+D GENES KO
#
KEGG Orthology (KO) - Bifidobacterium breve ACS-071-V-Sch8b
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bbv00010]
D HMPREF9228_1538 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0620 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0172 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0420 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF9228_0095 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF9228_0867 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF9228_0638 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF9228_0868 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF9228_0741 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9228_1624 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9228_1135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF9228_1101 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_0865 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9228_0596 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9228_1699 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HMPREF9228_0635 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF9228_0634 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF9228_1648 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9228_0545 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D HMPREF9228_1973 aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
C 00020 Citrate cycle (TCA cycle) [PATH:bbv00020]
D HMPREF9228_1508 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HMPREF9228_0679 acnA; aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HMPREF9228_0768 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_0839 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HMPREF9228_0840 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HMPREF9228_1048 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF9228_1049 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
C 00030 Pentose phosphate pathway [PATH:bbv00030]
D HMPREF9228_0420 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF9228_0249 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF9228_0247 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D HMPREF9228_0206 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D HMPREF9228_0246 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF9228_0815 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF9228_0859 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF9228_0860 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HMPREF9228_1653 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HMPREF9228_1869 putative 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D HMPREF9228_1078 xfp; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D HMPREF9228_0708 putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HMPREF9228_1454 putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HMPREF9228_1463 putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HMPREF9228_1473 putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HMPREF9228_1648 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9228_0267 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF9228_1081 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF9228_0095 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
C 00040 Pentose and glucuronate interconversions [PATH:bbv00040]
D HMPREF9228_0831 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF9228_0815 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF9228_1874 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D HMPREF9228_1701 GroES-like protein K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9]
D HMPREF9228_1819 putative dihydrodipicolinate synthase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
D HMPREF9228_0579 putative dihydrodipicolinate synthase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
C 00051 Fructose and mannose metabolism [PATH:bbv00051]
D HMPREF9228_0618 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HMPREF9228_0577 oxidoreductase, short chain dehydrogenase/reductase family protein K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D HMPREF9228_1822 oxidoreductase, short chain dehydrogenase/reductase family protein K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D HMPREF9228_1823 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D HMPREF9228_0576 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D HMPREF9228_0095 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF9228_0867 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF9228_0487 putative ribulose-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
D HMPREF9228_0485 PTS system, Fru family, IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D HMPREF9228_0486 phosphotransferase system, EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:bbv00052]
D HMPREF9228_0635 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF9228_0634 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF9228_1405 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF9228_1974 putative UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF9228_1406 galT; UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF9228_1636 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF9228_0831 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF9228_1648 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9228_1538 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0620 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0172 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_1601 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF9228_0010 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF9228_1757 Beta galactosidase small chain K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D HMPREF9228_1756 hypothetical protein K12112 ebgC; evolved beta-galactosidase subunit beta
D HMPREF9228_1909 beta-galactosidase trimerization domain protein K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D HMPREF9228_1367 beta-galactosidase trimerization domain protein K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D HMPREF9228_0438 beta-galactosidase trimerization domain protein K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D HMPREF9228_1868 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HMPREF9228_0308 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF9228_1959 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF9228_0546 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HMPREF9228_0111 alpha amylase, catalytic domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HMPREF9228_0117 alpha amylase, catalytic domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HMPREF9228_1954 alpha amylase, catalytic domain protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D HMPREF9228_1339 alpha amylase, catalytic domain protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:bbv00053]
D HMPREF9228_1989 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HMPREF9228_1988 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HMPREF9228_1987 putative sugar-specific permease, SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:bbv00500]
D HMPREF9228_0546 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HMPREF9228_0111 alpha amylase, catalytic domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HMPREF9228_0117 alpha amylase, catalytic domain protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D HMPREF9228_0103 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D HMPREF9228_0831 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF9228_1484 hypothetical protein K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58]
D HMPREF9228_1487 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1998 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_2002 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1477 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1266 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1715 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_0949 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF9228_1112 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF9228_0057 glgP; phosphorylase, glycogen/starch/alpha-glucan family K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HMPREF9228_1014 glgP; phosphorylase, glycogen/starch/alpha-glucan family K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HMPREF9228_0123 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D HMPREF9228_1003 alpha amylase, catalytic domain protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D HMPREF9228_1954 alpha amylase, catalytic domain protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D HMPREF9228_1339 alpha amylase, catalytic domain protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D HMPREF9228_1710 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HMPREF9228_0116 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HMPREF9228_0318 alpha amylase, catalytic domain protein K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D HMPREF9228_0920 glgA; glycogen synthase, Corynebacterium family K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D HMPREF9228_1758 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D HMPREF9228_1094 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D HMPREF9228_1707 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D HMPREF9228_1648 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9228_1538 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0620 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0172 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0420 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF9228_0618 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bbv00520]
D HMPREF9228_1244 carbohydrate binding domain protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D HMPREF9228_1141 glycosyl hydrolase family 3 N-terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HMPREF9228_1013 putative N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HMPREF9228_0623 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HMPREF9228_0180 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HMPREF9228_1012 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HMPREF9228_0622 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HMPREF9228_0618 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HMPREF9228_1372 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF9228_1385 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HMPREF9228_1077 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF9228_1838 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF9228_1728 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF9228_0173 putative N-acetylmannosamine-6-phosphate epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D HMPREF9228_1538 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0620 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0172 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0545 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D HMPREF9228_1648 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9228_0831 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF9228_1405 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF9228_1974 putative UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF9228_1406 galT; UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF9228_1636 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF9228_1868 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HMPREF9228_0420 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF9228_0949 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:bbv00620]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_1065 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF9228_1699 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9228_1084 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF9228_1083 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF9228_1101 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF9228_1798 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D HMPREF9228_0582 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HMPREF9228_0865 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9228_0596 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9228_1704 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HMPREF9228_0044 ppc; phosphoenolpyruvate carboxykinase (GTP) K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF9228_0185 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bbv00630]
D HMPREF9228_1508 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D HMPREF9228_0679 acnA; aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HMPREF9228_1797 carboxyl transferase domain protein K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D HMPREF9228_1798 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D HMPREF9228_0826 haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HMPREF9228_1465 HAD hydrolase, family IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HMPREF9228_0590 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_1196 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_1416 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D HMPREF9228_0647 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF9228_1556 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00640 Propanoate metabolism [PATH:bbv00640]
D HMPREF9228_1084 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF9228_1083 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_1065 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF9228_1798 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D HMPREF9228_1797 carboxyl transferase domain protein K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D HMPREF9228_0840 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HMPREF9228_0839 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HMPREF9228_0865 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9228_0596 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9228_1556 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:bbv00650]
D HMPREF9228_1699 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9228_1048 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF9228_1049 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF9228_1065 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF9228_0404 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF9228_0403 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF9228_1697 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:bbv00660]
D HMPREF9228_0404 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF9228_0403 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF9228_1697 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D HMPREF9228_0840 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HMPREF9228_0839 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HMPREF9228_1849 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF9228_1848 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF9228_1413 putative 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bbv00562]
D HMPREF9228_0489 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HMPREF9228_0867 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bbv00190]
D HMPREF9228_1048 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF9228_1049 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF9228_0326 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF9228_0328 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF9228_0327 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF9228_0325 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HMPREF9228_0329 ATP synthase, delta/epsilon subunit, beta-sandwich domain protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF9228_0322 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF9228_0324 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF9228_0323 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF9228_0317 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D HMPREF9228_1853 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:bbv00710]
D HMPREF9228_0868 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF9228_0638 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF9228_0095 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF9228_0859 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF9228_1653 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HMPREF9228_0867 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF9228_0815 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF9228_0860 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HMPREF9228_0044 ppc; phosphoenolpyruvate carboxykinase (GTP) K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:bbv00720]
D HMPREF9228_0044 ppc; phosphoenolpyruvate carboxykinase (GTP) K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF9228_1048 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HMPREF9228_1049 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HMPREF9228_0839 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HMPREF9228_0840 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HMPREF9228_0768 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HMPREF9228_0679 acnA; aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D HMPREF9228_0200 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF9228_1106 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HMPREF9228_0897 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HMPREF9228_1083 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF9228_1084 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:bbv00680]
D HMPREF9228_1135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF9228_0044 ppc; phosphoenolpyruvate carboxykinase (GTP) K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF9228_0095 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF9228_1869 putative 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D HMPREF9228_1084 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF9228_1083 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF9228_0741 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9228_1624 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9228_0601 putative phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HMPREF9228_1620 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HMPREF9228_0478 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HMPREF9228_1571 HAD phosphoserine phosphatase-like hydrolase, family IB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:bbv00910]
D HMPREF9228_0013 Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF9228_0590 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_1196 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_0926 class II glutamine amidotransferase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HMPREF9228_0924 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HMPREF9228_0022 cah; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:bbv00920]
D HMPREF9228_0321 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HMPREF9228_1357 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bbv00061]
D HMPREF9228_1798 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D HMPREF9228_1796 MaoC-like protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D HMPREF9228_0132 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF9228_1496 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0429 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0941 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0771 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bbv00071]
