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Transcription Machinery - Bombus bifarius (two-form bumblebee)
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E 117208074 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E 117214252 DNA-directed RNA polymerase II subunit RPB3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E 117205997 DNA-directed RNA polymerase II subunit RPB11 isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E 117205885 DNA-directed RNA polymerase II subunit RPB7 isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 117206414 DNA-directed RNA polymerase II subunit RPB9 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
E 117210890 DNA-directed RNA polymerase II subunit GRINL1A K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A
D Pol I, II, III common subunits
E 117217252 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 117205960 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 117205462 DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 117213502 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 117209007 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
E 117213851 transcription initiation factor IIA subunit 1 isoform X1 K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E 117215081 transcription initiation factor IIA subunit 2 K03123 TFIIA2; transcription initiation factor TFIIA small subunit
D TFIIB
E 117209032 transcription initiation factor IIB isoform X1 K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E 117204087 TATA box-binding protein-like protein 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 117212013 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 117205487 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 117210056 transcription initiation factor TFIID subunit 1 isoform X1 K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
E 117207324 transcription initiation factor TFIID subunit 2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 117214579 transcription initiation factor TFIID subunit 3 isoform X1 K14650 TAF3; transcription initiation factor TFIID subunit 3
E 117204350 transcription initiation factor TFIID subunit 4 isoform X1 K03129 TAF4; transcription initiation factor TFIID subunit 4
E 117213978 transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 117215738 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 117207082 uncharacterized protein LOC117207082 K03131 TAF6; transcription initiation factor TFIID subunit 6
E 117211324 transcription initiation factor TFIID subunit 6-like K03131 TAF6; transcription initiation factor TFIID subunit 6
E 117206976 transcription initiation factor TFIID subunit 7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E 117205645 transcription initiation factor TFIID subunit 8 K14649 TAF8; transcription initiation factor TFIID subunit 8
E 117209484 transcription initiation factor TFIID subunit 9-like K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 117209648 transcription initiation factor TFIID subunit 9-like K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 117217007 transcription initiation factor TFIID subunit 10-like K03134 TAF10; transcription initiation factor TFIID subunit 10
E 117211876 transcription initiation factor TFIID subunit 11 K03135 TAF11; transcription initiation factor TFIID subunit 11
E 117208817 transcription initiation factor TFIID subunit 12b isoform X1 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 117210806 transcription initiation factor TFIID subunit 13 isoform X1 K03127 TAF13; transcription initiation factor TFIID subunit 13
D TFIIE
E 117209581 general transcription factor IIE subunit 1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E 117209749 general transcription factor IIE subunit 2 K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
D TFIIF
E 117214584 general transcription factor IIF subunit 1 K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha
E 117212913 general transcription factor IIF subunit 2 K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
D TFIIH
E 117212217 general transcription factor IIH subunit 1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 117208948 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 117216678 general transcription factor IIH subunit 3 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 117210403 general transcription factor IIH subunit 4 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 117213956 general transcription and DNA repair factor IIH helicase subunit XPB isoform X1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 117206522 general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 117207304 general transcription factor IIH subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 117213775 cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 117209034 CDK-activating kinase assembly factor MAT1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 117216293 cyclin-H K06634 CCNH; cyclin H
