+D GENES KO #

  KEGG Orthology (KO) - Burkholderia cepacia DDS 7H-2

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:bced00010] D DM42_877 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D DM42_3183 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DM42_4847 putative phosphofructokinase pfkB K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D DM42_815 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DM42_2443 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DM42_2810 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DM42_1204 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DM42_2441 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DM42_2212 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DM42_1157 histidine phosphatase super family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DM42_2981 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DM42_2442 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DM42_4917 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DM42_3096 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DM42_6058 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_6436 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_2951 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_3263 acoC; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DM42_2952 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2465 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_664 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_6548 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_4877 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_3516 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_1907 zinc-binding dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D DM42_5620 PQQ-dependent dehydrogenase, methanol/ethanol family protein K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D DM42_3547 cytochrome c family protein K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D DM42_7055 cytochrome c family protein K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D DM42_3729 gluconate 2-dehydrogenase cytochrome c subunit K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_1643 acoD; acetaldehyde dehydrogenase 2 K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D DM42_404 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5799 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7365 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5616 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_2875 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7191 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_6848 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D DM42_7224 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D DM42_1217 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D DM42_4322 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D DM42_935 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DM42_4652 aldehyde dehydrogenase family protein K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D DM42_6379 phosphoenolpyruvate carboxykinase family protein K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:bced00020] D DM42_4114 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D DM42_2533 citrate synthase family protein K01647 CS; citrate synthase [EC:2.3.3.1] D DM42_4125 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DM42_6116 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D DM42_2543 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DM42_2544 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DM42_189 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D DM42_188 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2424 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DM42_2423 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DM42_3841 succinate CoA transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D DM42_4117 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DM42_7075 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DM42_4116 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DM42_4119 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DM42_4118 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D DM42_2872 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D DM42_737 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DM42_4121 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DM42_4980 mqo; malate dehydrogenase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D DM42_6379 phosphoenolpyruvate carboxykinase family protein K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D DM42_6058 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_6436 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_2951 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_3263 acoC; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DM42_2952 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:bced00030] D DM42_3183 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DM42_5372 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DM42_874 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DM42_876 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D DM42_2897 lactonase, 7-bladed beta-propeller family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D DM42_2736 lactonase, 7-bladed beta-propeller family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D DM42_4145 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D DM42_1307 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DM42_1205 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DM42_2723 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D DM42_144 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D DM42_7287 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D DM42_6573 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D DM42_87 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D DM42_7283 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D DM42_935 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DM42_4900 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D DM42_2267 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D DM42_1182 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D DM42_1181 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D DM42_4652 aldehyde dehydrogenase family protein K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D DM42_6214 FAD dependent oxidoreductase family protein K19813 gdh; glucose dehydrogenase [EC:1.1.5.9] D DM42_6159 FAD dependent oxidoreductase family protein K19813 gdh; glucose dehydrogenase [EC:1.1.5.9] D DM42_5386 strictosidine synthase family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D DM42_3730 gluconate 2-dehydrogenase flavoprotein K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D DM42_3731 gluconate 2-dehydrogenase subunit 3 family protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D DM42_3459 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D DM42_722 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D DM42_1179 carbohydrate kinase, thermoresistant glucokinase family protein K00851 idnK; gluconokinase [EC:2.7.1.12] D DM42_3406 pfkB carbohydrate kinase family protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D DM42_3457 pfkB carbohydrate kinase family protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D DM42_2443 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DM42_815 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DM42_4847 putative phosphofructokinase pfkB K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:bced00040] D DM42_5025 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D DM42_5024 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D DM42_6687 pglA; polygalacturonase K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15] D DM42_6284 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D DM42_5966 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_4230 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_776 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_260 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DM42_4077 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DM42_4539 hypothetical protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D DM42_1307 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DM42_5987 hypothetical protein K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16] D DM42_2464 hypothetical protein K00854 xylB; xylulokinase [EC:2.7.1.17] D DM42_2483 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D DM42_5059 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D DM42_6850 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D DM42_2484 mannitol dehydrogenase Rossmann domain protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11] D DM42_5056 D-xylulose reductase K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9] D DM42_1218 short chain dehydrogenase family protein K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175] D DM42_6867 dehydratase family protein K22186 xylD; xylonate dehydratase [EC:4.2.1.82] D DM42_6642 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D DM42_3829 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D DM42_5460 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D DM42_5218 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D DM42_6440 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D DM42_6447 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:bced00051] D DM42_156 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D DM42_2472 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D DM42_2035 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D DM42_1070 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_4232 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_3747 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_945 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_935 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DM42_4084 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D DM42_5218 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D DM42_6440 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D DM42_6447 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D DM42_6644 aldo/keto reductase family protein K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D DM42_6637 aldo/keto reductase family protein K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D DM42_5708 short chain dehydrogenase family protein K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435] D DM42_5712 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120] D DM42_5707 hypothetical protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68] D DM42_5705 short chain dehydrogenase family protein K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D DM42_5706 fumarylacetoacetate (FAA) hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D DM42_5075 fumarylacetoacetate (FAA) hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D DM42_4847 putative phosphofructokinase pfkB K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D DM42_815 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DM42_6850 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D DM42_2471 polS; sorbitol dehydrogenase K08261 E1.1.99.21; D-sorbitol dehydrogenase (acceptor) [EC:1.1.99.21] D DM42_2484 mannitol dehydrogenase Rossmann domain protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11] D DM42_2443 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DM42_2810 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DM42_6421 dhaL; dihydroxyacetone kinase, L subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15] D DM42_3683 hypothetical protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] D DM42_4085 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] D DM42_2207 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:bced00052] D DM42_6848 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D DM42_7224 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D DM42_1217 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D DM42_4322 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D DM42_939 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DM42_260 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DM42_4077 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DM42_935 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DM42_877 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D DM42_5181 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D DM42_6823 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D DM42_7025 glycosyl hydrolases 31 family protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D DM42_4847 putative phosphofructokinase pfkB K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D DM42_7027 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D DM42_2473 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D DM42_2405 hypothetical protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D DM42_1224 2-keto-3-deoxy-galactonokinase family protein K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D DM42_1223 thiamine monophosphate synthase/TENI family protein K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D DM42_3804 glycosyl hydrolases 31 family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D DM42_7028 putative tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism [PATH:bced00053] D DM42_5966 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_4230 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_776 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_5386 strictosidine synthase family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D DM42_6644 aldo/keto reductase family protein K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D DM42_6637 aldo/keto reductase family protein K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D DM42_4539 hypothetical protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_559 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D DM42_1534 D-glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D DM42_1895 hpcH/HpaI aldolase/citrate lyase family protein K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20] D DM42_5189 oxidoreductase , NAD-binding Rossmann fold family protein K13873 araA; L-arabinose 1-dehydrogenase [EC:1.1.1.376] D DM42_5193 SMP-30/Gluconolaconase/LRE-like region family protein K13874 araB; L-arabinonolactonase [EC:3.1.1.15] D DM42_5187 dehydratase family protein K13875 araC; L-arabonate dehydrase [EC:4.2.1.25] D DM42_5188 araD; L-2-keto-3-deoxyarabonate dehydratase K13876 araD; 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43] D DM42_6642 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D DM42_3829 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D DM42_5460 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D DM42_5462 kdgD; 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] D DM42_5463 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42] D DM42_4664 3-beta hydroxysteroid dehydrogenase/isomerase family protein K18981 udh; uronate dehydrogenase [EC:1.1.1.203] D DM42_6235 amidohydrolase family protein K18982 gli; D-galactarolactone isomerase [EC:5.4.1.4] D DM42_5393 amidohydrolase family protein K18982 gli; D-galactarolactone isomerase [EC:5.4.1.4] C 00500 Starch and sucrose metabolism [PATH:bced00500] D DM42_3804 glycosyl hydrolases 31 family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D DM42_3682 lsdA; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10] D DM42_260 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DM42_4077 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DM42_2661 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D DM42_3760 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D DM42_314 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D DM42_7084 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D DM42_7083 treS; trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D DM42_7087 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D DM42_7082 alpha amylase, catalytic domain protein K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D DM42_7085 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D DM42_7088 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D DM42_7086 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D DM42_2682 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D DM42_564 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D DM42_6388 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D DM42_565 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D DM42_5936 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D DM42_935 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DM42_877 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D DM42_3183 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DM42_156 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D DM42_2472 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D DM42_2035 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bced00520] D DM42_27 carbohydrate binding domain protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D DM42_687 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D DM42_2249 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D DM42_2248 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D DM42_2245 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D DM42_1582 putative N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8] D DM42_156 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D DM42_2472 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D DM42_2035 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D DM42_388 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_2246 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_2027 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_3866 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_4672 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_422 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D DM42_2028 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D DM42_1160 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D DM42_790 gph; phosphoglycolate phosphatase, bacterial K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D DM42_2360 phosphotransferase enzyme family protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D DM42_2359 nucleotidyl transferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D DM42_1398 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DM42_3569 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DM42_2514 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DM42_381 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D DM42_3240 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D DM42_3237 polysaccharide deacetylase family protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D DM42_5968 3-beta hydroxysteroid dehydrogenase/isomerase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D DM42_7127 3-beta hydroxysteroid dehydrogenase/isomerase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D DM42_5967 galE; UDP-glucose 4-epimerase GalE K12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5] D DM42_877 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D DM42_935 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DM42_260 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DM42_4077 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DM42_5966 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_4230 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_776 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_939 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DM42_2207 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DM42_3183 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DM42_1070 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_4232 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_3747 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_945 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_4084 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D DM42_4085 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] D DM42_2577 2Fe-2S iron-sulfur cluster binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:bced00620] D DM42_404 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5799 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7365 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5616 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_2875 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7191 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_6058 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_6436 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_2951 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_3263 acoC; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DM42_2952 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_4992 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D DM42_6344 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D DM42_6548 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_4877 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_3516 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_2465 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_664 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_1907 zinc-binding dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D DM42_5620 PQQ-dependent dehydrogenase, methanol/ethanol family protein K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D DM42_3547 cytochrome c family protein K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D DM42_7055 cytochrome c family protein K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D DM42_3729 gluconate 2-dehydrogenase cytochrome c subunit K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D DM42_4870 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DM42_4865 phosphate acetyl/butaryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DM42_3910 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DM42_2442 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DM42_3011 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DM42_1236 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DM42_2134 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DM42_1237 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DM42_2133 D-ala D-ala ligase family protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DM42_4092 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DM42_5250 acylphosphatase family protein K01512 acyP; acylphosphatase [EC:3.6.1.7] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_1643 acoD; acetaldehyde dehydrogenase 2 K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D DM42_3841 succinate CoA transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D DM42_3492 FMN-dependent dehydrogenase family protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D DM42_5714 FMN-dependent dehydrogenase family protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D DM42_7049 thiamine pyrophosphate enzyme, central domain protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D DM42_4765 thiamine pyrophosphate enzyme, central domain protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D DM42_1004 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D DM42_1104 FAD binding domain protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D DM42_2366 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D DM42_434 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D DM42_1543 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D DM42_5050 hchA; chaperone protein hchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D DM42_6879 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D DM42_2104 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D DM42_3459 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D DM42_722 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D DM42_1211 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D DM42_1511 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D DM42_4569 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D DM42_4121 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DM42_4980 mqo; malate dehydrogenase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D DM42_2872 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D DM42_737 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DM42_2647 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D DM42_6379 phosphoenolpyruvate carboxykinase family protein K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D DM42_4917 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DM42_3096 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DM42_5167 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D DM42_3047 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2802 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D DM42_4969 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D DM42_2257 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bced00630] D DM42_3051 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D DM42_6372 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D DM42_404 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5799 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7365 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5616 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_2875 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7191 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5167 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D DM42_3047 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D DM42_4121 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DM42_4114 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D DM42_2533 citrate synthase family protein K01647 CS; citrate synthase [EC:2.3.3.1] D DM42_4125 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DM42_6116 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_4867 phbB; acetoacetyl-CoA reductase family protein K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D DM42_3313 phbB-1; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D DM42_2299 phbB-1; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D DM42_2061 maoC like domain protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D DM42_1105 FAD binding domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D DM42_5171 FAD binding domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D DM42_1106 FAD binding domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D DM42_5170 FAD binding domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D DM42_1107 4Fe-4S binding domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D DM42_5169 4Fe-4S dicluster domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D DM42_7100 catalase family protein K03781 katE; catalase [EC:1.11.1.6] D DM42_4155 catalase family protein K03781 katE; catalase [EC:1.11.1.6] D DM42_1766 catalase family protein K03781 katE; catalase [EC:1.11.1.6] D DM42_6472 catalase family protein K03781 katE; catalase [EC:1.11.1.6] D DM42_6879 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D DM42_2104 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D DM42_3459 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D DM42_722 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D DM42_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D DM42_1308 gph; phosphoglycolate phosphatase, bacterial K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D DM42_6037 HAD hydrolase, IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D DM42_5928 haloacid dehalogenase-like hydrolase family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D DM42_713 HAD hydrolase, IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D DM42_5906 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2016 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2923 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2938 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_5664 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DM42_1023 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DM42_1634 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D DM42_1632 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_1633 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D DM42_3223 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D DM42_3222 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D DM42_3221 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D DM42_3173 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D DM42_4344 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D DM42_5131 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D DM42_6773 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D DM42_1181 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D DM42_6184 oxdD; oxalate decarboxylase oxdD K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2] D DM42_7154 fdh; NAD-dependent formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9] D DM42_799 NADH-dependent formate dehydrogenase delta subunit FdsD family protein K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D DM42_4069 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DM42_4070 molybdopterin oxidoreductase Fe4S4 domain protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DM42_798 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DM42_4068 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DM42_797 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region family protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DM42_4067 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D DM42_796 thioredoxin-like [2Fe-2S] ferredoxin family protein K00127 fdoI; formate dehydrogenase subunit gamma D DM42_3510 alpha/beta hydrolase fold family protein K01432 AFMID; arylformamidase [EC:3.5.1.9] D DM42_2492 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D DM42_2289 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D DM42_5675 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D DM42_2921 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:bced00640] D DM42_404 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5799 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7365 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5616 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_2875 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7191 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_4870 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DM42_4865 phosphate acetyl/butaryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DM42_3910 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DM42_479 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D DM42_478 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D DM42_477 bkdB; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_5378 quinone oxidoreductase, YhdH/YhfP family protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_3011 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DM42_1236 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DM42_2134 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DM42_1237 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DM42_2133 D-ala D-ala ligase family protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DM42_4092 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DM42_5413 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D DM42_3646 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D DM42_900 enoyl-CoA hydratase/isomerase family protein K11264 scpB; methylmalonyl-CoA decarboxylase [EC:4.1.1.-] D DM42_2423 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DM42_2424 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DM42_3645 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_5800 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_6497 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_268 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_3940 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_5283 2-methylcitrate synthase/citrate synthase II family protein K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D DM42_4124 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D DM42_5284 acnD; 2-methylisocitrate dehydratase, Fe/S-dependent K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D DM42_5285 prpF; putative AcnD-accessory protein PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D DM42_6116 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D DM42_5282 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D DM42_2770 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:bced00650] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7296 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DM42_4434 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DM42_6237 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DM42_2352 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DM42_3194 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DM42_2190 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_5327 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D DM42_4992 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D DM42_6344 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D DM42_2061 maoC like domain protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D DM42_4866 poly-beta-hydroxybutyrate polymerase family protein K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D DM42_3311 phbC; poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D DM42_2734 phaZ; polyhydroxyalkanoate depolymerase, intracellular family protein K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D DM42_4913 phaZ; polyhydroxyalkanoate depolymerase, intracellular family protein K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D DM42_4314 phaZ; polyhydroxyalkanoate depolymerase, intracellular family protein K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D DM42_4867 phbB; acetoacetyl-CoA reductase family protein K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D DM42_3313 phbB-1; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D DM42_2299 phbB-1; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D DM42_6323 putative glutaconate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D DM42_4344 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D DM42_5131 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D DM42_6773 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D DM42_5718 asp/Glu/Hydantoin racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D DM42_3946 asp/Glu/Hydantoin racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D DM42_4117 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DM42_7075 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DM42_4116 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DM42_4119 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DM42_4118 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D DM42_5413 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D DM42_6876 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_5876 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_3546 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_5412 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_3841 succinate CoA transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D DM42_3512 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DM42_5316 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DM42_2103 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DM42_235 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D DM42_234 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D DM42_5125 3-hydroxybutyrate dehydrogenase family protein K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D DM42_2855 short chain dehydrogenase family protein K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D DM42_990 phaZ2; D-(-)-3-hydroxybutyrate oligomer hydrolase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22] D DM42_5124 putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4] D DM42_4864 zinc-binding dehydrogenase family protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D DM42_2797 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_4269 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_6104 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_1639 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_2798 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DM42_5112 zinc-binding dehydrogenase family protein K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D DM42_6245 zinc-binding dehydrogenase family protein K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D DM42_3260 short chain dehydrogenase family protein K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D DM42_6019 short chain dehydrogenase family protein K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:bced00660] D DM42_2797 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_4269 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_6104 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_1639 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_2798 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DM42_6392 coA-transferase III family protein K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22] D DM42_2423 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DM42_2424 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DM42_7333 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D DM42_4103 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D DM42_4102 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D DM42_4101 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:bced00562] D DM42_1809 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_556 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_3615 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_4744 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_5264 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_5553 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_6033 phosphatidylinositol-specific phospholipase C, X domain protein K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13] D DM42_3002 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D DM42_2385 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D DM42_272 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D DM42_2386 xylose isomerase-like TIM barrel family protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11] D DM42_271 xylose isomerase-like TIM barrel family protein K03335 iolE; inosose dehydratase [EC:4.2.1.44] D DM42_279 xylose isomerase-like TIM barrel family protein K03335 iolE; inosose dehydratase [EC:4.2.1.44] D DM42_278 thiamine pyrophosphate enzyme, central domain protein K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D DM42_280 kduI/IolB family protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D DM42_277 pfkB carbohydrate kinase family protein K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D DM42_3645 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_5800 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_6497 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_268 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_3940 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_2810 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:bced00190] D DM42_2813 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D DM42_2814 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D DM42_2815 nuoC; dehydrogenase, subunit C family protein K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D DM42_2816 nuoD; NADH dehydrogenase (quinone), D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D DM42_2817 nuoE; NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D DM42_2818 nuoF; NADH oxidoreductase (quinone), F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D DM42_2819 nuoG; NADH dehydrogenase (quinone), G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D DM42_2820 NADH dehydrogenase family protein K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D DM42_2821 NADH-quinone oxidoreductase, chain I family protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D DM42_2822 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D DM42_2823 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D DM42_2824 proton-translocating NADH-quinone oxidoreductase, chain L family protein K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D DM42_2825 proton-translocating NADH-quinone oxidoreductase, chain M family protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D DM42_3016 proton-translocating NADH-quinone oxidoreductase, chain M family protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D DM42_2826 proton-translocating NADH-quinone oxidoreductase, chain N family protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D DM42_6050 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D DM42_4182 pyridine nucleotide-disulfide oxidoreductase family protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D DM42_5013 FAD dependent oxidoreductase family protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D DM42_660 pyridine nucleotide-disulfide oxidoreductase family protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D DM42_4117 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DM42_7075 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DM42_4116 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DM42_4119 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DM42_4118 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D DM42_1380 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D DM42_1379 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D DM42_1378 cytochrome C1 family protein K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D DM42_2232 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D DM42_3020 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D DM42_2227 cytochrome c oxidase subunit III family protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D DM42_2223 ctaD; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D DM42_7053 ctaD; cytochrome c oxidase, subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D DM42_7052 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D DM42_2222 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D DM42_2225 cytochrome c oxidase assembly CtaG/Cox11 family protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D DM42_2231 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D DM42_3019 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D DM42_3018 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D DM42_3017 cyoA; ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D DM42_5303 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DM42_2252 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DM42_7185 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DM42_5302 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DM42_2251 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DM42_7184 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DM42_3468 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D DM42_2250 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D DM42_2605 nirM; cytochrome c-551 K08738 CYC; cytochrome c D DM42_1536 ph_c-552; cytochrome c K08738 CYC; cytochrome c D DM42_4879 cytochrome c family protein K08738 CYC; cytochrome c D DM42_1677 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D DM42_1675 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D DM42_1676 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D DM42_1678 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D DM42_1674 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D DM42_1681 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DM42_1679 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DM42_1680 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D DM42_2658 inorganic pyrophosphatase family protein K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D DM42_414 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D DM42_3765 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:bced00710] D DM42_2441 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DM42_1204 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DM42_2443 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DM42_815 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DM42_1205 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DM42_144 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D DM42_2810 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DM42_1307 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DM42_2723 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D DM42_2647 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D DM42_1211 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D DM42_1511 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D DM42_4569 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D DM42_4121 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:bced00720] D DM42_4917 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DM42_3096 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DM42_2647 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D DM42_4121 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DM42_2872 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D DM42_737 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DM42_4117 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DM42_7075 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DM42_4116 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DM42_4119 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DM42_4118 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D DM42_2424 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DM42_2423 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2543 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DM42_2544 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DM42_4125 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DM42_6116 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D DM42_3011 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DM42_1236 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DM42_2134 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DM42_1237 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DM42_2133 D-ala D-ala ligase family protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DM42_4092 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DM42_6390 hypothetical protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153] D DM42_2948 tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D DM42_1554 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D DM42_4865 phosphate acetyl/butaryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DM42_3910 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DM42_4870 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DM42_404 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5799 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7365 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5616 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_2875 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7191 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:bced00680] D DM42_5657 fdhA; glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D DM42_674 fdhA; glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D DM42_2465 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_664 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_2466 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D DM42_661 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D DM42_7154 fdh; NAD-dependent formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9] D DM42_4069 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DM42_4070 molybdopterin oxidoreductase Fe4S4 domain protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DM42_798 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DM42_4068 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DM42_797 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region family protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DM42_4067 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D DM42_796 thioredoxin-like [2Fe-2S] ferredoxin family protein K00127 fdoI; formate dehydrogenase subunit gamma D DM42_799 NADH-dependent formate dehydrogenase delta subunit FdsD family protein K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D DM42_5664 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DM42_1023 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DM42_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D DM42_2981 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DM42_2647 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D DM42_4121 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DM42_6421 dhaL; dihydroxyacetone kinase, L subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15] D DM42_2443 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DM42_815 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DM42_4847 putative phosphofructokinase pfkB K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D DM42_5689 aauA; aralkylamine dehydrogenase light chain K15228 mauA; methylamine dehydrogenase light chain [EC:1.4.9.1] D DM42_5686 methylamine dehydrogenase heavy chain family protein K15229 mauB; methylamine dehydrogenase heavy chain [EC:1.4.9.1] D DM42_4870 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DM42_4865 phosphate acetyl/butaryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DM42_3910 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DM42_404 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5799 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7365 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5616 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_2875 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7191 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_4917 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DM42_3096 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DM42_2212 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DM42_1157 histidine phosphatase super family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DM42_1878 putative d-3-phosphoglycerate dehydrogenase oxidoreductase protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_5385 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_6234 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_785 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D DM42_3409 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:bced00910] D DM42_6269 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D DM42_7201 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D DM42_7206 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D DM42_7205 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D DM42_7203 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D DM42_6270 nirB; nitrite reductase [NAD(P)H], large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D DM42_6271 nirD; nitrite reductase [NAD(P)H], small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D DM42_3503 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D DM42_5173 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D DM42_6485 dihydroorotate dehydrogenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D DM42_3431 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D DM42_1551 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D DM42_2097 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D DM42_1138 nit2; nitrilase 2 K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D DM42_6468 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D DM42_6128 bacterial NAD-glutamate dehydrogenase family protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DM42_1174 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D DM42_5906 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2016 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2923 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2938 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_1419 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DM42_1418 gltD; glutamate synthase, NADH/NADPH, small subunit domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D DM42_4751 cynS; cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104] D DM42_2804 carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D DM42_4752 cynT; carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D DM42_6902 cynT; carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D DM42_2144 carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:bced00920] D DM42_2118 sbp; sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D DM42_96 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D DM42_95 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D DM42_94 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D DM42_93 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D DM42_2185 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein D DM42_2187 binding--dependent transport system inner membrane component family protein K15552 tauC; taurine transport system permease protein D DM42_2186 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D DM42_150 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_7400 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_6974 bacterial extracellular solute-binding s, 3 family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3965 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3973 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_6837 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_4535 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3702 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3961 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3520 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_1744 bacterial extracellular solute-binding s, 3 family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_4473 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3698 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_6983 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3119 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3699 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_129 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_3966 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_3967 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_6836 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_4536 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_4538 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_6981 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_1746 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_3118 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_128 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_3968 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_6835 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_6982 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_3700 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_1745 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_3117 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_130 ssuD; alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D DM42_3696 luciferase-like monooxygenase family protein K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D DM42_4533 luciferase-like monooxygenase family protein K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D DM42_3521 luciferase-like monooxygenase family protein K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D DM42_6527 msuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D DM42_5571 NADPH-dependent FMN reductase family protein K00299 ssuE; FMN reductase [EC:1.5.1.38] D DM42_2900 cysC; adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D DM42_2597 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D DM42_2596 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DM42_2901 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DM42_1043 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D DM42_2595 adenylylsulfate reductase, thioredoxin dependent family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D DM42_3917 molybdopterin oxidoreductase Fe4S4 domain protein K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6] D DM42_3916 4Fe-4S dicluster domain protein K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB D DM42_3915 DMSO reductase anchor subunit family protein K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC D DM42_6977 oxidoreductase molybdopterin binding domain protein K17225 soxC; sulfane dehydrogenase subunit SoxC D DM42_6978 cytochrome c family protein K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D DM42_6272 FAD binding domain protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D DM42_2593 nitrite and sulphite reductase 4Fe-4S domain protein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D DM42_6280 nitrite and sulphite reductase 4Fe-4S domain protein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D DM42_3442 FAD dependent oxidoreductase family protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D DM42_5309 ethe1; ETHE1, mitochondrial domain protein K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D DM42_4180 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D DM42_5094 bacterial transferase hexapeptide family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DM42_4551 bacterial transferase hexapeptide family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DM42_3004 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DM42_1913 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D DM42_4087 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D DM42_2496 56kDa selenium binding family protein K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4] D DM42_6528 sfnG; dimethyl sulfone monooxygenase SfnG K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35] D DM42_3193 AMP-binding enzyme family protein K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D DM42_3664 AMP-binding enzyme family protein K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D DM42_7299 hypothetical protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D DM42_2062 hypothetical protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D DM42_2351 hypothetical protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:bced00061] D DM42_3011 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DM42_1236 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DM42_2134 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DM42_1237 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DM42_2133 D-ala D-ala ligase family protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DM42_4092 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DM42_2312 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein D DM42_702 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D DM42_6950 hypothetical protein K02078 acpP; acyl carrier protein D DM42_445 acyl transferase domain protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DM42_704 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DM42_4936 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DM42_705 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DM42_4935 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DM42_2304 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D DM42_6948 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DM42_701 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DM42_2656 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6640 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2313 3-beta hydroxysteroid dehydrogenase/isomerase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2769 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_4450 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6002 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2588 rmlD substrate binding domain protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_282 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_703 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6333 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2691 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_4522 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_5394 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_3090 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DM42_6952 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DM42_5327 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D DM42_1292 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_162 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_5880 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_7303 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_2510 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:bced00071] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2353 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DM42_2072 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_2352 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DM42_3194 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DM42_2190 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DM42_3741 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_6699 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_2069 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_29 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_6391 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_4933 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_5037 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_1016 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D DM42_1292 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_162 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_5880 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_7303 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_2510 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_859 fatty acid desaturase family protein K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D DM42_6108 pyridine nucleotide-disulfide oxidoreductase family protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D DM42_2391 pyridine nucleotide-disulfide oxidoreductase family protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D DM42_2465 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_664 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_6548 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_4877 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_3516 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5902 FAD binding domain protein K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis [PATH:bced00100] D DM42_3690 squalene/phytoene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D DM42_5871 squalene/phytoene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:bced00561] D DM42_3173 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_1907 zinc-binding dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D DM42_6421 dhaL; dihydroxyacetone kinase, L subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15] D DM42_3988 hypothetical protein K00864 glpK; glycerol kinase [EC:2.7.1.30] D DM42_2393 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D DM42_706 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D DM42_2512 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DM42_2368 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DM42_961 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DM42_2790 prokaryotic diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DM42_4137 lipA; lipoyl synthase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D DM42_769 PGAP1-like family protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D DM42_2791 glycosyl transferases group 1 family protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D DM42_7025 glycosyl hydrolases 31 family protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:bced00564] D DM42_2216 NAD-dependent glycerol-3-phosphate dehydrogenase family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D DM42_3987 FAD binding domain protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D DM42_2394 FAD dependent oxidoreductase family protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D DM42_4235 cysteine-rich domain protein K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D DM42_2512 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DM42_2368 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DM42_961 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DM42_2790 prokaryotic diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DM42_1809 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_556 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_3615 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_4744 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_5264 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_5553 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_1422 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D DM42_3691 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D DM42_1648 ethanolamine ammonia lyase large subunit family protein K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D DM42_1646 ethanolamine ammonia-lyase light chain family protein K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D DM42_4764 methyltransferase domain protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D DM42_68 ribosomal RNA adenine dimethylase family protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D DM42_326 cytidylyltransferase family protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D DM42_3084 cytidylyltransferase family protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D DM42_2801 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DM42_7090 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D DM42_2800 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D DM42_682 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D DM42_1213 phosphatidylglycerophosphatase A family protein K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D DM42_2894 HAD phosphoserine phosphatase-like hydrolase, IB family protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D DM42_3065 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D DM42_2349 phospholipase D family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D DM42_4167 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] D DM42_2322 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:bced00565] D DM42_3986 FAD binding domain protein K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] D DM42_1809 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_556 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_3615 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_4744 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_5264 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_5553 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism [PATH:bced00600] D DM42_552 glycosyl transferase 2 family protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D DM42_7025 glycosyl hydrolases 31 family protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D DM42_2249 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:bced00592] D DM42_2353 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DM42_2072 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:bced01040] D DM42_2560 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D DM42_3181 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D DM42_2357 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:bced00230] D DM42_2828 NUDIX domain protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D DM42_935 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DM42_4900 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D DM42_2267 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D DM42_4088 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D DM42_2766 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D DM42_2557 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D DM42_2739 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D DM42_3186 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D DM42_1077 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D DM42_2446 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D DM42_2445 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D DM42_2444 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D DM42_1176 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D DM42_1151 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DM42_2286 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D DM42_4682 5'-nucleotidase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D DM42_3277 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DM42_4786 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DM42_6222 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D DM42_3310 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D DM42_1250 phosphoribosyl transferase domain protein K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D DM42_3107 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D DM42_3285 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DM42_840 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D DM42_998 xdhA; xanthine dehydrogenase, small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D DM42_997 xdhB; xanthine dehydrogenase, molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D DM42_2110 molybdopterin-binding domain of aldehyde dehydrogenase family protein K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D DM42_2109 FAD binding domain in molybdopterin dehydrogenase family protein K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D DM42_2108 [2Fe-2S] binding domain protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D DM42_3534 [2Fe-2S] binding domain protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D DM42_1709 peptidase C26 family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DM42_3109 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DM42_811 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D DM42_837 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D DM42_1245 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DM42_4848 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DM42_1244 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D DM42_1427 dgt; dGTPase family protein K01129 dgt; dGTPase [EC:3.1.5.1] D DM42_835 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DM42_7377 mesh1; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DM42_413 ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D DM42_227 RelA/SpoT family protein K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D DM42_7402 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D DM42_3299 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D DM42_1241 pfkB carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20] D DM42_4186 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D DM42_810 add; adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D DM42_2170 cpdB; 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D DM42_2520 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D DM42_491 calcineurin-like phosphoesterase family protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D DM42_6762 calcineurin-like phosphoesterase family protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D DM42_960 apaH; apaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D DM42_2900 cysC; adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D DM42_1043 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D DM42_2597 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D DM42_2596 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DM42_2901 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DM42_4482 FAD dependent oxidoreductase family protein K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D DM42_3140 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D DM42_3131 uraD; OHCU decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D DM42_3957 asp/Glu/Hydantoin racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3] D DM42_3129 asp/Glu/Hydantoin racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3] D DM42_3130 polysaccharide deacetylase family protein K16842 hpxB; allantoinase [EC:3.5.2.5] D DM42_3132 alc; allantoicase K01477 alc; allantoicase [EC:3.5.3.4] D DM42_1196 alc; allantoicase K01477 alc; allantoicase [EC:3.5.3.4] D DM42_5339 cupin domain protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D DM42_3133 ureidoglycolate hydrolase family protein K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D DM42_1195 ureidoglycolate hydrolase family protein K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D DM42_5277 ureidoglycolate lyase K16856 ugl; ureidoglycolate lyase [EC:4.3.2.3] D DM42_928 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D DM42_927 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D DM42_926 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:bced00240] D DM42_429 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DM42_431 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DM42_963 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D DM42_5996 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D DM42_962 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D DM42_1167 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D DM42_5454 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D DM42_139 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D DM42_1512 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D DM42_1216 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D DM42_3081 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D DM42_3285 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DM42_2761 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D DM42_2979 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D DM42_781 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D DM42_4682 5'-nucleotidase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D DM42_3277 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DM42_4786 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DM42_6222 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D DM42_2768 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D DM42_964 phosphoribosyl transferase domain protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DM42_2170 cpdB; 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D DM42_7354 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D DM42_3629 peptidase M20/M25/M40 family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D DM42_2636 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D DM42_1245 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DM42_4848 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DM42_1244 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D DM42_3208 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D DM42_2552 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D DM42_7355 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D DM42_742 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D DM42_7360 FAD dependent oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D DM42_7359 dihydroorotate dehydrogenase family domain protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D DM42_7357 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D DM42_4791 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_7361 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_6619 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_467 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_3869 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_1024 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:bced00250] D DM42_2563 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D DM42_3219 L-asparaginase, type II family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D DM42_3801 iaaA; isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D DM42_5956 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DM42_3422 asparagine synthase family protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DM42_3245 aminotransferase class-V family protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D DM42_3734 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D DM42_3901 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D DM42_4341 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DM42_2640 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DM42_7402 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D DM42_3299 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D DM42_1176 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D DM42_963 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D DM42_5996 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D DM42_5413 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D DM42_6876 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_5876 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_3546 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_5412 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_1419 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DM42_1418 gltD; glutamate synthase, NADH/NADPH, small subunit domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D DM42_6128 bacterial NAD-glutamate dehydrogenase family protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DM42_1174 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D DM42_1669 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D DM42_5906 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2016 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2923 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2938 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_429 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DM42_431 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DM42_5818 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D DM42_388 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_2246 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_2027 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_3866 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_4672 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_4088 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:bced00260] D DM42_3013 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D DM42_4100 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DM42_3246 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DM42_6459 homoserine dehydrogenase, NAD binding domain protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DM42_4188 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D DM42_3247 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D DM42_5306 beta-eliminating lyase family protein K01620 ltaE; threonine aldolase [EC:4.1.2.48] D DM42_5664 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DM42_1023 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DM42_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D DM42_6879 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D DM42_2104 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D DM42_3459 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D DM42_722 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D DM42_3173 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D DM42_2212 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DM42_1157 histidine phosphatase super family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DM42_1878 putative d-3-phosphoglycerate dehydrogenase oxidoreductase protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_5385 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_6234 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_785 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D DM42_3409 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D DM42_1024 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D DM42_5137 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D DM42_5136 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D DM42_1634 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D DM42_1632 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_1633 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D DM42_2801 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DM42_5647 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D DM42_4735 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D DM42_5648 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D DM42_5671 ring hydroxylating alpha subunit family protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D DM42_5672 2Fe-2S iron-sulfur cluster binding domain protein K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D DM42_5667 flavin oxidoreductase / NADH oxidase family protein K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3] D DM42_5668 4Fe-4S dicluster domain protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit D DM42_5669 electron transfer flavodomain protein K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha D DM42_5670 electron transfer flavodomain protein K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta D DM42_5599 sarcosine oxidase, alpha subunit K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D DM42_5597 sarcosine oxidase, beta subunit K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D DM42_5600 sarcosine oxidase, gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D DM42_5598 soxD; subunit delta of sarcosine oxidase K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D DM42_5596 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D DM42_1636 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D DM42_2336 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DM42_3151 psdht; phenylserine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DM42_6396 eutB; ectoine utilization protein EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DM42_463 sds; L-serine dehydratase/L-threonine deaminase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D DM42_2331 putative D-serine deaminase (D-serine dehydratase) protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D DM42_2945 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D DM42_4093 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D DM42_4095 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D DM42_6398 eutD; ectoine utilization protein EutD K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D DM42_6399 eutE; ectoine utilization protein EutE K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] D DM42_6402 aminotransferase K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D DM42_6401 aldehyde dehydrogenase family protein K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] C 00270 Cysteine and methionine metabolism [PATH:bced00270] D DM42_5094 bacterial transferase hexapeptide family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DM42_4551 bacterial transferase hexapeptide family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DM42_3004 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DM42_6484 cys/Met metabolism PLP-dependent enzyme family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DM42_3408 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DM42_4694 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DM42_2155 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DM42_2156 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DM42_5495 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D DM42_1929 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D DM42_5918 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D DM42_7018 putative spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D DM42_1206 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16] D DM42_5914 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16] D DM42_6081 autoinducer synthetase family protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D DM42_257 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D DM42_3310 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D DM42_3611 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_2856 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_6446 mdeA; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D DM42_572 GAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D DM42_1556 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D DM42_4767 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D DM42_3013 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D DM42_4100 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DM42_3246 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DM42_6459 homoserine dehydrogenase, NAD binding domain protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DM42_1913 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D DM42_4367 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D DM42_4087 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D DM42_2438 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DM42_1805 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D DM42_2205 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D DM42_2206 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D DM42_4180 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D DM42_2945 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D DM42_4121 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DM42_5596 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D DM42_1636 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D DM42_463 sds; L-serine dehydratase/L-threonine deaminase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D DM42_772 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D DM42_1878 putative d-3-phosphoglycerate dehydrogenase oxidoreductase protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_5385 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_6234 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_785 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:bced00280] D DM42_2438 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DM42_479 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D DM42_478 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D DM42_477 bkdB; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_3741 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_6699 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_2069 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_29 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_6391 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_4933 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_5037 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D DM42_5548 hypothetical protein K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_2353 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DM42_2072 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DM42_3114 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D DM42_3941 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D DM42_5801 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D DM42_3645 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_5800 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_6497 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_268 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_3940 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3646 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D DM42_5551 D-ala D-ala ligase family protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D DM42_5549 carboxyl transferase domain protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D DM42_6239 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D DM42_5550 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D DM42_3512 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DM42_5316 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DM42_2103 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DM42_235 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D DM42_234 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bced00290] D DM42_2336 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DM42_3151 psdht; phenylserine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DM42_6396 eutB; ectoine utilization protein EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D DM42_463 sds; L-serine dehydratase/L-threonine deaminase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D DM42_4103 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D DM42_4102 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D DM42_4101 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D DM42_2797 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_4269 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_6104 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_1639 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_2798 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DM42_2799 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D DM42_2606 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DM42_3831 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DM42_2438 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DM42_3245 aminotransferase class-V family protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D DM42_2802 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D DM42_4969 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D DM42_2257 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:bced00300] D DM42_3246 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DM42_6459 homoserine dehydrogenase, NAD binding domain protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DM42_3013 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D DM42_4100 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DM42_6575 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DM42_5219 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DM42_6448 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DM42_2117 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DM42_2993 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DM42_1192 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D DM42_6003 hypothetical protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D DM42_3069 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D DM42_2576 argD; transaminase, acetylornithine/succinylornithine family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DM42_3070 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D DM42_3067 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D DM42_1927 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DM42_5235 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DM42_5924 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DM42_4938 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DM42_6702 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DM42_2710 aminotransferase class I and II family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D DM42_4568 aminotransferase class I and II family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D DM42_1285 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DM42_1284 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:bced00310] D DM42_5513 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D DM42_188 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_1016 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2945 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D DM42_6876 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_5876 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_3546 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_5412 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_6532 hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D DM42_292 coA-transferase III family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D DM42_2179 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21] D DM42_5715 pyridine nucleotide-disulfide oxidoreductase family protein K26064 amaD; D-lysine oxidase D DM42_980 FAD binding domain protein K26064 amaD; D-lysine oxidase D DM42_3830 malate/L-lactate dehydrogenase family protein K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] D DM42_3604 ornithine cyclodeaminase/mu-crystallin family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5701 gamma-butyrobetaine dioxygenase K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1] C 00220 Arginine biosynthesis [PATH:bced00220] D DM42_2515 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D DM42_4341 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DM42_2640 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DM42_6767 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D DM42_2132 allophanate hydrolase subunit 1 family protein K01941 uca; urea carboxylase [EC:6.3.4.6] D DM42_6768 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D DM42_928 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D DM42_927 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D DM42_926 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D DM42_5818 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D DM42_5906 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2016 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2923 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2938 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_429 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DM42_431 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DM42_6128 bacterial NAD-glutamate dehydrogenase family protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DM42_1174 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D DM42_3245 aminotransferase class-V family protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D DM42_2931 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D DM42_1270 argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D DM42_1916 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D DM42_4547 putative acetylglutamate kinase-like protein K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D DM42_5129 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D DM42_1515 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D DM42_2576 argD; transaminase, acetylornithine/succinylornithine family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DM42_3152 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D DM42_7167 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:bced00330] D DM42_3629 peptidase M20/M25/M40 family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D DM42_2637 hypothetical protein K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D DM42_3980 adiA; biodegradative arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D DM42_6605 arginase family protein K01480 speB; agmatinase [EC:3.5.3.11] D DM42_473 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D DM42_6138 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D DM42_3981 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D DM42_7018 putative spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D DM42_1206 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16] D DM42_5914 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16] D DM42_5918 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D DM42_2015 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D DM42_6024 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D DM42_2924 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_1799 acetyltransferase domain protein K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D DM42_4734 speB; agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7] D DM42_5497 speB; agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7] D DM42_4449 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_6122 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_3543 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_4553 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_1553 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_3773 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_540 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D DM42_541 aruF; arginine/ornithine succinyltransferase, alpha subunit K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D DM42_538 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D DM42_542 astC; succinylornithine transaminase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D DM42_539 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D DM42_537 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D DM42_2008 FAD binding domain protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D DM42_1177 FAD binding domain protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D DM42_5904 FAD binding domain protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D DM42_5510 FAD binding domain protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D DM42_6411 FAD binding domain protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D DM42_2019 aldehyde dehydrogenase family protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D DM42_6650 pyridine nucleotide-disulfide oxidoreductase family protein K24954 ooxA; octopine oxidase subunit A D DM42_6652 FAD dependent oxidoreductase family protein K24955 ooxB; octopine oxidase subunit B D DM42_1109 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D DM42_1669 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D DM42_4486 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12] D DM42_1255 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D DM42_1186 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D DM42_5622 alpha/beta hydrolase fold family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5] D DM42_3851 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D DM42_2179 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21] D DM42_3601 putative proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D DM42_3604 ornithine cyclodeaminase/mu-crystallin family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] C 00340 Histidine metabolism [PATH:bced00340] D DM42_1397 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D DM42_3298 hisZ; ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D DM42_1388 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D DM42_1389 phosphoribosyl-AMP cyclohydrolase family protein K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D DM42_1391 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D DM42_1392 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D DM42_1390 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D DM42_1394 imidazoleglycerol-phosphate dehydratase family protein K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D DM42_1395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_2264 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_1396 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D DM42_6590 aromatic amino acid lyase family protein K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D DM42_2915 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D DM42_2917 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D DM42_2919 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D DM42_2920 hutF; formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D DM42_2921 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_1756 egtD; dimethylhistidine N-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:bced00350] D DM42_1395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_2264 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_3611 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_2856 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_3566 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D DM42_1508 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D DM42_1009 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D DM42_3819 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D DM42_2259 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D DM42_1008 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D DM42_2160 fumarylacetoacetate (FAA) hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D DM42_6023 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D DM42_5692 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D DM42_2465 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_664 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_6548 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_4877 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_3516 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_4353 hypothetical protein K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D DM42_4452 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D DM42_3718 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15] D DM42_3719 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D DM42_3717 5-carboxymethyl-2-hydroxymuconate isomerase family protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D DM42_3720 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D DM42_3721 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D DM42_3716 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D DM42_3715 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D DM42_6876 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_5876 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_3546 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_5412 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_7069 xylB; xylulokinase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D DM42_3821 gtdA; gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4] D DM42_6263 fumarylacetoacetate (FAA) hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] D DM42_3820 fumarylacetoacetate (FAA) hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] D DM42_5847 hypothetical protein K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-] C 00360 Phenylalanine metabolism [PATH:bced00360] D DM42_1702 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D DM42_6023 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D DM42_5692 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D DM42_1304 paaF; phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D DM42_6238 paaF; phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D DM42_1303 paaD; phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D DM42_1499 phenylacetic acid catabolic family protein K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D DM42_1500 phenylacetic acid degradation B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D DM42_1501 phenylacetic acid catabolic family protein K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D DM42_1502 paaJ; phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D DM42_1503 2Fe-2S iron-sulfur cluster binding domain protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D DM42_1302 paaB; phenylacetate degradation putative enoyl-CoA hydratase PaaB K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D DM42_2075 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_7296 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DM42_4434 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DM42_6237 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DM42_1395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_2264 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_3611 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_2856 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_5265 acetyltransferase domain protein K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D DM42_7069 xylB; xylulokinase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D DM42_3566 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D DM42_1508 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D DM42_1415 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D DM42_763 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D DM42_2179 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21] D DM42_5847 hypothetical protein K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-] D DM42_1113 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D DM42_4449 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_6122 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_3543 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_4553 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_1553 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_3773 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_2390 Rieske [2Fe-2S] domain , MocE subfamily protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D DM42_6096 rieske [2Fe-2S] domain protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D DM42_6108 pyridine nucleotide-disulfide oxidoreductase family protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D DM42_2391 pyridine nucleotide-disulfide oxidoreductase family protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D DM42_1012 FAD binding domain protein K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D DM42_370 FAD binding domain protein K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D DM42_5077 FAD binding domain protein K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D DM42_818 FAD binding domain protein K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] C 00380 Tryptophan metabolism [PATH:bced00380] D DM42_2490 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D DM42_3510 alpha/beta hydrolase fold family protein K01432 AFMID; arylformamidase [EC:3.5.1.9] D DM42_2492 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D DM42_2491 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D DM42_4994 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D DM42_188 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_1016 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5902 FAD binding domain protein K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4] D DM42_1138 nit2; nitrilase 2 K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D DM42_6468 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D DM42_4449 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_6122 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_3543 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_4553 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_1553 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_3773 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_7100 catalase family protein K03781 katE; catalase [EC:1.11.1.6] D DM42_4155 catalase family protein K03781 katE; catalase [EC:1.11.1.6] D DM42_1766 catalase family protein K03781 katE; catalase [EC:1.11.1.6] D DM42_6472 catalase family protein K03781 katE; catalase [EC:1.11.1.6] D DM42_1113 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bced00400] D DM42_1099 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D DM42_5226 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D DM42_1428 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D DM42_1235 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D DM42_5472 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D DM42_5471 xylose isomerase-like TIM barrel family protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D DM42_5473 shikimate dehydrogenase substrate binding domain protein K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D DM42_1229 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D DM42_6861 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D DM42_1429 shikimate kinase family protein K00891 aroK; shikimate kinase [EC:2.7.1.71] D DM42_782 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D DM42_240 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D DM42_1309 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DM42_1310 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D DM42_1311 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D DM42_4096 N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D DM42_1312 indole-3-glycerol phosphate synthase family protein K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D DM42_4093 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D DM42_4095 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D DM42_826 putative chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D DM42_784 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D DM42_783 prephenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D DM42_1672 bacterial extracellular solute-binding s, 3 family protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D DM42_1395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_2264 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_3611 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_2856 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_1702 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D DM42_2314 putative pteridine-dependent dioxygenase K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:bced00410] D DM42_2626 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D DM42_5413 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D DM42_7194 aminotransferase class-III family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_2627 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D DM42_7360 FAD dependent oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D DM42_7359 dihydroorotate dehydrogenase family domain protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D DM42_7357 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D DM42_4791 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_7361 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_6619 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_467 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_3869 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_3646 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_3645 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_5800 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_6497 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_268 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D DM42_3940 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:bced00430] D DM42_7382 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_2398 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_6047 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_3779 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_2188 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_3734 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D DM42_7194 aminotransferase class-III family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D DM42_6128 bacterial NAD-glutamate dehydrogenase family protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D DM42_3908 snoaL-like domain protein K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-] D DM42_3919 FAD binding domain protein K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-] D DM42_3909 xsc; sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D DM42_4865 phosphate acetyl/butaryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DM42_3910 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D DM42_4870 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:bced00440] D DM42_3846 aepX; phosphoenolpyruvate phosphomutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D DM42_3847 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] D DM42_1816 phnA; phosphonoacetate hydrolase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2] D DM42_5480 phnA; phosphonoacetate hydrolase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2] D DM42_3905 phnY; putative phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-] D DM42_5481 phnY; putative phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-] D DM42_1817 phnY; putative phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-] D DM42_1812 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D DM42_5475 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D DM42_3848 2-aminoethylphosphonate aminotransferase family protein K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] C 00450 Selenocompound metabolism [PATH:bced00450] D DM42_6484 cys/Met metabolism PLP-dependent enzyme family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DM42_3408 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DM42_4694 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DM42_2155 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DM42_2156 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DM42_5495 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D DM42_6446 mdeA; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D DM42_4548 sufS; cysteine desulfurase, SufS family protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D DM42_867 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D DM42_7236 FAD binding domain protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D DM42_2900 cysC; adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D DM42_2597 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D DM42_2596 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DM42_2901 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DM42_5416 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D DM42_4065 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D DM42_2632 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DM42_6414 tRNA synthetases class I family protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:bced00460] D DM42_2661 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D DM42_3760 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D DM42_1138 nit2; nitrilase 2 K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D DM42_6468 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D DM42_7382 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_2398 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_6047 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_3779 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_2188 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_3219 L-asparaginase, type II family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D DM42_3801 iaaA; isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D DM42_5664 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DM42_1023 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:bced00470] D DM42_3060 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DM42_3887 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DM42_2179 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21] D DM42_1278 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DM42_2945 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D DM42_5818 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D DM42_2870 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D DM42_1282 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DM42_2331 putative D-serine deaminase (D-serine dehydratase) protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D DM42_1927 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DM42_5235 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DM42_5924 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DM42_4938 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DM42_6702 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DM42_982 ornithine cyclodeaminase/mu-crystallin family protein K19744 dauB; L-arginine dehydrogenase [EC:1.4.1.25] D DM42_3601 putative proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D DM42_3826 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D DM42_3823 FAD binding domain protein K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-] D DM42_3825 FAD binding domain protein K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-] D DM42_3824 2Fe-2S iron-sulfur cluster binding domain protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma D DM42_6651 2Fe-2S iron-sulfur cluster binding domain protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma D DM42_3827 dihydrodipicolinate synthetase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D DM42_6642 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D DM42_3829 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D DM42_5460 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D DM42_1415 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D DM42_763 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:bced00480] D DM42_7382 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_2398 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_6047 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_3779 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_2188 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_2376 chaC-like family protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D DM42_4512 hydantoinase/oxoprolinase family protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] D DM42_1970 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D DM42_2135 lamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D DM42_1972 allophanate hydrolase subunit 1 family protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D DM42_1971 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D DM42_1711 ybdK; carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D DM42_1805 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D DM42_2205 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D DM42_2206 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D DM42_2602 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D DM42_1349 peptidase M1 family protein K01256 pepN; aminopeptidase N [EC:3.4.11.2] D DM42_814 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D DM42_2836 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4500 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_5333 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_5310 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4107 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_1146 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4208 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4386 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_1531 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4719 gstB; glutathione S-transferase GST-6.0 K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_2112 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_2120 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_1977 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4313 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_6539 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4573 gtt2; glutathione S-transferase 2 K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_2004 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D DM42_2543 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DM42_2544 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DM42_4145 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D DM42_5372 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DM42_874 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DM42_3064 glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D DM42_1274 ahpC/TSA family protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D DM42_3981 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D DM42_7018 putative spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D DM42_1206 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16] D DM42_5914 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:bced00511] D DM42_2249 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D DM42_3744 putative beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] C 00540 Lipopolysaccharide biosynthesis [PATH:bced00540] D DM42_3091 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D DM42_1273 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D DM42_1046 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D DM42_3089 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D DM42_3005 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D DM42_3092 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D DM42_2523 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D DM42_2284 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D DM42_2980 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D DM42_2283 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D DM42_2521 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D DM42_932 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D DM42_1928 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D DM42_3877 aspartyl/Asparaginyl beta-hydroxylase family protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D DM42_2255 lipid A 3-O-deacylase family protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D DM42_1538 SIS domain protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D DM42_775 rfaE; bifunctional protein RfaE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D DM42_2369 HAD hydrolase, family IIIA domain protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D DM42_7140 HAD hydrolase, IA, variant 1 family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D DM42_2165 rfaE; bifunctional protein RfaE K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D DM42_774 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D DM42_934 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D DM42_851 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D DM42_2436 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D DM42_2752 glycosyltransferase 9 family protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bced00541] D DM42_260 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DM42_4077 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DM42_939 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DM42_5966 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_4230 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_776 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DM42_958 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DM42_1057 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DM42_959 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DM42_1059 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DM42_957 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DM42_1056 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DM42_6581 rmlD substrate binding domain protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D DM42_956 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D DM42_1058 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D DM42_2577 2Fe-2S iron-sulfur cluster binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D DM42_1070 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_4232 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_3747 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_945 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DM42_4084 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D DM42_4085 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] D DM42_2028 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D DM42_381 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:bced00550] D DM42_1398 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DM42_3569 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DM42_2514 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DM42_1279 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D DM42_1282 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DM42_1285 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DM42_1278 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DM42_1284 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D DM42_3083 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DM42_401 bacitracin resistance BacA family protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DM42_913 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DM42_5123 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D DM42_1283 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DM42_1280 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DM42_1228 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D DM42_5342 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_3600 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_3149 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_1434 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_5525 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_6211 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D DM42_1898 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D DM42_1286 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DM42_3725 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DM42_2178 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DM42_2450 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:bced00552] D DM42_401 bacitracin resistance BacA family protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DM42_913 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DM42_5123 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:bced00543] D DM42_3864 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D DM42_5094 bacterial transferase hexapeptide family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DM42_4551 bacterial transferase hexapeptide family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DM42_3004 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:bced00730] D DM42_499 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D DM42_968 phosphomethylpyrimidine kinase family protein K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D DM42_3058 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D DM42_4355 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_4698 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_2962 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_1411 FAD dependent oxidoreductase family protein K03153 thiO; glycine oxidase [EC:1.4.3.19] D DM42_4176 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D DM42_1409 thiazole biosynthesis ThiG family protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D DM42_1408 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D DM42_4205 thiamine monophosphate synthase/TENI family protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D DM42_1212 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D DM42_751 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D DM42_4762 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DM42_4763 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DM42_2520 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:bced00740] D DM42_6077 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D DM42_884 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DM42_3564 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DM42_881 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D DM42_4499 HAD hydrolase, IA, variant 1 family protein K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D DM42_2383 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D DM42_885 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D DM42_4257 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D DM42_882 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D DM42_2556 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D DM42_4452 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D DM42_6527 msuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D DM42_5571 NADPH-dependent FMN reductase family protein K00299 ssuE; FMN reductase [EC:1.5.1.38] D DM42_1005 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D DM42_2828 NUDIX domain protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D DM42_5722 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DM42_1336 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:bced00750] D DM42_2500 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D DM42_4566 pyridoxamine 5'-phosphate oxidase family protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D DM42_555 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D DM42_4505 putative oxidoreductase YdbC K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D DM42_785 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D DM42_2363 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D DM42_689 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D DM42_3247 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:bced00760] D DM42_2563 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D DM42_6105 hypothetical protein K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D