D HMPREF9228_1496 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0429 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0941 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0771 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_1699 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:bbv00074]
D HMPREF9228_1798 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D HMPREF9228_0364 putative holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HMPREF9228_1796 MaoC-like protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:bbv00121]
D HMPREF9228_0895 linear amide C-N hydrolase, choloylglycine hydrolase family protein K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bbv00561]
D HMPREF9228_0647 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HMPREF9228_1159 HAD hydrolase, family IIA K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D HMPREF9228_0700 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF9228_1288 glycosyltransferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D HMPREF9228_0308 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF9228_1959 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:bbv00564]
D HMPREF9228_0340 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HMPREF9228_0700 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF9228_0073 hypothetical protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D HMPREF9228_0777 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HMPREF9228_0689 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HMPREF9228_0818 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:bbv00600]
D HMPREF9228_1601 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF9228_0010 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF9228_0182 BNR/Asp-box repeat protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF9228_0308 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF9228_1959 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D HMPREF9228_1542 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bbv00230]
D HMPREF9228_1100 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HMPREF9228_1648 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9228_0267 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF9228_1081 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF9228_1304 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HMPREF9228_1306 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HMPREF9228_1290 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D HMPREF9228_1292 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D HMPREF9228_1305 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HMPREF9228_1327 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D HMPREF9228_1328 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HMPREF9228_1291 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HMPREF9228_0494 putative adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HMPREF9228_0837 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF9228_0841 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF9228_1771 conserved hypothetical protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HMPREF9228_1548 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HMPREF9228_1519 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF9228_0769 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF9228_0416 Ham1 family protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HMPREF9228_0981 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D HMPREF9228_1079 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF9228_0399 class I glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF9228_1235 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HMPREF9228_1994 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF9228_1993 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF9228_1492 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF9228_1351 putative dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D HMPREF9228_0718 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF9228_1501 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HMPREF9228_1132 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HMPREF9228_0684 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D HMPREF9228_0335 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D HMPREF9228_0096 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HMPREF9228_1674 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF9228_0041 Ser/Thr phosphatase family protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D HMPREF9228_0847 histidine triad domain protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:bbv00240]
D HMPREF9228_1237 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF9228_1238 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF9228_0893 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF9228_0892 pyrI; aspartate carbamoyltransferase regulatory chain, allosteric domain protein K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D HMPREF9228_0891 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HMPREF9228_0888 dihydroorotate oxidase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D HMPREF9228_0889 oxidoreductase NAD-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D HMPREF9228_1408 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D HMPREF9228_0887 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HMPREF9228_0289 putative orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HMPREF9228_0890 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HMPREF9228_1236 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HMPREF9228_0775 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HMPREF9228_1829 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HMPREF9228_0957 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HMPREF9228_1858 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF9228_0973 putative cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HMPREF9228_1492 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF9228_1965 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D HMPREF9228_1994 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF9228_1993 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF9228_0191 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HMPREF9228_0717 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF9228_1614 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bbv00250]
D HMPREF9228_1810 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0875 aminotransferase, class I/II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0654 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HMPREF9228_0863 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF9228_0349 putative aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D HMPREF9228_1177 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HMPREF9228_1170 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HMPREF9228_0096 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HMPREF9228_0494 putative adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HMPREF9228_0893 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF9228_0892 pyrI; aspartate carbamoyltransferase regulatory chain, allosteric domain protein K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D HMPREF9228_0926 class II glutamine amidotransferase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HMPREF9228_0924 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HMPREF9228_0013 Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF9228_0590 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_1196 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_1237 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF9228_1238 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF9228_1372 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF9228_1304 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bbv00260]
D HMPREF9228_0157 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF9228_1831 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF9228_1830 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HMPREF9228_1145 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF9228_1287 Beta-eliminating lyase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D HMPREF9228_0647 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF9228_0741 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9228_1624 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9228_0601 putative phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HMPREF9228_1620 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HMPREF9228_0478 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HMPREF9228_1571 HAD phosphoserine phosphatase-like hydrolase, family IB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_1416 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D HMPREF9228_1358 putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D HMPREF9228_1129 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF9228_1953 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HMPREF9228_0813 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HMPREF9228_0812 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:bbv00270]
D HMPREF9228_1230 Cys/Met metabolism PLP-dependent enzyme K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF9228_1053 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF9228_1358 putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D HMPREF9228_0898 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HMPREF9228_0472 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HMPREF9228_1753 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HMPREF9228_1771 conserved hypothetical protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HMPREF9228_0227 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF9228_1355 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HMPREF9228_0157 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF9228_1831 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF9228_1830 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HMPREF9228_0321 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HMPREF9228_1357 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HMPREF9228_1042 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D HMPREF9228_0935 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF9228_1489 putative glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HMPREF9228_1810 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0875 aminotransferase, class I/II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0865 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9228_0596 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9228_1129 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF9228_0601 putative phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HMPREF9228_1620 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bbv00280]
D HMPREF9228_0935 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_1797 carboxyl transferase domain protein K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D HMPREF9228_1798 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bbv00290]
D HMPREF9228_1953 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HMPREF9228_1849 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF9228_1848 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF9228_1413 putative 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HMPREF9228_0404 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF9228_0403 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF9228_0107 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HMPREF9228_0108 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HMPREF9228_0474 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HMPREF9228_0935 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF9228_0863 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF9228_0185 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bbv00300]
D HMPREF9228_1831 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF9228_0157 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF9228_0179 dihydrodipicolinate synthetase family K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF9228_1388 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF9228_1389 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HMPREF9228_1507 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HMPREF9228_1180 argD; aminotransferase, acetylornithine/succinylornithine family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HMPREF9228_1817 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HMPREF9228_1221 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HMPREF9228_1834 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HMPREF9228_0631 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HMPREF9228_0608 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bbv00310]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:bbv00220]
D HMPREF9228_1179 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HMPREF9228_1177 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HMPREF9228_1170 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HMPREF9228_0590 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_1196 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_1237 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF9228_1238 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF9228_0013 Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF9228_1810 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0875 aminotransferase, class I/II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0863 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF9228_1182 argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D HMPREF9228_1181 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D HMPREF9228_1183 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D HMPREF9228_1180 argD; aminotransferase, acetylornithine/succinylornithine family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:bbv00330]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HMPREF9228_1036 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HMPREF9228_1812 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HMPREF9228_1144 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D HMPREF9228_1810 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0875 aminotransferase, class I/II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:bbv00340]
D HMPREF9228_0817 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D HMPREF9228_0816 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D HMPREF9228_0781 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D HMPREF9228_0588 bifunctional HisA/TrpF protein K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D HMPREF9228_0587 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D HMPREF9228_0780 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D HMPREF9228_0585 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D HMPREF9228_0584 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF9228_0583 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:bbv00350]
D HMPREF9228_1810 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0875 aminotransferase, class I/II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0584 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF9228_1699 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:bbv00360]
D HMPREF9228_1810 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0875 aminotransferase, class I/II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0584 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:bbv00380]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bbv00400]
D HMPREF9228_1754 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF9228_1755 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF9228_0959 aroB; 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D HMPREF9228_0958 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D HMPREF9228_1085 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HMPREF9228_0960 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HMPREF9228_0782 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HMPREF9228_0698 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D HMPREF9228_1468 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D HMPREF9228_0588 bifunctional HisA/TrpF protein K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D HMPREF9228_0813 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HMPREF9228_0812 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HMPREF9228_0309 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D HMPREF9228_0663 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D HMPREF9228_0664 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HMPREF9228_1810 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0875 aminotransferase, class I/II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0584 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00430 Taurine and hypotaurine metabolism [PATH:bbv00430]
D HMPREF9228_1083 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF9228_1084 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:bbv00450]
D HMPREF9228_1357 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HMPREF9228_1230 Cys/Met metabolism PLP-dependent enzyme K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF9228_1053 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF9228_0898 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HMPREF9228_0952 sufS; cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HMPREF9228_2014 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HMPREF9228_0024 putative alkyl hydroperoxide reductase F subunit K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HMPREF9228_1921 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bbv00460]
D HMPREF9228_1487 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1998 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_2002 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1477 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1266 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1715 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00470 D-Amino acid metabolism [PATH:bbv00470]
D HMPREF9228_1352 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF9228_0341 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF9228_1222 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HMPREF9228_0610 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF9228_1221 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HMPREF9228_1834 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:bbv00480]
D HMPREF9228_1489 putative glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HMPREF9228_1386 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF9228_0768 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HMPREF9228_0246 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF9228_0249 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:bbv00511]