C Mediator complex
D Head
E 117205096 mediator of RNA polymerase II transcription subunit 6 isoform X1 K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E 117212993 mediator of RNA polymerase II transcription subunit 8 isoform X1 K15129 MED8; mediator of RNA polymerase II transcription subunit 8
E 117212434 mediator of RNA polymerase II transcription subunit 11 K15131 MED11; mediator of RNA polymerase II transcription subunit 11
E 117207369 mediator of RNA polymerase II transcription subunit 17 K15133 MED17; mediator of RNA polymerase II transcription subunit 17
E 117205951 mediator of RNA polymerase II transcription subunit 18 K15135 MED18; mediator of RNA polymerase II transcription subunit 18
E 117207062 mediator of RNA polymerase II transcription subunit 19 K15137 MED19; mediator of RNA polymerase II transcription subunit 19
E 117206063 mediator of RNA polymerase II transcription subunit 22-like K15139 MED22; mediator of RNA polymerase II transcription subunit 22
E 117210133 mediator of RNA polymerase II transcription subunit 28-like K15141 MED28; mediator of RNA polymerase II transcription subunit 28
E 117205138 mediator of RNA polymerase II transcription subunit 30-like isoform X1 K15143 MED30; mediator of RNA polymerase II transcription subunit 30
D Middle
E 117210715 mediator of RNA polymerase II transcription subunit 1 isoform X1 K15144 MED1; mediator of RNA polymerase II transcription subunit 1
E 117204116 mediator of RNA polymerase II transcription subunit 4 K15146 MED4; mediator of RNA polymerase II transcription subunit 4
E 117211205 mediator of RNA polymerase II transcription subunit 7 K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E 117205876 mediator of RNA polymerase II transcription subunit 9 K15149 MED9; mediator of RNA polymerase II transcription subunit 9
E 117207744 mediator of RNA polymerase II transcription subunit 10 K15151 MED10; mediator of RNA polymerase II transcription subunit 10
E 117207075 mediator of RNA polymerase II transcription subunit 21 isoform X1 K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E 117213962 mediator of RNA polymerase II transcription subunit 31 K15153 MED31; mediator of RNA polymerase II transcription subunit 31
D Tail
E 117211921 mediator of RNA polymerase II transcription subunit 14 K15156 MED14; mediator of RNA polymerase II transcription subunit 14
E 117210676 mediator of RNA polymerase II transcription subunit 15 K15157 MED15; mediator of RNA polymerase II transcription subunit 15
E 117209950 mediator of RNA polymerase II transcription subunit 16 isoform X1 K15159 MED16; mediator of RNA polymerase II transcription subunit 16
D CDK-module
E 117210421 cyclin-C K15161 CCNC; cyclin-C
E 117204906 mediator of RNA polymerase II transcription subunit 12 isoform X1 K15162 MED12; mediator of RNA polymerase II transcription subunit 12
E 117212119 mediator of RNA polymerase II transcription subunit 13 isoform X1 K15164 MED13; mediator of RNA polymerase II transcription subunit 13
D Other mediators
E 117210324 mediator of RNA polymerase II transcription subunit 23 K15166 MED23; mediator of RNA polymerase II transcription subunit 23
E 117206381 mediator of RNA polymerase II transcription subunit 24 isoform X1 K15167 MED24; mediator of RNA polymerase II transcription subunit 24
E 117207452 mediator of RNA polymerase II transcription subunit 25-like isoform X1 K15168 MED25; mediator of RNA polymerase II transcription subunit 25
E 117216989 mediator of RNA polymerase II transcription subunit 26 isoform X1 K15169 MED26; mediator of RNA polymerase II transcription subunit 26
E 117209733 mediator of RNA polymerase II transcription subunit 27 isoform X1 K15170 MED27; mediator of RNA polymerase II transcription subunit 27
C Coactivators
D SAGA/TFTC/STAGA complex
E 117212636 histone acetyltransferase KAT2A K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E 117206364 transformation/transcription domain-associated protein K08874 TRRAP; transformation/transcription domain-associated protein
E 117205558 transcription initiation protein SPT3 homolog isoform X1 K11313 SUPT3H; transcription initiation protein SPT3
E 117206354 transcriptional adapter 2-alpha-like isoform X1 K11314 TADA2A; transcriptional adapter 2-alpha
E 117214506 transcriptional adapter 3-A K11315 TADA3; transcriptional adapter 3
E 117216195 transcriptional adapter 1-like isoform X1 K11317 TADA1; transcriptional adapter 1
E 117207324 transcription initiation factor TFIID subunit 2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 117204350 transcription initiation factor TFIID subunit 4 isoform X1 K03129 TAF4; transcription initiation factor TFIID subunit 4
E 117213978 transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 117215738 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 117207082 uncharacterized protein LOC117207082 K03131 TAF6; transcription initiation factor TFIID subunit 6
E 117211324 transcription initiation factor TFIID subunit 6-like K03131 TAF6; transcription initiation factor TFIID subunit 6
