+D GENES KO
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KEGG Orthology (KO) - Baumannia cicadellinicola Hc (Homalodisca coagulata)
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bci00010]
D BCI_0012 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BCI_0171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BCI_0646 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BCI_0169 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BCI_0443 gapA; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BCI_0645 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BCI_0251 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BCI_0221 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BCI_0310 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BCI_0512 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D BCI_0511 aceF; pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BCI_0419 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BCI_0013 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:bci00020]
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BCI_0098 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D BCI_0097 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BCI_0420 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D BCI_0001 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D BCI_0013 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D BCI_0512 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D BCI_0511 aceF; pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D BCI_0419 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:bci00030]
D BCI_0012 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BCI_0309 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BCI_0244 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D BCI_0397 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BCI_0022 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BCI_0075 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BCI_0076 talB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D BCI_0647 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D BCI_0293 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BCI_0646 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BCI_0171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions
D BCI_0022 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:bci00051]
D BCI_0171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BCI_0646 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BCI_0169 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BCI_0451 PTS system, mannose/fructose/sorbose family, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D BCI_0450 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component
D BCI_0449 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism
D BCI_0171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism
D BCI_0012 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bci00520]
D BCI_0138 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BCI_0636 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D BCI_0139 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D BCI_0028 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BCI_0504 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BCI_0451 PTS system, mannose/fructose/sorbose family, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D BCI_0450 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component
D BCI_0449 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D BCI_0012 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:bci00620]
D BCI_0419 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BCI_0512 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D BCI_0511 aceF; pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BCI_0382 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BCI_0383 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BCI_0310 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BCI_0539 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BCI_0051 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BCI_0052 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BCI_0365 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BCI_0475 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D BCI_0406 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D BCI_0001 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D BCI_0420 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D BCI_0013 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bci00630]
D BCI_0004 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:bci00640]
D BCI_0382 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BCI_0383 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BCI_0539 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BCI_0051 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BCI_0052 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BCI_0365 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BCI_0097 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BCI_0098 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism
D BCI_0419 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00660 C5-Branched dibasic acid metabolism
D BCI_0097 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BCI_0098 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:bci00562]
D BCI_0005 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D BCI_0169 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bci00190]
D BCI_0381 nuoA; NADH-quinone oxidoreductase, subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D BCI_0380 nuoB; NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D BCI_0379 nuoCD; NADH-quinone oxidoreductase chain C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D BCI_0378 nuoE; NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D BCI_0377 nuoF; NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D BCI_0376 nuoG; NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D BCI_0375 nuoH; NADH-quinone oxidoreductase, chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D BCI_0374 nuoI; NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D BCI_0373 nuoJ; NADH-quinone oxidoreductase, chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D BCI_0372 nuoK; NADH-quinone oxidoreductase, chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D BCI_0371 nuoL; proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D BCI_0370 nuoM; proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D BCI_0369 nuoN; proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D BCI_0270 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D BCI_0269 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D BCI_0268 cyoB; ubiquinol oxidase, polypeptide I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D BCI_0267 cyoA; ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D BCI_0143 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BCI_0141 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BCI_0142 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BCI_0144 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BCI_0140 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BCI_0147 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BCI_0145 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BCI_0146 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BCI_0608 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D BCI_0074 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:bci00710]
D BCI_0645 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BCI_0443 gapA; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BCI_0646 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BCI_0075 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BCI_0647 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D BCI_0169 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BCI_0022 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BCI_0076 talB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D BCI_0013 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00720 Other carbon fixation pathways [PATH:bci00720]
D BCI_0419 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D BCI_0420 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D BCI_0098 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D BCI_0097 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BCI_0539 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BCI_0051 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BCI_0052 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BCI_0365 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BCI_0122 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BCI_0162 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D BCI_0383 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BCI_0382 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:bci00680]
D BCI_0004 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BCI_0221 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BCI_0646 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BCI_0171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BCI_0382 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D BCI_0383 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BCI_0251 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BCI_0252 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism [PATH:bci00920]
D BCI_0170 sulfate ABC transporter, sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D BCI_0077 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D BCI_0078 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D BCI_0079 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D BCI_0213 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BCI_0214 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D BCI_0212 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D BCI_0570 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D BCI_0216 cysH; phosophoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D BCI_0218 cysJ; sulfite reductase [NADPH] flavoprotein, alpha chain K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D BCI_0217 cysI; sulfite reductase (NADPH) hemoprotein, beta subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D BCI_0172 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BCI_0068 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D BCI_0019 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D BCI_0163 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bci00061]
D BCI_0539 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BCI_0051 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BCI_0052 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BCI_0365 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BCI_0433 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D BCI_0435 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BCI_0436 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BCI_0362 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D BCI_0434 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BCI_0410 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D BCI_0537 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BCI_0296 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:bci00074]