D HMPREF9228_0182 BNR/Asp-box repeat protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF9228_1601 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF9228_0010 Beta galactosidase small chain K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF9228_1757 Beta galactosidase small chain K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D HMPREF9228_1756 hypothetical protein K12112 ebgC; evolved beta-galactosidase subunit beta
D HMPREF9228_0724 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF9228_0725 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF9228_1260 hypothetical protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D HMPREF9228_0580 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:bbv00542]
D HMPREF9228_1520 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bbv00541]
D HMPREF9228_0831 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF9228_1636 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF9228_1868 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HMPREF9228_1883 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF9228_1885 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF9228_1884 putative dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D HMPREF9228_1077 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:bbv00550]
D HMPREF9228_1838 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF9228_1728 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF9228_0613 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF9228_0610 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF9228_0631 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HMPREF9228_0341 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF9228_0608 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF9228_1206 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HMPREF9228_0855 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF9228_0609 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF9228_0612 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF9228_0606 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HMPREF9228_0067 penicillin-binding protein, transpeptidase domain protein K05364 pbpA; penicillin-binding protein A
D HMPREF9228_1550 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HMPREF9228_0261 Mur ligase middle domain protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HMPREF9228_0262 CobB/CobQ-like protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:bbv00552]
D HMPREF9228_0855 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF9228_1520 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF9228_1288 glycosyltransferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:bbv00572]
D HMPREF9228_1520 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF9228_0543 glycosyltransferase, group 2 family protein K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
C 00543 Exopolysaccharide biosynthesis [PATH:bbv00543]
D HMPREF9228_1520 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bbv00730]
D HMPREF9228_0557 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D HMPREF9228_0555 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HMPREF9228_0656 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF9228_1330 putative 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HMPREF9228_1167 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D HMPREF9228_0558 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF9228_0639 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D HMPREF9228_1674 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF9228_0903 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:bbv00740]
D HMPREF9228_1656 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HMPREF9228_0558 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF9228_1100 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:bbv00750]
D HMPREF9228_1043 putative pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D HMPREF9228_1136 oxidoreductase, aldo/keto reductase family protein K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D HMPREF9228_1620 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HMPREF9228_1145 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF9228_1349 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D HMPREF9228_1348 pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bbv00760]
D HMPREF9228_0654 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HMPREF9228_0653 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D HMPREF9228_0655 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D HMPREF9228_0414 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D HMPREF9228_1142 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HMPREF9228_1417 hydrolase, NUDIX family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D HMPREF9228_1067 nadE; NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D HMPREF9228_0690 competence/damage-inducible domain protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D HMPREF9228_0987 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D HMPREF9228_1952 transcriptional regulator, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D HMPREF9228_1154 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D HMPREF9228_0939 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HMPREF9228_0940 putative NAD(P)(+) transhydrogenase (AB-specific), alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HMPREF9228_0938 NAD(P) transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:bbv00770]
D HMPREF9228_0404 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF9228_0403 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF9228_0107 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HMPREF9228_0108 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HMPREF9228_0474 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HMPREF9228_1364 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D HMPREF9228_0409 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HMPREF9228_1104 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HMPREF9228_0364 putative holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HMPREF9228_0935 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:bbv00780]
D HMPREF9228_0132 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF9228_1801 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bbv00785]
D HMPREF9228_1412 biotin/lipoate A/B protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_1416 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:bbv00790]
D HMPREF9228_1546 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HMPREF9228_1544 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D HMPREF9228_1545 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HMPREF9228_1613 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF9228_0626 folC; bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HMPREF9228_0064 glutamine amidotransferase, class I K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
C 00670 One carbon pool by folate [PATH:bbv00670]
D HMPREF9228_1613 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF9228_0200 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF9228_1106 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HMPREF9228_0837 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF9228_0475 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF9228_1614 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HMPREF9228_0897 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HMPREF9228_1736 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D HMPREF9228_0208 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bbv00130]
D HMPREF9228_0459 putative 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D HMPREF9228_1625 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bbv00900]
D HMPREF9228_1330 putative 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HMPREF9228_1210 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D HMPREF9228_1770 putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D HMPREF9228_2008 putative 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D HMPREF9228_1110 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D HMPREF9228_1209 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D HMPREF9228_0636 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D HMPREF9228_0703 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF9228_1206 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HMPREF9228_0859 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:bbv00523]
D HMPREF9228_1883 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF9228_1885 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF9228_1884 putative dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D HMPREF9228_1885 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:bbv00946]
D HMPREF9228_1487 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1998 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_2002 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1477 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1266 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1715 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D HMPREF9228_0250 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:bbv00332]
D HMPREF9228_1812 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HMPREF9228_1144 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:bbv00261]
D HMPREF9228_0157 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF9228_0179 dihydrodipicolinate synthetase family K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF9228_1388 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF9228_1389 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bbv00521]
D HMPREF9228_1538 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0620 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0172 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_1648 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF9228_0489 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HMPREF9228_1883 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF9228_1885 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF9228_1884 putative dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HMPREF9228_1538 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0620 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF9228_0172 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:bbv00525]
D HMPREF9228_1883 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF9228_1885 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:bbv00401]
D HMPREF9228_0664 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HMPREF9228_1810 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0875 aminotransferase, class I/II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0584 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D HMPREF9228_0782 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D HMPREF9228_0132 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bbv00999]
D HMPREF9228_0472 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HMPREF9228_1487 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1998 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_2002 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1477 glycosyl hydrolase family 3 N-terminal domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1266 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D HMPREF9228_1715 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D HMPREF9228_0582 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:bbv00625]
D HMPREF9228_1699 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF9228_1307 aldehyde dehydrogenase (NAD) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HMPREF9228_0883 HAD hydrolase, family IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D HMPREF9228_0481 HAD hydrolase, family IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D HMPREF9228_0883 HAD hydrolase, family IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D HMPREF9228_0481 HAD hydrolase, family IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:bbv00626]
D HMPREF9228_1699 aldehyde dehydrogenase (NAD) family protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bbv03020]
D HMPREF9228_1398 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF9228_1397 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF9228_1669 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF9228_0473 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bbv03010]
D HMPREF9228_1105 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF9228_0773 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF9228_1689 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF9228_0976 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF9228_1678 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF9228_0268 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF9228_1283 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF9228_1681 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF9228_1708 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF9228_1696 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HMPREF9228_1670 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF9228_1284 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF9228_1671 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF9228_1682 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF9228_1313 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF9228_0374 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF9228_0394 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF9228_1686 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HMPREF9228_0270 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF9228_1691 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HMPREF9228_0932 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF9228_1804 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF9228_1692 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF9228_1695 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF9228_1694 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF9228_1683 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF9228_1680 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF9228_1742 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF9228_0271 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF9228_1743 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF9228_1805 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF9228_1709 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF9228_1685 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HMPREF9228_1676 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF9228_1688 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF9228_1668 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF9228_1679 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF9228_0424 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF9228_0644 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF9228_1815 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF9228_1690 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF9228_1693 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HMPREF9228_1684 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF9228_0936 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D HMPREF9228_1814 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF9228_1311 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF9228_1776 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF9228_1687 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF9228_1677 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF9228_1314 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF9228_1529 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF9228_0406 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF9228_1316 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF9228_1729 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF9228_1312 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF9228_2021 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF9228_0643 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF9228_1315 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF9228_1672 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF9228_0573 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9228_1948 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9228_1951 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9228_1947 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9228_1950 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9228_0574 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9228_0575 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9228_1946 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9228_1949 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bbv00970]
D HMPREF9228_0015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9228_1925 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9228_1073 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9228_1074 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9228_1342 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9228_0336 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9228_1054 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9228_1055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9228_1499 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9228_0752 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF9228_0765 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF9228_1539 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF9228_1559 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF9228_0852 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF9228_0210 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF9228_1082 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF9228_1561 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF9228_0209 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF9228_0367 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9228_0093 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9228_0849 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9228_0853 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9228_1789 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9228_1286 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF9228_0016 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF9228_0087 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9228_0418 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9228_0947 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9228_1099 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9228_1131 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9228_0251 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF9228_0272 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF9228_0320 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9228_1530 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9228_1730 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9228_1558 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF9228_1627 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF9228_1088 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF9228_0833 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF9228_0233 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9228_1643 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9228_1664 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9228_1721 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9228_1731 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9228_0419 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9228_2005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9228_1809 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF9228_1732 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF9228_1212 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9228_0850 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9228_1787 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9228_0851 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9228_1788 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9228_0208 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF9228_0295 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HMPREF9228_0296 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HMPREF9228_0294 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HMPREF9228_0964 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF9228_0521 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF9228_0560 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF9228_0848 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF9228_1644 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF9228_0398 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF9228_1921 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF9228_0475 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF9228_0311 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF9228_0744 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF9228_1453 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF9228_1626 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF9228_1835 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF9228_1513 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF9228_0520 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF9228_1186 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF9228_1185 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF9228_1161 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF9228_0050 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bbv03060]