DM42_2561 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D DM42_2562 nadC; nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D DM42_4901 nicotinate phosphoribosyltransferase family protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D DM42_725 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D DM42_4682 5'-nucleotidase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D DM42_3277 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DM42_4786 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DM42_5920 bifunctional NMN adenylyltransferase/Nudix hydrolase K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] D DM42_2764 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D DM42_5503 nadE; NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D DM42_2663 nadE; NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D DM42_1214 ygaD; protein YgaD K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D DM42_3195 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D DM42_5921 nicotinate phosphoribosyltransferase family protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D DM42_1093 ATP-NAD kinase family protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D DM42_1141 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D DM42_1142 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D DM42_1140 NAD(P) transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D DM42_3944 [2Fe-2S] binding domain protein K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1] D DM42_7239 [2Fe-2S] binding domain protein K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1] D DM42_3943 cytochrome c family protein K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1] D DM42_3950 molybdopterin-binding domain of aldehyde dehydrogenase family protein K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1] D DM42_7240 molybdopterin-binding domain of aldehyde dehydrogenase family protein K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1] D DM42_3945 6-hydroxynicotinate 3-monooxygenase K14974 nicC; 6-hydroxynicotinate 3-monooxygenase [EC:1.14.13.114] D DM42_3948 peptidase, M29 family K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9] D DM42_3947 alpha/beta hydrolase fold family protein K15357 nicD; N-formylmaleamate deformylase [EC:3.5.1.106] D DM42_3949 isochorismatase family protein K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] D DM42_5718 asp/Glu/Hydantoin racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D DM42_3946 asp/Glu/Hydantoin racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D DM42_6876 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_5876 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_3546 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D DM42_5412 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:bced00770] D DM42_2797 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_4269 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_6104 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_1639 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DM42_2798 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DM42_2799 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D DM42_2606 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DM42_3831 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DM42_1083 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D DM42_4670 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D DM42_3171 2-dehydropantoate 2-reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D DM42_6857 2-dehydropantoate 2-reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D DM42_5981 2-dehydropantoate 2-reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D DM42_6749 ketopantoate reductase PanE/ApbA family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D DM42_2488 2-dehydropantoate 2-reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D DM42_2529 2-dehydropantoate 2-reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D DM42_2627 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D DM42_2167 coaX; pantothenate kinase, type III family protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D DM42_2553 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D DM42_2262 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D DM42_1265 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D DM42_688 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D DM42_2913 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D DM42_2438 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DM42_7360 FAD dependent oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D DM42_7359 dihydroorotate dehydrogenase family domain protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D DM42_7357 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D DM42_4791 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_7361 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_6619 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_467 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_3869 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D DM42_2626 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:bced00780] D DM42_2220 methyltransferase domain protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D DM42_2304 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D DM42_6948 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DM42_701 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DM42_2656 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6640 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2313 3-beta hydroxysteroid dehydrogenase/isomerase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2769 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_4450 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6002 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2588 rmlD substrate binding domain protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_282 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_703 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6333 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2691 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_4522 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_5394 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_3090 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DM42_6952 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DM42_2139 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D DM42_1045 aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D DM42_2140 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D DM42_2138 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D DM42_2137 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D DM42_2168 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:bced00785] D DM42_2183 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D DM42_3264 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D DM42_2184 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_6058 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_6436 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_2951 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D DM42_3263 acoC; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DM42_2952 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DM42_189 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D DM42_188 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DM42_479 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D DM42_478 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D DM42_477 bkdB; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D DM42_1634 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D DM42_1632 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DM42_1633 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:bced00790] D DM42_5092 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D DM42_6914 GTP cyclohydrolase I family protein K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D DM42_4175 folE2; GTP cyclohydrolase folE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D DM42_5450 type I GTP cyclohydrolase folE2 family protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D DM42_4762 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DM42_4763 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DM42_2348 NUDIX domain protein K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D DM42_5601 dihydroneopterin aldolase family protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D DM42_2030 FolB domain protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D DM42_1081 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D DM42_423 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D DM42_745 dihydrofolate reductase family protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D DM42_4091 folC; bifunctional FolC family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D DM42_6077 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D DM42_884 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DM42_3564 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DM42_1084 aminotransferase class IV family protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D DM42_1894 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D DM42_5451 6-pyruvoyl tetrahydropterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D DM42_1703 pterin 4 alpha carbinolamine dehydratase family protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D DM42_1702 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D DM42_1893 4Fe-4S single cluster domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D DM42_1892 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D DM42_2335 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D DM42_716 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DM42_7188 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DM42_2429 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D DM42_3250 moaE family protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D DM42_7189 moaE family protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D DM42_748 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D DM42_3248 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D DM42_718 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D DM42_7187 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D DM42_5990 mobA-like NTP transferase domain protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D DM42_717 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:bced00670] D DM42_745 dihydrofolate reductase family protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D DM42_2948 tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D DM42_5664 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DM42_1023 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DM42_2557 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D DM42_1151 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DM42_3239 formyl transferase family protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DM42_1884 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DM42_1632 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DM42_2155 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DM42_2156 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DM42_742 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D DM42_2289 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D DM42_5675 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D DM42_1554 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D DM42_1974 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:bced00860] D DM42_3036 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DM42_1332 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D DM42_5204 aminotransferase class-III family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DM42_880 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DM42_1443 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D DM42_2648 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D DM42_1671 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D DM42_2765 coproporphyrinogen III oxidase family protein K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D DM42_916 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D DM42_1185 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D DM42_5359 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D DM42_1091 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D DM42_2649 uroporphyrinogen-III synthase HemD family protein K13543 hemDX; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D DM42_2598 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D DM42_42 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D DM42_6268 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D DM42_2232 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D DM42_2231 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D DM42_2599 cbiX family protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D DM42_25 cobI; precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D DM42_23 cobG; precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D DM42_26 cobJ; precorrin-3B C17-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131] D DM42_19 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D DM42_43 cobalamin synthesis G family protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D DM42_20 precorrin-6x reductase CbiJ/CobK family protein K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D DM42_21 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D DM42_22 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D DM42_24 precorrin-8X methylmutase family protein K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D DM42_45 cobB/CobQ-like glutamine amidotransferase domain protein K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D DM42_39 cobN; cobaltochelatase, CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D DM42_3913 cobS; aerobic cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D DM42_3912 cobalamin biosynthesis CobT family protein K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D DM42_1103 cob(I)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D DM42_44 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D DM42_2622 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D DM42_2620 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D DM42_753 cobD/Cbib family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D DM42_2619 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D DM42_2621 cobinamide kinase / cobinamide phosphate guanyltransferase family protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D DM42_2616 cobalamin-5-phosphate synthase family protein K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D DM42_2615 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D DM42_2617 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D DM42_38 AAA domain family protein K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D DM42_1548 pyridoxamine 5'-phosphate oxidase family protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D DM42_2871 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bced00130] D DM42_2715 chorismate lyase family protein K03181 ubiC; chorismate lyase [EC:4.1.3.40] D DM42_2314 putative pteridine-dependent dioxygenase K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] D DM42_1110 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D DM42_889 ubiD; ubiD decarboxylase family protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D DM42_5722 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DM42_1336 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DM42_1318 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D DM42_789 ubiG; 3-demethylubiquinone-9 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D DM42_1148 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D DM42_2340 ubiquinone/menaquinone biosynthesis methyltransferase family protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D DM42_1290 ubiquinone biosynthesis COQ7 family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D DM42_5759 isochorismate synthase family protein K01851 pchA; salicylate biosynthesis isochorismate synthase [EC:5.4.4.2] D DM42_4284 NADPH-dependent FMN reductase family protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D DM42_7310 NADPH-dependent FMN reductase family protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D DM42_6563 wrbA; quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D DM42_245 wrbA; quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D DM42_1514 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D DM42_7066 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D DM42_5009 NAD dependent epimerase/dehydratase family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D DM42_3566 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D DM42_1508 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:bced00900] D DM42_4176 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D DM42_3085 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D DM42_3154 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D DM42_2269 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D DM42_3155 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D DM42_3288 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D DM42_2568 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D DM42_5246 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_4560 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D DM42_5722 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DM42_1336 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DM42_4177 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D DM42_5933 uppS; di-trans,poly-cis-decaprenylcistransferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D DM42_1259 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D DM42_3083 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DM42_750 peptidase M48 family protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:bced00909] D DM42_3690 squalene/phytoene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D DM42_5871 squalene/phytoene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D DM42_6654 shc; squalene-hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129] D DM42_5157 shc; squalene-hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:bced00906] D DM42_3163 hpnD; squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D DM42_3424 glycosyltransferase, MGT family protein K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:bced00903] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_2327 alpha/beta hydrolase fold family protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D DM42_6363 alpha/beta hydrolase fold family protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:bced00907] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_3512 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DM42_5316 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DM42_2103 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D DM42_2353 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DM42_2072 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D DM42_1205 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:bced00523] D DM42_958 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DM42_1057 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DM42_959 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DM42_1059 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DM42_957 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DM42_1056 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DM42_6581 rmlD substrate binding domain protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D DM42_956 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D DM42_1058 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:bced01053] D DM42_5759 isochorismate synthase family protein K01851 pchA; salicylate biosynthesis isochorismate synthase [EC:5.4.4.2] D DM42_5760 pchB; salicylate biosynthesis protein pchB K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] D DM42_5762 AMP-binding enzyme family protein K12238 pchD; salicylate---[aryl-carrier protein] ligase [EC:6.2.1.61] D DM42_5764 amino acid adenylation domain protein K12239 pchE; L-cysteine---[L-cysteinyl-carrier protein] ligase PchE [EC:6.2.1.69] D DM42_5765 amino acid adenylation domain protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69] D DM42_5766 thiazolinyl imide reductase family protein K12241 pchG; pyochelin biosynthesis protein PchG C 01055 Biosynthesis of vancomycin group antibiotics D DM42_959 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DM42_1059 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:bced00946] D DM42_2661 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D DM42_3760 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids [PATH:bced00996] D DM42_5195 P-hydroxycinnamoyl CoA hydratase/lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61] C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:bced00311] D DM42_4724 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase family protein K19200 IAL; isopenicillin-N N-acyltransferase like protein D DM42_5829 blaCTX; beta-lactamase CTX-M-27 K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:bced00332] D DM42_1255 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D DM42_1186 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:bced00261] D DM42_61 mbtH-like family protein K05375 mbtH; MbtH protein D DM42_2900 cysC; adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D DM42_2597 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D DM42_2596 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DM42_2901 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D DM42_3013 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D DM42_4100 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DM42_6575 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DM42_5219 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DM42_6448 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DM42_2117 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DM42_2993 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DM42_1192 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D DM42_6003 hypothetical protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:bced00521] D DM42_877 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D DM42_935 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DM42_3002 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D DM42_2385 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D DM42_272 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D DM42_958 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DM42_1057 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DM42_959 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DM42_1059 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DM42_957 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DM42_1056 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DM42_6581 rmlD substrate binding domain protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D DM42_956 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D DM42_1058 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D DM42_877 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:bced00525] D DM42_958 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DM42_1057 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DM42_959 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DM42_1059 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:bced00401] D DM42_783 prephenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D DM42_1395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_2264 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_3611 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_2856 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D DM42_1309 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DM42_1310 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D DM42_445 acyl transferase domain protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DM42_704 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DM42_2656 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6640 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2313 3-beta hydroxysteroid dehydrogenase/isomerase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2769 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_4450 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6002 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2588 rmlD substrate binding domain protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_282 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_703 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6333 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2691 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_4522 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_5394 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:bced00998] D DM42_2312 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein D DM42_702 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D DM42_6950 hypothetical protein K02078 acpP; acyl carrier protein D DM42_3846 aepX; phosphoenolpyruvate phosphomutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D DM42_3847 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] C 00999 Biosynthesis of various plant secondary metabolites [PATH:bced00999] D DM42_1929 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D DM42_1229 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D DM42_6861 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D DM42_2661 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D DM42_3760 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites [PATH:bced00997] D DM42_6412 pyridine nucleotide-disulfide oxidoreductase family protein K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59] D DM42_48 acetyltransferase domain protein K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102] D DM42_52 acetyltransferase domain protein K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:bced00362] D DM42_7060 cbdA; 2-halobenzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D DM42_7059 benB; benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D DM42_7058 2Fe-2S iron-sulfur cluster binding domain protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D DM42_7057 short chain dehydrogenase family protein K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D DM42_7061 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D DM42_4282 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D DM42_7062 catB; muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D DM42_4281 catB; muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D DM42_4283 catC; muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D DM42_5086 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D DM42_5089 pcaI; 3-oxoadipate CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D DM42_5088 pcaJ; 3-oxoadipate CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D DM42_2353 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DM42_2072 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DM42_1301 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D DM42_5405 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D DM42_5003 phenol hydroxylase subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D DM42_5002 phL; phenol hydroxylase component phL K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D DM42_5001 dmpM; phenol hydroxylase P2 protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D DM42_5000 phN; phenol hydroxylase component phN K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D DM42_4999 phO; phenol hydroxylase component phO K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D DM42_4998 dmpP; phenol hydroxylase P5 protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D DM42_4996 catechol 2,3 dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D DM42_4988 xylF; 2-hydroxymuconic semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D DM42_4993 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D DM42_6345 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D DM42_4991 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D DM42_6343 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D DM42_4992 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D DM42_6344 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D DM42_4994 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D DM42_4989 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_6662 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_6129 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_4200 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_4444 dmpI; 4-oxalocrotonate tautomerase domain protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_4990 dmpH; 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D DM42_367 chqB; hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D DM42_369 tfdF; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D DM42_4687 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D DM42_3793 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D DM42_3792 pcaH; protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D DM42_5087 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D DM42_6658 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D DM42_5085 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D DM42_3257 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D DM42_4393 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D DM42_3878 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D DM42_7334 ligJ; 4-oxalomesaconate hydratase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83] D DM42_7333 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D DM42_6108 pyridine nucleotide-disulfide oxidoreductase family protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D DM42_2391 pyridine nucleotide-disulfide oxidoreductase family protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D DM42_4598 fdx; ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S D DM42_2967 fdx; ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S D DM42_5090 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D DM42_3818 mhbM; 3-hydroxybenzoate 6-hydroxylase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24] D DM42_7193 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K07536 badI; 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-] D DM42_2352 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DM42_3194 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DM42_2190 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D DM42_1016 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_7296 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DM42_4434 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DM42_6237 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:bced00627] D DM42_5881 FAD dependent oxidoreductase family protein K10215 ethA; monooxygenase [EC:1.14.13.-] D DM42_4391 ethA; FAD-containing monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-] D DM42_4449 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_6122 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_3543 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_4553 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_1553 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_3773 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_1138 nit2; nitrilase 2 K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D DM42_6468 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D DM42_5250 acylphosphatase family protein K01512 acyP; acylphosphatase [EC:3.6.1.7] D DM42_2486 mdlC; benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7] D DM42_7068 xylC; benzaldehyde dehydrogenase [NAD+] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D DM42_2487 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D DM42_5722 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DM42_1336 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DM42_4276 ring hydroxylating alpha subunit family protein K16319 andAc; anthranilate 1,2-dioxygenase large subunit [EC:1.14.12.1] D DM42_4275 ring hydroxylating beta subunit K16320 andAd; anthranilate 1,2-dioxygenase small subunit [EC:1.14.12.1] D DM42_4274 rieske [2Fe-2S] domain protein K18248 andAb; anthranilate 1,2-dioxygenase ferredoxin component D DM42_4273 thcD; rhodocoxin reductase K18249 andAa; anthranilate 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.-] D DM42_5196 aldehyde dehydrogenase family protein K21802 vdh; vanillin dehydrogenase [EC:1.2.1.67] D DM42_5545 ring hydroxylating alpha subunit family protein K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D DM42_5544 2Fe-2S iron-sulfur cluster binding domain protein K03863 vanB; vanillate monooxygenase ferredoxin subunit D DM42_7336 ligB; protocatechuate 4,5-dioxygenase beta chain domain protein K04099 desB; gallate dioxygenase [EC:1.13.11.57] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D DM42_5902 FAD binding domain protein K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4] C 00364 Fluorobenzoate degradation [PATH:bced00364] D DM42_7060 cbdA; 2-halobenzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D DM42_7059 benB; benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D DM42_7058 2Fe-2S iron-sulfur cluster binding domain protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D DM42_7057 short chain dehydrogenase family protein K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D DM42_7061 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D DM42_4282 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D DM42_3491 X-Pro dipeptidyl-peptidase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_7394 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_6812 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_4181 chlorophyllase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_1552 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_7062 catB; muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D DM42_4281 catB; muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D DM42_369 tfdF; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D DM42_4687 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00625 Chloroalkane and chloroalkene degradation [PATH:bced00625] D DM42_6548 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_4877 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_3516 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_2465 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_664 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_2657 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6772 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6612 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_3430 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_6890 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DM42_5657 fdhA; glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D DM42_674 fdhA; glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D DM42_5620 PQQ-dependent dehydrogenase, methanol/ethanol family protein K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D DM42_2098 alpha/beta hydrolase fold family protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D DM42_7259 alpha/beta hydrolase fold family protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D DM42_6881 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D DM42_1327 HAD hydrolase, IA, variant 3 family protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D DM42_3936 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D DM42_3048 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:bced00361] D DM42_5003 phenol hydroxylase subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D DM42_5002 phL; phenol hydroxylase component phL K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D DM42_5001 dmpM; phenol hydroxylase P2 protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D DM42_5000 phN; phenol hydroxylase component phN K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D DM42_4999 phO; phenol hydroxylase component phO K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D DM42_4998 dmpP; phenol hydroxylase P5 protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D DM42_7061 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D DM42_4282 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D DM42_3491 X-Pro dipeptidyl-peptidase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_7394 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_6812 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_4181 chlorophyllase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_1552 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_369 tfdF; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D DM42_4687 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D DM42_367 chqB; hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D DM42_7062 catB; muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D DM42_4281 catB; muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D DM42_4996 catechol 2,3 dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D DM42_6881 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D DM42_1327 HAD hydrolase, IA, variant 3 family protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D DM42_3936 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D DM42_3048 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D DM42_2098 alpha/beta hydrolase fold family protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D DM42_7259 alpha/beta hydrolase fold family protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00623 Toluene degradation [PATH:bced00623] D DM42_5003 phenol hydroxylase subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D DM42_5002 phL; phenol hydroxylase component phL K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D DM42_5001 dmpM; phenol hydroxylase P2 protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D DM42_5000 phN; phenol hydroxylase component phN K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D DM42_4999 phO; phenol hydroxylase component phO K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D DM42_4998 dmpP; phenol hydroxylase P5 protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D DM42_7069 xylB; xylulokinase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D DM42_7068 xylC; benzaldehyde dehydrogenase [NAD+] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D DM42_2487 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D DM42_7061 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D DM42_4282 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D DM42_7062 catB; muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D DM42_4281 catB; muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D DM42_3491 X-Pro dipeptidyl-peptidase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_7394 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_6812 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_4181 chlorophyllase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_1552 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D DM42_369 tfdF; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D DM42_4687 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00622 Xylene degradation [PATH:bced00622] D DM42_7069 xylB; xylulokinase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D DM42_7068 xylC; benzaldehyde dehydrogenase [NAD+] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D DM42_2487 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D DM42_7060 cbdA; 2-halobenzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D DM42_7059 benB; benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D DM42_7058 2Fe-2S iron-sulfur cluster binding domain protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D DM42_7057 short chain dehydrogenase family protein K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D DM42_4996 catechol 2,3 dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D DM42_4988 xylF; 2-hydroxymuconic semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D DM42_4994 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D DM42_4989 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_6662 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_6129 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_4200 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_4444 dmpI; 4-oxalocrotonate tautomerase domain protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_4990 dmpH; 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D DM42_4993 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D DM42_6345 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D DM42_4991 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D DM42_6343 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D DM42_4992 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D DM42_6344 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00633 Nitrotoluene degradation [PATH:bced00633] D DM42_5366 oxidoreductase, FMN-binding protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D DM42_482 flavin oxidoreductase / NADH oxidase family protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D DM42_7243 morB; morphinone reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D DM42_2353 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D DM42_2072 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:bced00643] D DM42_6023 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D DM42_5692 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D DM42_1009 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D DM42_3819 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D DM42_2259 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D DM42_1008 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D DM42_2160 fumarylacetoacetate (FAA) hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D DM42_4449 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_6122 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_3543 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_4553 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_1553 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_3773 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D DM42_1138 nit2; nitrilase 2 K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D DM42_6468 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D DM42_4996 catechol 2,3 dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D DM42_4988 xylF; 2-hydroxymuconic semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D DM42_6323 putative glutaconate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation [PATH:bced00791] D DM42_6768 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D DM42_3489 isochorismatase family protein K23359 biuH; biuret amidohydrolase [EC:3.5.1.84] D DM42_6767 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D DM42_2132 allophanate hydrolase subunit 1 family protein K01941 uca; urea carboxylase [EC:6.3.4.6] D DM42_928 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D DM42_927 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D DM42_926 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:bced00930] D DM42_2413 thiJ/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D DM42_859 fatty acid desaturase family protein K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D DM42_5386 strictosidine synthase family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D DM42_2327 alpha/beta hydrolase fold family protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D DM42_6363 alpha/beta hydrolase fold family protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D DM42_1299 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation D DM42_5110 cupin domain protein K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41] D DM42_3651 hypothetical protein K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41] C 00621 Dioxin degradation [PATH:bced00621] D DM42_4989 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_6662 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_6129 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_4200 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_4444 dmpI; 4-oxalocrotonate tautomerase domain protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D DM42_4990 dmpH; 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D DM42_4993 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D DM42_6345 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D DM42_4991 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D DM42_6343 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D DM42_4992 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D DM42_6344 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00626 Naphthalene degradation [PATH:bced00626] D DM42_6548 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_4877 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_3516 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D DM42_2465 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D DM42_664 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D DM42_3793 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D DM42_3792 pcaH; protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation [PATH:bced00984] D DM42_6312 kstD; 3-oxosteroid 1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D DM42_6338 kshA; 3-ketosteroid-9-alpha-hydroxylase oxygenase subunit K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D DM42_6314 hmp; flavohemoprotein K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30] D DM42_6311 hypothetical protein K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] D DM42_6321 hsaC; iron-dependent extradiol dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25] D DM42_6349 alpha/beta hydrolase fold family protein K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17] D DM42_6315 AMP-binding enzyme family protein K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41] D DM42_5239 snoaL-like domain protein K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1] D DM42_6385 FAD binding domain protein K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:bced03020] D DM42_1481 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DM42_1480 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DM42_1447 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DM42_836 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D DM42_3573 DEAD_2 family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:bced03010] D DM42_780 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D DM42_3079 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D DM42_1467 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D DM42_1448 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D DM42_1456 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D DM42_3227 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DM42_1477 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D DM42_1459 ribosomal S8 family protein K02994 RP-S8; small subunit ribosomal protein S8 D DM42_1162 ribosomal S9/S16 family protein K02996 RP-S9; small subunit ribosomal protein S9 D DM42_1474 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D DM42_1449 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D DM42_1478 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D DM42_1450 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D DM42_1460 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14 D DM42_2807 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D DM42_758 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DM42_1464 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D DM42_3229 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DM42_1469 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D DM42_2517 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D DM42_4172 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DM42_6740 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DM42_1586 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DM42_1484 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D DM42_1470 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D DM42_1473 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D DM42_1472 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D DM42_1461 ribosomal L5 family protein K02931 RP-L5; large subunit ribosomal protein L5 D DM42_1458 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D DM42_1482 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DM42_3230 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D DM42_1483 ribosomal L10 family protein K02864 RP-L10; large subunit ribosomal protein L10 D DM42_1485 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D DM42_1163 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D DM42_1463 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D DM42_1454 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D DM42_1466 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D DM42_1446 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D DM42_1457 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D DM42_755 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D DM42_222 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D DM42_1258 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DM42_1468 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DM42_1471 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D DM42_1462 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D DM42_2266 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D DM42_1257 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D DM42_2565 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D DM42_1465 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D DM42_1455 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D DM42_3267 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D DM42_707 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D DM42_2564 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DM42_1787 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D DM42_223 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D DM42_1451 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D DM42_1768 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_5483 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_2845 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_7374 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_1497 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_1298 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_1769 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_5486 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_2848 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_7371 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_1295 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_1494 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_1770 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_2849 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_5487 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_1493 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_7370 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_1294 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:bced00970] D DM42_1535 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_3037 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_1296 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_5485 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_2847 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_7372 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_1495 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_1625 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_2697 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_832 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_834 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_833 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_727 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DM42_728 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DM42_3041 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DM42_3039 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DM42_3043 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DM42_3179 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DM42_579 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D DM42_2268 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DM42_3038 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DM42_3040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DM42_3042 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DM42_907 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DM42_580 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DM42_681 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DM42_680 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DM42_1491 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DM42_123 tRNA-His K14226 tRNA-His; tRNA His D DM42_1297 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DM42_2846 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DM42_5484 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DM42_7373 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DM42_1496 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DM42_2590 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_2812 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_5775 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_3164 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_149 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_151 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_1875 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DM42_1032 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DM42_2943 tRNA-Met K14230 tRNA-Met; tRNA Met D DM42_135 tRNA-Met K14230 tRNA-Met; tRNA Met D DM42_2692 tRNA-Met K14230 tRNA-Met; tRNA Met D DM42_2416 tRNA-Met K14230 tRNA-Met; tRNA Met D DM42_4168 tRNA-Met K14230 tRNA-Met; tRNA Met D DM42_1891 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D DM42_1260 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DM42_214 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DM42_411 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DM42_3014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DM42_860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DM42_2881 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DM42_842 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DM42_1375 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DM42_1490 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DM42_816 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DM42_1488 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D DM42_1492 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D DM42_226 tRNA-Val K14237 tRNA-Val; tRNA Val D DM42_1761 tRNA-Val K14237 tRNA-Val; tRNA Val D DM42_2925 tRNA-Val K14237 tRNA-Val; tRNA Val D DM42_3178 tRNA-Val K14237 tRNA-Val; tRNA Val D DM42_3036 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DM42_5730 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DM42_4925 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DM42_1903 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DM42_807 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DM42_1904 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D DM42_1902 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D DM42_295 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DM42_291 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DM42_2347 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DM42_2371 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D DM42_2370 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D DM42_225 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DM42_861 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DM42_4065 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D DM42_3009 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DM42_2632 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DM42_6414 tRNA synthetases class I family protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DM42_3239 formyl transferase family protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DM42_1884 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DM42_259 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DM42_1189 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DM42_2555 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DM42_2970 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DM42_2152 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DM42_1252 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DM42_3289 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DM42_221 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DM42_220 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DM42_1159 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DM42_2991 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DM42_7181 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:bced03060] D DM42_1453 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D DM42_1487 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D DM42_2811 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D DM42_1121 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D DM42_1122 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D DM42_1120 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D DM42_1790 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D DM42_1271 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DM42_2215 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D DM42_1249 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DM42_2260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DM42_1385 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA D DM42_1384 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D DM42_1383 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D DM42_693 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D DM42_2554 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D DM42_596 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:bced04122] D DM42_4355 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_4698 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_2962 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_4180 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D DM42_266 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D DM42_1144 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DM42_3250 moaE family protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D DM42_7189 moaE family protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D DM42_716 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DM42_7188 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DM42_3249 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein D DM42_7190 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein D DM42_5584 putative thiamine S protein K03636 moaD; sulfur-carrier protein D DM42_2210 thiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D DM42_2429 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D DM42_748 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D DM42_1410 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:bced03018] D DM42_1253 NUDIX domain protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D DM42_715 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12] D DM42_2981 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DM42_2808 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DM42_2400 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DM42_5174 DEAD/DEAH box helicase family protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DM42_2742 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DM42_147 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DM42_1479 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DM42_3271 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D DM42_1086 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DM42_969 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_4839 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_7324 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_4542 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_3293 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D DM42_165 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D DM42_414 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D DM42_3765 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D DM42_1080 pcnB; poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:bced03030] D DM42_437 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_3110 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_827 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_2745 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DM42_3273 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DM42_3209 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DM42_1187 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DM42_2603 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D DM42_1785 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DM42_3231 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D DM42_4170 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D DM42_2293 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_591 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_436 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DM42_3093 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D DM42_4183 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DM42_3074 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:bced03410] D DM42_2731 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D DM42_1314 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D DM42_2273 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D DM42_2295 DNA-3-methyladenine glycosylase family protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D DM42_2272 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D DM42_1804 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D DM42_3010 hhH-GPD superbase excision DNA repair family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D DM42_4667 hypothetical protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D DM42_1583 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D DM42_2294 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D DM42_7117 uracil-DNA glycosylase, 4 family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D DM42_3056 uracil-DNA glycosylase, 4 family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D DM42_1906 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D DM42_2942 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D DM42_4183 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DM42_2972 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DM42_3074 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:bced03420] D DM42_3153 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D DM42_2291 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D DM42_6734 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D DM42_657 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D DM42_670 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D DM42_2857 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D DM42_683 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D DM42_258 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DM42_624 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DM42_4183 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DM42_3074 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DM42_3573 DEAD_2 family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:bced03430] D DM42_2999 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DM42_1072 mutL; DNA mismatch repair MutL family protein K03572 mutL; DNA mismatch repair protein MutL D DM42_258 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DM42_624 