E 117206976 transcription initiation factor TFIID subunit 7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E 117209484 transcription initiation factor TFIID subunit 9-like K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 117209648 transcription initiation factor TFIID subunit 9-like K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 117217007 transcription initiation factor TFIID subunit 10-like K03134 TAF10; transcription initiation factor TFIID subunit 10
E 117208817 transcription initiation factor TFIID subunit 12b isoform X1 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 117205061 ataxin-7-like protein 3 K11363 SGF11; SAGA-associated factor 11
E 117211280 SAGA-associated factor 29 K11364 SGF29; SAGA-associated factor 29
E 117214851 uncharacterized protein LOC117214851 isoform X1 K11316 SUPT7L; STAGA complex 65 subunit gamma
E 117206555 ataxin-7-like protein 1 isoform X1 K11318 ATXN7; ataxin-7
E 117206724 chromodomain-helicase-DNA-binding protein 1 isoform X1 K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E 117205065 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 117211699 ubiquitin carboxyl-terminal hydrolase 22 K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 117212701 splicing factor 3B subunit 3 K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E 117215385 ATP-dependent helicase brm-like isoform X1 K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
E 117204805 ATP-dependent helicase brm-like K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
E 117210418 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E 117209770 SWI/SNF complex subunit SMARCC2 isoform X1 K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 117214171 brahma-associated protein of 60 kDa isoform X1 K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 117210358 bromodomain-containing protein 4-like K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
E 117210151 actin-5C K05692 ACTB_G1; actin beta/gamma 1
E 117212641 actin, clone 403-like
E 117206581 actin-like protein 6B K11652 ACTL6B; actin-like protein 6B
E 117206805 actin-like protein 6B K11652 ACTL6B; actin-like protein 6B
E 117212206 trithorax group protein osa isoform X1 K11653 ARID1; AT-rich interactive domain-containing protein 1
E 117211867 AT-rich interactive domain-containing protein 2-like K11765 ARID2; AT-rich interactive domain-containing protein 2
E 117214690 LOW QUALITY PROTEIN: protein polybromo-1 K11757 PBRM1; protein polybromo-1
D SWI/SNF complex
E 117210418 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D RSC complex
D Others
E 117204120 activated RNA polymerase II transcriptional coactivator p15 K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15
E 117208136 cell division cycle and apoptosis regulator protein 1-like K25827 CCAR1; cell division cycle and apoptosis regulator protein 1
C Other transcription-related factors
D Transcription elongation factors
E 117212965 transcription elongation factor S-II isoform X1 K03145 TFIIS; transcription elongation factor S-II
E 117207005 transcription elongation factor SPT4-A K15171 SUPT4H1; transcription elongation factor SPT4
E 117216243 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
E 117206279 transcription elongation factor SPT6-like isoform X1 K11292 SUPT6H; transcription elongation factor SPT6
E 117214062 transcription elongation factor SPT6 isoform X1 K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E 117214063 transcription termination factor 2 K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-]
E 117206505 uncharacterized protein LOC117206505 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 117210402 cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 117206335 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 117205297 cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 117207895 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 117212235 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 117211344 symplekin K06100 SYMPK; symplekin
E 117210495 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 117213156 5'-3' exoribonuclease 2 homolog K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 117211582 uncharacterized protein LOC117211582 K14845 RAI1; RAT1-interacting protein
E 117207504 regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1 K15559 RTT103; regulator of Ty1 transposition protein 103
E 117210834 hrp65 protein-like K13219 SFPQ; splicing factor, proline- and glutamine-rich
E 117210912 hrp65 protein-like K13219 SFPQ; splicing factor, proline- and glutamine-rich
E 117204916 SR-related and CTD-associated factor 4 K13191 RBM16; RNA-binding protein 16
E 117216567 uncharacterized protein LOC117216567 K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3]
E 117204871 putative peptidyl-prolyl cis-trans isomerase dodo K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
D PAF1 complex