D HMPREF9228_1675 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF9228_1808 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF9228_0866 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF9228_0842 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF9228_2019 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF9228_0697 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF9228_0396 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF9228_0188 srpB; Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF9228_0255 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF9228_0425 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF9228_0566 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bbv04122]
D HMPREF9228_0656 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 03050 Proteasome
D HMPREF9228_0480 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:bbv03018]
D HMPREF9228_1816 S1 RNA binding domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HMPREF9228_1135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF9228_0375 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF9228_1356 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HMPREF9228_0300 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HMPREF9228_1387 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF9228_0125 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF9228_0506 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF9228_1853 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HMPREF9228_2010 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bbv03030]
D HMPREF9228_1234 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF9228_0569 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF9228_0144 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF9228_0192 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF9228_0747 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF9228_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF9228_0260 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF9228_1350 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF9228_0269 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_1512 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_1652 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HMPREF9228_0426 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF9228_1198 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bbv03410]
D HMPREF9228_0313 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF9228_0503 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF9228_1400 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HMPREF9228_0673 putative exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF9228_0810 apurinic endonuclease (APN1) K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HMPREF9228_1198 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bbv03420]
D HMPREF9228_1137 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF9228_1253 putative excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF9228_0874 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF9228_1103 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HMPREF9228_0873 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HMPREF9228_1216 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9228_0980 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9228_1391 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9228_1198 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bbv03430]
D HMPREF9228_1216 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9228_0980 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9228_1391 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9228_1493 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF9228_1494 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF9228_0269 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_1512 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_0569 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF9228_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF9228_0144 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF9228_0747 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF9228_0192 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF9228_1234 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF9228_1198 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bbv03440]
D HMPREF9228_0269 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_1512 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HMPREF9228_1207 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF9228_0145 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF9228_0693 recA; RecA protein K03553 recA; recombination protein RecA
D HMPREF9228_0844 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF9228_0843 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF9228_0845 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HMPREF9228_0154 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9228_0994 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9228_1775 putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9228_0216 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9228_0035 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9228_0569 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF9228_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF9228_0144 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF9228_0747 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF9228_0192 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF9228_1234 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF9228_0477 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:bbv03250]
D HMPREF9228_0719 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
D HMPREF9228_0072 peptidase, S9A/B/C family, catalytic domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bbv02010]
D HMPREF9228_1985 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF9228_0118 ABC transporter, solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF9228_0119 ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF9228_0120 ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF9228_1957 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF9228_1907 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF9228_1956 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_1906 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_0388 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_1905 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_1955 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_0389 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_0305 ABC transporter, solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D HMPREF9228_0306 ABC transporter, permease protein K10189 lacF; lactose/L-arabinose transport system permease protein
D HMPREF9228_0307 ABC transporter, permease protein K10190 lacG; lactose/L-arabinose transport system permease protein
D HMPREF9228_0726 ABC transporter, solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D HMPREF9228_0727 ABC transporter, permease protein K17245 chiF; putative chitobiose transport system permease protein
D HMPREF9228_0728 ABC transporter, permease protein K17246 chiG; putative chitobiose transport system permease protein
D HMPREF9228_1979 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF9228_1456 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF9228_1981 branched-chain amino acid ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D HMPREF9228_1457 branched-chain amino acid ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D HMPREF9228_1458 ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HMPREF9228_1980 ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HMPREF9228_1455 RbsD/FucU transport family protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D HMPREF9228_0040 ABC transporter, solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D HMPREF9228_0039 ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D HMPREF9228_0038 ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D HMPREF9228_1749 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF9228_1748 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF9228_1747 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF9228_1746 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF9228_0524 ABC transporter, substrate-binding protein, family 3 K10005 gluB; glutamate transport system substrate-binding protein
D HMPREF9228_0743 ABC transporter, substrate-binding protein, family 3 K10005 gluB; glutamate transport system substrate-binding protein
D HMPREF9228_0525 ABC transporter, permease protein K10006 gluC; glutamate transport system permease protein
D HMPREF9228_0526 ABC transporter, permease protein K10007 gluD; glutamate transport system permease protein
D HMPREF9228_0523 ABC transporter, ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF9228_1840 ABC transporter, substrate-binding protein, family 3 K16957 tcyK; L-cystine transport system substrate-binding protein
D HMPREF9228_1841 ABC transporter, permease protein K16958 tcyL; L-cystine transport system permease protein
D HMPREF9228_1842 ABC transporter, permease protein K16959 tcyM; L-cystine transport system permease protein
D HMPREF9228_1844 ABC transporter, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF9228_1526 receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF9228_1525 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF9228_1524 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF9228_1523 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF9228_1522 ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF9228_1071 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF9228_1069 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D HMPREF9228_1070 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF9228_0923 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_1336 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_0669 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_0670 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF9228_0671 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF9228_0672 putative phosphonate C-P lyase system protein PhnK K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF9228_1914 ABC transporter, substrate-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D HMPREF9228_1917 ABC transporter, permease protein K13890 gsiC; glutathione transport system permease protein
D HMPREF9228_1916 ABC transporter, permease protein K13891 gsiD; glutathione transport system permease protein
D HMPREF9228_1915 putative phosphonate C-P lyase system protein PhnK K13892 gsiA; glutathione transport system ATP-binding protein
D HMPREF9228_1800 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D HMPREF9228_1202 ABC transporter, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D HMPREF9228_1471 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9228_1188 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9228_0758 hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D HMPREF9228_0757 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D HMPREF9228_0759 ABC transporter, ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D HMPREF9228_1379 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF9228_1380 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF9228_1900 ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_1899 ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_1929 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_1475 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_1474 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_1928 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_0432 ABC transporter, ATP-binding protein K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
C 02060 Phosphotransferase system (PTS) [PATH:bbv02060]
D HMPREF9228_0196 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HMPREF9228_0194 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D HMPREF9228_1647 phosphotransferase system, EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D HMPREF9228_1989 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HMPREF9228_1988 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HMPREF9228_1987 putative sugar-specific permease, SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF9228_0486 phosphotransferase system, EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF9228_0485 PTS system, Fru family, IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
C 03070 Bacterial secretion system [PATH:bbv03070]
D HMPREF9228_1808 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF9228_0866 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF9228_1675 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF9228_0842 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF9228_2019 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF9228_0697 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF9228_0255 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF9228_0396 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bbv02020]
D HMPREF9228_1751 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF9228_1622 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF9228_1750 response regulator receiver domain protein K07776 regX3; two-component system, OmpR family, response regulator RegX3
D HMPREF9228_1749 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF9228_0089 trypsin K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D HMPREF9228_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF9228_0277 response regulator receiver domain protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D HMPREF9228_0136 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF9228_0137 hypothetical protein K12510 tadB; tight adherence protein B
D HMPREF9228_0258 putative protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D HMPREF9228_0257 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D HMPREF9228_0590 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_1196 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_1411 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF9228_1612 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D HMPREF9228_0448 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bbv02024]
D HMPREF9228_1355 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HMPREF9228_0782 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HMPREF9228_1754 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF9228_1755 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF9228_0343 ABC transporter, solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HMPREF9228_0162 ABC transporter, solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HMPREF9228_0345 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D HMPREF9228_0164 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D HMPREF9228_0344 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D HMPREF9228_0163 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D HMPREF9228_0346 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D HMPREF9228_0165 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D HMPREF9228_1526 receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF9228_1525 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF9228_1524 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF9228_1523 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF9228_1522 ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF9228_1394 ATPase family associated with various cellular activities (AAA) K20276 bapA; large repetitive protein
D HMPREF9228_1496 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0429 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0941 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0771 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_1411 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF9228_0923 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_1336 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_0669 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_0670 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF9228_0671 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF9228_0672 putative phosphonate C-P lyase system protein PhnK K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF9228_1363 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9228_0175 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9228_1265 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9228_0312 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9228_1362 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9228_0176 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9228_1264 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9228_1361 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF9228_1263 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF9228_0177 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF9228_1262 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF9228_0178 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF9228_2019 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF9228_1808 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF9228_0866 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF9228_1675 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF9228_0842 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF9228_0697 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF9228_0255 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF9228_0396 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D HMPREF9228_1979 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF9228_1456 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