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DM42_2524 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DM42_4178 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DM42_2972 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DM42_2293 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_591 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_2745 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DM42_1785 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DM42_3273 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DM42_1187 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DM42_3209 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DM42_437 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_3110 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_827 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_2603 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D DM42_3074 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:bced03440] D DM42_2972 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DM42_2293 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_591 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_690 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D DM42_3275 recR; recombination protein RecR K06187 recR; recombination protein RecR D DM42_2420 recA; protein RecA K03553 recA; recombination protein RecA D DM42_4183 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DM42_1153 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D DM42_1154 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D DM42_1152 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D DM42_1117 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D DM42_506 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D DM42_507 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D DM42_505 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DM42_2745 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DM42_1785 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DM42_3273 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DM42_1187 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DM42_3209 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DM42_437 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_3110 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_827 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_2603 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D DM42_1670 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D DM42_3228 putative primosomal replication protein n K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining [PATH:bced03450] D DM42_7099 Ku protein K10979 ku; DNA end-binding protein Ku D DM42_7098 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:bced03250] D DM42_3007 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:bced02010] D DM42_2118 sbp; sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D DM42_96 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D DM42_95 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D DM42_94 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D DM42_93 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D DM42_2185 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein D DM42_2187 binding--dependent transport system inner membrane component family protein K15552 tauC; taurine transport system permease protein D DM42_2186 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D DM42_150 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_7400 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_6974 bacterial extracellular solute-binding s, 3 family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3965 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3973 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_6837 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_4535 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3702 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3961 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3520 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_1744 bacterial extracellular solute-binding s, 3 family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_4473 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3698 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_6983 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3119 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3699 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_129 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_3966 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_3967 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_6836 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_4536 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_4538 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_6981 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_1746 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_3118 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_128 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_3968 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_6835 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_6982 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_3700 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_1745 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_3117 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_7332 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein D DM42_4195 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D DM42_6894 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein D DM42_4196 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D DM42_4197 ABC transporter family protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D DM42_1815 putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D DM42_511 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein D DM42_3708 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein D DM42_1813 putative 2-aminoethylphosphonate ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D DM42_512 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein D DM42_3709 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein D DM42_1814 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D DM42_513 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D DM42_3710 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D DM42_2014 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein D DM42_3437 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein D DM42_6597 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein D DM42_4726 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein D DM42_2011 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein D DM42_3440 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein D DM42_2012 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein D DM42_3439 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein D DM42_2013 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D DM42_3438 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D DM42_5476 phnS; 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein D DM42_5479 phnV; 2-aminoethylphosphonate ABC transport system, membrane component PhnV K11082 phnV; 2-aminoethylphosphonate transport system permease protein D DM42_5478 phnU; 2-aminoethylphosphonate ABC transporter, permease protein K11083 phnU; 2-aminoethylphosphonate transport system permease protein D DM42_5477 phnT; 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein D DM42_5696 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DM42_5673 substrate binding domain of ABC-type glycine betaine transport system family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DM42_5678 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DM42_5579 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DM42_4741 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DM42_5577 choW; choline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein D DM42_5576 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D DM42_6603 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein D DM42_5607 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein D DM42_6602 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein D DM42_6604 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein D DM42_5604 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein D DM42_5606 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein D DM42_6601 proV; glycine betaine/L-proline transport ATP binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D DM42_5605 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D DM42_2478 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_5182 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_6819 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_870 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_5057 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_2474 bacterial extracellular solute-binding family protein K10227 smoE; polyol transport system substrate-binding protein D DM42_2475 binding--dependent transport system inner membrane component family protein K10228 smoF; polyol transport system permease protein D DM42_2476 binding--dependent transport system inner membrane component family protein K10229 smoG; polyol transport system permease protein D DM42_1403 putative signal peptide protein K07323 mlaC; phospholipid transport system substrate-binding protein D DM42_5161 putative signal peptide protein K07323 mlaC; phospholipid transport system substrate-binding protein D DM42_1405 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DM42_2173 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DM42_1406 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DM42_2171 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DM42_1402 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein D DM42_1407 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DM42_2172 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DM42_873 putative sugar-binding periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D DM42_872 binding--dependent transport system inner membrane component family protein K17316 gtsB; glucose/mannose transport system permease protein D DM42_871 binding--dependent transport system inner membrane component family protein K17317 gtsC; glucose/mannose transport system permease protein D DM42_155 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_5711 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_91 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_5983 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_154 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein D DM42_5710 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein D DM42_89 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein D DM42_5985 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein D DM42_90 ccmA; heme ABC exporter, ATP-binding protein CcmA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D DM42_153 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D DM42_5709 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D DM42_5984 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D DM42_5190 periplasmic binding s and sugar binding domain of LacI family protein K10537 araF; L-arabinose transport system substrate-binding protein D DM42_1221 periplasmic binding s and sugar binding domain of LacI family protein K10537 araF; L-arabinose transport system substrate-binding protein D DM42_5192 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein D DM42_1219 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein D DM42_5191 ccmA; heme ABC exporter, ATP-binding protein CcmA K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D DM42_1220 araG; arabinose import ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D DM42_6723 periplasmic binding s and sugar binding domain of LacI family protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D DM42_4321 periplasmic binding s and sugar binding domain of LacI family protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D DM42_6726 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein D DM42_4319 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein D DM42_4318 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein D DM42_6725 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein D DM42_4320 ABC transporter family protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D DM42_6724 ABC transporter family protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D DM42_6851 xylF; 2-hydroxymuconic semialdehyde hydrolase K10543 xylF; D-xylose transport system substrate-binding protein D DM42_6853 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein D DM42_6852 xylG; D-xylose ABC transporter, ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D DM42_276 periplasmic binding s and sugar binding domain of LacI family protein K17213 K17213; inositol transport system substrate-binding protein D DM42_274 branched-chain amino acid transport system / permease component family protein K17214 K17214; inositol transport system permease protein D DM42_275 ABC transporter family protein K17215 K17215; inositol transport system ATP-binding protein D DM42_1426 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D DM42_1425 binding--dependent transport system inner membrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D DM42_1424 binding--dependent transport system inner membrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D DM42_1423 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D DM42_421 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D DM42_420 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D DM42_419 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D DM42_418 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DM42_981 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_536 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_5355 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_4213 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_1657 bacterial extracellular solute-binding s, 3 family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_6649 bacterial extracellular solute-binding s, 3 family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_5402 bacterial extracellular solute-binding s, 3 family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_4328 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_6452 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_2669 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein D DM42_546 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein D DM42_4326 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein D DM42_6454 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein D DM42_2670 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein D DM42_547 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein D DM42_4327 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein D DM42_6453 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein D DM42_2668 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D DM42_545 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D DM42_4325 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D DM42_6455 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D DM42_2671 lysine-arginine-ornithine-binding periplasmic family protein K10014 hisJ; histidine transport system substrate-binding protein D DM42_5214 lysine-arginine-ornithine-binding periplasmic family protein K10014 hisJ; histidine transport system substrate-binding protein D DM42_3883 Tat (twin-arginine translocation) pathway signal sequence domain protein K10036 glnH; glutamine transport system substrate-binding protein D DM42_3882 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10037 glnP; glutamine transport system permease protein D DM42_3881 ABC transporter family protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D DM42_1173 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D DM42_2914 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D DM42_1171 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein D DM42_1172 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein D DM42_1170 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D DM42_6586 bacterial extracellular solute-binding s, 3 family protein K10018 occT; octopine/nopaline transport system substrate-binding protein D DM42_6588 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10019 occM; octopine/nopaline transport system permease protein D DM42_6587 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10020 occQ; octopine/nopaline transport system permease protein D DM42_6589 ABC transporter family protein K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1] D DM42_6441 bacterial extracellular solute-binding s, 3 family protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D DM42_6443 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09970 aapQ; general L-amino acid transport system permease protein D DM42_6444 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09971 aapM; general L-amino acid transport system permease protein D DM42_6445 ABC transporter family protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D DM42_140 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_1818 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_1373 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_4695 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_141 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10009 tcyB; L-cystine transport system permease protein D DM42_4696 yecS; inner membrane amino-acid ABC transporter permease protein yecS K10009 tcyB; L-cystine transport system permease protein D DM42_1821 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D DM42_4697 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D DM42_557 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_2806 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4976 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_2591 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4480 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_5743 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_6614 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1695 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1668 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1691 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1550 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_3871 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_3777 amiC; aliphatic amidase expression-regulating protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4642 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_6534 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_3602 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_5468 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4479 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_2570 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_5744 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_6615 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_286 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_1694 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_1690 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_1689 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_5745 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_6616 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_285 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_1693 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_2571 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_4478 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_2572 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_5746 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_6617 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_284 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_1697 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_5747 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_6618 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_283 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_1696 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_2573 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_4477 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_1688 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_5353 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein D DM42_2236 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein D DM42_5443 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein D DM42_766 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein D DM42_4519 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein D DM42_5446 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein D DM42_767 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein D DM42_5445 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein D DM42_768 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein D DM42_920 periplasmic binding domain protein K11959 urtA; urea transport system substrate-binding protein D DM42_4926 periplasmic binding domain protein K11959 urtA; urea transport system substrate-binding protein D DM42_921 urtB; urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein D DM42_4930 branched-chain amino acid transport system / permease component family protein K11960 urtB; urea transport system permease protein D DM42_922 urtC; urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein D DM42_4929 branched-chain amino acid transport system / permease component family protein K11961 urtC; urea transport system permease protein D DM42_4928 ABC transporter family protein K11962 urtD; urea transport system ATP-binding protein D DM42_923 urtD; urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D DM42_4927 ABC transporter family protein K11963 urtE; urea transport system ATP-binding protein D DM42_924 urtE; urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D DM42_5256 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DM42_5257 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein D DM42_5258 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein D DM42_5259 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein D DM42_5260 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein D DM42_3971 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein D DM42_1964 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein D DM42_2148 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein D DM42_1965 binding--dependent transport system inner membrane component family protein K12369 dppB; dipeptide transport system permease protein D DM42_1966 binding--dependent transport system inner membrane component family protein K12370 dppC; dipeptide transport system permease protein D DM42_1967 hypothetical protein K12371 dppD; dipeptide transport system ATP-binding protein D DM42_1968 hypothetical protein K12372 dppF; dipeptide transport system ATP-binding protein D DM42_3799 bacterial extracellular solute-binding s, 5 Middle family protein K13889 gsiB; glutathione transport system substrate-binding protein D DM42_3798 binding--dependent transport system inner membrane component family protein K13890 gsiC; glutathione transport system permease protein D DM42_3797 gsiD; glutathione transport system permease protein gsiD K13891 gsiD; glutathione transport system permease protein D DM42_3800 nikE; nickel import ATP-binding protein NikE K13892 gsiA; glutathione transport system ATP-binding protein D DM42_3479 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein D DM42_3030 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein D DM42_3480 binding--dependent transport system inner membrane component family protein K13894 yejB; microcin C transport system permease protein D DM42_3031 binding--dependent transport system inner membrane component family protein K13894 yejB; microcin C transport system permease protein D DM42_3481 binding--dependent transport system inner membrane component family protein K13895 yejE; microcin C transport system permease protein D DM42_3032 binding--dependent transport system inner membrane component family protein K13895 yejE; microcin C transport system permease protein D DM42_3482 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein D DM42_3033 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein D DM42_56 periplasmic binding family protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D DM42_58 fecCD transport family protein K23228 fhuB; ferric hydroxamate transport system permease protein D DM42_59 ABC transporter family protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D DM42_1064 putative capsule export inner-membrane protein CtrB K10107 kpsE; capsular polysaccharide transport system permease protein D DM42_1063 ABC-2 type transporter family protein K09688 kpsM; capsular polysaccharide transport system permease protein D DM42_1062 ABC transporter family protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D DM42_953 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein D DM42_952 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D DM42_102 ABC-2 type transporter, NodJ family protein K09694 nodJ; lipooligosaccharide transport system permease protein D DM42_101 nodI; nodulation ABC transporter NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein D DM42_5612 liporeleasing system, transmembrane , LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein D DM42_2974 liporeleasing system, transmembrane , LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein D DM42_2975 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D DM42_2601 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D DM42_2600 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D DM42_2280 ABC transporter family protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D DM42_2746 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D DM42_3769 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D DM42_2358 ABC transporter family protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D DM42_6554 ABC transporter family protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D DM42_5855 type I secretion system ATPase family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D DM42_3785 type I secretion system ATPase family protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D DM42_3884 msbA; lipid A export permease/ATP-binding protein MsbA K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD D DM42_5807 macB; macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D DM42_55 cyclic peptide transporter family protein K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D DM42_1412 ABC transporter family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:bced02060] D DM42_2209 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D DM42_7021 PTS HPr component phosphorylation site family protein K02784 ptsH; phosphocarrier protein HPr D DM42_2208 phosphocarrier, HPr family protein K02784 ptsH; phosphocarrier protein HPr D DM42_2248 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D DM42_2207 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DM42_2247 ptsP; phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D DM42_2277 band 3 cytoplasmic domain protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D DM42_4546 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:bced03070] D DM42_3772 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_3786 type I secretion outer membrane , TolC family protein K12340 tolC; outer membrane protein D DM42_6085 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_5945 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C D DM42_5949 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J D DM42_5959 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R D DM42_5944 type III secretion , HrpO family protein K03227 yscS; type III secretion protein S D DM42_5954 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T D DM42_5955 flhB HrpN YscU SpaS family protein K03229 yscU; type III secretion protein U D DM42_5943 type III secretion , HrcV family protein K03230 yscV; type III secretion protein V D DM42_5952 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D DM42_5960 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q D DM42_5951 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L D DM42_1717 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D D DM42_1720 type IV pilus biogenesis family protein K02452 gspC; general secretion pathway protein C D DM42_1719 gspF; type II secretion system protein F K02455 gspF; general secretion pathway protein F D DM42_1721 gspG; type II secretion system protein G K02456 gspG; general secretion pathway protein G D DM42_1722 gspH; type II secretion system protein H K02457 gspH; general secretion pathway protein H D DM42_1723 gspI; type II secretion system protein I K02458 gspI; general secretion pathway protein I D DM42_1724 hypothetical protein K02459 gspJ; general secretion pathway protein J D DM42_1725 type II secretion system (T2SS), K family protein K02460 gspK; general secretion pathway protein K D DM42_1726 gspL; type II secretion system protein L K02461 gspL; general secretion pathway protein L D DM42_1727 type II secretion system (T2SS), M family protein K02462 gspM; general secretion pathway protein M D DM42_1718 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D DM42_1121 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D DM42_1122 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D DM42_1487 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D DM42_2811 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D DM42_1453 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D DM42_1120 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D DM42_1790 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D DM42_1271 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DM42_2260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DM42_2215 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D DM42_1249 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DM42_1385 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA D DM42_1384 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D DM42_1383 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D DM42_4822 transglycosylase SLT domain protein K03194 virB1; type IV secretion system protein VirB1 D DM42_5958 transglycosylase SLT domain protein K03194 virB1; type IV secretion system protein VirB1 D DM42_4821 trbC/VIRB2 family protein K03197 virB2; type IV secretion system protein VirB2 D DM42_4818 virB5; P-type DNA transfer protein VirB5 K03200 virB5; type IV secretion system protein VirB5 D DM42_4815 conjugal transfer family protein K03204 virB9; type IV secretion system protein VirB9 D DM42_4819 trbL/VirB6 plasmid conjugal transfer family protein K03201 virB6; type IV secretion system protein VirB6 D DM42_4816 virB8 family protein K03203 virB8; type IV secretion system protein VirB8 D DM42_4814 bacterial conjugation TrbI-like family protein K03195 virB10; type IV secretion system protein VirB10 D DM42_4820 ptlC; type IV secretion system protein ptlC K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D DM42_4813 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D DM42_4811 type IV secretory system Conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D DM42_2056 type IV secretory system Conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D DM42_4592 type IV secretory system Conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D DM42_5737 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_395 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_7346 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_845 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_5030 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_2884 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_347 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_350 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_5104 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_1364 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp D DM42_1368 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD D DM42_1356 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL D DM42_1370 type IV/VI secretion system , DotU family domain protein K11892 impK; type VI secretion system protein ImpK D DM42_1360 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:bced02020] D DM42_415 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DM42_416 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D DM42_4762 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DM42_4763 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DM42_6244 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D DM42_421 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D DM42_2675 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D DM42_3158 putative oxidative stress related two component system, sensor kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D DM42_7278 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D DM42_2674 hypothetical protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D DM42_3159 ompR; transcriptional regulatory protein ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D DM42_7279 hypothetical protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D DM42_2453 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_696 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_6251 PDZ domain protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_6006 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D DM42_6005 hypothetical protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D DM42_522 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D DM42_523 MMPL family protein K07788 mdtB; multidrug efflux pump D DM42_524 acrB/AcrD/AcrF family protein K07789 mdtC; multidrug efflux pump D DM42_3670 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_4373 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_7273 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_4713 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_3669 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_4374 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_7275 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_4712 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_4823 HAMP domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D DM42_4835 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D DM42_4824 hypothetical protein K07666 qseB; two-component system, OmpR family, response regulator QseB D DM42_1577 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD D DM42_1576 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D DM42_1587 hypothetical protein K02406 fliC; flagellin D DM42_1557 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA D DM42_4311 motA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D DM42_1575 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D DM42_2777 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D DM42_2778 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D DM42_2774 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D DM42_2775 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D DM42_2776 kdpC; K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D DM42_4475 his Kinase A domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D DM42_1747 his Kinase A domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D DM42_3704 HAMP domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D DM42_4474 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD D DM42_3705 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD D DM42_1748 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD D DM42_4558 tripartite tricarboxylate transporter TctA family protein K07793 tctA; putative tricarboxylic transport membrane protein D DM42_2231 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D DM42_3682 lsdA; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10] D DM42_1786 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DM42_6277 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D DM42_76 efflux transporter, RND family, MFP subunit K18094 mexX; membrane fusion protein, multidrug efflux system D DM42_75 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18095 mexY; multidrug efflux pump D DM42_6180 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DM42_4122 hpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D DM42_6394 hpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D DM42_5441 cimH; citrate/malate transporter K11616 maeN; malate:Na+ symporter D DM42_5164 bacterial regulatory s, luxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D DM42_7206 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D DM42_7205 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D DM42_7203 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D DM42_7204 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D DM42_6258 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D DM42_6257 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D DM42_5979 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D DM42_6252 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D DM42_6630 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D DM42_6171 bla; beta-lactamase Toho-1 K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D DM42_2643 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D DM42_2644 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D DM42_2642 hypothetical protein K07346 fimC; fimbrial chaperone protein D DM42_71 hypothetical protein K07346 fimC; fimbrial chaperone protein D DM42_2641 outer membrane usher family protein K07347 fimD; outer membrane usher protein D DM42_6255 hypothetical protein K07347 fimD; outer membrane usher protein D DM42_6793 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_6794 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_180 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_6795 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_6798 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D DM42_177 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D DM42_6799 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC D DM42_176 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC D DM42_6804 cobQ/CobB/MinD/ParA nucleotide binding domain protein K02282 cpaE; pilus assembly protein CpaE D DM42_174 response regulator K02282 cpaE; pilus assembly protein CpaE D DM42_6805 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D DM42_173 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D DM42_6806 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B D DM42_172 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B D DM42_6807 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C D DM42_171 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C D DM42_170 TPR repeat family protein K27079 tadD; tight adherence protein D D DM42_168 tad-like Flp pilus-assembly family protein K27080 tadG; tight adherence protein G D DM42_3077 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D DM42_2664 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D DM42_2939 sensory box protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D DM42_2940 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D DM42_5906 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2016 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2923 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2938 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_1889 HAMP domain protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D DM42_1890 bacterial regulatory , Fis family protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D DM42_686 bacterial regulatory , Fis family protein K07713 zraR; two-component system, NtrC family, response regulator HydG D DM42_3627 atoE; short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2197 his Kinase A domain protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D DM42_5440 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D DM42_5439 bacterial regulatory , Fis family protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D DM42_2198 AAA domain family protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D DM42_1197 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein D DM42_2196 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D DM42_6895 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein D DM42_7104 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D DM42_2279 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D DM42_2426 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D DM42_1569 cheR methyltransferase, all-alpha domain protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DM42_7319 sensory box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DM42_3663 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_2235 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_5614 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_255 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_4309 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_5980 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_3587 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_86 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_1570 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_5289 tar; methyl-accepting chemotaxis protein II K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_6146 methyl-accepting chemotaxis (MCP) signaling domain protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_6670 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_5409 sensory box protein K03776 aer; aerotaxis receptor D DM42_5411 aer; aerotaxis receptor K03776 aer; aerotaxis receptor D DM42_1571 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW D DM42_1572 cheW-like domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DM42_3896 HAMP domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DM42_1566 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_1573 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_3892 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_7318 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DM42_1567 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DM42_4263 cheR methyltransferase, SAM binding domain protein K13486 wspC; chemotaxis protein methyltransferase WspC D DM42_4265 methyl-accepting chemotaxis (MCP) signaling domain protein K13487 wspA; methyl-accepting chemotaxis protein WspA D DM42_4264 cheW-like domain protein K13488 wspB; chemotaxis-related protein WspB D DM42_4262 cheW-like domain protein K13489 wspD; chemotaxis-related protein WspD D DM42_4261 cheW-like domain protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D DM42_4260 cheB methylesterase family protein K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D DM42_3929 cheB methylesterase family protein K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D DM42_3930 diguanylate cyclase domain protein K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D DM42_6543 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D DM42_1170 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D DM42_1171 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein D DM42_1172 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein D DM42_1173 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D DM42_2914 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D DM42_2527 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DM42_7175 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DM42_4510 enoyl-CoA hydratase/isomerase family protein K13816 rpfF; DSF synthase D DM42_5818 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D DM42_1918 his Kinase A domain protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D DM42_1919 bacterial regulatory , Fis family protein K15012 regA; two-component system, response regulator RegA D DM42_1380 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D DM42_1379 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D DM42_1378 cytochrome C1 family protein K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D DM42_2605 nirM; cytochrome c-551 K08738 CYC; cytochrome c D DM42_1536 ph_c-552; cytochrome c K08738 CYC; cytochrome c D DM42_4879 cytochrome c family protein K08738 CYC; cytochrome c D DM42_5303 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DM42_2252 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DM42_7185 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DM42_5302 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DM42_2251 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DM42_7184 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DM42_3468 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D DM42_2250 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D DM42_3772 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_3786 type I secretion outer membrane , TolC family protein K12340 tolC; outer membrane protein D DM42_6085 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_4228 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D DM42_1065 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D DM42_3757 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D DM42_4229 ptp; low molecular weight protein-tyrosine-phosphatase ptp K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D DM42_2960 low molecular weight phosphotyrosine phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D DM42_4227 capsular exopolysaccharide family domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D DM42_3756 cobQ/CobB/MinD/ParA nucleotide binding domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D DM42_381 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D DM42_6081 autoinducer synthetase family protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D DM42_6083 sigma-70, region 4 family protein K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR D DM42_340 RNA polymerase sigma factor, sigma-70 family protein K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D DM42_339 fecR family protein K07165 fecR; transmembrane sensor D DM42_1982 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:bced04148] D DM42_3981 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D DM42_1380 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:bced02024] D DM42_3293 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D DM42_165 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D DM42_1309 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DM42_1310 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D DM42_6081 autoinducer synthetase family protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D DM42_5650 alpha/beta hydrolase fold family protein K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-] D DM42_5652 hypothetical protein K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D DM42_5654 rhamnosyltransferase family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D DM42_1099 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D DM42_5226 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D DM42_4823 HAMP domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D DM42_4835 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D DM42_4824 hypothetical protein K07666 qseB; two-component system, OmpR family, response regulator QseB D DM42_1577 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD D DM42_1576 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D DM42_2778 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D DM42_2052 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D DM42_4590 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D DM42_2051 trbC/VIRB2 family protein K20528 trbC; type IV secretion system protein TrbC D DM42_4589 trbC/VIRB2 family protein K20528 trbC; type IV secretion system protein TrbC D DM42_4588 type IV secretory pathway, VirB3-like family protein K20529 trbD; type IV secretion system protein TrbD D DM42_2050 type IV secretory pathway, VirB3-like family protein K20529 trbD; type IV secretion system protein TrbD D DM42_2049 cagE, TrbE, VirB , component of type IV transporter system family protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D DM42_4587 cagE, TrbE, VirB , component of type IV transporter system family protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D DM42_4586 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D DM42_2048 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D DM42_4584 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D DM42_2047 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D DM42_4583 virB8 family protein K20531 trbF; type IV secretion system protein TrbF D DM42_2046 virB8 family protein K20531 trbF; type IV secretion system protein TrbF D DM42_2045 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D DM42_4582 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D DM42_2044 bacterial conjugation TrbI-like family protein K20533 trbI; type IV secretion system protein TrbI D DM42_4581 bacterial conjugation TrbI-like family protein K20533 trbI; type IV secretion system protein TrbI D DM42_4133 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DM42_7 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DM42_487 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DM42_4424 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DM42_6286 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DM42_4131 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DM42_4 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DM42_488 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DM42_489 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DM42_4420 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DM42_4132 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D DM42_5 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D DM42_4419 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D DM42_4134 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D DM42_6 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D DM42_490 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D DM42_4418 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D DM42_557 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_2806 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4976 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_2591 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4480 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_5743 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_6614 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1695 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1668 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1691 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1550 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_3871 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_3777 amiC; aliphatic amidase expression-regulating protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4642 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_6534 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_3602 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_5468 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4479 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_2570 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_5744 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_6615 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_286 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_1694 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_1690 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_1689 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_5745 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_6616 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_285 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_1693 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_2571 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_4478 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_2572 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_5746 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_6617 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_284 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_1697 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_5747 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_6618 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_283 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_1696 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_2573 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_4477 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_1688 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_6083 sigma-70, region 4 family protein K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR D DM42_4942 bacterial regulatory s, luxR family protein K19731 cciR; LuxR family transcriptional regulator, quorum-sensing system regulator CciR D DM42_4968 bacterial regulatory s, luxR family protein K20540 cepR2; LuxR family transcriptional regulator, quorum-sensing system regulator CepR2 D DM42_4510 enoyl-CoA hydratase/isomerase family protein K13816 rpfF; DSF synthase D DM42_4511 gmr; cyclic di-GMP phosphodiesterase Gmr K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52] D DM42_6961 thermolysin metallopeptidase, catalytic domain protein K20273 zmpA; zinc metalloprotease ZmpA D DM42_5683 peptidase propeptide and YPEB domain protein K20274 zmpB; zinc metalloprotease ZmpB D DM42_6788 inclusion body family protein K20275 aidA; nematocidal protein AidA D DM42_6787 inclusion body family protein K20275 aidA; nematocidal protein AidA D DM42_5853 hypothetical protein K20276 bapA; large repetitive protein D DM42_4972 hypothetical protein K20277 bcl; mannose-binding lectin D DM42_4971 hypothetical protein K20277 bcl; mannose-binding lectin D DM42_4970 putative sugar-binding lectin protein K20277 bcl; mannose-binding lectin D DM42_1292 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_162 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_5880 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_7303 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_2510 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_2527 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DM42_7175 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DM42_2470 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D DM42_521 bacterial transcriptional regulator family protein K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis D DM42_6069 bacterial regulatory s, luxR family protein K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons D DM42_6077 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D DM42_881 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D DM42_5693 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D DM42_74 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system D DM42_7395 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_2462 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_7282 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4608 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4853 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4161 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_5873 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_5256 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DM42_5257 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein D DM42_5258 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein D DM42_5259 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein D DM42_5260 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein D DM42_6179 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DM42_6187 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DM42_7010 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DM42_6882 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DM42_6178 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D DM42_7011 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D DM42_6883 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D DM42_6177 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DM42_7012 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DM42_6884 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DM42_7013 nikE; nickel import ATP-binding protein NikE K02031 ddpD; peptide/nickel transport system ATP-binding protein D DM42_6885 nikE; nickel import ATP-binding protein NikE K02031 ddpD; peptide/nickel transport system ATP-binding protein D DM42_6176 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D DM42_6175 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D DM42_1790 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D DM42_6205 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-] D DM42_1487 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D DM42_2811 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D DM42_1453 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D DM42_1120 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D DM42_1271 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DM42_2260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DM42_2215 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D DM42_1249 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DM42_1809 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_556 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_3615 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_4744 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_5264 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_5553 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:bced02030] D DM42_3663 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_2235 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_5614 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_255 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_4309 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_5980 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_3587 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_86 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_1570 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_5289 tar; methyl-accepting chemotaxis protein II K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_6146 methyl-accepting chemotaxis (MCP) signaling domain protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_6670 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_5409 sensory box protein K03776 aer; aerotaxis receptor D DM42_5411 aer; aerotaxis receptor K03776 aer; aerotaxis receptor D DM42_155 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_5711 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_91 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_5983 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_3971 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein D DM42_1964 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein D DM42_2148 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein D DM42_1572 cheW-like domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DM42_3896 HAMP domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DM42_1571 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW D DM42_1566 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_1573 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_3892 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_5151 cheC-like family protein K03410 cheC; chemotaxis protein CheC D DM42_1565 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D DM42_7318 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DM42_1567 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DM42_7319 sensory box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DM42_1568 cheD chemotactic sensory transduction family protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DM42_1569 cheR methyltransferase, all-alpha domain protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DM42_1944 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D DM42_1738 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D DM42_1739 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D DM42_4311 motA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D DM42_1575 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D DM42_4310 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB D DM42_1574 motB; motility protein B K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:bced02040] D DM42_1946 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D DM42_1945 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D DM42_1944 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D DM42_1943 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH D DM42_1942 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DM42_1941 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D DM42_1940 flagellar hook-length control FliK family protein K02414 fliK; flagellar hook-length control protein FliK D DM42_1737 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D DM42_1738 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D DM42_1739 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D DM42_1740 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D DM42_1741 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D DM42_1742 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D DM42_1743 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D DM42_1560 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D DM42_1561 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D DM42_1983 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D DM42_1984 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D DM42_1985 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D DM42_1986 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D DM42_1987 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE D DM42_4099 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE D DM42_1988 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D DM42_1989 flgF; flagellar basal-body rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG D DM42_1990 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH D DM42_1991 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI D DM42_1992 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D DM42_1994 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D DM42_1995 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D DM42_1587 hypothetical protein K02406 fliC; flagellin D DM42_6578 flagellar hook-associated family protein K02407 fliD; flagellar hook-associated protein 2 D DM42_1588 flagellar hook-associated family protein K02407 fliD; flagellar hook-associated protein 2 D DM42_1947 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D DM42_1948 flagellar FliT family protein K02423 fliT; flagellar protein FliT D DM42_1589 flagellar FliT family protein K02423 fliT; flagellar protein FliT D DM42_4311 motA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D DM42_1575 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D DM42_4310 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB D DM42_1574 motB; motility protein B K02557 motB; chemotaxis protein MotB D DM42_1982 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D DM42_1981 flgN family protein K02399 flgN; flagellar biosynthesis protein FlgN D DM42_140 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_1818 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_1373 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_4695 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_4169 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D DM42_3834 RNA polymerase sigma factor, sigma-70 family protein K03086 rpoD; RNA polymerase primary sigma factor D DM42_5617 RNA polymerase sigma factor, sigma-70 family protein K03086 rpoD; RNA polymerase primary sigma factor D DM42_1577 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD D DM42_1576 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D DM42_7104 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D DM42_2279 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D DM42_1557 