D BCI_0278 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D BCI_0433 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D BCI_0435 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bci00561]
D BCI_0020 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BCI_0624 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:bci00564]
D BCI_0173 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D BCI_0020 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BCI_0624 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BCI_0533 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D BCI_0025 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D BCI_0587 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D BCI_0240 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D BCI_0605 pgpA; phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D BCI_0305 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bci00230]
D BCI_0014 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D BCI_0293 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BCI_0368 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BCI_0036 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D BCI_0073 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D BCI_0002 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D BCI_0072 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D BCI_0119 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D BCI_0120 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D BCI_0071 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D BCI_0423 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BCI_0035 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BCI_0651 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BCI_0007 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BCI_0650 guaA; GMP synthetase, glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BCI_0110 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D BCI_0386 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BCI_0385 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BCI_0577 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BCI_0118 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BCI_0562 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D BCI_0212 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D BCI_0213 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BCI_0214 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:bci00240]
D BCI_0560 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BCI_0559 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BCI_0258 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D BCI_0259 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D BCI_0441 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D BCI_0409 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D BCI_0181 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D BCI_0298 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D BCI_0529 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D BCI_0007 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BCI_0222 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D BCI_0254 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D BCI_0395 dcd; 2-deoxycytidine 5-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D BCI_0386 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BCI_0385 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BCI_0431 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D BCI_0182 dut; deoxyuridine 5''-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BCI_0544 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bci00250]
D BCI_0407 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BCI_0614 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D BCI_0593 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D BCI_0577 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BCI_0423 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BCI_0258 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D BCI_0259 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D BCI_0560 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BCI_0559 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BCI_0138 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BCI_0368 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bci00260]
D BCI_0004 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BCI_0251 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BCI_0252 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BCI_0025 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
C 00270 Cysteine and methionine metabolism [PATH:bci00270]
D BCI_0172 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D BCI_0068 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D BCI_0540 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BCI_0017 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D BCI_0015 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BCI_0224 pfs; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D BCI_0019 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D BCI_0163 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D BCI_0201 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D BCI_0482 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D BCI_0407 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BCI_0252 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bci00280]
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:bci00300]
D BCI_0125 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BCI_0523 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BCI_0522 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:bci00220]
D BCI_0560 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BCI_0559 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D BCI_0407 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism
D BCI_0407 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:bci00340]
D BCI_0405 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D BCI_0398 hisI; phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D BCI_0400 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D BCI_0401 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D BCI_0399 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D BCI_0402 hisB; histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D BCI_0403 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BCI_0404 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:bci00350]
D BCI_0407 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BCI_0403 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:bci00360]
D BCI_0407 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BCI_0403 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bci00400]
D BCI_0191 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D BCI_0023 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D BCI_0050 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D BCI_0418 aroE; dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D BCI_0024 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D BCI_0253 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D BCI_0361 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D BCI_0407 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BCI_0403 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D BCI_0231 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:bci00430]
D BCI_0383 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D BCI_0382 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:bci00450]
D BCI_0163 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D BCI_0540 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D BCI_0017 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D BCI_0462 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D BCI_0321 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BCI_0213 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BCI_0214 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D BCI_0396 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D BCI_0004 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bci00470]
D BCI_0388 ddlA; D-ala D-ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BCI_0153 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BCI_0520 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BCI_0125 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism [PATH:bci00480]
D BCI_0201 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D BCI_0482 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D BCI_0287 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D BCI_0397 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D BCI_0309 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
D BCI_0139 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:bci00550]
D BCI_0028 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BCI_0504 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BCI_0518 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BCI_0520 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BCI_0523 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BCI_0388 ddlA; D-ala D-ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BCI_0522 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BCI_0532 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BCI_0621 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BCI_0521 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BCI_0519 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BCI_0235 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BCI_0641 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:bci00552]
D BCI_0621 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bci00543]
D BCI_0172 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bci00730]
D BCI_0041 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D BCI_0649 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D BCI_0043 thiF; 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate synthesis protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D BCI_0006 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BCI_0046 thiH; thiH protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D BCI_0275 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BCI_0045 thiG; thiamine biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D BCI_0042 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D BCI_0604 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D BCI_0118 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:bci00740]