D HMPREF9228_0705 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HMPREF9228_1135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bbv01501]
D HMPREF9228_1141 glycosyl hydrolase family 3 N-terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HMPREF9228_0923 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_1336 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_0669 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_0670 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF9228_0671 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF9228_0672 putative phosphonate C-P lyase system protein PhnK K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF9228_0250 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D HMPREF9228_0606 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bbv01502]
D HMPREF9228_0341 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF9228_1352 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF9228_0608 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF9228_0609 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF9228_0612 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D HMPREF9228_0719 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bbv01000]
C 01001 Protein kinases [BR:bbv01001]
D HMPREF9228_0066 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF9228_0065 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF9228_1393 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF9228_0391 HipA-like C-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HMPREF9228_1423 chain length determinant protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D HMPREF9228_1751 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF9228_1622 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF9228_0510 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D HMPREF9228_1125 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bbv01009]
D HMPREF9228_0069 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D HMPREF9228_0478 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HMPREF9228_1571 HAD phosphoserine phosphatase-like hydrolase, family IB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:bbv01002]
D HMPREF9228_0566 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HMPREF9228_0961 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HMPREF9228_1919 peptidase C1-like family K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D HMPREF9228_1766 peptidase C1-like family K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D HMPREF9228_1767 peptidase C1-like family K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D HMPREF9228_1769 putative pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D HMPREF9228_1079 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF9228_0399 class I glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF9228_0974 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D HMPREF9228_1378 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9228_1579 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9228_1617 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9228_1618 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9228_1619 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9228_1304 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HMPREF9228_0926 class II glutamine amidotransferase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HMPREF9228_1372 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF9228_0895 linear amide C-N hydrolase, choloylglycine hydrolase family protein K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D HMPREF9228_0115 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9228_0152 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9228_0199 pepD; dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D HMPREF9228_0252 peptidase, C69 family K08659 pepDA; dipeptidase [EC:3.4.-.-]
D HMPREF9228_1386 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF9228_1511 peptidase family M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D HMPREF9228_1817 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HMPREF9228_1509 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HMPREF9228_0625 peptidase, M24 family K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HMPREF9228_1547 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF9228_0092 peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HMPREF9228_0089 trypsin K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D HMPREF9228_0072 peptidase, S9A/B/C family, catalytic domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D HMPREF9228_1414 peptidase, S9A/B/C family, catalytic domain protein K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D HMPREF9228_1550 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HMPREF9228_1057 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HMPREF9228_1058 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HMPREF9228_1214 Lon protease (S16) C-terminal proteolytic domain protein K07177 K07177; Lon-like protease
D HMPREF9228_0598 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D HMPREF9228_0425 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF9228_0988 peptidase family S51 K05995 pepE; dipeptidase E [EC:3.4.13.21]
D HMPREF9228_1772 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:bbv01003]
D HMPREF9228_1288 glycosyltransferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D HMPREF9228_0920 glgA; glycogen synthase, Corynebacterium family K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D HMPREF9228_0028 glycosyltransferase, group 1 family protein K21011 pelF; polysaccharide biosynthesis protein PelF
D HMPREF9228_1520 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF9228_0543 glycosyltransferase, group 2 family protein K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bbv01005]
D HMPREF9228_1520 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bbv01011]
D HMPREF9228_1838 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF9228_1728 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF9228_0613 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF9228_0610 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF9228_0631 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HMPREF9228_0341 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF9228_1352 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF9228_1222 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HMPREF9228_0609 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF9228_0612 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF9228_0855 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF9228_2013 putative integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D HMPREF9228_0606 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HMPREF9228_0067 penicillin-binding protein, transpeptidase domain protein K05364 pbpA; penicillin-binding protein A
D HMPREF9228_1550 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HMPREF9228_1378 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9228_1579 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9228_1617 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9228_1618 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9228_1619 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF9228_0115 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9228_0152 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF9228_0962 YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:bbv01004]
D HMPREF9228_1796 MaoC-like protein K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D HMPREF9228_0132 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF9228_1542 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D HMPREF9228_1496 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0429 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0941 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0771 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0700 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:bbv01008]
C 01006 Prenyltransferases [BR:bbv01006]
D HMPREF9228_0703 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF9228_1206 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HMPREF9228_0686 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HMPREF9228_1625 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:bbv01007]
D HMPREF9228_0208 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF9228_1861 putative glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HMPREF9228_1161 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF9228_0050 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF9228_0398 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF9228_1835 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF9228_1921 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF9228_1453 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF9228_0311 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF9228_0744 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF9228_1626 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF9228_0521 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF9228_0520 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF9228_0560 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF9228_1644 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF9228_1513 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF9228_0848 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF9228_0964 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF9228_1186 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF9228_1185 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF9228_1810 aminotransferase, class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0875 aminotransferase, class I/II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HMPREF9228_0863 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF9228_0584 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HMPREF9228_1053 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF9228_1180 argD; aminotransferase, acetylornithine/succinylornithine family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HMPREF9228_0935 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF9228_1620 putative phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bbv00194]
D HMPREF9228_0329 ATP synthase, delta/epsilon subunit, beta-sandwich domain protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF9228_0328 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF9228_0327 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF9228_0326 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF9228_0325 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HMPREF9228_0324 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF9228_0323 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF9228_0322 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bbv03000]
D HMPREF9228_0227 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF9228_1030 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D HMPREF9228_1279 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D HMPREF9228_0548 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF9228_1459 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF9228_1602 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF9228_0008 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF9228_1719 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF9228_0193 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF9228_1978 sugar-binding domain protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF9228_1663 hypothetical protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D HMPREF9228_0112 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D HMPREF9228_1259 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D HMPREF9228_0101 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D HMPREF9228_0105 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D HMPREF9228_1986 UbiC transcription regulator-associated domain protein K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D HMPREF9228_1476 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D HMPREF9228_0128 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D HMPREF9228_1320 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HMPREF9228_1326 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HMPREF9228_1411 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HMPREF9228_1801 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HMPREF9228_0645 putative sugar diacid recognition K02647 cdaR; carbohydrate diacid regulator
D HMPREF9228_0983 hypothetical protein K07727 K07727; putative transcriptional regulator
D HMPREF9228_1646 PRD domain protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D HMPREF9228_1124 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D HMPREF9228_1120 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D HMPREF9228_0287 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D HMPREF9228_1595 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF9228_2015 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF9228_1111 CarD-like protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D HMPREF9228_1178 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D HMPREF9228_1703 ROK family protein K02565 nagC; N-acetylglucosamine repressor
D HMPREF9228_0858 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D HMPREF9228_0903 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D HMPREF9228_0600 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D HMPREF9228_0603 mraZ; protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:bbv03021]
D HMPREF9228_1669 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF9228_1398 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF9228_1397 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF9228_0473 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF9228_0705 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HMPREF9228_0632 Sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HMPREF9228_1660 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF9228_1239 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF9228_1807 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF9228_1127 prokaryotic transcription elongation factor, GreA/GreB domain protein K03624 greA; transcription elongation factor GreA
D HMPREF9228_0300 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bbv03019]
D HMPREF9228_1816 S1 RNA binding domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HMPREF9228_0405 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF9228_1387 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF9228_1518 exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HMPREF9228_1356 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HMPREF9228_1135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF9228_0375 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF9228_0300 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HMPREF9228_0125 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF9228_0506 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF9228_1853 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HMPREF9228_2010 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D HMPREF9228_0870 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D HMPREF9228_0828 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D HMPREF9228_0593 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:bbv03011]
D HMPREF9228_1105 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF9228_0773 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF9228_1689 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF9228_0976 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF9228_1678 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF9228_0268 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF9228_1283 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF9228_1681 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF9228_1708 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF9228_1696 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HMPREF9228_1670 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF9228_1284 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF9228_1671 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF9228_1682 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF9228_1313 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF9228_0374 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF9228_0394 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF9228_1686 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HMPREF9228_0270 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF9228_1691 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HMPREF9228_0932 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF9228_1804 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF9228_1692 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF9228_1695 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF9228_1694 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF9228_1683 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF9228_1680 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF9228_0271 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF9228_1743 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF9228_1805 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF9228_1742 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF9228_1709 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF9228_1685 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HMPREF9228_1676 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF9228_1688 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF9228_1668 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF9228_1679 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF9228_0424 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF9228_0644 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF9228_1815 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF9228_1690 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF9228_1693 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HMPREF9228_1684 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF9228_1814 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF9228_1311 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF9228_1776 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF9228_1687 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF9228_1677 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF9228_1314 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF9228_1529 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF9228_0406 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF9228_1316 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF9228_1729 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF9228_1312 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF9228_2021 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF9228_0643 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF9228_1315 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF9228_1672 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HMPREF9228_0936 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D HMPREF9228_0575 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9228_1946 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9228_1949 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9228_0573 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9228_1948 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9228_1951 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9228_1947 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9228_1950 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9228_0574 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bbv03009]