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D DM42_2981 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:bced04980] D DM42_1103 cob(I)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D DM42_2155 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DM42_2156 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:bced01501] D DM42_5679 gram-negative porin family protein K08720 ompU; outer membrane protein OmpU D DM42_1911 major Facilitator Superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D DM42_687 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D DM42_5828 bacterial regulatory helix-turn-helix , lysR family protein K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D DM42_6630 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D DM42_6171 bla; beta-lactamase Toho-1 K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D DM42_5256 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DM42_5257 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein D DM42_5258 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein D DM42_5259 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein D DM42_5260 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein D DM42_5829 blaCTX; beta-lactamase CTX-M-27 K17836 penP; beta-lactamase class A [EC:3.5.2.6] D DM42_77 putative transcriptional regulator K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor D DM42_76 efflux transporter, RND family, MFP subunit K18094 mexX; membrane fusion protein, multidrug efflux system D DM42_75 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18095 mexY; multidrug efflux pump D DM42_7397 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_2460 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_7280 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_2461 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump D DM42_7396 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump D DM42_7281 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump D DM42_74 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system D DM42_7395 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_2462 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_7282 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4608 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4853 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4161 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_5873 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_5052 HAMP domain protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D DM42_5884 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_5051 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_5872 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_4162 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_4159 efflux transporter, RND family, MFP subunit K18145 adeA; membrane fusion protein, multidrug efflux system D DM42_5875 efflux transporter, RND family, MFP subunit K18145 adeA; membrane fusion protein, multidrug efflux system D DM42_4160 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18146 adeB; multidrug efflux pump D DM42_5874 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18146 adeB; multidrug efflux pump D DM42_3772 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_3786 type I secretion outer membrane , TolC family protein K12340 tolC; outer membrane protein D DM42_6085 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_5342 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_3600 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_3149 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_1434 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_5525 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_1898 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D DM42_1286 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DM42_3725 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DM42_4759 penicillin binding transpeptidase domain protein K17838 oxa; beta-lactamase class D [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:bced01502] D DM42_6180 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DM42_1278 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DM42_3060 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DM42_3887 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DM42_1284 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D DM42_1283 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DM42_1280 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bced01503] D DM42_3240 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D DM42_3237 polysaccharide deacetylase family protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D DM42_5912 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DM42_2505 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DM42_2453 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_696 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_6251 PDZ domain protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_2150 dsbA; disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D DM42_3007 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D DM42_7397 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_2460 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_7280 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_2461 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump D DM42_7396 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump D DM42_7281 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump D DM42_3772 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_3786 type I secretion outer membrane , TolC family protein K12340 tolC; outer membrane protein D DM42_6085 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_3091 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D DM42_6277 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:bced01000] C 01001 Protein kinases [BR:bced01001] D DM42_6183 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DM42_6996 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DM42_4227 capsular exopolysaccharide family domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D DM42_3756 cobQ/CobB/MinD/ParA nucleotide binding domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D DM42_415 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DM42_6244 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D DM42_2675 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D DM42_3158 putative oxidative stress related two component system, sensor kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D DM42_7278 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D DM42_6006 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D DM42_3670 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_4373 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_7273 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_4713 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_4823 HAMP domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D DM42_4835 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D DM42_2777 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D DM42_4475 his Kinase A domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D DM42_1747 his Kinase A domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D DM42_3704 HAMP domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D DM42_5052 HAMP domain protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D DM42_5820 his Kinase A domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D DM42_360 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D DM42_2452 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D DM42_6258 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D DM42_5165 histidine kinase family protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D DM42_3555 histidine kinase family protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D DM42_2939 sensory box protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D DM42_1889 HAMP domain protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D DM42_2197 his Kinase A domain protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D DM42_5440 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D DM42_6759 his Kinase A domain protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DM42_1572 cheW-like domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DM42_3896 HAMP domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DM42_4261 cheW-like domain protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D DM42_6543 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D DM42_1918 his Kinase A domain protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:bced01009] D DM42_1556 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D DM42_2714 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG D DM42_3409 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:bced01002] D DM42_2554 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D DM42_596 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D DM42_1264 outO; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D DM42_6796 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D DM42_179 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D DM42_1709 peptidase C26 family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DM42_3109 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DM42_2017 peptidase C26 family protein K07010 K07010; putative glutamine amidotransferase D DM42_2922 peptidase C26 family protein K07010 K07010; putative glutamine amidotransferase D DM42_3769 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D DM42_4088 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D DM42_1419 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D DM42_388 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_2246 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_2027 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_3866 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_4672 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DM42_5956 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DM42_3422 asparagine synthase family protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DM42_4724 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase family protein K19200 IAL; isopenicillin-N N-acyltransferase like protein D DM42_5050 hchA; chaperone protein hchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D DM42_7093 intracellular protease, PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D DM42_2330 intracellular protease, PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D DM42_2413 thiJ/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D DM42_6242 CAAX protease self-immunity family protein K07052 K07052; CAAX protease family protein D DM42_1349 peptidase M1 family protein K01256 pepN; aminopeptidase N [EC:3.4.11.2] D DM42_814 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D DM42_2947 peptidase M3 family protein K01414 prlC; oligopeptidase A [EC:3.4.24.70] D DM42_6961 thermolysin metallopeptidase, catalytic domain protein K20273 zmpA; zinc metalloprotease ZmpA D DM42_5683 peptidase propeptide and YPEB domain protein K20274 zmpB; zinc metalloprotease ZmpB D DM42_6180 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DM42_1355 D-alanyl-D-alanine carboxypeptidase family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D DM42_2602 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D DM42_5665 membrane dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D DM42_3067 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D DM42_47 amidohydrolase family protein K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D DM42_5398 amidohydrolase family protein K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D DM42_6220 amidohydrolase family protein K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D DM42_573 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D DM42_3078 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D DM42_1980 metallopeptidase M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D DM42_1147 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D DM42_1329 metallopeptidase M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D DM42_5682 M42 glutamyl aminopeptidase family protein K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10] D DM42_4458 putative leucyl aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D DM42_4379 lysine-specific metallo-endopeptidase family protein K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20] D DM42_4849 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DM42_424 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DM42_6387 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DM42_750 peptidase M48 family protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D DM42_1886 peptidase M48 family protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D DM42_2316 peptidase M48 family protein K07387 K07387; metalloprotease [EC:3.4.24.-] D DM42_2430 peptidase M48 family protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D DM42_3086 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D DM42_3795 D-aminopeptidase family protein K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D DM42_3268 glucose-regulated metallo-peptidase M90 family protein K09933 mtfA; MtfA peptidase D DM42_3637 peptidase S58 family protein K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D DM42_3796 peptidase S58 family protein K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D DM42_2453 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_696 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_6251 PDZ domain protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_1382 peptidase Do family protein K04772 degQ; serine protease DegQ [EC:3.4.21.-] D DM42_6205 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-] D DM42_2941 hypothetical protein K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D DM42_2178 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DM42_6201 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D DM42_2955 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D DM42_2450 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D DM42_3175 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D DM42_5610 hydrolase CocE/NonD family protein K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11] D DM42_3177 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DM42_1960 AAA domain family protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DM42_97 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D DM42_693 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D DM42_5622 alpha/beta hydrolase fold family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5] D DM42_3851 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D DM42_769 PGAP1-like family protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D DM42_2211 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D DM42_1123 PDZ domain protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D DM42_711 clp protease family protein K04773 sppA; protease IV [EC:3.4.21.-] D DM42_4129 pcp; pseudomonalisin K05998 E3.4.21.100; pseudomonalisin [EC:3.4.21.100] D DM42_4164 pcp; pseudomonalisin K05998 E3.4.21.100; pseudomonalisin [EC:3.4.21.100] D DM42_5501 scpA; kumamolisin K08677 kscP; kumamolisin [EC:3.4.21.123] D DM42_3126 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D DM42_1921 hslV; ATP-dependent protease HslVU, peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D DM42_3801 iaaA; isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D DM42_7382 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_2398 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_6047 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_3779 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_2188 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D DM42_746 modulator of DNA gyrase family protein K03592 pmbA; PmbA protein D DM42_1098 modulator of DNA gyrase family protein K03568 tldD; TldD protein D DM42_2688 ecotin family protein K08276 eco; ecotin D DM42_6212 MG2 domain protein K06894 yfhM; alpha-2-macroglobulin D DM42_3296 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC D DM42_3295 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:bced01003] D DM42_2717 hypothetical protein K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D DM42_552 glycosyl transferase 2 family protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D DM42_2791 glycosyl transferases group 1 family protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D DM42_314 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D DM42_1228 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D DM42_6211 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D DM42_5342 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_3600 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_3149 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_1434 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_5525 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_5650 alpha/beta hydrolase fold family protein K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-] D DM42_5652 hypothetical protein K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D DM42_3682 lsdA; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10] D DM42_3864 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D DM42_4332 hypothetical protein K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173] D DM42_3424 glycosyltransferase, MGT family protein K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] D DM42_2682 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D DM42_564 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D DM42_6388 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:bced01005] D DM42_3091 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D DM42_3092 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D DM42_1273 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D DM42_1046 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D DM42_3089 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D DM42_3005 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D DM42_2523 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D DM42_1928 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D DM42_3877 aspartyl/Asparaginyl beta-hydroxylase family protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D DM42_932 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D DM42_2255 lipid A 3-O-deacylase family protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D DM42_2980 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D DM42_2521 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D DM42_2283 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D DM42_2284 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D DM42_775 rfaE; bifunctional protein RfaE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D DM42_2165 rfaE; bifunctional protein RfaE K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D DM42_934 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D DM42_851 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D DM42_2436 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D DM42_2752 glycosyltransferase 9 family protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D DM42_1538 SIS domain protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D DM42_2369 HAD hydrolase, family IIIA domain protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D DM42_7140 HAD hydrolase, IA, variant 1 family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D DM42_774 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D DM42_5654 rhamnosyltransferase family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D DM42_3963 glycosyl transferase 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D DM42_6790 glycosyl transferase 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bced01011] D DM42_1398 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DM42_3569 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DM42_2514 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DM42_1279 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D DM42_1282 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DM42_1285 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DM42_1278 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DM42_3060 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DM42_3887 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DM42_2870 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D DM42_3126 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D DM42_1283 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DM42_1280 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DM42_401 bacitracin resistance BacA family protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DM42_913 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DM42_5123 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D DM42_2518 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D DM42_5342 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_3600 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_3149 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_1434 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_5525 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DM42_6211 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D DM42_1898 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D DM42_1286 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DM42_3725 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DM42_2178 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DM42_2450 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D DM42_6201 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D DM42_2955 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D DM42_1228 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D DM42_6180 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DM42_1355 D-alanyl-D-alanine carboxypeptidase family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D DM42_1975 transglycosylase SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D DM42_1305 mltA specific insert domain protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D DM42_771 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D DM42_433 lysM domain protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D DM42_3207 yceG-like family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D DM42_1542 rlpA; rare lipoA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D DM42_5912 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DM42_2505 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DM42_145 amiD; N-acetylmuramoyl-L-alanine amidase AmiD K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DM42_1246 N-acetylmuramoyl-L-alanine amidase family protein K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:bced01004] D DM42_445 acyl transferase domain protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DM42_704 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DM42_4936 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DM42_705 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DM42_4935 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DM42_2304 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D DM42_6948 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DM42_701 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DM42_2656 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6640 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2313 3-beta hydroxysteroid dehydrogenase/isomerase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2769 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_4450 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6002 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2588 rmlD substrate binding domain protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_282 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_703 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_6333 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_2691 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_4522 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_5394 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DM42_3090 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DM42_6952 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DM42_5327 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D DM42_3181 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D DM42_2357 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D DM42_2560 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D DM42_404 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5799 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7365 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_5616 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_2875 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_7191 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DM42_1292 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_162 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_5880 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_7303 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_2510 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_5074 AMP-binding enzyme family protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D DM42_1673 AMP-binding enzyme family protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D DM42_706 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D DM42_2512 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DM42_2368 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DM42_961 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:bced01008] D DM42_61 mbtH-like family protein K05375 mbtH; MbtH protein D DM42_5762 AMP-binding enzyme family protein K12238 pchD; salicylate---[aryl-carrier protein] ligase [EC:6.2.1.61] D DM42_5764 amino acid adenylation domain protein K12239 pchE; L-cysteine---[L-cysteinyl-carrier protein] ligase PchE [EC:6.2.1.69] D DM42_5765 amino acid adenylation domain protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69] D DM42_5766 thiazolinyl imide reductase family protein K12241 pchG; pyochelin biosynthesis protein PchG D DM42_5761 rifR; rifR K12242 pchC; pyochelin biosynthesis protein PchC C 01006 Prenyltransferases [BR:bced01006] D DM42_4177 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D DM42_5933 uppS; di-trans,poly-cis-decaprenylcistransferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D DM42_1259 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D DM42_3083 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DM42_3690 squalene/phytoene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D DM42_5871 squalene/phytoene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D DM42_3163 hpnD; squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D DM42_1073 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DM42_1110 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D DM42_2232 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:bced01007] D DM42_3036 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DM42_295 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DM42_2743 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D DM42_1159 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DM42_2991 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DM42_7181 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DM42_3009 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DM42_2152 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DM42_2632 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DM42_6414 tRNA synthetases class I family protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DM42_2555 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DM42_259 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DM42_1189 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DM42_2970 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DM42_2347 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DM42_3289 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DM42_2371 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D DM42_2370 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D DM42_861 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DM42_1252 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DM42_225 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DM42_291 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DM42_221 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DM42_220 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DM42_3245 aminotransferase class-V family protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D DM42_3611 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_2856 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D DM42_2837 cys/Met metabolism PLP-dependent enzyme family protein K14287 ybdL; methionine transaminase [EC:2.6.1.88] D DM42_1660 beta-eliminating lyase family protein K14287 ybdL; methionine transaminase [EC:2.6.1.88] D DM42_3070 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D DM42_1395 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_2264 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DM42_5137 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D DM42_2139 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D DM42_1045 aminotransferase class I and II family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D DM42_3646 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D DM42_2576 argD; transaminase, acetylornithine/succinylornithine family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DM42_542 astC; succinylornithine transaminase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D DM42_5413 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D DM42_2015 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D DM42_6024 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D DM42_2924 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D DM42_2140 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D DM42_5757 dgdA; 2,2-dialkylglycine decarboxylase K00596 E4.1.1.64; 2,2-dialkylglycine decarboxylase (pyruvate) [EC:4.1.1.64] D DM42_5204 aminotransferase class-III family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DM42_880 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DM42_2179 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21] D DM42_2438 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DM42_1084 aminotransferase class IV family protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D DM42_1812 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D DM42_5475 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D DM42_3848 2-aminoethylphosphonate aminotransferase family protein K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D DM42_785 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:bced00199] D DM42_5902 FAD binding domain protein K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4] C 00194 Photosynthesis proteins [BR:bced00194] D DM42_4997 2Fe-2S iron-sulfur cluster binding domain protein K02639 petF; ferredoxin D DM42_1674 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D DM42_1675 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D DM42_1676 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D DM42_1677 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D DM42_1678 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D DM42_1679 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DM42_1680 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D DM42_1681 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DM42_1682 ATP synthase I chain family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:bced03000] D DM42_1641 helix-turn-helix domain protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D DM42_5685 helix-turn-helix domain protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D DM42_5763 helix-turn-helix domain protein K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D DM42_1040 cupin domain protein K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D DM42_6847 helix-turn-helix domain protein K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D DM42_1651 gyrI-like small molecule binding domain protein K13652 K13652; AraC family transcriptional regulator D DM42_1001 helix-turn-helix domain protein K07506 K07506; AraC family transcriptional regulator D DM42_5010 helix-turn-helix domain protein K07506 K07506; AraC family transcriptional regulator D DM42_5433 helix-turn-helix domain protein K07506 K07506; AraC family transcriptional regulator D DM42_7225 helix-turn-helix domain protein K07506 K07506; AraC family transcriptional regulator D DM42_7247 helix-turn-helix domain protein K07506 K07506; AraC family transcriptional regulator D DM42_1803 ada; bifunctional transcriptional activator/DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D DM42_4667 hypothetical protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D DM42_5845 helix-turn-helix domain protein K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D DM42_5684 helix-turn-helix domain protein K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D DM42_544 argR; transcriptional regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator D DM42_5663 helix-turn-helix domain protein K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D DM42_5578 helix-turn-helix domain protein K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D DM42_1324 gcvA; glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_1997 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_6172 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_7403 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_3137 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_5659 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_2181 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_6531 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_5727 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_6536 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_6716 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_6751 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_5176 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_4565 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_2111 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_2911 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_7195 gcvA; glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_7216 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_3872 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_3885 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_5583 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D DM42_3789 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D DM42_5494 bacterial regulatory helix-turn-helix , lysR family protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D DM42_461 bacterial regulatory helix-turn-helix , lysR family protein K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D DM42_1116 bacterial regulatory helix-turn-helix , lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D DM42_5308 argP; transcriptional regulator, ArgP family protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D DM42_5099 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D DM42_1199 cynR; HTH-type transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D DM42_4753 cynR; HTH-type transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D DM42_6439 bacterial regulatory helix-turn-helix , lysR family protein K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D DM42_2592 bacterial regulatory helix-turn-helix , lysR family protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D DM42_92 bacterial regulatory helix-turn-helix , lysR family protein K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D DM42_6865 bacterial regulatory helix-turn-helix , lysR family protein K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC D DM42_6065 lysR substrate binding domain protein K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D DM42_4792 bacterial regulatory helix-turn-helix , lysR family protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D DM42_5356 bacterial regulatory helix-turn-helix , lysR family protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D DM42_5401 bacterial regulatory helix-turn-helix , lysR family protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D DM42_6221 bacterial regulatory helix-turn-helix , lysR family protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D DM42_5130 dmlR; HTH-type transcriptional regulator DmlR K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D DM42_4345 bacterial regulatory helix-turn-helix , lysR family protein K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D DM42_7338 bacterial regulatory helix-turn-helix , lysR family protein K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway D DM42_5828 bacterial regulatory helix-turn-helix , lysR family protein K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D DM42_5420 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_7241 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_2415 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_4346 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_4407 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_6163 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_903 bacterial regulatory helix-turn-helix , lysR family protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D DM42_3859 bacterial regulatory helix-turn-helix , lysR family protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D DM42_6583 bacterial regulatory helix-turn-helix , lysR family protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D DM42_1175 bacterial regulatory helix-turn-helix , lysR family protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D DM42_3647 bacterial regulatory helix-turn-helix , lysR family protein K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D DM42_4729 bacterial regulatory helix-turn-helix , lysR family protein K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D DM42_5012 bacterial regulatory helix-turn-helix , lysR family protein K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D DM42_4336 benM; HTH-type transcriptional regulator BenM K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D DM42_4280 bacterial regulatory helix-turn-helix , lysR family protein K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D DM42_7286 deoR; deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D DM42_2397 deoR-like helix-turn-helix domain protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D DM42_5507 hypothetical protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D DM42_7030 hypothetical protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D DM42_4739 deoR-like helix-turn-helix domain protein K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D DM42_88 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DM42_6572 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DM42_2388 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DM42_4323 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DM42_6849 helix-turn-helix domain protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DM42_3681 bacterial regulatory s, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DM42_4665 helix-turn-helix family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DM42_3460 periplasmic binding s and sugar binding domain of LacI family protein K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D DM42_6818 periplasmic binding s and sugar binding domain of LacI family protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D DM42_6868 transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D DM42_4331 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D DM42_5216 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D DM42_6591 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D DM42_2916 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D DM42_2536 UTRA domain protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D DM42_2244 UTRA domain protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D DM42_4120 gntR-family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D DM42_3122 UTRA domain protein K03710 K03710; GntR family transcriptional regulator D DM42_1198 bacterial regulatory s, gntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DM42_2321 bacterial regulatory s, gntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DM42_5594 bacterial regulatory s, gntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DM42_5713 bacterial regulatory s, gntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DM42_4932 bacterial regulatory s, gntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DM42_6613 bacterial regulatory s, gntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DM42_558 bacterial regulatory s, gntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DM42_5172 bacterial regulatory s, gntR family protein K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D DM42_6285 bacterial regulatory s, gntR family protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D DM42_3686 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DM42_4135 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DM42_3907 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DM42_4166 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DM42_5414 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DM42_6250 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DM42_3707 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DM42_5526 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DM42_5005 bacterial regulatory s, gntR family protein K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D DM42_1074 tetR; tetracycline repressor protein class D K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D DM42_5649 betI; transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D DM42_2459 ttgR; HTH-type transcriptional regulator ttgR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D DM42_1914 bacterial regulatory s, tetR family protein K05501 slmA; TetR/AcrR family transcriptional regulator D DM42_7362 bacterial regulatory s, tetR family protein K09017 rutR; TetR/AcrR family transcriptional regulator D DM42_5870 bacterial regulatory s, tetR family protein K09017 rutR; TetR/AcrR family transcriptional regulator D DM42_6051 bacterial regulatory s, tetR family protein K09017 rutR; TetR/AcrR family transcriptional regulator D DM42_7410 bacterial regulatory s, tetR family protein K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D DM42_4333 bacterial regulatory s, tetR family protein K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D DM42_5325 bacterial regulatory s, tetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DM42_6557 bacterial regulatory s, tetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DM42_6875 bacterial regulatory s, tetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DM42_3552 bacterial regulatory s, tetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DM42_4574 bacterial regulatory s, tetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DM42_5379 regulatory protein TetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DM42_6556 bacterial regulatory s, tetR family protein K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D DM42_77 putative transcriptional regulator K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor D DM42_4151 bacterial regulatory s, tetR family protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D DM42_5892 bacterial regulatory s, tetR family protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D DM42_3659 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_4455 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_1507 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_2099 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_4595 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_762 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_6361 bacterial regulatory helix-turn-helix , lysR family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_6435 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_6458 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_2494 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_1701 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_5201 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_3613 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_1545 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_4671 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_5499 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_6400 asnC family protein K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D DM42_514 asnC-type helix-turn-helix domain protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D DM42_4783 asnC family protein K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon D DM42_6083 sigma-70, region 4 family protein K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR D DM42_4968 bacterial regulatory s, luxR family protein K20540 cepR2; LuxR family transcriptional regulator, quorum-sensing system regulator CepR2 D DM42_4942 bacterial regulatory s, luxR family protein K19731 cciR; LuxR family transcriptional regulator, quorum-sensing system regulator CciR D DM42_6069 bacterial regulatory s, luxR family protein K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons D DM42_14 bacterial regulatory s, luxR family protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D DM42_7421 marR family protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D DM42_3951 marR family protein K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D DM42_5546 marR family protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D DM42_4190 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D DM42_3500 marR family protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D DM42_4356 marR family protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D DM42_603 merR; Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D DM42_2850 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D DM42_6833 merR regulatory family protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D DM42_6054 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D DM42_4599 cueR; Cu(I)-responsive transcriptional regulator K19592 golS; MerR family transcriptional regulator, gold-responsive activator of gol and ges genes D DM42_6917 merR regulatory family protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D DM42_3270 merR regulatory family protein K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon D DM42_1194 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D DM42_2470 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D DM42_3914 bacterial transcriptional regulator family protein K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D DM42_3572 bacterial transcriptional regulator family protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D DM42_5404 beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D DM42_3622 bacterial transcriptional regulator family protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D DM42_5023 kdgR; transcriptional regulator kdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DM42_2956 bacterial transcriptional regulator family protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DM42_521 bacterial transcriptional regulator family protein K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis D DM42_2527 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DM42_7175 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DM42_4876 bacterial regulatory s, crp family protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D DM42_3606 cyclic nucleotide-binding domain protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D DM42_5098 bacterial regulatory s, crp family protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D DM42_2961 iscR; iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D DM42_3252 Rrf2 family protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D DM42_4950 bacterial regulatory , arsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D DM42_4605 bacterial regulatory , arsR family protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D DM42_2085 helix-turn-helix family protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D DM42_1183 SIS domain protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D DM42_2168 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D DM42_1150 bacterial regulatory , Fis family protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D DM42_5281 prpR; propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D DM42_6182 helix-turn-helix family protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D DM42_7222 archaeal transcriptional regulator TrmB family protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D DM42_5784 bacterial regulatory , Fis family protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DM42_5623 bacterial regulatory , Fis family protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DM42_3258 bacterial regulatory , Fis family protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DM42_7070 bacterial regulatory , Fis family protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DM42_4198 molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein D DM42_4738 bacterial regulatory helix-turn-helix , lysR family protein K02019 modE; molybdate transport system regulatory protein D DM42_7416 molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein D DM42_983 sensory box protein K21829 dauR; D-arginine utilization repressor D DM42_2025 helix-turn-helix family protein K07726 K07726; putative transcriptional regulator D DM42_3447 helix-turn-helix family protein K07727 K07727; putative transcriptional regulator D DM42_1669 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D DM42_665 frmR; transcriptional repressor frmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D DM42_3189 bolA-like family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D DM42_7406 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_5143 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_1684 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_2090 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_4625 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_3985 glycerol-3-phosphate responsive antiterminator family protein K02443 glpP; glycerol uptake operon antiterminator D DM42_1092 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D DM42_6074 hypothetical protein K06140 rnk; regulator of nucleoside diphosphate kinase D DM42_964 phosphoribosyl transferase domain protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DM42_583 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein D DM42_6470 putative FMN-binding domain protein K07734 paiB; transcriptional regulator D DM42_5527 putative FMN-binding domain protein K07734 paiB; transcriptional regulator D DM42_965 hypothetical protein K07735 algH; putative transcriptional regulator D DM42_1922 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D DM42_3736 prokaryotic dksA/traR C4-type zinc finger family protein K06204 dksA; RNA polymerase-binding transcription factor D DM42_1022 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D DM42_4359 sigma-54 interaction domain protein K14414 rtcR; transcriptional regulatory protein RtcR D DM42_1289 mraZ family protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:bced03021] D DM42_3573 DEAD_2 family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D DM42_1447 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DM42_1481 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DM42_1480 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DM42_836 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D DM42_4169 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D DM42_3834 RNA polymerase sigma factor, sigma-70 family protein K03086 rpoD; RNA polymerase primary sigma factor D DM42_5617 RNA polymerase sigma factor, sigma-70 family protein K03086 rpoD; RNA polymerase primary sigma factor D DM42_3280 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D DM42_6915 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DM42_699 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DM42_1759 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DM42_1765 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DM42_2796 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DM42_5147 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DM42_5234 RNA polymerase sigma-70 factor, family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DM42_975 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DM42_6297 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DM42_3225 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D DM42_340 RNA polymerase sigma factor, sigma-70 family protein K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D DM42_2254 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D DM42_7104 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D DM42_2279 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D DM42_1557 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA D DM42_200 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D DM42_886 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D DM42_1486 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D DM42_1377 hypothetical protein K03599 sspA; stringent starvation protein A D DM42_1376 stringent starvation B family protein K03600 sspB; stringent starvation protein B D DM42_698 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA D DM42_697 mucB/RseB family protein K03598 rseB; sigma-E factor negative regulatory protein RseB D DM42_1922 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D DM42_3736 prokaryotic dksA/traR C4-type zinc finger family protein K06204 dksA; RNA polymerase-binding transcription factor D DM42_428 greA; transcription elongation factor GreA domain protein K03624 greA; transcription elongation factor GreA D DM42_831 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D DM42_3271 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:bced03019] D DM42_715 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12] D DM42_2760 ribonuclease, Rne/Rng family domain protein K08301 rng; ribonuclease G [EC:3.1.26.-] D DM42_692 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DM42_147 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DM42_1210 ribonuclease family protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D DM42_749 exonuclease family protein K13288 orn; oligoribonuclease [EC:3.1.-.-] D DM42_2400 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DM42_5174 DEAD/DEAH box helicase family protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DM42_2742 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DM42_1479 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DM42_2981 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DM42_2808 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DM42_3271 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D DM42_1086 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DM42_969 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_4839 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_7324 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_4542 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_3293 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D DM42_165 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D DM42_414 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D DM42_3765 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D DM42_1080 pcnB; poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D DM42_1253 NUDIX domain protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D DM42_2275 P-loop ATPase family protein K06958 rapZ; RNase adapter protein RapZ D DM42_2932 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:bced03011] D DM42_780 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D DM42_3079 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D DM42_1467 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D DM42_1448 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D DM42_1456 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D DM42_3227 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DM42_1477 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D DM42_1459 ribosomal S8 family protein K02994 RP-S8; small subunit ribosomal protein S8 D DM42_1162 ribosomal S9/S16 family protein K02996 RP-S9; small subunit ribosomal protein S9 D DM42_1474 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D DM42_1449 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D DM42_1478 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D DM42_1450 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D DM42_1460 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14 D DM42_2807 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D DM42_758 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DM42_1464 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D DM42_3229 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DM42_1469 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D DM42_2517 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D DM42_4172 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DM42_6740 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DM42_1586 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DM42_1484 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D DM42_1470 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D DM42_1473 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D DM42_1472 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D DM42_1461 ribosomal L5 family protein K02931 RP-L5; large subunit ribosomal protein L5 D DM42_1458 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D DM42_3230 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D DM42_1483 ribosomal L10 family protein K02864 RP-L10; large subunit ribosomal protein L10 D DM42_1485 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D DM42_1482 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DM42_1163 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D DM42_1463 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D DM42_1454 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D DM42_1466 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D DM42_1446 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D DM42_1457 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D DM42_755 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D DM42_222 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D DM42_1258 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DM42_1468 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DM42_1471 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D DM42_1462 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D DM42_1257 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D DM42_2565 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D DM42_1465 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D DM42_1455 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D DM42_3267 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D DM42_707 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D DM42_2564 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DM42_1787 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D DM42_223 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D DM42_1451 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D DM42_2266 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D DM42_1770 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_2849 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_5487 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_1493 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_7370 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_1294 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_1768 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_5483 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_2845 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_7374 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_1497 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_1298 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_1769 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_5486 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_2848 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_7371 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_1295 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_1494 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:bced03009] D DM42_692 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DM42_749 exonuclease family protein K13288 orn; oligoribonuclease [EC:3.1.-.-] D DM42_691 era; GTP-binding protein Era K03595 era; GTPase D DM42_1256 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D DM42_1922 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D DM42_3736 prokaryotic dksA/traR C4-type zinc finger family protein K06204 dksA; RNA polymerase-binding transcription factor D DM42_200 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D DM42_886 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D DM42_1486 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D DM42_2580 pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D DM42_2364 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D DM42_2558 ubiE/COQ5 methyltransferase family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D DM42_1887 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D DM42_2261 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D DM42_1208 RNA methyltransferase, RsmE family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D DM42_1686 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D DM42_1288 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D DM42_710 tetrapyrrole (Corrin/Porphyrin) Methylases family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D DM42_1540 tetrapyrrole (Corrin/Porphyrin) Methylases family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D DM42_146 RNA 2'-O ribose methyltransferase substrate binding family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D DM42_425 ftsJ-like methyltransferase family protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D DM42_2762 rlmH; rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D DM42_1924 met-10+ like-family protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D DM42_2853 ribosomal RNA small subunit methyltransferase D, RsmJ family protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D DM42_1133 THUMP domain protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D DM42_3286 rlmN; 23S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D DM42_3283 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D DM42_202 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D DM42_714 pseudouridine synthase, RluA family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D DM42_3309 pseudouridine synthase, RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DM42_2542 pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D DM42_3076 pseudouridine synthase family protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D DM42_3055 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D DM42_757 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D DM42_3405 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D DM42_1238 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D DM42_3066 prmB; (glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D DM42_2996 cupin superfamily protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D DM42_715 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12] D DM42_2760 ribonuclease, Rne/Rng family domain protein K08301 rng; ribonuclease G [EC:3.1.26.