+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Bacteroides caecimuris

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D A4V03_05100 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A4V03_17130 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A4V03_04650 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E A4V03_19175 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins D A4V03_02630 flotillin K07192 FLOT; flotillin C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) C HU (heat unstable protein) D A4V03_16960 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D A4V03_11490 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta D A4V03_08080 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta D A4V03_08315 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) C Other nucleoid associated proteins D A4V03_12715 molecular chaperone DnaJ K05516 cbpA; curved DNA-binding protein D A4V03_13820 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D A4V03_10785 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D A4V03_14560 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex C Divisome proteins D A4V03_19580 cell division protein FtsA K03590 ftsA; cell division protein FtsA D A4V03_11085 phosphonate ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D A4V03_19620 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A4V03_02980 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D A4V03_19585 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D A4V03_19600 rod shape-determining protein RodA K03588 ftsW; cell division protein FtsW D A4V03_18415 ABC transporter permease K09811 ftsX; cell division transport system permease protein D A4V03_19575 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A4V03_16995 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A4V03_12985 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A4V03_13810 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A4V03_06390 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4V03_15095 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4V03_14245 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly C Other chromosome partitioning proteins D A4V03_01065 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D A4V03_01070 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D A4V03_01085 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D A4V03_01915 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D A4V03_07850 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D A4V03_15250 conjugal transfer protein TraA K03496 parA; chromosome partitioning protein D A4V03_04955 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4V03_01910 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4V03_17250 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4V03_07840 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4V03_07620 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4V03_20130 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A4V03_17760 DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A4V03_18675 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D A4V03_07300 16S rRNA methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A4V03_16445 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D A4V03_12330 hypothetical protein K03733 xerC; integrase/recombinase XerC D A4V03_05295 hypothetical protein K03733 xerC; integrase/recombinase XerC D A4V03_07470 hypothetical protein K03733 xerC; integrase/recombinase XerC D A4V03_02455 recombinase K04763 xerD; integrase/recombinase XerD D A4V03_10615 recombinase K04763 xerD; integrase/recombinase XerD D A4V03_17405 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D A4V03_03840 recombinase K04763 xerD; integrase/recombinase XerD D A4V03_12325 integrase K04763 xerD; integrase/recombinase XerD D A4V03_05270 recombinase K04763 xerD; integrase/recombinase XerD D A4V03_05300 integrase K04763 xerD; integrase/recombinase XerD D A4V03_11945 recombinase K04763 xerD; integrase/recombinase XerD D A4V03_10990 integrase K04763 xerD; integrase/recombinase XerD D A4V03_07475 integrase K04763 xerD; integrase/recombinase XerD D A4V03_16580 integrase K04763 xerD; integrase/recombinase XerD D A4V03_01465 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning D A4V03_11875 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D A4V03_11880 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D A4V03_07365 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024