D HMPREF9228_0405 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF9228_1518 exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HMPREF9228_1813 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D HMPREF9228_1660 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF9228_1239 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF9228_1807 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF9228_2007 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HMPREF9228_0594 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HMPREF9228_1774 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HMPREF9228_0946 RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HMPREF9228_2017 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF9228_0604 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HMPREF9228_1924 S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HMPREF9228_1157 putative ribosomal RNA large subunit methyltransferase J K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D HMPREF9228_1972 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HMPREF9228_1859 rlmH; rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HMPREF9228_0778 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HMPREF9228_1371 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HMPREF9228_0835 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HMPREF9228_0567 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF9228_0750 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HMPREF9228_0392 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D HMPREF9228_1816 S1 RNA binding domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HMPREF9228_0963 RNAse H domain protein, YqgF family K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HMPREF9228_0834 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D HMPREF9228_0595 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D HMPREF9228_1521 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF9228_0718 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF9228_1658 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D HMPREF9228_1076 iojap-like protein K09710 ybeB; ribosome-associated protein
D HMPREF9228_0943 ybeY; translation metalloprotein YbeY K07042 ybeY; probable rRNA maturation factor
D HMPREF9228_0539 putative RNA-binding protein, YhbY family K07574 yhbY; RNA-binding protein
D HMPREF9228_1031 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D HMPREF9228_0407 putative ACR, COG1399 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:bbv03016]
D HMPREF9228_0208 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF9228_1513 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF9228_1453 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF9228_0744 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF9228_1921 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF9228_1835 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF9228_1626 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF9228_0521 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF9228_0964 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF9228_0560 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF9228_0848 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF9228_1644 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF9228_0398 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF9228_0311 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF9228_0520 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF9228_1186 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF9228_1185 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF9228_1161 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF9228_0050 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF9228_0616 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HMPREF9228_0945 histidine triad domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF9228_0900 methyltransferase domain protein K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D HMPREF9228_1560 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HMPREF9228_1667 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HMPREF9228_1657 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HMPREF9228_0656 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF9228_1521 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF9228_0686 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HMPREF9228_2020 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HMPREF9228_0695 rnpB; Bacterial RNase P class A K01978 rnpB; M1 RNA
D HMPREF9228_0415 rph; tRNA nucleotidyltransferase K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HMPREF9228_1062 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D HMPREF9228_1541 ATP-binding cassette protein, ChvD family K06020 ettA; energy-dependent translational throttle protein EttA
D HMPREF9228_1861 putative glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D HMPREF9228_0637 YbaK/EbsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HMPREF9228_1960 cytidine and deoxycytidylate deaminase zinc-binding region K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HMPREF9228_0685 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HMPREF9228_1773 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HMPREF9228_1401 putative RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HMPREF9228_1187 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D HMPREF9228_1371 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HMPREF9228_0088 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HMPREF9228_1549 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HMPREF9228_0751 putative glycoprotease GCP K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HMPREF9228_0748 hydrolase, P-loop family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HMPREF9228_0375 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bbv03012]
D HMPREF9228_1659 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF9228_0642 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF9228_0774 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF9228_1281 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF9228_1282 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HMPREF9228_1528 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HMPREF9228_0776 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HMPREF9228_1527 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HMPREF9228_1138 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HMPREF9228_1673 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HMPREF9228_1240 efp; translation elongation factor P K02356 efp; elongation factor P
D HMPREF9228_1381 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:bbv03110]
D HMPREF9228_1863 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HMPREF9228_0514 ATPase family associated with various cellular activities (AAA) K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HMPREF9228_1056 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HMPREF9228_0125 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF9228_0506 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF9228_0127 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D HMPREF9228_0857 putative chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF9228_0126 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF9228_0074 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D HMPREF9228_1733 groS; chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF9228_1547 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF9228_0322 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF9228_0719 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF9228_1420 trxA; thioredoxin K03671 TXN; thioredoxin
D HMPREF9228_0334 hypothetical protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:bbv04131]
D HMPREF9228_0724 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF9228_0725 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF9228_0638 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF9228_0741 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9228_1624 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9228_1101 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF9228_1778 transporter, major facilitator family protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:bbv04121]
D HMPREF9228_0490 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:bbv03051]
D HMPREF9228_0480 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
D HMPREF9228_0491 pafA; proteasome accessory factor PafA K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D HMPREF9228_0488 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:bbv03032]
D HMPREF9228_1652 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HMPREF9228_0227 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF9228_0492 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D HMPREF9228_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF9228_0260 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF9228_1350 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF9228_0269 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_1512 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_0569 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF9228_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF9228_0747 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF9228_0192 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF9228_1234 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF9228_0144 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF9228_0426 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF9228_1198 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF9228_0713 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF9228_0006 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF9228_0706 DNA gyrase, B subunit, C-terminal domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF9228_0005 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF9228_0190 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bbv03036]
D HMPREF9228_0227 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF9228_0405 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF9228_0492 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D HMPREF9228_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF9228_0019 ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D HMPREF9228_0627 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D HMPREF9228_0650 ScpA/B protein K05896 scpA; segregation and condensation protein A
D HMPREF9228_0651 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D HMPREF9228_1380 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF9228_0606 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HMPREF9228_0688 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HMPREF9228_1123 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HMPREF9228_0614 POTRA domain protein, FtsQ-type K03589 ftsQ; cell division protein FtsQ
D HMPREF9228_0611 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HMPREF9228_1379 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF9228_0562 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF9228_0563 hypothetical protein K09772 sepF; cell division inhibitor SepF
D HMPREF9228_2016 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF9228_0649 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF9228_1566 hypothetical protein K03496 parA; chromosome partitioning protein
D HMPREF9228_1595 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF9228_2015 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF9228_2017 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF9228_0668 phage integrase SAM-like domain protein K03733 xerC; integrase/recombinase XerC
D HMPREF9228_0648 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D HMPREF9228_1197 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HMPREF9228_0687 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D HMPREF9228_0471 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D HMPREF9228_0869 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:bbv03400]
D HMPREF9228_0363 6-O-methylguanine DNA methyltransferase, DNA binding domain protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HMPREF9228_0503 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF9228_1400 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HMPREF9228_0313 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF9228_0717 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF9228_0673 putative exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF9228_0810 apurinic endonuclease (APN1) K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HMPREF9228_1198 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF9228_1253 putative excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF9228_0874 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF9228_1103 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HMPREF9228_0873 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HMPREF9228_1216 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9228_0980 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9228_1391 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF9228_1398 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF9228_1397 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF9228_1669 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF9228_0473 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF9228_1137 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF9228_1493 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF9228_1494 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF9228_0569 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF9228_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF9228_0747 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF9228_0192 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF9228_1234 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF9228_0144 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF9228_0269 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_1512 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_1504 vsr; DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D HMPREF9228_0693 recA; RecA protein K03553 recA; recombination protein RecA
D HMPREF9228_0844 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF9228_0843 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF9228_0845 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HMPREF9228_0477 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HMPREF9228_1655 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HMPREF9228_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HMPREF9228_0154 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9228_0994 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9228_1775 putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9228_0216 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9228_0035 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF9228_1207 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF9228_0145 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF9228_1153 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HMPREF9228_1445 cas1; CRISPR-associated endonuclease Cas1, DVULG subtype K15342 cas1; CRISP-associated protein Cas1
D HMPREF9228_0713 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF9228_0006 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF9228_0706 DNA gyrase, B subunit, C-terminal domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF9228_0005 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF9228_0190 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HMPREF9228_0492 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D HMPREF9228_1356 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HMPREF9228_1724 ImpB/MucB/SamB family protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HMPREF9228_1303 ImpB/MucB/SamB family protein K03502 umuC; DNA polymerase V
D HMPREF9228_0598 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D HMPREF9228_0694 recX; regulatory protein RecX K03565 recX; regulatory protein
D HMPREF9228_0709 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D HMPREF9228_1854 hydrolase, NUDIX family K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D HMPREF9228_1994 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF9228_1993 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:bbv03029]
D HMPREF9228_1659 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF9228_0642 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF9228_0774 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF9228_1281 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF9228_1282 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HMPREF9228_1161 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF9228_0744 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF9228_0521 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF9228_0560 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HMPREF9228_1835 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF9228_0295 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HMPREF9228_0296 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HMPREF9228_0294 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HMPREF9228_0269 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_1512 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF9228_0125 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF9228_0126 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF9228_0506 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF9228_1733 groS; chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF9228_0127 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D HMPREF9228_0857 putative chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF9228_0656 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF9228_1197 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HMPREF9228_2019 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bbv02000]