-] D DM42_4984 hypothetical protein K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D DM42_751 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D DM42_3292 engA; ribosome-associated GTPase EngA K03977 engA; GTPase D DM42_3294 hflX; GTP-binding protein HflX K03665 hflX; GTPase D DM42_2447 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D DM42_835 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DM42_7377 mesh1; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DM42_198 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D DM42_201 hypothetical protein K09748 rimP; ribosome maturation factor RimP D DM42_735 S4 domain protein K14761 rlbA; ribosome-associated protein D DM42_2763 oligomerization domain protein K09710 ybeB; ribosome-associated protein D DM42_2377 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor D DM42_426 CRS1 / YhbY domain protein K07574 yhbY; RNA-binding protein D DM42_747 hypothetical protein K09889 yjgA; ribosome-associated protein D DM42_2278 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D DM42_1319 50S ribosome-binding GTPase family protein K06942 ychF; ribosome-binding ATPase D DM42_708 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:bced03016] D DM42_5815 ribonuclease T2 family protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D DM42_1210 ribonuclease family protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D DM42_1978 poly A polymerase head domain protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D DM42_4362 tRNA-splicing ligase RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D DM42_3036 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DM42_1252 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DM42_2555 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DM42_1189 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DM42_2632 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DM42_6414 tRNA synthetases class I family protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DM42_295 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DM42_2152 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DM42_2970 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DM42_2347 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DM42_291 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DM42_225 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DM42_861 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DM42_3009 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DM42_259 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DM42_3289 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DM42_221 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DM42_220 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DM42_1159 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DM42_2991 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DM42_7181 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DM42_1158 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D DM42_2784 threonyl and Alanyl tRNA synthetase second additional domain protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D DM42_1386 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DM42_5335 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DM42_912 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D DM42_4097 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D DM42_197 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D DM42_4355 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_4698 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_2962 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_2447 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D DM42_1073 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DM42_1792 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D DM42_1687 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DM42_5416 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D DM42_1788 ribonuclease P family protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D DM42_839 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D DM42_1230 RNB domain protein K01147 rnb; exoribonuclease II [EC:3.1.13.1] D DM42_1416 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D DM42_3111 ligT like Phosphoesterase family protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D DM42_1326 ccmA; heme ABC exporter, ATP-binding protein CcmA K06020 ettA; energy-dependent translational throttle protein EttA D DM42_2371 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D DM42_2370 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D DM42_2743 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D DM42_3471 aminoacyl-tRNA editing domain protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D DM42_6371 aminoacyl-tRNA editing domain protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D DM42_3125 cytidine and deoxycytidylate deaminase zinc-binding region family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D DM42_124 dusA; tRNA dihydrouridine synthase A family protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D DM42_1149 TIM-barrel , nifR3 family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D DM42_2379 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D DM42_4207 methyltransferase domain protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D DM42_3003 RNA methyltransferase, TrmH , group 1 family protein K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D DM42_756 trmD; tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D DM42_2218 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D DM42_3094 spoU rRNA Methylase family protein K03437 spoU; RNA methyltransferase, TrmH family D DM42_1144 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DM42_2029 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D DM42_266 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D DM42_2964 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D DM42_3206 aminomethyltransferase folate-binding domain protein K06980 ygfZ; tRNA-modifying protein YgfZ D DM42_1713 mnmC; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D DM42_1118 queA; tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D DM42_1892 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D DM42_1894 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D DM42_5451 6-pyruvoyl tetrahydropterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D DM42_1893 4Fe-4S single cluster domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D DM42_2335 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D DM42_2507 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D DM42_105 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D DM42_1119 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D DM42_3012 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D DM42_3054 yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D DM42_4174 tRNA threonylcarbamoyl adenosine modification protein YgjD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D DM42_2506 tRNA threonylcarbamoyl adenosine modification protein YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D DM42_2501 thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D DM42_147 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DM42_2808 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DM42_3897 PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D DM42_1637 PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:bced03012] D DM42_199 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D DM42_224 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D DM42_3063 ABC transporter family protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D DM42_3080 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D DM42_1475 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D DM42_1489 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D DM42_2540 fusA; translation elongation factor G K02355 fusA; elongation factor G D DM42_1476 fusA; translation elongation factor G K02355 fusA; elongation factor G D DM42_4064 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D DM42_1333 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D DM42_3082 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D DM42_1334 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D DM42_2265 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D DM42_1452 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D DM42_6340 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D DM42_685 efp; translation elongation factor P K02356 efp; elongation factor P D DM42_2971 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D DM42_504 RF-1 domain protein K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:bced03110] D DM42_2549 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D DM42_3253 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D DM42_7163 istB-like ATP binding family protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D DM42_3176 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D DM42_1920 hslU; ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D DM42_2714 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG D DM42_1086 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DM42_2966 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D DM42_1340 hsp70 family protein K04046 yegD; hypothetical chaperone protein D DM42_969 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_4839 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_7324 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_4542 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_1085 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D DM42_2965 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D DM42_2984 hsp33 family protein K04083 hslO; molecular chaperone Hsp33 D DM42_1088 grpE family protein K03687 GRPE; molecular chaperone GrpE D DM42_457 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D DM42_4886 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D DM42_4838 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D DM42_458 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D DM42_1089 S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D DM42_970 chaperonin 10 Kd subunit K04078 groES; chaperonin GroES D DM42_7325 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D DM42_4541 chaperonin 10 Kd subunit K04078 groES; chaperonin GroES D DM42_2453 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_696 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_6251 PDZ domain protein K04771 degP; serine protease Do [EC:3.4.21.107] D DM42_4849 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DM42_424 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DM42_6387 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DM42_1681 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DM42_2642 hypothetical protein K07346 fimC; fimbrial chaperone protein D DM42_71 hypothetical protein K07346 fimC; fimbrial chaperone protein D DM42_2215 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D DM42_2673 LTXXQ motif family protein K06006 cpxP; periplasmic protein CpxP/Spy D DM42_567 hypothetical protein K09796 pccA; periplasmic copper chaperone A D DM42_5779 hypothetical protein K09796 pccA; periplasmic copper chaperone A D DM42_6205 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-] D DM42_2249 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D DM42_3007 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D DM42_3006 cyp18; peptidyl-prolyl cis-trans isomerase cyp18 K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D DM42_3180 PPIC-type PPIASE domain protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D DM42_4217 FKBP-type peptidyl-prolyl cis-trans isomerase family protein K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D DM42_2567 FKBP-type peptidyl-prolyl cis-trans isomerase family protein K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D DM42_2998 FKBP-type peptidyl-prolyl cis-trans isomerase family protein K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D DM42_3188 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D DM42_7202 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D DM42_5066 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D DM42_2362 PPIC-type PPIASE domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D DM42_3272 trxA; thioredoxin K03671 TXN; thioredoxin D DM42_4775 thioredoxin family protein K03671 TXN; thioredoxin D DM42_2502 trxA; thioredoxin K05838 ybbN; putative thioredoxin D DM42_2214 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D DM42_1335 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D DM42_2150 dsbA; disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D DM42_808 disulfide bond formation DsbB family protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D DM42_1317 DSBA-like thioredoxin domain protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D DM42_1444 cytochrome C biogenesis transmembrane region family protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] C 04131 Membrane trafficking [BR:bced04131] D DM42_3285 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DM42_812 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D DM42_1204 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DM42_2212 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DM42_2442 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DM42_2714 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:bced03051] D DM42_2714 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:bced03032] D DM42_436 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DM42_1714 bacterial DNA-binding family protein K03530 hupB; DNA-binding protein HU-beta D DM42_219 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D DM42_779 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D DM42_1786 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DM42_3231 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D DM42_4170 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D DM42_2293 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_591 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_2745 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DM42_1785 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DM42_2603 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D DM42_1187 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DM42_3209 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DM42_437 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_3110 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_827 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_3273 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DM42_3093 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D DM42_4183 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DM42_3074 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DM42_1078 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D DM42_787 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DM42_1784 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DM42_2702 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D DM42_2701 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D DM42_6719 eukaryotic DNA topoisomerase I, catalytic core family protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D DM42_592 topB; DNA topoisomerase III family protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D DM42_1880 topB; DNA topoisomerase III family protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:bced03036] D DM42_692 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DM42_6679 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_5273 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_4944 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_6594 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_1547 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_1579 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_6424 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_1714 bacterial DNA-binding family protein K03530 hupB; DNA-binding protein HU-beta D DM42_219 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D DM42_779 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D DM42_1786 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DM42_1111 ferritin-like domain protein K04047 dps; starvation-inducible DNA-binding protein D DM42_1150 bacterial regulatory , Fis family protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D DM42_3293 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D DM42_165 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D DM42_5308 argP; transcriptional regulator, ArgP family protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D DM42_5099 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D DM42_3659 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_4455 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_1507 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_2099 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_4595 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_762 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_6361 bacterial regulatory helix-turn-helix , lysR family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_6435 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_6458 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_2494 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_1701 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_5201 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_3613 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_1545 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_4671 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_5499 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DM42_3072 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D DM42_2628 scpA/B family protein K05896 scpA; segregation and condensation protein A D DM42_203 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B D DM42_1276 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D DM42_2982 septum formation initiator family protein K05589 ftsB; cell division protein FtsB D DM42_1286 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DM42_3725 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DM42_1780 ftsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D DM42_865 ftsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D DM42_2737 ftsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D DM42_1287 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D DM42_1277 cell division FtsQ family protein K03589 ftsQ; cell division protein FtsQ D DM42_1281 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D DM42_1275 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DM42_2611 cell division ZapA family protein K09888 zapA; cell division protein ZapA D DM42_1266 hypothetical protein K18778 zapD; cell division protein ZapD D DM42_186 AFG1-like ATPase family protein K06916 zapE; cell division protein ZapE D DM42_5912 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DM42_2505 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DM42_7397 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_2460 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_7280 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_857 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D DM42_856 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D DM42_855 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D DM42_1914 bacterial regulatory s, tetR family protein K05501 slmA; TetR/AcrR family transcriptional regulator D DM42_5823 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins D DM42_1901 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins D DM42_1900 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D DM42_1899 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D DM42_1897 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D DM42_7407 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_2296 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_2625 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_5144 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_1685 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_2080 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_4617 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_7406 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_5143 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_1684 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_2090 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_4625 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_2702 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D DM42_2701 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D DM42_1687 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DM42_1686 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D DM42_1925 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D DM42_2509 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D DM42_7387 phage integrase family protein K04763 xerD; integrase/recombinase XerD D DM42_2634 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D DM42_1442 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:bced03400] D DM42_2508 methylated-DNA-[]-cysteine S-methyltransferase family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D DM42_4668 methylated-DNA-[]-cysteine S-methyltransferase family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D DM42_6920 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D DM42_2908 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D DM42_1314 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D DM42_2295 DNA-3-methyladenine glycosylase family protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D DM42_2273 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D DM42_2731 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D DM42_3573 DEAD_2 family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D DM42_1268 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DM42_4827 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DM42_33 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DM42_3993 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DM42_5609 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DM42_3113 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DM42_7040 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DM42_2552 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D DM42_1803 ada; bifunctional transcriptional activator/DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D DM42_6916 FAD binding domain of DNA photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D DM42_2294 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D DM42_7117 uracil-DNA glycosylase, 4 family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D DM42_3056 uracil-DNA glycosylase, 4 family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D DM42_1804 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D DM42_3010 hhH-GPD superbase excision DNA repair family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D DM42_4667 hypothetical protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D DM42_1583 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D DM42_2272 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D DM42_1906 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D DM42_2942 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D DM42_2972 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DM42_3074 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DM42_4183 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D DM42_2291 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D DM42_6734 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D DM42_657 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D DM42_670 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D DM42_2857 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D DM42_683 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D DM42_258 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DM42_624 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DM42_1481 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DM42_1480 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DM42_1447 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DM42_836 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D DM42_3153 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D DM42_2999 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DM42_1072 mutL; DNA mismatch repair MutL family protein K03572 mutL; DNA mismatch repair protein MutL D DM42_2524 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DM42_4178 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DM42_2745 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DM42_1785 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DM42_2603 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D DM42_1187 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DM42_3209 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DM42_437 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_3110 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_827 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DM42_3273 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DM42_2293 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_591 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_506 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D DM42_507 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D DM42_505 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DM42_2420 recA; protein RecA K03553 recA; recombination protein RecA D DM42_1153 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D DM42_1154 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D DM42_1152 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D DM42_1670 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D DM42_3228 putative primosomal replication protein n K02686 priB; primosomal replication protein N D DM42_3061 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D DM42_1117 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D DM42_690 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D DM42_3275 recR; recombination protein RecR K06187 recR; recombination protein RecR D DM42_1094 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D DM42_3528 exonuclease, RdgC family protein K03554 rdgC; recombination associated protein RdgC D DM42_7099 Ku protein K10979 ku; DNA end-binding protein Ku D DM42_7098 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D DM42_787 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DM42_1784 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DM42_6719 eukaryotic DNA topoisomerase I, catalytic core family protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D DM42_1714 bacterial DNA-binding family protein K03530 hupB; DNA-binding protein HU-beta D DM42_1150 bacterial regulatory , Fis family protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D DM42_219 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D DM42_779 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D DM42_1479 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D DM42_6679 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_5273 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_4944 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_6594 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_1547 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_1579 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_6424 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D DM42_2946 hypothetical protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D DM42_97 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D DM42_5033 DNA polymerase family B, exonuclease domain protein K02336 polB; DNA polymerase II [EC:2.7.7.7] D DM42_2241 putative cell division inhibitor protein K14160 imuA; protein ImuA D DM42_2242 impB/mucB/samB family protein K14161 imuB; protein ImuB D DM42_2243 dnaE; DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D DM42_2421 recX family protein K03565 recX; regulatory protein D DM42_3735 PHP domain protein K02347 polX; DNA polymerase (family X) D DM42_1628 hypothetical protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D DM42_3307 DEAD_2 family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D DM42_3781 DEAD/H associated family protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D DM42_1245 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DM42_4848 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DM42_1244 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:bced03029] D DM42_1379 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D DM42_199 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D DM42_224 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D DM42_3080 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D DM42_1475 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D DM42_1489 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D DM42_2540 fusA; translation elongation factor G K02355 fusA; elongation factor G D DM42_1476 fusA; translation elongation factor G K02355 fusA; elongation factor G D DM42_691 era; GTP-binding protein Era K03595 era; GTPase D DM42_1159 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DM42_1189 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DM42_2347 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DM42_2152 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DM42_5730 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DM42_4925 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DM42_1903 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DM42_807 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DM42_1904 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D DM42_1902 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D DM42_2293 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_591 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D DM42_3087 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D DM42_1086 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DM42_1088 grpE family protein K03687 GRPE; molecular chaperone GrpE D DM42_969 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_4839 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_7324 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_4542 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_970 chaperonin 10 Kd subunit K04078 groES; chaperonin GroES D DM42_7325 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D DM42_4541 chaperonin 10 Kd subunit K04078 groES; chaperonin GroES D DM42_1085 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D DM42_5309 ethe1; ETHE1, mitochondrial domain protein K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D DM42_4355 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_4698 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_2962 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_2965 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D DM42_1335 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D DM42_2634 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D DM42_2232 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D DM42_2225 cytochrome c oxidase assembly CtaG/Cox11 family protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D DM42_2231 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D DM42_1790 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D DM42_2229 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D DM42_566 redoxin family protein K07152 SCO1; protein SCO1 D DM42_2233 redoxin family protein K07152 SCO1; protein SCO1 D DM42_2714 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:bced02000] D DM42_2746 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D DM42_3769 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D DM42_2358 ABC transporter family protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D DM42_6554 ABC transporter family protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D DM42_563 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D DM42_4255 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D DM42_5768 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D DM42_7143 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D DM42_4797 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D DM42_5767 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D DM42_5855 type I secretion system ATPase family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D DM42_3785 type I secretion system ATPase family protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D DM42_3884 msbA; lipid A export permease/ATP-binding protein MsbA K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD D DM42_5807 macB; macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D DM42_55 cyclic peptide transporter family protein K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D DM42_1412 ABC transporter family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D DM42_2700 ccmA; heme ABC exporter, ATP-binding protein CcmA K15738 uup; ABC transport system ATP-binding/permease protein D DM42_2118 sbp; sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D DM42_96 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D DM42_95 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D DM42_94 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D DM42_93 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D DM42_7332 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein D DM42_4195 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D DM42_6894 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein D DM42_4196 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D DM42_4197 ABC transporter family protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D DM42_2185 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein D DM42_2187 binding--dependent transport system inner membrane component family protein K15552 tauC; taurine transport system permease protein D DM42_2186 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D DM42_150 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_7400 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_6974 bacterial extracellular solute-binding s, 3 family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3965 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3973 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_6837 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_4535 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3702 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3961 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3520 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_1744 bacterial extracellular solute-binding s, 3 family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_4473 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3698 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_6983 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3119 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein D DM42_3699 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_129 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_3966 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_3967 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_6836 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_4536 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_4538 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_6981 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_1746 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_3118 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein D DM42_128 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_3968 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_6835 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_6982 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_3700 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_1745 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_3117 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D DM42_1815 putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D DM42_511 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein D DM42_3708 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein D DM42_1813 putative 2-aminoethylphosphonate ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D DM42_512 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein D DM42_3709 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein D DM42_1814 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D DM42_513 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D DM42_3710 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D DM42_2014 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein D DM42_3437 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein D DM42_6597 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein D DM42_4726 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein D DM42_2011 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein D DM42_3440 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein D DM42_2012 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein D DM42_3439 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein D DM42_2013 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D DM42_3438 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D DM42_4133 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DM42_7 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DM42_487 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DM42_4424 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DM42_6286 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DM42_4131 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DM42_4 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DM42_488 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DM42_489 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DM42_4420 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DM42_4132 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D DM42_5 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D DM42_4419 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D DM42_4134 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D DM42_6 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D DM42_490 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D DM42_4418 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D DM42_5476 phnS; 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein D DM42_5479 phnV; 2-aminoethylphosphonate ABC transport system, membrane component PhnV K11082 phnV; 2-aminoethylphosphonate transport system permease protein D DM42_5478 phnU; 2-aminoethylphosphonate ABC transporter, permease protein K11083 phnU; 2-aminoethylphosphonate transport system permease protein D DM42_5477 phnT; 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein D DM42_5696 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DM42_5673 substrate binding domain of ABC-type glycine betaine transport system family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DM42_5678 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DM42_5579 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DM42_4741 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DM42_5577 choW; choline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein D DM42_5576 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D DM42_6603 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein D DM42_5607 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein D DM42_6602 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein D DM42_6604 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein D DM42_5604 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein D DM42_5606 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein D DM42_6601 proV; glycine betaine/L-proline transport ATP binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D DM42_5605 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D DM42_6763 bacterial extracellular solute-binding s, 3 family protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D DM42_6843 NMT1-like family protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D DM42_4897 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D DM42_6769 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D DM42_6842 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D DM42_2677 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D DM42_6044 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D DM42_4896 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D DM42_6770 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D DM42_6844 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D DM42_2678 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D DM42_6045 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D DM42_2478 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_5182 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_6819 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_870 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_5057 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_873 putative sugar-binding periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D DM42_872 binding--dependent transport system inner membrane component family protein K17316 gtsB; glucose/mannose transport system permease protein D DM42_871 binding--dependent transport system inner membrane component family protein K17317 gtsC; glucose/mannose transport system permease protein D DM42_5190 periplasmic binding s and sugar binding domain of LacI family protein K10537 araF; L-arabinose transport system substrate-binding protein D DM42_1221 periplasmic binding s and sugar binding domain of LacI family protein K10537 araF; L-arabinose transport system substrate-binding protein D DM42_5192 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein D DM42_1219 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein D DM42_5191 ccmA; heme ABC exporter, ATP-binding protein CcmA K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D DM42_1220 araG; arabinose import ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D DM42_6851 xylF; 2-hydroxymuconic semialdehyde hydrolase K10543 xylF; D-xylose transport system substrate-binding protein D DM42_6853 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein D DM42_6852 xylG; D-xylose ABC transporter, ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D DM42_155 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_5711 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_91 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_5983 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein D DM42_154 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein D DM42_5710 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein D DM42_89 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein D DM42_5985 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein D DM42_90 ccmA; heme ABC exporter, ATP-binding protein CcmA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D DM42_153 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D DM42_5709 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D DM42_5984 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D DM42_6723 periplasmic binding s and sugar binding domain of LacI family protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D DM42_4321 periplasmic binding s and sugar binding domain of LacI family protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D DM42_6726 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein D DM42_4319 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein D DM42_4318 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein D DM42_6725 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein D DM42_4320 ABC transporter family protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D DM42_6724 ABC transporter family protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D DM42_276 periplasmic binding s and sugar binding domain of LacI family protein K17213 K17213; inositol transport system substrate-binding protein D DM42_274 branched-chain amino acid transport system / permease component family protein K17214 K17214; inositol transport system permease protein D DM42_275 ABC transporter family protein K17215 K17215; inositol transport system ATP-binding protein D DM42_1426 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D DM42_1425 binding--dependent transport system inner membrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D DM42_1424 binding--dependent transport system inner membrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D DM42_1423 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D DM42_2474 bacterial extracellular solute-binding family protein K10227 smoE; polyol transport system substrate-binding protein D DM42_2475 binding--dependent transport system inner membrane component family protein K10228 smoF; polyol transport system permease protein D DM42_2476 binding--dependent transport system inner membrane component family protein K10229 smoG; polyol transport system permease protein D DM42_3414 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D DM42_3415 ABC transporter family protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D DM42_1405 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DM42_2173 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DM42_1406 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DM42_2171 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DM42_1407 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DM42_2172 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DM42_2174 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D DM42_1403 putative signal peptide protein K07323 mlaC; phospholipid transport system substrate-binding protein D DM42_5161 putative signal peptide protein K07323 mlaC; phospholipid transport system substrate-binding protein D DM42_1402 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein D DM42_5180 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D DM42_6029 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D DM42_6820 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D DM42_5053 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D DM42_5054 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein D DM42_6821 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein D DM42_5179 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein D DM42_6030 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein D DM42_5055 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D DM42_6822 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D DM42_5178 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D DM42_6031 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D DM42_7000 periplasmic binding s and sugar binding domain of LacI family protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D DM42_3726 periplasmic binding s and sugar binding domain of LacI family protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D DM42_7001 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein D DM42_7002 ccmA; heme ABC exporter, ATP-binding protein CcmA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D DM42_421 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D DM42_420 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D DM42_419 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D DM42_418 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DM42_981 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_536 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_5355 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_4213 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_1657 bacterial extracellular solute-binding s, 3 family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_6649 bacterial extracellular solute-binding s, 3 family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_5402 bacterial extracellular solute-binding s, 3 family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_4328 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_6452 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D DM42_2669 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein D DM42_546 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein D DM42_4326 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein D DM42_6454 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein D DM42_2670 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein D DM42_547 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein D DM42_4327 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein D DM42_6453 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein D DM42_2668 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D DM42_545 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D DM42_4325 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D DM42_6455 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D DM42_2671 lysine-arginine-ornithine-binding periplasmic family protein K10014 hisJ; histidine transport system substrate-binding protein D DM42_5214 lysine-arginine-ornithine-binding periplasmic family protein K10014 hisJ; histidine transport system substrate-binding protein D DM42_3883 Tat (twin-arginine translocation) pathway signal sequence domain protein K10036 glnH; glutamine transport system substrate-binding protein D DM42_3882 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10037 glnP; glutamine transport system permease protein D DM42_3881 ABC transporter family protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D DM42_1173 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D DM42_2914 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D DM42_1171 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein D DM42_1172 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein D DM42_1170 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D DM42_6586 bacterial extracellular solute-binding s, 3 family protein K10018 occT; octopine/nopaline transport system substrate-binding protein D DM42_6588 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10019 occM; octopine/nopaline transport system permease protein D DM42_6587 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10020 occQ; octopine/nopaline transport system permease protein D DM42_6589 ABC transporter family protein K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1] D DM42_6441 bacterial extracellular solute-binding s, 3 family protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D DM42_6443 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09970 aapQ; general L-amino acid transport system permease protein D DM42_6444 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09971 aapM; general L-amino acid transport system permease protein D DM42_6445 ABC transporter family protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D DM42_140 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_1818 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_1373 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_4695 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_141 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10009 tcyB; L-cystine transport system permease protein D DM42_4696 yecS; inner membrane amino-acid ABC transporter permease protein yecS K10009 tcyB; L-cystine transport system permease protein D DM42_1821 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D DM42_4697 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D DM42_557 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_2806 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4976 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_2591 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4480 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_5743 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_6614 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1695 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1668 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1691 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_1550 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_3871 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_3777 amiC; aliphatic amidase expression-regulating protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4642 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_6534 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_3602 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_5468 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DM42_4479 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_2570 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_5744 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_6615 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_286 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_1694 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_1690 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein D DM42_1689 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_5745 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_6616 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_285 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_1693 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_2571 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein D DM42_4478 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_2572 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_5746 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_6617 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_284 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_1697 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DM42_5747 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_6618 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_283 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_1696 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_2573 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_4477 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_1688 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DM42_5353 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein D DM42_2236 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein D DM42_5443 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein D DM42_766 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein D DM42_4519 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein D DM42_5446 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein D DM42_767 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein D DM42_5445 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein D DM42_768 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein D DM42_920 periplasmic binding domain protein K11959 urtA; urea transport system substrate-binding protein D DM42_4926 periplasmic binding domain protein K11959 urtA; urea transport system substrate-binding protein D DM42_921 urtB; urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein D DM42_4930 branched-chain amino acid transport system / permease component family protein K11960 urtB; urea transport system permease protein D DM42_922 urtC; urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein D DM42_4929 branched-chain amino acid transport system / permease component family protein K11961 urtC; urea transport system permease protein D DM42_4928 ABC transporter family protein K11962 urtD; urea transport system ATP-binding protein D DM42_923 urtD; urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D DM42_4927 ABC transporter family protein K11963 urtE; urea transport system ATP-binding protein D DM42_924 urtE; urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D DM42_2238 ABC transporter substrate binding family protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D DM42_2239 branched-chain amino acid transport system / permease component family protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein D DM42_2240 ABC transporter family protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D DM42_3522 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_3526 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_81 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_3621 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_7006 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_6771 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_6786 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_6737 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_6434 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_7266 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_5619 cytochrome c family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DM42_79 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein D DM42_80 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein D DM42_3620 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein D DM42_7264 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein D DM42_7265 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein D DM42_6433 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D DM42_3523 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D DM42_7005 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein D DM42_7004 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein D DM42_3619 ABC transporter family protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D DM42_7263 ABC transporter family protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D DM42_5256 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DM42_5257 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein D DM42_5258 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein D DM42_5259 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein D DM42_5260 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein D DM42_3971 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein D DM42_1964 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein D DM42_2148 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein D DM42_1965 binding--dependent transport system inner membrane component family protein K12369 dppB; dipeptide transport system permease protein D DM42_1966 binding--dependent transport system inner membrane component family protein K12370 dppC; dipeptide transport system permease protein D DM42_1967 hypothetical protein K12371 dppD; dipeptide transport system ATP-binding protein D DM42_1968 hypothetical protein K12372 dppF; dipeptide transport system ATP-binding protein D DM42_3799 bacterial extracellular solute-binding s, 5 Middle family protein K13889 gsiB; glutathione transport system substrate-binding protein D DM42_3798 binding--dependent transport system inner membrane component family protein K13890 gsiC; glutathione transport system permease protein D DM42_3797 gsiD; glutathione transport system permease protein gsiD K13891 gsiD; glutathione transport system permease protein D DM42_3800 nikE; nickel import ATP-binding protein NikE K13892 gsiA; glutathione transport system ATP-binding protein D DM42_6179 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DM42_6187 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DM42_7010 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DM42_6882 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DM42_6178 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D DM42_7011 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D DM42_6883 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D DM42_6177 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DM42_7012 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DM42_6884 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DM42_7013 nikE; nickel import ATP-binding protein NikE K02031 ddpD; peptide/nickel transport system ATP-binding protein D DM42_6885 nikE; nickel import ATP-binding protein NikE K02031 ddpD; peptide/nickel transport system ATP-binding protein D DM42_6176 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D DM42_6175 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D DM42_3479 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein D DM42_3030 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein D DM42_3480 binding--dependent transport system inner membrane component family protein K13894 yejB; microcin C transport system permease protein D DM42_3031 binding--dependent transport system inner membrane component family protein K13894 yejB; microcin C transport system permease protein D DM42_3481 binding--dependent transport system inner membrane component family protein K13895 yejE; microcin C transport system permease protein D DM42_3032 binding--dependent transport system inner membrane component family protein K13895 yejE; microcin C transport system permease protein D DM42_3482 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein D DM42_3033 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein D DM42_56 periplasmic binding family protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D DM42_58 fecCD transport family protein K23228 fhuB; ferric hydroxamate transport system permease protein D DM42_59 ABC transporter family protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D DM42_5346 hmuT; hemin-binding periplasmic protein hmuT K25132 hmuT; heme transport system substrate-binding protein D DM42_5345 fecCD transport family protein K25133 hmuU; heme transport system permease protein D DM42_5344 hmuV; hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D DM42_362 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D DM42_2618 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D DM42_361 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein D DM42_2613 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein D DM42_2614 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D DM42_363 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D DM42_2469 periplasmic solute binding family protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D DM42_2467 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D DM42_2468 ABC transporter family protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D DM42_1063 ABC-2 type transporter family protein K09688 kpsM; capsular polysaccharide transport system permease protein D DM42_1064 putative capsule export inner-membrane protein CtrB K10107 kpsE; capsular polysaccharide transport system permease protein D DM42_1062 ABC transporter family protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D DM42_953 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein D DM42_952 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D DM42_2601 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D DM42_2600 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D DM42_2280 ABC transporter family protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D DM42_102 ABC-2 type transporter, NodJ family protein K09694 nodJ; lipooligosaccharide transport system permease protein D DM42_101 nodI; nodulation ABC transporter NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein D DM42_5612 liporeleasing system, transmembrane , LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein D DM42_2974 liporeleasing system, transmembrane , LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein D DM42_2975 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D DM42_1400 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein D DM42_4856 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein D DM42_5639 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein D DM42_6694 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein D DM42_1401 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DM42_5640 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DM42_6695 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DM42_4858 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D DM42_2782 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D DM42_6711 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D DM42_6955 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D DM42_1527 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D DM42_1528 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D DM42_3182 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DM42_4859 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DM42_6712 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DM42_6954 