E 117212276 RNA polymerase II-associated factor 1 homolog isoform X1 K15174 PAF1; RNA polymerase II-associated factor 1
E 117214375 parafibromin K15175 CDC73; parafibromin
E 117206595 RNA polymerase-associated protein CTR9 homolog K15176 CTR9; RNA polymerase-associated protein CTR9
E 117215752 another transcription unit protein K15177 LEO1; RNA polymerase-associated protein LEO1
E 117206540 RNA polymerase-associated protein Rtf1-like K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
E 117205767 negative elongation factor A isoform X1 K15179 WHSC2; negative elongation factor A
E 117204325 negative elongation factor B K15180 COBRA1; negative elongation factor B
E 117213210 negative elongation factor D isoform X1 K15181 TH1L; negative elongation factor C/D
E 117211704 negative elongation factor E K15182 RDBP; negative elongation factor E
D Super elongation complex (SEC)
E 117214668 RNA polymerase II elongation factor Ell K15183 ELL; RNA polymerase II elongation factor ELL
E 117214050 ell-associated factor Eaf K15186 EAF; ELL-associated factor
E 117216357 protein AF-9 isoform X1 K15187 MLLT1_3; YEATS domain-containing protein 1/3
E 117217323 cyclin-T-like isoform X1 K15188 CCNT; cyclin T
E 117210327 cyclin-dependent kinase 9 isoform X1 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D Little elongation complex (LEC)
E 117214668 RNA polymerase II elongation factor Ell K15183 ELL; RNA polymerase II elongation factor ELL
E 117207325 uncharacterized protein LOC117207325 K26144 ICE2; little elongation complex subunit 2
D Brd4/P-TEFb complex
E 117217323 cyclin-T-like isoform X1 K15188 CCNT; cyclin T
E 117210327 cyclin-dependent kinase 9 isoform X1 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
E 117213087 protein HEXIM1 K15189 HEXIM1_2; protein HEXIM1/2
E 117211316 probable RNA methyltransferase bin3 K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
E 117211154 la-related protein 7 K15191 LARP7; La-related protein 7
E 117217323 cyclin-T-like isoform X1 K15188 CCNT; cyclin T
E 117210327 cyclin-dependent kinase 9 isoform X1 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D DBIRD complex
D Others
E 117211242 TATA-binding protein-associated factor 172 isoform X1 K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E 117216906 protein Dr1 isoform X1 K21751 DR1; down-regulator of transcription 1
E 117206632 dr1-associated corepressor isoform X1 K21752 DRAP1; Dr1-associated corepressor
E 117208180 protein SPT2 homolog K15193 SPTY2D1; protein SPT2
E 117206825 AF4/FMR2 family member 4 isoform X1 K15194 AFF2; AF4/FMR2 family member 2
E 117210971 RNA polymerase II subunit A C-terminal domain phosphatase K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E 117210132 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1 K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 117207659 IWS1-like protein isoform X1 K17498 SPN1; transcription factor SPN1
E 117210212 RNA polymerase II-associated protein 1 K20826 RPAP1; RNA polymerase II-associated protein 1
E 117204565 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1 K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E 117208002 RNA polymerase II-associated protein 3 isoform X1 K23002 RPAP3; RNA polymerase II-associated protein 3
E 117205028 cyclin-K K23326 CCNK; cyclin K
E 117215065 GPN-loop GTPase 2 isoform X1 K24104 GPN; GPN-loop GTPase
E 117204631 GPN-loop GTPase 1 K24104 GPN; GPN-loop GTPase
E 117204635 GPN-loop GTPase 3 K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E 117206927 DNA-directed RNA polymerase III subunit RPC1 K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E 117209390 DNA-directed RNA polymerase III subunit RPC2 isoform X1 K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
E 117210128 DNA-directed RNA polymerases I and III subunit RPAC1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 117214441 probable DNA-directed RNA polymerases I and III subunit RPAC2 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E 117213565 DNA-directed RNA polymerase III subunit RPC3 K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3
E 117214185 DNA-directed RNA polymerase III subunit RPC4 K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E 117217228 DNA-directed RNA polymerase III subunit RPC5 K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5
E 117213078 probable DNA-directed RNA polymerase III subunit RPC6 K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E 117213092 probable DNA-directed RNA polymerase III subunit RPC6 K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E 117207317 DNA-directed RNA polymerase III subunit RPC7-like K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E 117211714 DNA-directed RNA polymerase III subunit RPC8 K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E 117209213 DNA-directed RNA polymerase III subunit RPC9 K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
D Pol I, II, III common subunits