D HMPREF9228_1900 ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_1899 ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_1929 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_1475 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_1474 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_1928 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF9228_0432 ABC transporter, ATP-binding protein K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D HMPREF9228_0400 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D HMPREF9228_0343 ABC transporter, solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HMPREF9228_0162 ABC transporter, solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HMPREF9228_0345 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D HMPREF9228_0164 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D HMPREF9228_0344 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D HMPREF9228_0163 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D HMPREF9228_0346 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D HMPREF9228_0165 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D HMPREF9228_1204 NMT1/THI5-like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D HMPREF9228_0422 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D HMPREF9228_0421 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D HMPREF9228_1985 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF9228_1939 ABC transporter, solute-binding protein K25086 musE; maltose transport system substrate-binding protein
D HMPREF9228_1937 ABC transporter, permease protein K25087 musF; maltose transport system permease protein
D HMPREF9228_1936 ABC transporter, permease protein K25088 musG; maltose transport system permease protein
D HMPREF9228_0118 ABC transporter, solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF9228_0119 ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF9228_0120 ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF9228_1957 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF9228_1907 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF9228_1956 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_1906 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_0388 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_1905 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_1955 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_0389 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF9228_0726 ABC transporter, solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D HMPREF9228_0727 ABC transporter, permease protein K17245 chiF; putative chitobiose transport system permease protein
D HMPREF9228_0728 ABC transporter, permease protein K17246 chiG; putative chitobiose transport system permease protein
D HMPREF9228_0305 ABC transporter, solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D HMPREF9228_0306 ABC transporter, permease protein K10189 lacF; lactose/L-arabinose transport system permease protein
D HMPREF9228_0307 ABC transporter, permease protein K10190 lacG; lactose/L-arabinose transport system permease protein
D HMPREF9228_1979 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF9228_1456 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF9228_1981 branched-chain amino acid ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D HMPREF9228_1457 branched-chain amino acid ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D HMPREF9228_1458 ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HMPREF9228_1980 ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HMPREF9228_0040 ABC transporter, solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D HMPREF9228_0039 ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D HMPREF9228_0038 ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D HMPREF9228_1242 TIGR00245 family protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D HMPREF9228_1241 ABC transporter, ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D HMPREF9228_1718 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9228_0355 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9228_0387 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9228_1642 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9228_1366 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9228_1365 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9228_1763 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9228_0434 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9228_1604 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9228_1341 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF9228_1369 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF9228_1640 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF9228_1717 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF9228_1762 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF9228_0356 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF9228_0435 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF9228_0437 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF9228_1639 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF9228_1368 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF9228_1716 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF9228_1761 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF9228_0357 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF9228_1873 sugar-binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D HMPREF9228_1870 branched-chain amino acid ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D HMPREF9228_1871 branched-chain amino acid ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D HMPREF9228_1872 ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF9228_1749 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF9228_1748 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF9228_1747 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF9228_1746 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF9228_0524 ABC transporter, substrate-binding protein, family 3 K10005 gluB; glutamate transport system substrate-binding protein
D HMPREF9228_0743 ABC transporter, substrate-binding protein, family 3 K10005 gluB; glutamate transport system substrate-binding protein
D HMPREF9228_0525 ABC transporter, permease protein K10006 gluC; glutamate transport system permease protein
D HMPREF9228_0526 ABC transporter, permease protein K10007 gluD; glutamate transport system permease protein
D HMPREF9228_0523 ABC transporter, ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF9228_1840 ABC transporter, substrate-binding protein, family 3 K16957 tcyK; L-cystine transport system substrate-binding protein
D HMPREF9228_1841 ABC transporter, permease protein K16958 tcyL; L-cystine transport system permease protein
D HMPREF9228_1842 ABC transporter, permease protein K16959 tcyM; L-cystine transport system permease protein
D HMPREF9228_1844 ABC transporter, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF9228_1526 receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF9228_1525 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF9228_1524 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF9228_1523 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF9228_1522 ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF9228_1071 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF9228_1069 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D HMPREF9228_1070 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF9228_1035 ABC transporter, substrate-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HMPREF9228_1375 ABC transporter, substrate-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HMPREF9228_1376 ABC transporter, substrate-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HMPREF9228_1374 ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HMPREF9228_1032 ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HMPREF9228_1033 ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HMPREF9228_1034 ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF9228_1373 ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF9228_0923 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_1336 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_0669 ABC transporter, substrate-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF9228_0670 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF9228_0671 ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D HMPREF9228_0672 putative phosphonate C-P lyase system protein PhnK K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF9228_1914 ABC transporter, substrate-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D HMPREF9228_1917 ABC transporter, permease protein K13890 gsiC; glutathione transport system permease protein
D HMPREF9228_1916 ABC transporter, permease protein K13891 gsiD; glutathione transport system permease protein
D HMPREF9228_1915 putative phosphonate C-P lyase system protein PhnK K13892 gsiA; glutathione transport system ATP-binding protein
D HMPREF9228_1363 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9228_0175 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9228_1265 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9228_0312 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF9228_1362 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9228_0176 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9228_1264 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF9228_1361 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF9228_1263 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF9228_0177 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF9228_1262 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF9228_0178 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HMPREF9228_0919 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HMPREF9228_1800 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D HMPREF9228_1202 ABC transporter, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D HMPREF9228_1472 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D HMPREF9228_1471 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9228_1188 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF9228_1189 cobalt ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF9228_0540 cobalt ABC transporter, ATP-binding protein K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D HMPREF9228_1190 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D HMPREF9228_0495 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D HMPREF9228_1107 ABC transporter, substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D HMPREF9228_1309 ABC transporter, substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D HMPREF9228_1109 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D HMPREF9228_1108 ABC transporter, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D HMPREF9228_0759 ABC transporter, ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D HMPREF9228_0758 hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D HMPREF9228_0757 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D HMPREF9228_0995 ABC-2 type transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D HMPREF9228_0996 hypothetical protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D HMPREF9228_0997 ABC transporter, ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D HMPREF9228_1379 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D HMPREF9228_1380 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF9228_1882 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF9228_1551 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF9228_0292 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF9228_0276 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9228_0291 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9228_1552 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9228_1149 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9228_1881 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF9228_1932 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9228_1609 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9228_1610 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9228_0658 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9228_0666 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9228_0978 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9228_0238 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9228_0239 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9228_1040 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9228_1331 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF9228_1933 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_0376 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_1333 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_0795 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_1611 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_1826 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_0659 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_0667 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_1323 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_0977 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_0240 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_1041 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF9228_0953 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D HMPREF9228_1028 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF9228_1252 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF9228_0259 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF9228_0547 lacY; galactoside permease K02532 lacY; MFS transporter, OHS family, lactose permease
D HMPREF9228_1821 transporter, major facilitator family protein K02429 fucP; MFS transporter, FHS family, L-fucose permease
D HMPREF9228_1628 transporter, major facilitator family protein K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D HMPREF9228_1462 transporter, major facilitator family protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D HMPREF9228_1255 transporter, major facilitator family protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D HMPREF9228_1008 transporter, major facilitator family protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D HMPREF9228_1778 transporter, major facilitator family protein K06902 UMF1; MFS transporter, UMF1 family
D HMPREF9228_0553 transporter, major facilitator family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D HMPREF9228_0196 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HMPREF9228_0194 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D HMPREF9228_1647 phosphotransferase system, EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D HMPREF9228_0486 phosphotransferase system, EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF9228_0485 PTS system, Fru family, IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D HMPREF9228_1989 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HMPREF9228_1988 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HMPREF9228_1987 putative sugar-specific permease, SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF9228_0836 transporter, major intrinsic protein (MIP) family protein K06188 aqpZ; aquaporin Z
D HMPREF9228_0285 MIP family channel protein K02440 glpF; glycerol uptake facilitator
D HMPREF9228_2001 Ion channel K10716 kch; voltage-gated potassium channel
D HMPREF9228_0256 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D HMPREF9228_0498 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D HMPREF9228_1497 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D HMPREF9228_0742 CorA-like protein K03284 corA; magnesium transporter
D HMPREF9228_1275 CrcB-like protein K06199 crcB; fluoride exporter
D HMPREF9228_1276 putative protein CrcB K06199 crcB; fluoride exporter
D HMPREF9228_0099 putative protein CrcB K06199 crcB; fluoride exporter
D HMPREF9228_0020 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF9228_0942 era; ribosome biogenesis GTPase Era K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF9228_0369 von Willebrand factor type A domain protein K21449 ata; trimeric autotransporter adhesin
D HMPREF9228_1600 gph; glycoside/pentoside/hexuronide transporter K16209 lacS; lactose/raffinose/galactose permease
D HMPREF9228_0789 Tat pathway signal sequence domain protein K16235 mmuP; S-methylmethionine transporter
D HMPREF9228_0809 amino acid permease K16235 mmuP; S-methylmethionine transporter
D HMPREF9228_0597 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D HMPREF9228_0646 citrate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D HMPREF9228_0047 putative sodium/proline symporter K11928 putP; sodium/proline symporter
D HMPREF9228_1052 putative Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D HMPREF9228_1961 putative Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D HMPREF9228_1155 Trk-type K+ transport system, NAD-binding component family protein K03499 trkA; trk/ktr system potassium uptake protein
D HMPREF9228_1745 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D HMPREF9228_0097 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D HMPREF9228_1060 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D HMPREF9228_0443 metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family K03322 mntH; manganese transport protein
D HMPREF9228_2013 putative integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D HMPREF9228_1818 transporter, auxin efflux carrier (AEC) family protein K13936 mdcF; malonate transporter and related proteins
D HMPREF9228_1247 transporter, auxin efflux carrier (AEC) family protein K24180 mleP; malate permease and related proteins
D HMPREF9228_0417 transporter, auxin efflux carrier (AEC) family protein K24180 mleP; malate permease and related proteins
D HMPREF9228_1864 transporter, auxin efflux carrier (AEC) family protein K24180 mleP; malate permease and related proteins
D HMPREF9228_1897 potassium transporter K03549 kup; KUP system potassium uptake protein
D HMPREF9228_0528 translocator protein, LysE family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D HMPREF9228_0541 hypothetical protein K23675 fmnP; riboflavin transporter
D HMPREF9228_1765 membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D HMPREF9228_0611 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HMPREF9228_0316 hypothetical protein K23242 mntP; manganese efflux pump family protein
D HMPREF9228_0235 iron permease FTR1 family K07243 FTR; high-affinity iron transporter
D HMPREF9228_0236 hypothetical protein K07230 p19; periplasmic iron binding protein
D HMPREF9228_1423 chain length determinant protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D HMPREF9228_1935 hypothetical protein K25089 musI; membrane protein
C 02044 Secretion system [BR:bbv02044]
D HMPREF9228_0961 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HMPREF9228_0136 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HMPREF9228_0137 hypothetical protein K12510 tadB; tight adherence protein B
D HMPREF9228_0564 hypothetical protein K02221 yggT; YggT family protein
D HMPREF9228_0745 comEA protein K02237 comEA; competence protein ComEA
D HMPREF9228_0697 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF9228_1808 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF9228_0866 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF9228_1675 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF9228_0396 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF9228_0255 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF9228_0842 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF9228_2019 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:bbv02042]
D HMPREF9228_0020 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF9228_0942 era; ribosome biogenesis GTPase Era K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF9228_1126 hypothetical protein K11068 hlyIII; hemolysin III