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DM42_1526 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DM42_2039 sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D DM42_3265 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D DM42_736 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D DM42_406 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D DM42_7284 fucP; H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D DM42_6824 major Facilitator Superfamily protein K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D DM42_6893 MFS transporter, metabolite:H+ symporter family protein K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D DM42_6862 MFS transporter, metabolite:H+ symporter family protein K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D DM42_3494 sugar (and other) transporter family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D DM42_82 MFS transporter, metabolite:H+ symporter family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D DM42_6409 sugar (and other) transporter family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D DM42_439 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter D DM42_6718 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter D DM42_6404 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter D DM42_5467 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter D DM42_3939 sugar (and other) transporter family protein K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D DM42_3567 MFS transporter, metabolite:H+ symporter family protein K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D DM42_160 sugar (and other) transporter family protein K08178 JEN; MFS transporter, SHS family, lactate transporter D DM42_1533 D-galactonate transporter family protein K03535 gudP; MFS transporter, ACS family, glucarate transporter D DM42_6228 putative glucarate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D DM42_5459 putative glucarate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D DM42_3803 exuT; hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D DM42_4666 sugar (and other) transporter family protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D DM42_4343 major Facilitator Superfamily protein K13021 ttuB; MFS transporter, ACS family, tartrate transporter D DM42_5318 major Facilitator Superfamily protein K13021 ttuB; MFS transporter, ACS family, tartrate transporter D DM42_4523 major Facilitator Superfamily protein K13021 ttuB; MFS transporter, ACS family, tartrate transporter D DM42_5387 major Facilitator Superfamily protein K13021 ttuB; MFS transporter, ACS family, tartrate transporter D DM42_5392 major Facilitator Superfamily protein K13021 ttuB; MFS transporter, ACS family, tartrate transporter D DM42_6645 major Facilitator Superfamily protein K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D DM42_4723 dgoT; D-galactonate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D DM42_5474 major Facilitator Superfamily protein K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D DM42_1010 sugar (and other) transporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D DM42_7335 sugar (and other) transporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D DM42_5084 sugar (and other) transporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D DM42_2489 sugar (and other) transporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D DM42_3817 sugar (and other) transporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D DM42_5198 sugar (and other) transporter family protein K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter D DM42_2063 sugar (and other) transporter family protein K05548 benK; MFS transporter, AAHS family, benzoate transport protein D DM42_18 major Facilitator Superfamily protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D DM42_6269 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D DM42_7201 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D DM42_3059 major Facilitator Superfamily protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D DM42_1911 major Facilitator Superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D DM42_1075 tetA; tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D DM42_878 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D DM42_3706 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D DM42_6261 major Facilitator Superfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D DM42_7073 major Facilitator Superfamily protein K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D DM42_3982 major Facilitator Superfamily protein K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump D DM42_1006 sugar (and other) transporter family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D DM42_2381 sugar (and other) transporter family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D DM42_465 ydhP; inner membrane transport protein ydhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D DM42_5895 major Facilitator Superfamily protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D DM42_5370 major Facilitator Superfamily protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D DM42_4730 putative membrane protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D DM42_4297 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D DM42_6189 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D DM42_7036 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D DM42_4153 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D DM42_1732 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D DM42_194 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D DM42_3840 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D DM42_7233 major Facilitator Superfamily protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D DM42_4955 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D DM42_5653 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D DM42_6784 major Facilitator Superfamily protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein D DM42_4219 major Facilitator Superfamily protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein D DM42_4777 major Facilitator Superfamily protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein D DM42_5163 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein D DM42_6342 sugar (and other) transporter family protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein D DM42_3889 major Facilitator Superfamily protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein D DM42_2684 sugar (and other) transporter family protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D DM42_4130 major Facilitator Superfamily protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D DM42_256 major Facilitator Superfamily protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D DM42_6750 major Facilitator Superfamily protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D DM42_5773 sugar (and other) transporter family protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D DM42_6780 major Facilitator Superfamily protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D DM42_3989 sugar (and other) transporter family protein K08368 yaaU; MFS transporter, putative metabolite transport protein D DM42_5638 sugar (and other) transporter family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D DM42_5517 sugar (and other) transporter family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D DM42_3508 sugar (and other) transporter family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D DM42_6109 sugar (and other) transporter family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D DM42_2209 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D DM42_7021 PTS HPr component phosphorylation site family protein K02784 ptsH; phosphocarrier protein HPr D DM42_2208 phosphocarrier, HPr family protein K02784 ptsH; phosphocarrier protein HPr D DM42_2247 ptsP; phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D DM42_2248 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D DM42_2207 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DM42_2277 band 3 cytoplasmic domain protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D DM42_4546 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D DM42_1580 MIP channel s family protein K06188 aqpZ; aquaporin Z D DM42_2392 MIP channel s family protein K02440 glpF; glycerol uptake facilitator D DM42_3661 trkA-N domain protein K10716 kch; voltage-gated potassium channel D DM42_6153 trkA-N domain protein K10716 kch; voltage-gated potassium channel D DM42_4945 ion transport family protein K10716 kch; voltage-gated potassium channel D DM42_2119 putative inward rectifier potassium channel K08715 IRPC; inward rectifier potassium channel D DM42_519 ammonium Transporter family protein K03320 amt; ammonium transporter, Amt family D DM42_2204 amt; ammonium transporter family protein K03320 amt; ammonium transporter, Amt family D DM42_2836 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4500 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_5333 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_5310 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4107 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_1146 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4208 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4386 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_1531 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4719 gstB; glutathione S-transferase GST-6.0 K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_2112 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_2120 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_1977 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4313 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_6539 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_4573 gtt2; glutathione S-transferase 2 K00799 GST; glutathione S-transferase [EC:2.5.1.18] D DM42_1377 hypothetical protein K03599 sspA; stringent starvation protein A D DM42_3284 inhibitor of apoptosis-promoting Bax1 family protein K19416 yccA; modulator of FtsH protease D DM42_390 formate/nitrite transporter family protein K21993 fdhC; formate transporter D DM42_3146 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D DM42_5515 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel D DM42_1068 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D DM42_4975 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D DM42_4150 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel D DM42_6195 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel D DM42_6131 urea transporter family protein K08717 utp; urea transporter D DM42_3774 amiS/UreI transporter family protein K22112 amiS; putative amide transporter protein D DM42_4311 motA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D DM42_1575 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D DM42_4310 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB D DM42_1574 motB; motility protein B K02557 motB; chemotaxis protein MotB D DM42_4530 motA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D DM42_3473 motA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D DM42_1191 motA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D DM42_2867 motA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D DM42_4529 biopolymer transport ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD D DM42_1190 biopolymer transport ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD D DM42_3474 biopolymer transport ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD D DM42_3475 biopolymer transport ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD D DM42_2866 biopolymer transport ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD D DM42_1026 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D DM42_1027 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D DM42_3469 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D DM42_1353 corA-like Mg2+ transporter family protein K16074 zntB; zinc transporter D DM42_895 crcB; protein CrcB K06199 crcB; fluoride exporter D DM42_7183 bestrophin, RFP-TM, chloride channel family protein K08994 yneE; ion channel-forming bestrophin family protein D DM42_6191 bestrophin, RFP-TM, chloride channel family protein K08994 yneE; ion channel-forming bestrophin family protein D DM42_605 merT mercuric transport family protein K08363 merT; mercuric ion transport protein D DM42_606 merP; mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein D DM42_1261 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DM42_4204 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DM42_5679 gram-negative porin family protein K08720 ompU; outer membrane protein OmpU D DM42_1358 BON domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D DM42_788 ompA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D DM42_6731 ompA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D DM42_2641 outer membrane usher family protein K07347 fimD; outer membrane usher protein D DM42_6255 hypothetical protein K07347 fimD; outer membrane usher protein D DM42_1169 outer membrane autotransporter barrel domain protein K12678 aidA-I; autotransporter family porin D DM42_5825 autotransporter-associated beta strand repeat family protein K19231 bmaC; fibronectin-binding autotransporter adhesin D DM42_6816 autotransporter-associated beta strand repeat family protein K19231 bmaC; fibronectin-binding autotransporter adhesin D DM42_5994 TonB-dependent siderophore receptor family protein K16090 fiu; catecholate siderophore receptor D DM42_3904 TonB-dependent siderophore receptor family protein K16090 fiu; catecholate siderophore receptor D DM42_4651 TonB-dependent siderophore receptor family protein K16090 fiu; catecholate siderophore receptor D DM42_6365 tonB dependent receptor family protein K16092 btuB; vitamin B12 transporter D DM42_5769 fptA; fe(3+)-pyochelin receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D DM42_5348 TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D DM42_3515 tonB dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_4526 tonB dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_4138 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_6855 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_3478 tonB dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_3484 tonB dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_338 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_364 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_6828 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_41 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_50 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_4382 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_2882 fcuA; ferrichrome receptor fcuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_823 tonB dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_1585 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_5542 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_4659 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D DM42_4378 outer membrane efflux family protein K15725 czcC; outer membrane protein, heavy metal efflux system D DM42_3772 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_3786 type I secretion outer membrane , TolC family protein K12340 tolC; outer membrane protein D DM42_6085 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_5854 outer membrane efflux family protein K12543 lapE; outer membrane protein, adhesin transport system D DM42_5424 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18903 oprC; outer membrane protein, multidrug efflux system D DM42_3668 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18903 oprC; outer membrane protein, multidrug efflux system D DM42_7235 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18903 oprC; outer membrane protein, multidrug efflux system D DM42_4154 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18300 oprN; outer membrane protein, multidrug efflux system D DM42_6057 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18300 oprN; outer membrane protein, multidrug efflux system D DM42_74 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system D DM42_7395 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_2462 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_7282 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4608 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4853 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4161 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_5873 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4228 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D DM42_1065 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D DM42_3757 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D DM42_5937 carbohydrate-selective porin, OprB family protein K07267 oprB; porin D DM42_3087 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D DM42_3291 yfgL; outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB D DM42_213 nlpB/DapX lipofamily protein K07287 bamC; outer membrane protein assembly factor BamC D DM42_2994 nlpB/DapX lipofamily protein K07287 bamC; outer membrane protein assembly factor BamC D DM42_3308 yfiO; outer membrane assembly lipoYfiO family protein K05807 bamD; outer membrane protein assembly factor BamD D DM42_1193 smpA / OmlA family protein K06186 bamE; outer membrane protein assembly factor BamE D DM42_2630 surface antigen variable number repeat family protein K07278 tamA; translocation and assembly module TamA D DM42_2631 hypothetical protein K09800 tamB; translocation and assembly module TamB D DM42_6830 coiled stalk of trimeric autotransporter adhesin family protein K21449 ata; trimeric autotransporter adhesin D DM42_3976 coiled stalk of trimeric autotransporter adhesin family protein K21449 ata; trimeric autotransporter adhesin D DM42_6730 xadA; hemagluttinin family protein K21449 ata; trimeric autotransporter adhesin D DM42_2281 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D DM42_2282 lipopolysaccharide-assembly, LptC-related family protein K11719 lptC; lipopolysaccharide export system protein LptC D DM42_2361 organic solvent tolerance family protein K04744 lptD; LPS-assembly protein D DM42_1188 lipopolysaccharide-assembly family protein K03643 lptE; LPS-assembly lipoprotein D DM42_318 cellulose synthase operon C family protein K20543 bcsC; cellulose synthase operon protein C D DM42_2374 transporter associated domain protein K06189 corC; hemolysin (HlyC) family protein D DM42_1735 lrgA family protein K06518 cidA; holin-like protein D DM42_6560 lrgA family protein K06518 cidA; holin-like protein D DM42_4338 lysP; lysine-specific permease K11733 lysP; lysine-specific permease D DM42_5511 lysP; lysine-specific permease K11733 lysP; lysine-specific permease D DM42_4108 amino acid permease family protein K11733 lysP; lysine-specific permease D DM42_3612 amino acid permease family protein K11734 aroP; aromatic amino acid transport protein AroP D DM42_1321 gabP; GABA permease K11735 gabP; GABA permease D DM42_3918 amino acid permease family protein K11735 gabP; GABA permease D DM42_5850 amino acid permease family protein K11735 gabP; GABA permease D DM42_6461 amino acid permease family protein K11738 ansP; L-asparagine permease D DM42_7267 amino acid permease family protein K11738 ansP; L-asparagine permease D DM42_3900 amino acid permease family protein K11738 ansP; L-asparagine permease D DM42_509 amino acid permease family protein K16234 hutT; histidine transporter D DM42_6610 amino acid permease family protein K14052 puuP; putrescine importer D DM42_3979 potE; putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter D DM42_1649 eat; ethanolamine permease K16238 eat; ethanolamine permease D DM42_3782 amino acid permease family protein K16263 yjeH; amino acid efflux transporter D DM42_4604 cation diffusion facilitator transporter family protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D DM42_3561 cation diffusion facilitator transporter family protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D DM42_4368 ZIP Zinc transporter family protein K07238 TC.ZIP; zinc transporter, ZIP family D DM42_4375 czcA; cobalt-zinc-cadmium resistance protein CzcA K15726 czcA; heavy metal efflux system protein D DM42_5423 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18902 bpeF; multidrug efflux pump D DM42_3450 acrB/AcrD/AcrF family protein K18303 mexK; multidrug efflux pump D DM42_75 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18095 mexY; multidrug efflux pump D DM42_4607 RND transporter, hydrophobe/amphiphile efflux-1 family protein K19594 gesB; gold/copper resistance efflux pump D DM42_2461 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump D DM42_7396 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump D DM42_7281 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump D DM42_4160 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18146 adeB; multidrug efflux pump D DM42_5874 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18146 adeB; multidrug efflux pump D DM42_6056 RND transporter, hydrophobe/amphiphile efflux-1 family protein K19585 oqxB; multidrug efflux pump D DM42_523 MMPL family protein K07788 mdtB; multidrug efflux pump D DM42_524 acrB/AcrD/AcrF family protein K07789 mdtC; multidrug efflux pump D DM42_133 small Multidrug Resistance family protein K03297 emrE; small multidrug resistance pump D DM42_2780 sugE; quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE D DM42_6466 sugE; quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE D DM42_2504 eamA-like transporter family protein K15268 eamA; O-acetylserine/cysteine efflux transporter D DM42_5251 eamA-like transporter family protein K05786 rarD; chloramphenicol-sensitive protein RarD D DM42_5693 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D DM42_438 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D DM42_1180 transporter, gluconate:H+ symporter family protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D DM42_5026 kdgT; 2-keto-3-deoxygluconate transporter K02526 kdgT; 2-keto-3-deoxygluconate permease D DM42_2317 glcA; glycolate permease glcA K03303 lutP; lactate permease D DM42_1807 transporter, lactate permease family protein K03303 lutP; lactate permease D DM42_3806 transporter, betaine/carnitine/choline transporter family protein K02168 betT; choline/glycine/proline betaine transport protein D DM42_6236 sodium/calcium exchanger family protein K07300 chaA; Ca2+:H+ antiporter D DM42_4718 sodium/calcium exchanger family protein K07301 yrbG; cation:H+ antiporter D DM42_6492 transporter, solute:sodium symporter family protein K14393 actP; cation/acetate symporter D DM42_2877 putative sodium:solute symporter, subfamily protein K14393 actP; cation/acetate symporter D DM42_2195 transporter, solute:sodium symporter family protein K14393 actP; cation/acetate symporter D DM42_1197 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein D DM42_2196 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D DM42_6895 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein D DM42_4267 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D DM42_2124 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D DM42_309 sodium/hydrogen exchanger family protein K24163 nhaK; monovalent cation/hydrogen antiporter D DM42_7097 sodium/hydrogen exchanger family protein K24160 NHA1; sodium/hydrogen antiporter D DM42_2285 trkA-N domain protein K03455 KEA1_2_3; K+:H+ antiporter D DM42_3728 ketopantoate reductase PanE/ApbA family protein K26735 KEA4_5_6; K+:H+ antiporter D DM42_7165 permease for cytosine/purine, uracil, thiamine, allantoin family protein K23467 tgnP; trigonelline permease D DM42_1996 putative pyrimidine permease RutG K09016 rutG; putative pyrimidine permease RutG D DM42_2463 putative purine permease ygfU K24206 uacT; uric acid transporter D DM42_5720 putative purine permease ygfU K24206 uacT; uric acid transporter D DM42_3992 pbuX; xanthine permease family protein K16345 xanP; xanthine permease XanP D DM42_5361 putative permease yjcD K06901 pbuG; adenine/guanine/hypoxanthine permease D DM42_5787 permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease D DM42_5522 permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease D DM42_5008 benzoate transporter family protein K05782 benE; benzoate membrane transport protein D DM42_2724 benzoate transporter family protein K05782 benE; benzoate membrane transport protein D DM42_3453 CBS domain protein K03281 clcA; chloride channel protein, CIC family D DM42_3628 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family D DM42_6224 CBS domain protein K03281 clcA; chloride channel protein, CIC family D DM42_853 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family D DM42_4259 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family D DM42_1998 chromate transporter family protein K07240 chrA; chromate transporter D DM42_1999 chromate transporter family protein K07240 chrA; chromate transporter D DM42_6745 chr; chromate transporter, chromate ion transporter family protein K07240 chrA; chromate transporter D DM42_2706 chromate transporter family protein K07240 chrA; chromate transporter D DM42_2526 chr; chromate transporter, chromate ion transporter family protein K07240 chrA; chromate transporter D DM42_2539 hoxN; high-affinity nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D DM42_157 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family D DM42_6196 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family D DM42_6185 metal ion transporter, metal ion family protein K03322 mntH; manganese transport protein D DM42_4250 metal ion transporter, metal ion family protein K03322 mntH; manganese transport protein D DM42_7321 metal ion transporter, metal ion family protein K03322 mntH; manganese transport protein D DM42_6689 tripartite ATP-independent periplasmic transporter, DctQ component family protein K21394 yiaM; TRAP-type transport system small permease protein D DM42_6231 Tat (twin-arginine translocation) pathway signal sequence domain protein K21395 yiaO; TRAP-type transport system periplasmic protein D DM42_4948 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter D DM42_2518 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D DM42_3642 membrane transport family protein K13936 mdcF; malonate transporter and related proteins D DM42_6418 membrane transport family protein K13936 mdcF; malonate transporter and related proteins D DM42_3301 kup; potassium uptake protein K03549 kup; KUP system potassium uptake protein D DM42_5100 lysE type translocator family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D DM42_890 lysE type translocator family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D DM42_905 lysE type translocator family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D DM42_5777 lysE type translocator family protein K05834 rhtB; homoserine/homoserine lactone efflux protein D DM42_3660 lysE type translocator family protein K05834 rhtB; homoserine/homoserine lactone efflux protein D DM42_5534 lysE type translocator family protein K05834 rhtB; homoserine/homoserine lactone efflux protein D DM42_2883 lysE type translocator family protein K05834 rhtB; homoserine/homoserine lactone efflux protein D DM42_1521 lysE type translocator family protein K05834 rhtB; homoserine/homoserine lactone efflux protein D DM42_4543 lysE type translocator family protein K05835 rhtC; threonine efflux protein D DM42_6676 lysE type translocator family protein K05835 rhtC; threonine efflux protein D DM42_4403 lysE type translocator family protein K05835 rhtC; threonine efflux protein D DM42_4654 lysE type translocator family protein K05835 rhtC; threonine efflux protein D DM42_430 lysE type translocator family protein K11250 leuE; leucine efflux protein D DM42_731 azlC family protein K26605 azlC; branched chain amino acid efflux pump D DM42_2439 azlC family protein K26605 azlC; branched chain amino acid efflux pump D DM42_4784 azlC family protein K26605 azlC; branched chain amino acid efflux pump D DM42_2440 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump D DM42_732 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump D DM42_4785 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump D DM42_4558 tripartite tricarboxylate transporter TctA family protein K07793 tctA; putative tricarboxylic transport membrane protein D DM42_6086 fusaric acid resistance family protein K15547 mdtO; multidrug resistance protein MdtO D DM42_1393 marC integral membrane family protein K05595 marC; multiple antibiotic resistance protein D DM42_4946 marC integral membrane family protein K05595 marC; multiple antibiotic resistance protein D DM42_6240 marC integral membrane family protein K05595 marC; multiple antibiotic resistance protein D DM42_7150 marC integral membrane family protein K05595 marC; multiple antibiotic resistance protein D DM42_1281 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D DM42_812 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D DM42_2022 iron permease FTR1 family protein K07243 FTR; high-affinity iron transporter D DM42_2860 iron permease FTR1 family protein K07243 FTR; high-affinity iron transporter D DM42_2858 fe2+ transport family protein K07230 p19; periplasmic iron binding protein D DM42_4531 hypothetical protein K03832 tonB; periplasmic protein TonB D DM42_3472 hypothetical protein K03832 tonB; periplasmic protein TonB D DM42_2428 hypothetical protein K03832 tonB; periplasmic protein TonB D DM42_848 hypothetical protein K03832 tonB; periplasmic protein TonB D DM42_1030 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D DM42_3537 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D DM42_1028 tolA; protein TolA K03646 tolA; colicin import membrane protein D DM42_1029 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D DM42_451 mdcA; malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D DM42_450 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D DM42_7206 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D DM42_7205 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D DM42_7203 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D DM42_7037 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system D DM42_4152 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system D DM42_4956 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system D DM42_5656 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system D DM42_4296 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system D DM42_193 hlyD secretion family protein K03543 emrA; membrane fusion protein, multidrug efflux system D DM42_7234 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system D DM42_6087 efflux transporter, RND family, MFP subunit K15549 mdtN; membrane fusion protein, multidrug efflux system D DM42_3784 type I secretion membrane fusion , HlyD family protein K12537 hasE; membrane fusion protein, type I secretion system D DM42_4377 czcB; cobalt-zinc-cadmium resistance protein CzcB K15727 czcB; membrane fusion protein, heavy metal efflux system D DM42_5856 type I secretion membrane fusion , HlyD family protein K12542 lapC; membrane fusion protein, adhesin transport system D DM42_3767 hlyD secretion family protein K13408 cvaA; membrane fusion protein D DM42_5422 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D DM42_3451 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D DM42_76 efflux transporter, RND family, MFP subunit K18094 mexX; membrane fusion protein, multidrug efflux system D DM42_4606 efflux transporter, RND family, MFP subunit K19595 gesA; membrane fusion protein, gold/copper resistance efflux system D DM42_7397 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_2460 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_7280 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_4159 efflux transporter, RND family, MFP subunit K18145 adeA; membrane fusion protein, multidrug efflux system D DM42_5875 efflux transporter, RND family, MFP subunit K18145 adeA; membrane fusion protein, multidrug efflux system D DM42_6055 efflux transporter, RND family, MFP subunit K19586 oqxA; membrane fusion protein, multidrug efflux system D DM42_6635 efflux transporter, RND family, MFP subunit K19586 oqxA; membrane fusion protein, multidrug efflux system D DM42_522 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D DM42_5808 efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D DM42_4227 capsular exopolysaccharide family domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D DM42_3756 cobQ/CobB/MinD/ParA nucleotide binding domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D DM42_4381 pnuC; nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter D DM42_5997 entericidin EcnA/B family protein K16348 ecnB; entericidin B D DM42_7077 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D DM42_5290 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D DM42_6994 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D DM42_6084 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D DM42_4740 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D DM42_3140 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D DM42_2404 copper resistance D family protein K07245 pcoD; copper resistance protein D D DM42_4705 copper resistance D family protein K07245 pcoD; copper resistance protein D D DM42_2581 copC domain protein K07156 copC; copper resistance protein C D DM42_5780 copC domain protein K07156 copC; copper resistance protein C D DM42_4706 copC domain protein K07156 copC; copper resistance protein C D DM42_358 mltA-interacting MipA family protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:bced02044] D DM42_3772 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_3786 type I secretion outer membrane , TolC family protein K12340 tolC; outer membrane protein D DM42_6085 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_3785 type I secretion system ATPase family protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D DM42_3784 type I secretion membrane fusion , HlyD family protein K12537 hasE; membrane fusion protein, type I secretion system D DM42_5855 type I secretion system ATPase family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D DM42_5856 type I secretion membrane fusion , HlyD family protein K12542 lapC; membrane fusion protein, adhesin transport system D DM42_5854 outer membrane efflux family protein K12543 lapE; outer membrane protein, adhesin transport system D DM42_3767 hlyD secretion family protein K13408 cvaA; membrane fusion protein D DM42_3769 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D DM42_1720 type IV pilus biogenesis family protein K02452 gspC; general secretion pathway protein C D DM42_1717 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D D DM42_1718 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D DM42_1719 gspF; type II secretion system protein F K02455 gspF; general secretion pathway protein F D DM42_1721 gspG; type II secretion system protein G K02456 gspG; general secretion pathway protein G D DM42_1722 gspH; type II secretion system protein H K02457 gspH; general secretion pathway protein H D DM42_1723 gspI; type II secretion system protein I K02458 gspI; general secretion pathway protein I D DM42_1724 hypothetical protein K02459 gspJ; general secretion pathway protein J D DM42_1725 type II secretion system (T2SS), K family protein K02460 gspK; general secretion pathway protein K D DM42_1726 gspL; type II secretion system protein L K02461 gspL; general secretion pathway protein L D DM42_1727 type II secretion system (T2SS), M family protein K02462 gspM; general secretion pathway protein M D DM42_1728 type II secretion system (T2SS), N family protein K02463 gspN; general secretion pathway protein N D DM42_1264 outO; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D DM42_2426 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D DM42_1262 type II/IV secretion system family protein K02652 pilB; type IV pilus assembly protein PilB D DM42_1263 type II secretion system (T2SS), F family protein K02653 pilC; type IV pilus assembly protein PilC D DM42_1021 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE D DM42_1430 pilQ; type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ D DM42_4098 putative fimV C-domain protein K08086 fimV; pilus assembly protein FimV D DM42_5566 hypothetical protein K08086 fimV; pilus assembly protein FimV D DM42_6796 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D DM42_179 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D DM42_6798 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D DM42_177 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D DM42_6799 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC D DM42_176 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC D DM42_6804 cobQ/CobB/MinD/ParA nucleotide binding domain protein K02282 cpaE; pilus assembly protein CpaE D DM42_174 response regulator K02282 cpaE; pilus assembly protein CpaE D DM42_6805 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D DM42_173 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D DM42_6806 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B D DM42_172 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B D DM42_6807 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C D DM42_171 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C D DM42_170 TPR repeat family protein K27079 tadD; tight adherence protein D D DM42_168 tad-like Flp pilus-assembly family protein K27080 tadG; tight adherence protein G D DM42_6793 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_6794 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_180 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_6795 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_893 YGGT family protein K02221 yggT; YggT family protein D DM42_773 type II secretion system (T2SS), K family protein K02237 comEA; competence protein ComEA D DM42_3255 helix-hairpin-helix motif family protein K02237 comEA; competence protein ComEA D DM42_2977 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D DM42_5945 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C D DM42_5949 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J D DM42_5950 YOP s translocation K family protein K04054 yscK; type III secretion protein K D DM42_5951 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L D DM42_5952 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D DM42_5960 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q D DM42_5959 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R D DM42_5944 type III secretion , HrpO family protein K03227 yscS; type III secretion protein S D DM42_5954 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T D DM42_5955 flhB HrpN YscU SpaS family protein K03229 yscU; type III secretion protein U D DM42_5943 type III secretion , HrcV family protein K03230 yscV; type III secretion protein V D DM42_1560 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D DM42_1561 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D DM42_1950 flhB HrpN YscU SpaS family protein K04061 flhB2; flagellar biosynthesis protein D DM42_1945 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D DM42_1943 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH D DM42_1942 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DM42_1739 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D DM42_1740 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D DM42_1741 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D DM42_1742 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D DM42_1743 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D DM42_4822 transglycosylase SLT domain protein K03194 virB1; type IV secretion system protein VirB1 D DM42_5958 transglycosylase SLT domain protein K03194 virB1; type IV secretion system protein VirB1 D DM42_4821 trbC/VIRB2 family protein K03197 virB2; type IV secretion system protein VirB2 D DM42_4820 ptlC; type IV secretion system protein ptlC K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D DM42_4818 virB5; P-type DNA transfer protein VirB5 K03200 virB5; type IV secretion system protein VirB5 D DM42_4819 trbL/VirB6 plasmid conjugal transfer family protein K03201 virB6; type IV secretion system protein VirB6 D DM42_4816 virB8 family protein K03203 virB8; type IV secretion system protein VirB8 D DM42_4815 conjugal transfer family protein K03204 virB9; type IV secretion system protein VirB9 D DM42_4814 bacterial conjugation TrbI-like family protein K03195 virB10; type IV secretion system protein VirB10 D DM42_4813 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D DM42_4811 type IV secretory system Conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D DM42_2056 type IV secretory system Conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D DM42_4592 type IV secretory system Conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D DM42_584 cobQ/CobB/MinD/ParA nucleotide binding domain protein K12055 K12055; chromosome partitioning related protein ParA D DM42_656 traI; integrating conjugative element relaxase, PFGI-1 class K12070 traI; conjugal transfer pilus assembly protein TraI D DM42_631 traD; conjugative coupling factor TraD, PFGI-1 class K12071 traD; conjugal transfer pilus assembly protein TraD D DM42_1317 DSBA-like thioredoxin domain protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D DM42_2052 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D DM42_4590 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D DM42_2051 trbC/VIRB2 family protein K20528 trbC; type IV secretion system protein TrbC D DM42_4589 trbC/VIRB2 family protein K20528 trbC; type IV secretion system protein TrbC D DM42_4588 type IV secretory pathway, VirB3-like family protein K20529 trbD; type IV secretion system protein TrbD D DM42_2050 type IV secretory pathway, VirB3-like family protein K20529 trbD; type IV secretion system protein TrbD D DM42_2049 cagE, TrbE, VirB , component of type IV transporter system family protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D DM42_4587 cagE, TrbE, VirB , component of type IV transporter system family protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D DM42_4583 virB8 family protein K20531 trbF; type IV secretion system protein TrbF D DM42_2046 virB8 family protein K20531 trbF; type IV secretion system protein TrbF D DM42_2045 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D DM42_4582 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D DM42_2044 bacterial conjugation TrbI-like family protein K20533 trbI; type IV secretion system protein TrbI D DM42_4581 bacterial conjugation TrbI-like family protein K20533 trbI; type IV secretion system protein TrbI D DM42_4586 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D DM42_2048 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D DM42_4584 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D DM42_2047 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D DM42_1169 outer membrane autotransporter barrel domain protein K12678 aidA-I; autotransporter family porin D DM42_1356 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL D DM42_1370 type IV/VI secretion system , DotU family domain protein K11892 impK; type VI secretion system protein ImpK D DM42_1369 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ D DM42_1361 hypothetical protein K11895 impH; type VI secretion system protein ImpH D DM42_7347 hypothetical protein K11896 impG; type VI secretion system protein ImpG D DM42_1362 hypothetical protein K11896 impG; type VI secretion system protein ImpG D DM42_396 hypothetical protein K11896 impG; type VI secretion system protein ImpG D DM42_1363 25-like lysozyme family protein K11897 impF; type VI secretion system protein ImpF D DM42_1365 hypothetical protein K11900 impC; type VI secretion system protein ImpC D DM42_1366 hypothetical protein K11901 impB; type VI secretion system protein ImpB D DM42_1359 hypothetical protein K11902 impA; type VI secretion system protein ImpA D DM42_1364 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp D DM42_5737 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_395 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_7346 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_845 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_5030 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_2884 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_347 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_350 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_5104 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D DM42_1368 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD D DM42_1360 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG D DM42_1357 hypothetical protein K11890 impM; type VI secretion system protein ImpM D DM42_70 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin) D DM42_73 fimA; type-1 fimbrial protein, A chain K07345 fimA; major type 1 subunit fimbrin (pilin) D DM42_6253 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin) D DM42_2642 hypothetical protein K07346 fimC; fimbrial chaperone protein D DM42_71 hypothetical protein K07346 fimC; fimbrial chaperone protein D DM42_2641 outer membrane usher family protein K07347 fimD; outer membrane usher protein D DM42_6255 hypothetical protein K07347 fimD; outer membrane usher protein D DM42_2643 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D DM42_2644 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D DM42_72 hypothetical protein K12518 papC; outer membrane usher protein PapC D DM42_1271 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DM42_2215 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D DM42_1121 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D DM42_1487 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D DM42_1122 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D DM42_2811 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D DM42_1453 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D DM42_1249 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DM42_2260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DM42_1120 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D DM42_1790 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D DM42_1385 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA D DM42_1384 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D DM42_1383 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:bced02042] D DM42_1261 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DM42_4204 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DM42_5238 channel , hemolysin III family protein K11068 hlyIII; hemolysin III D DM42_1809 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_556 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_3615 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_4744 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_5264 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D DM42_5553 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 02022 Two-component system [BR:bced02022] D DM42_415 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DM42_416 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D DM42_6244 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D DM42_2675 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D DM42_3158 putative oxidative stress related two component system, sensor kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D DM42_7278 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D DM42_2674 hypothetical protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D DM42_3159 ompR; transcriptional regulatory protein ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D DM42_7279 hypothetical protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D DM42_6006 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D DM42_6005 hypothetical protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D DM42_3670 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_4373 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_7273 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_4713 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_3669 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_4374 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_7275 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_4712 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_4823 HAMP domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D DM42_4835 his Kinase A domain protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D DM42_4824 hypothetical protein K07666 qseB; two-component system, OmpR family, response regulator QseB D DM42_2777 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D DM42_2778 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D DM42_4475 his Kinase A domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D DM42_1747 his Kinase A domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D DM42_3704 HAMP domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D DM42_4474 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD D DM42_3705 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD D DM42_1748 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD D DM42_5052 HAMP domain protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D DM42_5884 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_5051 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_5872 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_4162 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_5820 his Kinase A domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D DM42_360 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D DM42_2452 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D DM42_7034 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D DM42_3022 response regulator K02483 K02483; two-component system, OmpR family, response regulator D DM42_5529 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D DM42_359 response regulator K02483 K02483; two-component system, OmpR family, response regulator D DM42_5819 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D DM42_66 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D DM42_2419 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D DM42_2451 response regulator K02483 K02483; two-component system, OmpR family, response regulator D DM42_1705 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D DM42_1331 response regulator K02483 K02483; two-component system, OmpR family, response regulator D DM42_3024 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D DM42_5835 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D DM42_5164 bacterial regulatory s, luxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D DM42_6258 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D DM42_6257 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D DM42_5979 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D DM42_6252 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D DM42_5165 histidine kinase family protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D DM42_3555 histidine kinase family protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D DM42_2939 sensory box protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D DM42_2940 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D DM42_1889 HAMP domain protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D DM42_1890 bacterial regulatory , Fis family protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D DM42_686 bacterial regulatory , Fis family protein K07713 zraR; two-component system, NtrC family, response regulator HydG D DM42_2197 his Kinase A domain protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D DM42_5440 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D DM42_5439 bacterial regulatory , Fis family protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D DM42_2198 AAA domain family protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D DM42_6759 his Kinase A domain protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DM42_1572 cheW-like domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DM42_3896 HAMP domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DM42_1566 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_1573 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_3892 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_7318 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DM42_1567 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DM42_7319 sensory box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DM42_4261 cheW-like domain protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D DM42_3930 diguanylate cyclase domain protein K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D DM42_4260 cheB methylesterase family protein K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D DM42_3929 cheB methylesterase family protein K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D DM42_6543 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D DM42_1918 his Kinase A domain protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D DM42_1919 bacterial regulatory , Fis family protein K15012 regA; two-component system, response regulator RegA D DM42_6266 NMT1-like family protein K22067 nasS; two-component system, oxyanion-binding sensor D DM42_6267 response regulator K07183 nasT; two-component system, response regulator / RNA-binding antiterminator C 02035 Bacterial motility proteins [BR:bced02035] D DM42_1572 cheW-like domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DM42_3896 HAMP domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DM42_1571 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW D DM42_5151 cheC-like family protein K03410 cheC; chemotaxis protein CheC D DM42_1568 cheD chemotactic sensory transduction family protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DM42_1569 cheR methyltransferase, all-alpha domain protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DM42_7318 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DM42_1567 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DM42_7319 sensory box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DM42_1566 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_1573 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_3892 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DM42_1565 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D DM42_3663 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_2235 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_5614 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_255 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_4309 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_5980 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_3587 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein D DM42_86 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_1570 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_5289 tar; methyl-accepting chemotaxis protein II K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_6146 methyl-accepting chemotaxis (MCP) signaling domain protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_6670 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D DM42_5409 sensory box protein K03776 aer; aerotaxis receptor D DM42_5411 aer; aerotaxis receptor K03776 aer; aerotaxis receptor D DM42_1943 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH D DM42_1942 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DM42_1941 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D DM42_1740 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D DM42_1741 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D DM42_1742 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D DM42_1743 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D DM42_1560 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D DM42_1561 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D DM42_1944 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D DM42_1738 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D DM42_1739 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D DM42_1945 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D DM42_1991 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI D DM42_1983 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D DM42_1990 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH D DM42_1737 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D DM42_1946 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D DM42_1940 flagellar hook-length control FliK family protein K02414 fliK; flagellar hook-length control protein FliK D DM42_1984 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D DM42_1985 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D DM42_1986 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D DM42_1988 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D DM42_1989 flgF; flagellar basal-body rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG D DM42_1992 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D DM42_1987 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE D DM42_4099 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE D DM42_1994 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D DM42_1995 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D DM42_1981 flgN family protein K02399 flgN; flagellar biosynthesis protein FlgN D DM42_1587 hypothetical protein K02406 fliC; flagellin D DM42_6578 flagellar hook-associated family protein K02407 fliD; flagellar hook-associated protein 2 D DM42_1588 flagellar hook-associated family protein K02407 fliD; flagellar hook-associated protein 2 D DM42_1947 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D DM42_1948 flagellar FliT family protein K02423 fliT; flagellar protein FliT D DM42_1589 flagellar FliT family protein K02423 fliT; flagellar protein FliT D DM42_1577 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD D DM42_1576 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D DM42_1557 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA D DM42_4311 motA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D DM42_1575 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D DM42_4310 membrane MotB of proton-channel complex MotA/MotB family protein K02557 motB; chemotaxis protein MotB D DM42_1574 motB; motility protein B K02557 motB; chemotaxis protein MotB D DM42_140 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_1818 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_1373 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_4695 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein D DM42_1982 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D DM42_1559 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D DM42_1558 cobQ/CobB/MinD/ParA nucleotide binding domain protein K04562 flhG; flagellar biosynthesis protein FlhG D DM42_2426 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D DM42_1262 type II/IV secretion system family protein K02652 pilB; type IV pilus assembly protein PilB D DM42_1263 type II secretion system (T2SS), F family protein K02653 pilC; type IV pilus assembly protein PilC D DM42_1264 outO; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D DM42_1430 pilQ; type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ D DM42_1021 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE D DM42_6793 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_6794 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_180 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_6795 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA D DM42_6796 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D DM42_179 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D DM42_6798 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D DM42_177 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D DM42_6799 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC D DM42_176 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC D DM42_6804 cobQ/CobB/MinD/ParA nucleotide binding domain protein K02282 cpaE; pilus assembly protein CpaE D DM42_174 response regulator K02282 cpaE; pilus assembly protein CpaE D DM42_6805 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D DM42_173 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D DM42_70 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin) D DM42_73 fimA; type-1 fimbrial protein, A chain K07345 fimA; major type 1 subunit fimbrin (pilin) D DM42_6253 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin) D DM42_2642 hypothetical protein K07346 fimC; fimbrial chaperone protein D DM42_71 hypothetical protein K07346 fimC; fimbrial chaperone protein D DM42_2641 outer membrane usher family protein K07347 fimD; outer membrane usher protein D DM42_6255 hypothetical protein K07347 fimD; outer membrane usher protein D DM42_2643 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D DM42_2644 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins [BR:bced03037] D DM42_2129 suppressor of fused family protein K06229 SUFU; suppressor of fused C 04812 Cytoskeleton proteins [BR:bced04812] D DM42_5823 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins D DM42_1901 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins D DM42_1275 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DM42_1276 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D DM42_857 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D DM42_856 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D DM42_855 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D DM42_7407 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_2296 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_2625 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_5144 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_1685 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_2080 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_4617 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D DM42_7406 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_5143 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_1684 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_2090 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DM42_4625 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:bced04147] D DM42_2714 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG D DM42_2981 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DM42_1204 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DM42_2441 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DM42_2442 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DM42_3007 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D DM42_5665 membrane dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D DM42_969 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_4839 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_7324 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_4542 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DM42_1086 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D DM42_3183 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DM42_5386 strictosidine synthase family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D DM42_3107 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D DM42_1475 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D DM42_1489 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D DM42_1386 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DM42_5335 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DM42_2039 sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D DM42_1292 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_162 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_5880 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_7303 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_2510 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DM42_2496 56kDa selenium binding family protein K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4] D DM42_3196 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_3312 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_2298 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7363 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_5898 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_7297 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6329 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_6335 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D DM42_1556 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D DM42_2520 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D DM42_2286 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D DM42_2640 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DM42_4341 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DM42_4110 N(G),N(G)-dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18] D DM42_7357 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D DM42_1008 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D DM42_815 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DM42_7084 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D DM42_3988 hypothetical protein K00864 glpK; glycerol kinase [EC:2.7.1.30] D DM42_2393 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D DM42_5906 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2016 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2923 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_2938 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DM42_1443 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D DM42_3566 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D DM42_1508 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D DM42_1703 pterin 4 alpha carbinolamine dehydratase family protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D DM42_4762 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DM42_4763 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DM42_1878 putative d-3-phosphoglycerate dehydrogenase oxidoreductase protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_5385 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_6234 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D DM42_1151 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DM42_750 peptidase M48 family protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D DM42_476 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_187 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2953 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DM42_2059 electron transfer flavodomain protein K03522 fixB; electron transfer flavoprotein alpha subunit D DM42_764 electron transfer flavodomain protein K03522 fixB; electron transfer flavoprotein alpha subunit D DM42_6352 electron transfer flavodomain protein K03522 fixB; electron transfer flavoprotein alpha subunit D DM42_1174 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D DM42_5372 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DM42_874 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DM42_2810 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DM42_2212 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DM42_6903 lipocalin-like domain protein K03098 APOD; apolipoprotein D and lipocalin family protein D DM42_6908 lipocalin-like domain protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:bced02048] D DM42_4094 DNA methylase family protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D DM42_1752 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5] D DM42_1751 DNA methylase family protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D DM42_3568 HNH endonuclease family protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D DM42_6929 restriction endonuclease family protein K07448 mrr; restriction system protein D DM42_1037 pemK-like family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D DM42_3571 antidote-toxin recognition MazE family protein K07172 mazE; antitoxin MazE D DM42_654 toxin with endonuclease activity YhaV family protein K19155 yhaV; toxin YhaV [EC:3.1.