezT-PezA
C    YobL-YobK
C    YokI-YokJ
C    YqcG-YqcF
C    YxiD-YxxD
D      BAMTA208_18315 yxxD; hypothetical protein	K21494 yxxD; antitoxin YxxD 
C    FitB-FitA
C    BC_0920-BC_0921
C    Type II TA system related factors
D      BAMTA208_09520 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ 
D      BAMTA208_09915 mreBH; rod-share determining protein MreBH	K03569 mreB; rod shape-determining protein MreB and related proteins 
D      BAMTA208_18445 mbl; rod shape-determining protein Mbl	K03569 mreB; rod shape-determining protein MreB and related proteins 
D      BAMTA208_13750 mreB; rod shape-determining protein MreB	K03569 mreB; rod shape-determining protein MreB and related proteins 
D      BAMTA208_08030 parC; DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] 
D      BAMTA208_08035 parE; DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] 
B  Type III TA system
C    AbiQ system
B  Type IV TA system
C    YeeV-YeeU
C    CptA-CptB
B  Type V TA system
C    GhoT-GhoS
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A<b>DNA phosphothiolation system</b>
B  Sulfur modification proteins
C    BAMTA208_13510 iscS; cysteine desulfurase involved in tRNA thiolation	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
C    BAMTA208_14495 iscS3; cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
C    BAMTA208_13675 nifS; cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
B  DNA phosphorothioation-dependent restriction proteins
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#Last updated: November 7, 2023