D HMPREF9228_0086 hypothetical protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:bbv02022]
D HMPREF9228_1751 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF9228_1622 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D HMPREF9228_1750 response regulator receiver domain protein K07776 regX3; two-component system, OmpR family, response regulator RegX3
D HMPREF9228_0510 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D HMPREF9228_0509 response regulator receiver domain protein K02483 K02483; two-component system, OmpR family, response regulator
D HMPREF9228_0277 response regulator receiver domain protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D HMPREF9228_1125 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D HMPREF9228_1098 response regulator receiver domain protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:bbv02035]
D HMPREF9228_0961 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HMPREF9228_0136 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bbv04812]
D HMPREF9228_0562 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF9228_2016 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF9228_0649 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D HMPREF9228_1566 hypothetical protein K03496 parA; chromosome partitioning protein
D HMPREF9228_1595 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF9228_2015 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bbv04147]
D HMPREF9228_1135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF9228_0638 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF9228_0868 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF9228_1101 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF9228_0719 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF9228_0506 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF9228_0125 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF9228_0420 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF9228_0072 peptidase, S9A/B/C family, catalytic domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D HMPREF9228_1519 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF9228_0769 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF9228_1281 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF9228_0945 histidine triad domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF9228_0865 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9228_0596 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF9228_1496 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0429 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0941 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_0771 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HMPREF9228_1674 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF9228_0841 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF9228_1170 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HMPREF9228_1177 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HMPREF9228_1405 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF9228_1112 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF9228_0590 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_1196 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF9228_0601 putative phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HMPREF9228_0837 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF9228_1194 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF9228_0249 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF9228_0867 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF9228_0741 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF9228_1624 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bbv02048]
D HMPREF9228_1445 cas1; CRISPR-associated endonuclease Cas1, DVULG subtype K15342 cas1; CRISP-associated protein Cas1
D HMPREF9228_1444 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D HMPREF9228_1451 CRISPR-associated endonuclease Cas3-HD K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D HMPREF9228_1446 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D HMPREF9228_1448 csd1; CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D HMPREF9228_1447 hypothetical protein K19118 csd2; CRISPR-associated protein Csd2
D HMPREF9228_0227 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF9228_1022 toxin-antitoxin system, toxin component, MazF family K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D HMPREF9228_0791 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D HMPREF9228_1171 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF9228_0792 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF9228_0969 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF9228_1781 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF9228_1172 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D HMPREF9228_0391 HipA-like C-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HMPREF9228_0401 PIN domain protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D HMPREF9228_0402 toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein K21495 fitA; antitoxin FitA
D HMPREF9228_0562 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF9228_0208 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HMPREF9228_0656 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:bbv04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:bbv04090]
D HMPREF9228_0072 peptidase, S9A/B/C family, catalytic domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:bbv01504]
D HMPREF9228_1462 transporter, major facilitator family protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D HMPREF9228_1232 putative translation elongation factor G K18220 tetM; ribosomal protection tetracycline resistance protein
D HMPREF9228_1008 transporter, major facilitator family protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D HMPREF9228_0250 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bbv03100]
D HMPREF9228_0015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9228_1925 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9228_1073 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9228_1074 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF9228_1342 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9228_0336 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9228_1054 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9228_1055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9228_1499 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF9228_0752 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF9228_0765 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF9228_1539 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF9228_1559 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF9228_0852 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF9228_0210 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF9228_1082 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF9228_1561 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF9228_0209 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF9228_0367 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9228_0093 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9228_0849 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9228_0853 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9228_1789 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF9228_1286 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF9228_0016 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF9228_0087 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9228_0418 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9228_0947 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9228_1099 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9228_1131 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF9228_0251 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF9228_0272 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF9228_0320 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9228_1530 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9228_1730 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF9228_1558 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF9228_1627 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF9228_1088 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF9228_0833 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF9228_0233 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9228_1643 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9228_1664 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9228_1721 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF9228_1731 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9228_0419 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9228_2005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF9228_1809 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF9228_1732 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF9228_1212 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9228_0850 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9228_1787 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9228_0851 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9228_1788 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF9228_0573 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9228_1948 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9228_1951 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF9228_1947 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9228_1950 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9228_0574 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF9228_0575 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9228_1946 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9228_1949 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF9228_0188 srpB; Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF9228_0695 rnpB; Bacterial RNase P class A K01978 rnpB; M1 RNA
D HMPREF9228_0615 HMPREF9228_0615 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HMPREF9228_0441 oxidoreductase, aldo/keto reductase family protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D HMPREF9228_0571 oxidoreductase, aldo/keto reductase family protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D HMPREF9228_0411 oxidoreductase, aldo/keto reductase family protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D HMPREF9228_1464 alcohol dehydrogenase, iron-dependent K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D HMPREF9228_0352 anaerobic sulfatase maturase K24118 atsB; serine-type anaerobic sulfatase-maturating enzyme [EC:1.1.98.7]
D HMPREF9228_0079 msrB; methionine-R-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D HMPREF9228_0023 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D HMPREF9228_0091 pyridine nucleotide-disulfide oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HMPREF9228_1229 glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D HMPREF9228_1491 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HMPREF9228_1064 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HMPREF9228_1557 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D HMPREF9228_1638 gnpA; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D HMPREF9228_1760 kojP; kojibiose phosphorylase K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D HMPREF9228_0814 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HMPREF9228_1637 phosphotransferase enzyme family K13059 nahK; N-acetylhexosamine 1-kinase [EC:2.7.1.162]
D HMPREF9228_1927 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HMPREF9228_1467 kinase, PfkB family K23147 E2.7.1.223; aminoimidazole riboside kinase [EC:2.7.1.223]
D HMPREF9228_0894 glnE; [glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D HMPREF9228_1268 hypothetical protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D HMPREF9228_0905 macro domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D HMPREF9228_1075 phosphoglycerate mutase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D HMPREF9228_1219 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D HMPREF9228_0899 phosphoglycerate mutase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D HMPREF9228_0354 arylsulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D HMPREF9228_1898 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HMPREF9228_0330 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D HMPREF9228_0440 ganB; arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D HMPREF9228_1384 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF9228_0772 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF9228_1533 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF9228_0502 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D HMPREF9228_0572 hypothetical protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D HMPREF9228_0882 putative YjeF domain protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D HMPREF9228_1128 peptidyl-prolyl cis-trans isomerase, FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D HMPREF9228_0733 N-acylglucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D HMPREF9228_1257 N-acylglucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D HMPREF9228_1967 putative potassium/sodium efflux P-type ATPase, fungal-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D HMPREF9228_0678 E1-E2 ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D HMPREF9228_0951 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D HMPREF9228_1651 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D HMPREF9228_1995 nrdI; nrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D HMPREF9228_0266 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D HMPREF9228_0493 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D HMPREF9228_0264 ABC1 family protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
D HMPREF9228_1791 flavin reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D HMPREF9228_0901 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D HMPREF9228_1963 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D HMPREF9228_1231 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HMPREF9228_0505 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D HMPREF9228_0511 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D HMPREF9228_1061 tig; trigger factor K03545 tig; trigger factor
D HMPREF9228_1377 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D HMPREF9228_1996 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D HMPREF9228_1046 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D HMPREF9228_0288 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
D HMPREF9228_1251 base excision DNA repair protein, HhH-GPD family K07457 K07457; endonuclease III related protein
D HMPREF9228_1045 TIGR00252 family protein K07460 yraN; putative endonuclease
D HMPREF9228_1047 putative DNA protecting protein DprA K04096 smf; DNA processing protein
D HMPREF9228_0532 recombination factor protein RarA K07478 ycaJ; putative ATPase
D HMPREF9228_0450 integrase core domain protein K07482 K07482; transposase, IS30 family
D HMPREF9228_1337 hypothetical protein K07483 K07483; transposase
D HMPREF9228_0273 hypothetical protein K07493 K07493; putative transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HMPREF9228_1931 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D HMPREF9228_1934 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D HMPREF9228_1727 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HMPREF9228_1353 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HMPREF9228_1002 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D HMPREF9228_0861 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D HMPREF9228_1285 bile acid transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D HMPREF9228_0982 pbuX; xanthine permease K03458 TC.NCS2; nucleobase:cation symporter-2, NCS2 family
C 99978 Cell growth
D HMPREF9228_0030 CotH protein K06330 cotH; spore coat protein H
D HMPREF9228_2018 R3H domain protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D HMPREF9228_0661 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D HMPREF9228_1403 ACT domain protein K07166 K07166; ACT domain-containing protein
D HMPREF9228_0944 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D HMPREF9228_1890 glycosyl hydrolase family 25 K07273 acm; lysozyme
C 99994 Others
D HMPREF9228_1623 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HMPREF9228_0476 HAD hydrolase, family IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily
D HMPREF9228_0955 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D HMPREF9228_0954 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D HMPREF9228_0378 LemA family protein K03744 lemA; LemA protein
D HMPREF9228_0134 SNARE-like domain protein K03975 dedA; membrane-associated protein
D HMPREF9228_1943 YhgE/Pip domain protein K01421 yhgE; putative membrane protein
D HMPREF9228_1944 YhgE/Pip domain protein K01421 yhgE; putative membrane protein
D HMPREF9228_0243 YhgE/Pip domain protein K01421 yhgE; putative membrane protein
D HMPREF9228_0244 YhgE/Pip domain protein K01421 yhgE; putative membrane protein
D HMPREF9228_0538 hypothetical protein K08972 K08972; putative membrane protein
D HMPREF9228_1319 TIGR03943 family protein K08986 ycgQ; putative membrane protein
C 99997 Function unknown
D HMPREF9228_0682 hypothetical protein K06890 K06890; uncharacterized protein
D HMPREF9228_1895 hypothetical protein K06950 K06950; uncharacterized protein
D HMPREF9228_1164 HD domain protein K06950 K06950; uncharacterized protein
D HMPREF9228_0393 hypothetical protein K06960 K06960; uncharacterized protein
D HMPREF9228_1480 hydrolase CocE/NonD family protein K06978 K06978; uncharacterized protein
D HMPREF9228_0080 hypothetical protein K07005 K07005; uncharacterized protein
D HMPREF9228_0739 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D HMPREF9228_1486 nucleotidyltransferase domain protein K07075 K07075; uncharacterized protein
D HMPREF9228_1318 putative permease K07089 K07089; uncharacterized protein
D HMPREF9228_0351 hypothetical protein K07090 K07090; uncharacterized protein
D HMPREF9228_1962 hypothetical protein K07090 K07090; uncharacterized protein
D HMPREF9228_0215 hypothetical protein K07118 K07118; uncharacterized protein
D HMPREF9228_1902 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9228_1910 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9228_0358 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9228_1228 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9228_0183 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9228_1271 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9228_0018 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9228_0034 hypothetical protein K07133 K07133; uncharacterized protein
D HMPREF9228_1133 hypothetical protein K09009 K09009; uncharacterized protein
D HMPREF9228_1140 hypothetical protein K09118 K09118; uncharacterized protein
D HMPREF9228_1402 hypothetical protein K09157 K09157; uncharacterized protein
D HMPREF9228_0912 YfbU domain protein K09161 K09161; uncharacterized protein
D HMPREF9228_0734 hypothetical protein K09704 K09704; uncharacterized protein
D HMPREF9228_0784 hypothetical protein K09974 K09974; uncharacterized protein
D HMPREF9228_1001 conserved hypothetical protein TIGR00153 K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024