E 117217252 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 117205960 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 117205462 DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 117213502 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 117209007 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
E 117214849 zinc finger protein 888-like K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E 117204087 TATA box-binding protein-like protein 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 117212013 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 117205487 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 117210121 transcription factor IIIB 90 kDa subunit isoform X1 K15196 BRF1; transcription factor IIIB 90 kDa subunit
E 117207310 transcription factor TFIIIB component B'' K15198 BDP1; transcription factor TFIIIB component B''
D TFIIIC
E 117208145 general transcription factor 3C polypeptide 1 K15199 GTF3C1; general transcription factor 3C polypeptide 1
E 117210754 uncharacterized protein LOC117210754 isoform X1 K15200 GTF3C2; general transcription factor 3C polypeptide 2
E 117205416 general transcription factor 3C polypeptide 3 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E 117217261 uncharacterized protein LOC117217261 K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48]
E 117212278 general transcription factor 3C polypeptide 5 K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E 117208121 uncharacterized protein LOC117208121 K15203 GTF3C6; general transcription factor 3C polypeptide 6
D TFIIIC, fungi type
E 117212278 general transcription factor 3C polypeptide 5 K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E 117205416 general transcription factor 3C polypeptide 3 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
E 117204523 snRNA-activating protein complex subunit 1 isoform X1 K15208 SNAPC1; snRNA-activating protein complex subunit 1
E 117214452 snRNA-activating protein complex subunit 3 K15210 SNAPC3; snRNA-activating protein complex subunit 3
D Octamer transcription factors
E 117212494 POU domain, class 2, transcription factor 1-like isoform X1 K09364 POU2F; POU domain transcription factor, class 2
D Others
E 117210476 zinc finger protein 76-like isoform X1 K20828 ZNF143_76; zinc finger protein 143/76
E 117211382 repressor of RNA polymerase III transcription MAF1 homolog isoform X1 K25817 MAF1; repressor of RNA polymerase III transcription MAF1
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E 117213760 DNA-directed RNA polymerase I subunit RPA1 K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
E 117204215 DNA-directed RNA polymerase I subunit RPA2 isoform X1 K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E 117210128 DNA-directed RNA polymerases I and III subunit RPAC1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 117214441 probable DNA-directed RNA polymerases I and III subunit RPAC2 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E 117210024 uncharacterized protein LOC117210024 K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49
E 117212041 LOW QUALITY PROTEIN: uncharacterized protein MAL13P1.304 K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43
E 117216801 DNA-directed RNA polymerase I subunit RPA12 K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12
D Pol I, II, III common subunits
E 117217252 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 117205960 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 117205462 DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 117213502 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 117209007 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E 117204087 TATA box-binding protein-like protein 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 117212013 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 117205487 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 117209908 TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1 K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B
C Other transcription-related factors
D UBF
D Transcription initiation factors
E 117210425 RNA polymerase I-specific transcription initiation factor RRN3 K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
E 117209918 upstream activation factor subunit spp27 K15223 UAF30; upstream activation factor subunit UAF30
D Transcription elongation factors
E 117207005 transcription elongation factor SPT4-A K15171 SUPT4H1; transcription elongation factor SPT4
E 117216243 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E 117210318 chromatin-remodeling complex ATPase chain Iswi K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
D Transcription termination factors
D Others
E 117214155 nucleolar protein dao-5 isoform X1 K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E 117209032 transcription initiation factor IIB isoform X1 K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E 117209581 general transcription factor IIE subunit 1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024