-.-] D DM42_655 transcriptional regulator, AbrB family domain protein K19156 prlF; antitoxin PrlF D DM42_6183 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DM42_6996 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DM42_6182 helix-turn-helix family protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D DM42_46 parD-1; antitoxin protein parD-1 K07746 parD1_3_4; antitoxin ParD1/3/4 D DM42_3897 PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D DM42_1637 PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D DM42_3898 antidote-toxin recognition MazE family protein K18829 mvpT; antitoxin VapB D DM42_1638 antidote-toxin recognition MazE family protein K18829 mvpT; antitoxin VapB D DM42_6320 PIN domain protein K07062 fitB; toxin FitB [EC:3.1.-.-] D DM42_4802 PIN domain protein K07062 fitB; toxin FitB [EC:3.1.-.-] D DM42_5995 PIN domain protein K07062 fitB; toxin FitB [EC:3.1.-.-] D DM42_6319 hypothetical protein K21495 fitA; antitoxin FitA D DM42_1275 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DM42_5823 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins D DM42_1901 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins D DM42_2702 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D DM42_2701 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D DM42_3036 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DM42_4115 flavinator of succinate dehydrogenase family protein K09159 cptB; antitoxin CptB D DM42_4355 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_4698 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DM42_2962 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:bced04052] D DM42_5921 nicotinate phosphoribosyltransferase family protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules [BR:bced04090] C 01504 Antimicrobial resistance genes [BR:bced01504] D DM42_4074 nucleotidyltransferase domain protein K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47] D DM42_4158 neo; aminoglycoside 3'-phosphotransferase K19300 aph3-II; aminoglycoside 3'-phosphotransferase II [EC:2.7.1.95] D DM42_5341 aminoglycoside/hydroxyurea antibiotic resistance kinase family protein K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D DM42_1075 tetA; tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D DM42_6598 pentapeptide repeats family protein K18555 qnr; fluoroquinolone resistance protein D DM42_5829 blaCTX; beta-lactamase CTX-M-27 K17836 penP; beta-lactamase class A [EC:3.5.2.6] D DM42_3670 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_4373 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_7273 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_4713 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D DM42_3669 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_4374 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_7275 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_4712 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D DM42_6180 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DM42_6277 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D DM42_7397 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_2460 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_7280 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D DM42_2461 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump D DM42_7396 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump D DM42_7281 acrB; acriflavine resistance protein B K18138 acrB; multidrug efflux pump D DM42_74 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system D DM42_7395 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_2462 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_7282 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4608 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4853 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4161 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_5873 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system D DM42_4154 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18300 oprN; outer membrane protein, multidrug efflux system D DM42_6057 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18300 oprN; outer membrane protein, multidrug efflux system D DM42_3451 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D DM42_3450 acrB/AcrD/AcrF family protein K18303 mexK; multidrug efflux pump D DM42_77 putative transcriptional regulator K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor D DM42_76 efflux transporter, RND family, MFP subunit K18094 mexX; membrane fusion protein, multidrug efflux system D DM42_75 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18095 mexY; multidrug efflux pump D DM42_2850 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D DM42_6833 merR regulatory family protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D DM42_4606 efflux transporter, RND family, MFP subunit K19595 gesA; membrane fusion protein, gold/copper resistance efflux system D DM42_4607 RND transporter, hydrophobe/amphiphile efflux-1 family protein K19594 gesB; gold/copper resistance efflux pump D DM42_5052 HAMP domain protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D DM42_5884 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_5051 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_5872 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_4162 hypothetical protein K18144 adeR; two-component system, OmpR family, response regulator AdeR D DM42_4159 efflux transporter, RND family, MFP subunit K18145 adeA; membrane fusion protein, multidrug efflux system D DM42_5875 efflux transporter, RND family, MFP subunit K18145 adeA; membrane fusion protein, multidrug efflux system D DM42_4160 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18146 adeB; multidrug efflux pump D DM42_5874 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18146 adeB; multidrug efflux pump D DM42_3772 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_3786 type I secretion outer membrane , TolC family protein K12340 tolC; outer membrane protein D DM42_6085 outer membrane efflux family protein K12340 tolC; outer membrane protein D DM42_5420 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_7241 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_2415 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_4346 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_4407 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_6163 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D DM42_5422 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D DM42_5423 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18902 bpeF; multidrug efflux pump D DM42_5424 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18903 oprC; outer membrane protein, multidrug efflux system D DM42_3668 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18903 oprC; outer membrane protein, multidrug efflux system D DM42_7235 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18903 oprC; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bced00537] D DM42_4762 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DM42_4763 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DM42_5936 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D DM42_5665 membrane dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:bced03100] D DM42_1535 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_3037 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_1296 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_5485 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_2847 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_7372 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_1495 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DM42_1625 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_2697 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_832 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_834 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_833 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DM42_727 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DM42_728 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DM42_3041 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DM42_3039 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DM42_3043 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DM42_3179 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DM42_579 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D DM42_2268 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DM42_3038 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DM42_3040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DM42_3042 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DM42_907 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DM42_580 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DM42_681 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DM42_680 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DM42_1491 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DM42_123 tRNA-His K14226 tRNA-His; tRNA His D DM42_1297 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DM42_2846 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DM42_5484 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DM42_7373 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DM42_1496 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DM42_2590 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_2812 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_5775 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_3164 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_149 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_151 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DM42_1875 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DM42_1032 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DM42_2943 tRNA-Met K14230 tRNA-Met; tRNA Met D DM42_135 tRNA-Met K14230 tRNA-Met; tRNA Met D DM42_2692 tRNA-Met K14230 tRNA-Met; tRNA Met D DM42_2416 tRNA-Met K14230 tRNA-Met; tRNA Met D DM42_4168 tRNA-Met K14230 tRNA-Met; tRNA Met D DM42_1891 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D DM42_1260 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DM42_214 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DM42_411 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DM42_3014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DM42_860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DM42_2881 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DM42_842 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DM42_1375 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DM42_1490 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DM42_816 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DM42_1488 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D DM42_1492 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D DM42_226 tRNA-Val K14237 tRNA-Val; tRNA Val D DM42_1761 tRNA-Val K14237 tRNA-Val; tRNA Val D DM42_2925 tRNA-Val K14237 tRNA-Val; tRNA Val D DM42_3178 tRNA-Val K14237 tRNA-Val; tRNA Val D DM42_1768 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_5483 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_2845 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_7374 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_1497 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_1298 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DM42_1769 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_5486 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_2848 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_7371 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_1295 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_1494 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DM42_1770 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_2849 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_5487 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_1493 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_7370 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DM42_1294 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D DM42_1202 gno; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D DM42_5105 aldo/keto reductase family protein K05882 E1.1.1.91; aryl-alcohol dehydrogenase (NADP+) [EC:1.1.1.91] D DM42_5698 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D DM42_456 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D DM42_5249 3-beta hydroxysteroid dehydrogenase/isomerase family protein K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219] D DM42_1201 zinc-binding dehydrogenase family protein K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D DM42_5221 short chain dehydrogenase family protein K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320] D DM42_5367 aldo/keto reductase family protein K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D DM42_5588 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410] D DM42_5593 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D DM42_1933 aldo/keto reductase family protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D DM42_3261 acoA; 2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D DM42_3262 acoB; 2,6-dichlorophenolindophenol oxidoreductase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D DM42_5986 zinc-binding dehydrogenase family protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-] D DM42_6158 membrane bound FAD containing D-sorbitol dehydrogenase family protein K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14] D DM42_6213 membrane bound FAD containing D-sorbitol dehydrogenase family protein K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14] D DM42_6241 aldo/keto reductase family protein K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D DM42_7064 aldo/keto reductase family protein K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D DM42_1938 aldehyde dehydrogenase family protein K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D DM42_1510 hypothetical protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D DM42_2123 hypothetical protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D DM42_4287 flavin oxidoreductase / NADH oxidase family protein K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D DM42_373 flavin oxidoreductase / NADH oxidase family protein K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D DM42_3551 zinc-binding dehydrogenase family protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D DM42_5625 pqqC; coenzyme PQQ biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D DM42_5728 iorA; isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D DM42_379 [2Fe-2S] binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D DM42_5963 [2Fe-2S] binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D DM42_6815 [2Fe-2S] binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D DM42_529 iorA; isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D DM42_3549 [2Fe-2S] binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D DM42_5729 molybdopterin-binding domain of aldehyde dehydrogenase family protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D DM42_378 molybdopterin-binding domain of aldehyde dehydrogenase family protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D DM42_5962 molybdopterin-binding domain of aldehyde dehydrogenase family protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D DM42_6814 molybdopterin-binding domain of aldehyde dehydrogenase family protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D DM42_528 molybdopterin-binding domain of aldehyde dehydrogenase family protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D DM42_3548 molybdopterin-binding domain of aldehyde dehydrogenase family protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D DM42_4435 ketopantoate reductase PanE/ApbA family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28] D DM42_239 FAD binding domain protein K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D DM42_7298 FAD binding domain protein K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D DM42_375 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DM42_6144 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DM42_12 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DM42_484 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DM42_2771 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DM42_2809 NAD(P)H quinone oxidoreductase, PIG3 family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DM42_5045 NAD(P)H quinone oxidoreductase, PIG3 family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DM42_3411 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D DM42_1315 NADPH-dependent FMN reductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D DM42_5821 NADPH-dependent FMN reductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D DM42_6675 NADPH-dependent FMN reductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D DM42_6721 NADPH-dependent FMN reductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D DM42_3875 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D DM42_5538 cytochrome c family protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D DM42_7352 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D DM42_2497 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D DM42_3191 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D DM42_7350 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D DM42_2834 hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D DM42_16 hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D DM42_6061 hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D DM42_1438 oxidoreductase molybdopterin binding domain protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D DM42_6491 prokaryotic cytochrome b561 family protein K12262 cybB; superoxide oxidase [EC:1.10.3.17] D DM42_3616 cytochrome c family protein K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D DM42_298 cytochrome c family protein K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D DM42_7322 manganese containing catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6] D DM42_7217 cpo; non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D DM42_7232 cpo; non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D DM42_6552 cpo; non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D DM42_6834 alpha/beta hydrolase fold family protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D DM42_3236 redoxin family protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D DM42_533 redoxin family protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D DM42_1240 ahpC/TSA family protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D DM42_1017 hypothetical protein K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D DM42_3874 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D DM42_3495 peroxiredoxin, Ohr subfamily protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D DM42_4191 peroxiredoxin, Ohr subfamily protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D DM42_6558 peroxiredoxin, Ohr subfamily protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D DM42_5229 peroxiredoxin, Ohr subfamily protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D DM42_3156 alkylhydroperoxidase AhpD family core domain protein K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D DM42_3157 redoxin family protein K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D DM42_4254 Dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D DM42_678 Dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D DM42_7160 Dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D DM42_2864 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D DM42_6564 cupin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D DM42_2672 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D DM42_570 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D DM42_3693 cysteine dioxygenase type I K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91] D DM42_6785 csiD family protein K18058 asnO; L-asparagine oxygenase [EC:1.14.11.39] D DM42_3970 taurine catabolism dioxygenase TauD, TfdA family protein K22303 atsK; alkyl sulfatase [EC:1.14.11.77] D DM42_3969 putative alkylsulfatase K22303 atsK; alkyl sulfatase [EC:1.14.11.77] D DM42_5992 2OG-Fe(II) oxygenase superfamily protein K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D DM42_1102 hmp; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D DM42_6477 oxidoreductase NAD-binding domain protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D DM42_51 FAD-NAD(P)-binding family protein K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196] D DM42_4446 hypothetical protein K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235] D DM42_6839 FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D DM42_7003 ladA; alkane monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D DM42_5444 FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D DM42_607 merA; mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D DM42_4708 multicopper oxidase family protein K22348 moxA; manganese oxidase [EC:1.16.3.3] D DM42_5156 FAD dependent oxidoreductase family protein K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1] D DM42_1956 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D DM42_5145 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D DM42_4949 low molecular weight phosphotyrosine phosphatase family protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D DM42_5627 pqqE; coenzyme PQQ biosynthesis enzyme PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D DM42_3278 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D DM42_918 spermine/spermidine synthase family protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D DM42_6480 histone methylation DOT1 family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D DM42_2499 methyltransferase domain protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D DM42_6907 methyltransferase domain protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D DM42_6911 methyltransferase domain protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D DM42_4747 methyltransferase domain protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D DM42_7138 carbamoyltransferase family protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D DM42_4412 acetyltransferase domain protein K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D DM42_6124 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D DM42_2373 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D DM42_7009 acetyltransferase family protein K00680 ytmI; uncharacterized N-acetyltransferase [EC:2.3.1.-] D DM42_3187 acetyltransferase domain protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D DM42_3112 hypothetical protein K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D DM42_576 putative antibiotic resistance K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D DM42_137 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D DM42_138 hypothetical protein K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D DM42_7126 glycosyl transferases group 1 family protein K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D DM42_446 mdcB; triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D DM42_5155 hpnD; squalene synthase HpnD K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103] D DM42_2608 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D DM42_5592 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D DM42_3095 kinase/pyrophosphorylase family protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D DM42_1095 glutamate-ammonia ligase adenylyltransferase family protein K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D DM42_4059 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D DM42_4086 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D DM42_6593 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D DM42_1184 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D DM42_3635 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D DM42_1541 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D DM42_5514 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D DM42_447 mdcG; malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D DM42_3192 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D DM42_2145 isocitrate dehydrogenase kinase/phosphatase family protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D DM42_2276 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D DM42_947 stf0 sulfotransferase family protein K21014 stf0; trehalose 2-sulfotransferase [EC:2.8.2.37] D DM42_6415 coA-transferase III family protein K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D DM42_3276 coA-transferase III family protein K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D DM42_3513 coA-transferase III family protein K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D DM42_5062 alpha/beta hydrolase fold family protein K03928 yvaK; carboxylesterase [EC:3.1.1.1] D DM42_2217 macro domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D DM42_5632 alpha/beta hydrolase fold family protein K19311 lipV; lipase [EC:3.1.1.-] D DM42_5699 hypothetical protein K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33] D DM42_237 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D DM42_1025 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D DM42_287 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D DM42_2988 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D DM42_410 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D DM42_5021 EAL domain protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D DM42_5677 betC; choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D DM42_3210 hydrolase, TatD family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D DM42_2976 tatD related DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D DM42_319 glycosyl hydrolases 8 family protein K20542 bcsZ; endoglucanase [EC:3.2.1.4] D DM42_3396 phage lysozyme family protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D DM42_6825 glycosyl hydrolase 53 family protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D DM42_2333 amidohydrolase family protein K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D DM42_5732 dan; D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D DM42_1883 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D DM42_3075 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D DM42_329 ramA; (R)-stereoselective amidase K18540 ramA; (R)-amidase [EC:3.5.1.100] D DM42_2305 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D DM42_3425 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D DM42_1097 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D DM42_3141 amidohydrolase family protein K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D DM42_6008 endoribonuclease L-PSP family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D DM42_1313 CYTH domain protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D DM42_4600 copper-translocating P-type ATPase K19597 golT; Au+-exporting ATPase [EC:3.6.1.-] D DM42_709 maf; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D DM42_4463 low molecular weight phosphotyrosine phosphatase family protein K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D DM42_4454 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D DM42_8 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D DM42_293 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D DM42_2105 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D DM42_4986 amidohydrolase family protein K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52] D DM42_449 mdcD; malonate decarboxylase, beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D DM42_448 mdcE; malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D DM42_5591 hypothetical protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D DM42_904 hypothetical protein K22209 tarD; D(-)-tartrate dehydratase [EC:4.2.1.81] D DM42_3184 hydroxyethylthiazole kinase family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D DM42_5202 diaminopropionate ammonia-lyase family protein K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D DM42_6430 diaminopropionate ammonia-lyase family protein K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D DM42_6467 pyridoxal-phosphate dependent enzyme family protein K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D DM42_6369 srr; serine racemase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D DM42_6464 megL; methionine gamma-lyase K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43] D DM42_5465 hypothetical protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D DM42_5589 xylose isomerase-like TIM barrel family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D DM42_5197 AMP-binding enzyme family protein K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D DM42_1663 AMP-binding enzyme family protein K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D DM42_5115 bacteriocin biosynthesis cyclodehydratase domain protein K24411 patD; oxazoline/thiazoline synthase [EC:6.2.2.2 6.2.2.3] D DM42_6946 AMP-binding enzyme family protein K03397 E6.3.2.20; indoleacetate---lysine synthetase [EC:6.3.2.20] D DM42_1232 mpl; L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D DM42_2732 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D DM42_595 copper-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D DM42_1653 copper-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D DM42_6204 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D DM42_273 xylose isomerase-like TIM barrel family protein K06605 iolH; myo-inositol catabolism protein IolH D DM42_2320 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D DM42_2957 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D DM42_2318 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D DM42_2958 4Fe-4S binding domain protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D DM42_2319 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG D DM42_724 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D DM42_2355 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D DM42_7186 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D DM42_726 4Fe-4S binding domain protein K05524 fdxA; ferredoxin D DM42_2963 iscU; FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D DM42_7415 nifQ family protein K15790 nifQ; nitrogen fixation protein NifQ D DM42_6863 CitB domain protein K13795 citB; citrate/tricarballylate utilization protein D DM42_6864 FAD dependent oxidoreductase family protein K13796 cobZ; tricarballylate dehydrogenase D DM42_4825 cytochrome b562 family protein K15536 cybC; soluble cytochrome b562 D DM42_3776 von Willebrand factor type A domain protein K02448 norD; nitric oxide reductase NorD protein D DM42_3775 AAA domain family protein K04748 norQ; nitric oxide reductase NorQ protein D DM42_2060 electron transfer flavodomain protein K03521 fixA; electron transfer flavoprotein beta subunit D DM42_765 electron transfer flavodomain protein K03521 fixA; electron transfer flavoprotein beta subunit D DM42_6351 electron transfer flavodomain protein K03521 fixA; electron transfer flavoprotein beta subunit D DM42_3143 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism D DM42_1662 hypothetical protein K09456 aidB; putative acyl-CoA dehydrogenase D DM42_1215 putative phosphoserine phosphatase K21830 pchP; phosphorylcholine phosphatase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D DM42_1802 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K08234 yaeR; glyoxylase I family protein D DM42_1108 hypothetical protein K06997 yggS; PLP dependent protein D DM42_5926 acetyltransferase domain protein K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D DM42_778 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D DM42_777 tetratricopeptide repeat family protein K19804 lapB; lipopolysaccharide assembly protein B D DM42_5568 hypothetical protein K21687 rpfA; resuscitation-promoting factor RpfA D DM42_3545 glycosyltransferase 25 family protein K07270 K07270; glycosyl transferase, family 25 D DM42_320 bacterial cellulose synthase subunit K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D DM42_40 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW D DM42_2650 tetratricopeptide repeat family protein K02498 hemY; HemY protein D DM42_2343 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D DM42_2342 SCP-2 sterol transfer family protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D DM42_2202 membrane fusogenic activity family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D DM42_37 von Willebrand factor type A domain protein K13580 K13580; magnesium chelatase subunit ChlD-like protein C 99988 Secondary metabolism D DM42_5148 NADPH-dependent FMN reductase family protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D DM42_4398 NADPH-dependent FMN reductase family protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D DM42_7353 rieske [2Fe-2S] domain protein K22895 cruH; renierapurpurin 18,18'-hydroxylase C 99999 Others D DM42_2624 doxX-like family protein K15977 K15977; putative oxidoreductase D DM42_483 yqjF; inner membrane protein yqjF K15977 K15977; putative oxidoreductase D DM42_6216 yphA; inner membrane protein yphA K15977 K15977; putative oxidoreductase D DM42_7228 doxX family protein K15977 K15977; putative oxidoreductase D DM42_5466 yphA; inner membrane protein yphA K15977 K15977; putative oxidoreductase D DM42_3899 phospholipase/Carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase D DM42_5274 acetyltransferase family protein K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D DM42_5061 barstar family protein K03623 yhcO; ribonuclease inhibitor D DM42_6140 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein D DM42_2547 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein D DM42_1339 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein D DM42_828 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein D DM42_6339 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein D DM42_2203 nitrogen regulatory P-II family protein K04752 glnK; nitrogen regulatory protein P-II 2 D DM42_3304 S1 RNA binding domain protein K06959 tex; protein Tex C 99974 Translation D DM42_4855 ccmA; heme ABC exporter, ATP-binding protein CcmA K13926 rbbA; ribosome-dependent ATPase D DM42_4863 metallo-beta-lactamase superfamily protein K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D DM42_2548 ATP-dependent Clp protease adaptor ClpS family protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D DM42_3174 tig; trigger factor K03545 tig; trigger factor D DM42_1437 ferric reductase like transmembrane component family protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D DM42_4066 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D DM42_929 hypothetical protein K03187 ureE; urease accessory protein D DM42_930 ureF family protein K03188 ureF; urease accessory protein D DM42_931 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D DM42_925 ureD urease accessory family protein K03190 ureD; urease accessory protein D DM42_3099 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D DM42_2201 sigma-54 interaction domain protein K07391 comM; magnesium chelatase family protein D DM42_4253 osmC-like family protein K07397 yhfA; putative redox protein D DM42_310 osmC-like family protein K07397 yhfA; putative redox protein D DM42_1165 osmC-like family protein K07397 yhfA; putative redox protein D DM42_1440 resB-like family protein K07399 resB; cytochrome c biogenesis protein D DM42_1952 xdhC and CoxI family protein K07402 xdhC; xanthine dehydrogenase accessory factor D DM42_809 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D DM42_996 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D DM42_5796 hypothetical protein K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D DM42_2566 DNA repair RadC family protein K03630 radC; DNA repair protein RadC D DM42_647 radC-like JAB domain protein K03630 radC; DNA repair protein RadC D DM42_2093 DNA repair RadC family protein K03630 radC; DNA repair protein RadC D DM42_721 rmuC family protein K09760 rmuC; DNA recombination protein RmuC D DM42_625 AAA ATPase domain protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D DM42_6425 AAA domain protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D DM42_1539 hypothetical protein K07460 yraN; putative endonuclease D DM42_2659 GIY-YIG catalytic domain protein K07461 K07461; putative endonuclease D DM42_1882 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein D DM42_863 sigma-54 interaction domain protein K07478 ycaJ; putative ATPase D DM42_659 AAA domain family protein K07478 ycaJ; putative ATPase D DM42_4810 hypothetical protein K06919 K06919; putative DNA primase/helicase D DM42_3281 DNA polymerase family B, exonuclease domain protein K07501 K07501; 3'-5' exonuclease D DM42_4981 helix-turn-helix domain protein K07483 K07483; transposase D DM42_6660 AT hook motif family protein K07483 K07483; transposase D DM42_2432 AT hook motif family protein K07483 K07483; transposase D DM42_196 helix-turn-helix domain protein K07483 K07483; transposase D DM42_3303 helix-turn-helix domain protein K07483 K07483; transposase D DM42_2651 helix-turn-helix domain protein K07483 K07483; transposase D DM42_2064 transposase family protein K07483 K07483; transposase D DM42_2054 putative transposase K07484 K07484; transposase D DM42_2055 transposase IS66 family protein K07484 K07484; transposase D DM42_5270 transposase family protein K07486 K07486; transposase D DM42_1659 transposase family protein K07486 K07486; transposase D DM42_1420 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase D DM42_206 hypothetical protein K07492 K07492; putative transposase D DM42_6479 transposase, Mutator family protein K07493 K07493; putative transposase D DM42_5860 transposase, Mutator family protein K07493 K07493; putative transposase D DM42_6927 transposase, Mutator family protein K07493 K07493; putative transposase D DM42_6939 transposase, Mutator family protein K07493 K07493; putative transposase D DM42_543 transposase, Mutator family protein K07493 K07493; putative transposase D DM42_3636 transposase, Mutator family protein K07493 K07493; putative transposase D DM42_1658 transposase, Mutator family protein K07493 K07493; putative transposase D DM42_195 integrase core domain protein K07497 K07497; putative transposase D DM42_3302 integrase core domain protein K07497 K07497; putative transposase D DM42_2652 integrase core domain protein K07497 K07497; putative transposase D DM42_6521 integrase core domain protein K07497 K07497; putative transposase D DM42_2431 integrase core domain protein K07497 K07497; putative transposase D DM42_4982 integrase core domain protein K07497 K07497; putative transposase D DM42_6661 integrase core domain protein K07497 K07497; putative transposase D DM42_392 integrase core domain protein K07497 K07497; putative transposase D DM42_2065 integrase core domain protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D DM42_3148 pspA/IM30 family protein K03969 pspA; phage shock protein A D DM42_3274 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D DM42_6976 gram-negative porin family protein K03285 TC.GBP; general bacterial porin, GBP family D DM42_830 gram-negative porin family protein K03285 TC.GBP; general bacterial porin, GBP family D DM42_4330 gram-negative porin family protein K03285 TC.GBP; general bacterial porin, GBP family D DM42_3538 gram-negative porin family protein K03285 TC.GBP; general bacterial porin, GBP family D DM42_3630 gram-negative porin family protein K03285 TC.GBP; general bacterial porin, GBP family D DM42_5519 gram-negative porin family protein K03285 TC.GBP; general bacterial porin, GBP family D DM42_3591 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family D DM42_2550 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family D DM42_1953 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D DM42_3483 RND transporter, hydrophobe/amphiphile efflux-1 family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D DM42_332 citN; citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D DM42_30 citN; citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D DM42_5254 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D DM42_3233 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family D DM42_5490 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family D DM42_6568 solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D DM42_2721 putative membrane protein K03307 TC.SSS; solute:Na+ symporter, SSS family D DM42_6755 dicarboxylate symporter family protein K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family D DM42_1417 agcS; amino acid carrier family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D DM42_6781 putative membrane protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D DM42_471 permease for cytosine/purine, uracil, thiamine, allantoin family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D DM42_3128 permease for cytosine/purine, uracil, thiamine, allantoin family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D DM42_3956 permease for cytosine/purine, uracil, thiamine, allantoin family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D DM42_7358 ncs1; NCS1 nucleoside transporter family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D DM42_7356 na+ dependent nucleoside transporter family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family D DM42_936 polysaccharide biosynthesis family protein K03328 TC.PST; polysaccharide transporter, PST family C 99978 Cell growth D DM42_3190 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein D DM42_83 spoVR like family protein K06415 spoVR; stage V sporulation protein R C 99993 Cell motility D DM42_5848 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins D DM42_6254 hypothetical protein K15540 ecpD; chaperone protein EcpD C 99995 Signaling proteins D DM42_2892 terD domain protein K05795 terD; tellurium resistance protein TerD D DM42_7413 proQ/FINO family protein K03607 proQ; ProP effector D DM42_5236 carbon starvation CstA family protein K06200 cstA; carbon starvation protein D DM42_190 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D DM42_6226 CBS domain protein K07168 K07168; CBS domain-containing membrane protein D DM42_2378 phoH-like family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D DM42_3235 phoH-like family protein K07175 phoH2; PhoH-like ATPase D DM42_85 hypothetical protein K07180 prkA; serine protein kinase D DM42_2513 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D DM42_864 outer membrane lipocarrier LolA family protein K03634 lolA; outer membrane lipoprotein carrier protein D DM42_2270 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D DM42_1404 vacJ like lipofamily protein K04754 mlaA; phospholipid-binding lipoprotein MlaA D DM42_5159 vacJ like lipofamily protein K04754 mlaA; phospholipid-binding lipoprotein MlaA D DM42_1242 glycine zipper 2TM domain protein K06077 slyB; outer membrane lipoprotein SlyB D DM42_3088 outer membrane family protein K06142 hlpA; outer membrane protein D DM42_6170 lysM domain protein K06194 nlpD; lipoprotein NlpD D DM42_3279 lysM domain protein K06194 nlpD; lipoprotein NlpD D DM42_4142 lysM domain protein K06194 nlpD; lipoprotein NlpD D DM42_1052 capsule polysaccharide biosynthesis family protein K07265 kpsS; capsular polysaccharide export protein D DM42_1067 capsule polysaccharide biosynthesis family protein K07266 kpsC; capsular polysaccharide export protein D DM42_1421 ompW family protein K07275 ompW; outer membrane protein D DM42_5644 ompW family protein K07275 ompW; outer membrane protein D DM42_3432 hypothetical protein K07275 ompW; outer membrane protein D DM42_1518 ompW family protein K07275 ompW; outer membrane protein D DM42_5073 ompW family protein K07275 ompW; outer membrane protein D DM42_3416 asmA family protein K07290 yhjG; AsmA family protein D DM42_4854 efflux transporter, RND family, MFP subunit K01993 ABC-2.TX; HlyD family secretion protein D DM42_4860 hlyD secretion family protein K02005 ABC.CD.TX; HlyD family secretion protein D DM42_1525 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D DM42_294 glycine zipper 2TM domain protein K04062 osmB; osmotically inducible lipoprotein OsmB D DM42_500 glycine zipper 2TM domain protein K04062 osmB; osmotically inducible lipoprotein OsmB D DM42_3677 putative osmotically-inducible lipoprotein OsmE K04064 osmE; osmotically inducible lipoprotein OsmE D DM42_6007 inner membrane CreD family protein K06143 creD; inner membrane protein D DM42_3287 helix-turn-helix domain protein K15539 rodZ; cytoskeleton protein RodZ D DM42_253 hypothetical protein K21695 aaeX; protein AaeX C 99994 Others D DM42_417 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D DM42_2869 BFD-like [2Fe-2S] binding domain protein K02192 bfd; bacterioferritin-associated ferredoxin D DM42_1445 cutA1 divalent ion tolerance family protein K03926 cutA; periplasmic divalent cation tolerance protein D DM42_2128 cutC family protein K06201 cutC; copper homeostasis protein D DM42_1306 apaG; protein ApaG K06195 apaG; ApaG protein D DM42_1435 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D DM42_7170 FAD binding domain protein K07222 K07222; putative flavoprotein involved in K+ transport D DM42_5347 hemin-degrading HemS.ChuX domain protein K07225 hmuS; putative hemin transport protein B B 09194 Poorly characterized C 99996 General function prediction only D DM42_4089 colicin V production family protein K03558 cvpA; membrane protein required for colicin V production D DM42_3999 chitinase class I family protein K03791 K03791; putative chitinase D DM42_1130 mce related family protein K06192 pqiB; paraquat-inducible protein B D DM42_5866 mce related family protein K06192 pqiB; paraquat-inducible protein B D DM42_569 acetyltransferase family protein K02348 elaA; ElaA protein D DM42_3746 putative acyltransferase-like protein K02348 elaA; ElaA protein D DM42_623 competence CoiA-like family protein K06198 coiA; competence protein CoiA D DM42_6353 bacterial transferase hexapeptide family protein K02617 paaY; phenylacetic acid degradation protein D DM42_4646 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein D DM42_991 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein D DM42_5043 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein D DM42_3584 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein D DM42_4426 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein D DM42_7125 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein D DM42_3835 helix-hairpin-helix domain protein K04477 ycdX; putative hydrolase D DM42_5624 pqqB; coenzyme PQQ biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D DM42_5626 pqqD; coenzyme PQQ biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D DM42_2783 bacterial-like globin family protein K06886 glbN; hemoglobin D DM42_3251 bacterial-like globin family protein K06886 glbN; hemoglobin D DM42_5822 surface antigen variable number repeat family protein K07001 K07001; NTE family protein D DM42_3996 patatin-like phospholipase family protein K07001 K07001; NTE family protein D DM42_5126 patatin-like phospholipase family protein K07001 K07001; NTE family protein D DM42_3035 patatin-like phospholipase family protein K07001 K07001; NTE family protein D DM42_2163 patatin-like phospholipase family protein K07001 K07001; NTE family protein D DM42_1161 iron-sulfur cluster assembly accessory family protein K15724 erpA; iron-sulfur cluster insertion protein D DM42_244 yihY; YihY family inner membrane domain protein K07058 K07058; membrane protein D DM42_4071 yihY; YihY family inner membrane domain protein K07058 K07058; membrane protein D DM42_443 phosphoribosyl transferase domain protein K07100 K07100; putative phosphoribosyl transferase D DM42_4909 phosphoribosyl transferase domain protein K07100 K07100; putative phosphoribosyl transferase D DM42_2744 rhodanese-like domain protein K07146 K07146; UPF0176 protein D DM42_2722 3-demethylubiquinone-9 3-methyltransferase family protein K04750 phnB; PhnB protein D DM42_115 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K04750 phnB; PhnB protein D DM42_6669 putative glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein D DM42_3540 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K04750 phnB; PhnB protein D DM42_5168 hypothetical protein K11477 glcG; glc operon protein GlcG D DM42_6495 hypothetical protein K11477 glcG; glc operon protein GlcG D DM42_4947 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D DM42_57 fhuF; siderophore-iron reductase FhuF K13255 fhuF; ferric iron reductase protein FhuF D DM42_568 cytochrome c oxidase caa3 assembly factor family protein K02351 K02351; putative membrane protein D DM42_729 creA family protein K05805 creA; CreA protein D DM42_4090 sporulation related domain protein K03749 dedD; DedD protein D DM42_1071 dedA; protein dedA K03975 dedA; membrane-associated protein D DM42_1128 paraquat-inducible A family protein K03808 pqiA; paraquat-inducible protein A D DM42_1129 paraquat-inducible A family protein K03808 pqiA; paraquat-inducible protein A D DM42_5867 paraquat-inducible A family protein K03808 pqiA; paraquat-inducible protein A D DM42_5868 paraquat-inducible A family protein K03808 pqiA; paraquat-inducible protein A D DM42_1555 hypothetical protein K08972 K08972; putative membrane protein D DM42_560 hypothetical protein K08983 K08983; putative membrane protein D DM42_5915 hypothetical protein K08989 K08989; putative membrane protein D DM42_3582 hypothetical protein K08995 K08995; putative membrane protein D DM42_7120 hypothetical protein K08995 K08995; putative membrane protein D DM42_5927 hypothetical protein K08995 K08995; putative membrane protein D DM42_2142 putative protein YchJ K09858 K09858; SEC-C motif domain protein D DM42_6678 hypothetical protein K11312 K11312; cupin 2 domain-containing protein D DM42_7158 phosphate-starvation-inducible E family protein K13256 psiE; protein PsiE D DM42_7019 phnA Zinc-Ribbon family protein K06193 phnA; protein PhnA C 99997 Function unknown D DM42_4156 ankyrin repeat family protein K06867 K06867; uncharacterized protein D DM42_5212 ankyrin repeats family protein K06867 K06867; uncharacterized protein D DM42_3211 ankyrin repeat family protein K06867 K06867; uncharacterized protein D DM42_7345 ankyrin repeat family protein K06867 K06867; uncharacterized protein D DM42_6555 prolyl oligopeptidase family protein K06889 K06889; uncharacterized protein D DM42_6664 alpha/beta hydrolase fold family protein K06889 K06889; uncharacterized protein D DM42_6494 dienelactone hydrolase family protein K06889 K06889; uncharacterized protein D DM42_1852 25-like lysozyme family protein K06903 W; Bacteriophage baseplate protein W D DM42_1605 25-like lysozyme family protein K06903 W; Bacteriophage baseplate protein W D DM42_1839 phage late control D family protein K06905 D; Bacteriophage probable baseplate hub protein D DM42_1616 phage late control D family protein K06905 D; Bacteriophage probable baseplate hub protein D DM42_1840 phage P2 GpU family protein K06906 gpU; phage tail protein D DM42_1615 phage P2 GpU family protein K06906 gpU; phage tail protein D DM42_1845 phage tail sheath family protein K06907 FI; Bacteriophage tail sheath protein D DM42_1610 phage tail sheath family protein K06907 FI; Bacteriophage tail sheath protein D DM42_1844 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein D DM42_1611 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein D DM42_1269 AAA ATPase domain protein K06923 K06923; uncharacterized protein D DM42_7290 hypothetical protein K06923 K06923; uncharacterized protein D DM42_6114 putative DNA-binding protein K06934 K06934; uncharacterized protein D DM42_3436 hypothetical protein K06938 K06938; uncharacterized protein D DM42_4715 hypothetical protein K06938 K06938; uncharacterized protein D DM42_2101 hypothetical protein K06938 K06938; uncharacterized protein D DM42_915 putative zinc-/iron-chelating domain protein K06940 K06940; uncharacterized protein D DM42_1247 hypothetical protein K06950 K06950; uncharacterized protein D DM42_6909 FAD dependent oxidoreductase family protein K06954 K06954; uncharacterized protein D DM42_5354 succinylglutamate desuccinylase / Aspartoacylase family protein K06987 K06987; uncharacterized protein D DM42_3530 succinylglutamate desuccinylase / Aspartoacylase family protein K06987 K06987; uncharacterized protein D DM42_5403 succinylglutamate desuccinylase / Aspartoacylase family protein K06987 K06987; uncharacterized protein D DM42_335 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K06991 K06991; uncharacterized protein D DM42_906 hypothetical protein K06995 K06995; uncharacterized protein D DM42_4732 cupin domain protein K06995 K06995; uncharacterized protein D DM42_1136 glyoxalase-like domain protein K06996 K06996; uncharacterized protein D DM42_1231 alpha/beta hydrolase family protein K07000 K07000; uncharacterized protein D DM42_5160 MMPL family protein K07003 K07003; uncharacterized protein D DM42_5886 acrB/AcrD/AcrF family protein K07003 K07003; uncharacterized protein D DM42_6337 MMPL family protein K07003 K07003; uncharacterized protein D DM42_4704 endonuclease/Exonuclease/phosphatase family protein K07004 K07004; uncharacterized protein D DM42_4165 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D DM42_4385 2Fe-2S iron-sulfur cluster binding domain protein K07006 K07006; uncharacterized protein D DM42_1642 hypothetical protein K07006 K07006; uncharacterized protein D DM42_1644 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein D DM42_2177 prolyl oligopeptidase family protein K07018 K07018; uncharacterized protein D DM42_2434 alpha/beta hydrolase fold family protein K07019 K07019; uncharacterized protein D DM42_4891 AAA domain protein K07028 K07028; uncharacterized protein D DM42_4899 hypothetical protein K07028 K07028; uncharacterized protein D DM42_4238 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K07032 K07032; uncharacterized protein D DM42_6134 putative metal-dependent hydrolase family protein K07044 K07044; uncharacterized protein D DM42_5791 putative metal-dependent hydrolase family protein K07044 K07044; uncharacterized protein D DM42_4216 putative metal-dependent hydrolase family protein K07044 K07044; uncharacterized protein D DM42_5724 amidohydrolase family protein K07045 K07045; uncharacterized protein D DM42_5725 amidohydrolase family protein K07045 K07045; uncharacterized protein D DM42_6020 neutral zinc metallopeptidase family protein K07054 K07054; uncharacterized protein D DM42_5332 NAD dependent epimerase/dehydratase family protein K07071 K07071; uncharacterized protein D DM42_4363 putative nucleotidyltransferase family protein K07074 K07074; uncharacterized protein D DM42_104 putative permease family protein K07089 K07089; uncharacterized protein D DM42_986 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D DM42_6165 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D DM42_3441 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D DM42_5851 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D DM42_6290 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D DM42_3911 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D DM42_520 hypothetical protein K07093 K07093; uncharacterized protein D DM42_6090 calcineurin-like phosphoesterase family protein K07098 K07098; uncharacterized protein D DM42_3300 phosphoribosyl transferase domain protein K07101 K07101; uncharacterized protein D DM42_3814 sulfur transport family protein K07112 K07112; uncharacterized protein D DM42_3815 sulfur transport family protein K07112 K07112; uncharacterized protein D DM42_1707 SET domain protein K07117 K07117; uncharacterized protein D DM42_515 NAD dependent epimerase/dehydratase family protein K07118 K07118; uncharacterized protein D DM42_3655 short chain dehydrogenase family protein K07124 K07124; uncharacterized protein D DM42_5993 sel1 repeat family protein K07126 K07126; uncharacterized protein D DM42_5028 sel1 repeat family protein K07126 K07126; uncharacterized protein D DM42_3838 sel1 repeat family protein K07126 K07126; uncharacterized protein D DM42_4770 sel1 repeat family protein K07126 K07126; uncharacterized protein D DM42_7314 sel1 repeat family protein K07126 K07126; uncharacterized protein D DM42_3001 hypothetical protein K07137 K07137; uncharacterized protein D DM42_3703 MOSC domain protein K07140 K07140; MOSC domain-containing protein D DM42_2274 ATP-dependent protease La domain protein K07157 K07157; uncharacterized protein D DM42_1789 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D DM42_2541 hypothetical protein K09005 K09005; uncharacterized protein D DM42_4171 yqey-like family protein K09117 K09117; uncharacterized protein D DM42_1523 thiS family protein K09122 K09122; uncharacterized protein D DM42_894 hypothetical protein K09137 K09137; uncharacterized protein D DM42_2180 hypothetical protein K09158 K09158; uncharacterized protein D DM42_2456 carbon monoxide dehydrogenase subunit G family protein K09386 K09386; uncharacterized protein D DM42_6910 hypothetical protein K09701 K09701; uncharacterized protein D DM42_3593 hypothetical protein K09705 K09705; uncharacterized protein D DM42_2779 hypothetical protein K09712 K09712; uncharacterized protein D DM42_36 hypothetical protein K09768 K09768; uncharacterized protein D DM42_3470 YCII-related domain protein K09780 K09780; uncharacterized protein D DM42_4686 YCII-related domain protein K09780 K09780; uncharacterized protein D DM42_84 hypothetical protein K09786 K09786; uncharacterized protein D DM42_2522 hypothetical protein K09791 K09791; uncharacterized protein D DM42_2891 integral membrane TerC family protein K09799 K09799; uncharacterized protein D DM42_3101 rnfH Ubiquitin family protein K09801 K09801; uncharacterized protein D DM42_1131 hypothetical protein K09857 K09857; uncharacterized protein D DM42_5865 hypothetical protein K09857 K09857; uncharacterized protein D DM42_2839 hypothetical protein K09861 K09861; uncharacterized protein D DM42_1267 hypothetical protein K09862 K09862; uncharacterized protein D DM42_5222 hypothetical protein K09915 K09915; uncharacterized protein D DM42_2662 acetyltransferase domain protein K09919 K09919; uncharacterized protein D DM42_1926 hypothetical protein K09921 K09921; uncharacterized protein D DM42_2759 hypothetical protein K09923 K09923; uncharacterized protein D DM42_786 hypothetical protein K09924 K09924; uncharacterized protein D DM42_5931 winged helix DNA-binding domain protein K09927 K09927; uncharacterized protein D DM42_3560 putative antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein D DM42_3297 hypothetical protein K09937 K09937; uncharacterized protein D DM42_1951 pepSY-associated TM helix family protein K09939 K09939; uncharacterized protein D DM42_1344 hypothetical protein K09941 K09941; uncharacterized protein D DM42_1347 hypothetical protein K09946 K09946; uncharacterized protein D DM42_6733 hypothetical protein K09954 K09954; uncharacterized protein D DM42_6133 glycolipid-binding family protein K09957 K09957; uncharacterized protein D DM42_3974 glycolipid-binding family protein K09957 K09957; uncharacterized protein D DM42_5132 hypothetical protein K09958 K09958; uncharacterized protein D DM42_3369 hypothetical protein K09960 K09960; uncharacterized protein D DM42_3366 hypothetical protein K09961 K09961; uncharacterized protein D DM42_3138 ACT domain protein K09964 K09964; uncharacterized protein D DM42_1530 hypothetical protein K09965 K09965; uncharacterized protein D DM42_6764 hypothetical protein K09967 K09967; uncharacterized protein D DM42_6765 hypothetical protein K09967 K09967; uncharacterized protein D DM42_1969 traB family protein K09973 K09973; uncharacterized protein D DM42_2918 hutD family protein K09975 K09975; uncharacterized protein D DM42_3057 hypothetical protein K09977 K09977; uncharacterized protein D DM42_459 hypothetical protein K09981 K09981; uncharacterized protein D DM42_883 hypothetical protein K09983 K09983; uncharacterized protein D DM42_35 hypothetical protein K09983 K09983; uncharacterized protein D DM42_2407 hypothetical protein K09984 K09984; uncharacterized protein D DM42_2725 VWA domain containing CoxE-like family protein K09989 K09989; uncharacterized protein D DM42_5489 oxygenase, catalysing oxidative methylation of damaged DNA family protein K09990 K09990; uncharacterized protein D DM42_4603 metal-sensitive transcriptional repressor family protein K07807 K07807; uncharacterized protein D DM42_3232 hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024