D BCI_0300 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D BCI_0601 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D BCI_0126 haloacid dehalogenase-like hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D BCI_0623 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D BCI_0602 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D BCI_0087 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D BCI_0555 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D BCI_0060 ubiB; ferrisiderophore reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
C 00750 Vitamin B6 metabolism [PATH:bci00750]
D BCI_0082 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D BCI_0363 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D BCI_0252 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BCI_0564 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D BCI_0279 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bci00760]
D BCI_0614 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D BCI_0102 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D BCI_0513 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D BCI_0234 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D BCI_0288 nadE; NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D BCI_0611 nadK; ATP-dependent NAD Kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:bci00770]
D BCI_0230 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D BCI_0272 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D BCI_0231 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D BCI_0359 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D BCI_0183 dfp; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D BCI_0176 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D BCI_0514 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D BCI_0278 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:bci00780]
D BCI_0248 bioC; biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D BCI_0362 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D BCI_0434 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BCI_0537 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BCI_0296 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BCI_0485 bioH; bioH protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D BCI_0247 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D BCI_0245 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D BCI_0249 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D BCI_0246 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D BCI_0505 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bci00785]
D BCI_0237 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D BCI_0238 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BCI_0512 aceE; pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D BCI_0511 aceF; pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:bci00790]
D BCI_0394 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D BCI_0620 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D BCI_0229 folK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokina se K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D BCI_0637 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D BCI_0561 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BCI_0366 folC; dihydrofolate:folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D BCI_0300 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D BCI_0549 pabA; Para-aminobenzoate synthase, glutamine amidotransferase component K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D BCI_0453 pabB; para-aminobenzoate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D BCI_0432 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D BCI_0219 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D BCI_0220 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D BCI_0262 exsB; exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D BCI_0525 GTP cyclohydrolase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:bci00670]
D BCI_0561 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BCI_0122 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BCI_0004 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BCI_0073 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D BCI_0035 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BCI_0415 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BCI_0544 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D BCI_0162 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D BCI_0648 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bci00860]
D BCI_0456 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BCI_0061 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D BCI_0062 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D BCI_0215 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D BCI_0270 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bci00900]
D BCI_0275 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D BCI_0531 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D BCI_0211 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D BCI_0292 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D BCI_0210 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D BCI_0008 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D BCI_0558 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D BCI_0274 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D BCI_0532 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D BCI_0075 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
D BCI_0213 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D BCI_0214 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D BCI_0005 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:bci00401]
D BCI_0407 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BCI_0403 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D BCI_0435 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BCI_0434 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BCI_0296 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D BCI_0433 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bci00999]
D BCI_0015 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BCI_0418 aroE; dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bci03020]
D BCI_0502 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BCI_0503 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BCI_0353 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BCI_0111 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bci03010]
D BCI_0255 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BCI_0527 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BCI_0334 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BCI_0352 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BCI_0345 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BCI_0574 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BCI_0493 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BCI_0342 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BCI_0032 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BCI_0327 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BCI_0351 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BCI_0492 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BCI_0350 rpsM; ribosomal protein S13p K02952 RP-S13; small subunit ribosomal protein S13
D BCI_0341 rpsN; ribosomal protein S14p K02954 RP-S14; small subunit ribosomal protein S14
D BCI_0628 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BCI_0198 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BCI_0337 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BCI_0572 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BCI_0332 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BCI_0554 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BCI_0618 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BCI_0499 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BCI_0331 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BCI_0328 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BCI_0329 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BCI_0340 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BCI_0343 rp1F; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BCI_0501 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BCI_0571 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BCI_0500 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BCI_0498 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BCI_0031 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BCI_0338 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BCI_0347 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BCI_0335 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BCI_0354 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BCI_0344 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BCI_0195 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BCI_0469 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BCI_0644 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BCI_0333 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BCI_0330 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BCI_0339 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BCI_0390 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D BCI_0643 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BCI_0179 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BCI_0336 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BCI_0346 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BCI_0165 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BCI_0438 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BCI_0178 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BCI_0133 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BCI_0470 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BCI_0349 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BCI_0154 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BCI_0509 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BCI_0156 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BCI_0507 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BCI_0506 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BCI_0157 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bci00970]
D BCI_0487 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BCI_0455 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BCI_0187 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BCI_0123 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BCI_0202 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BCI_0551 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BCI_0421 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BCI_0158 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BCI_0242 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BCI_0090 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BCI_0092 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BCI_0155 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BCI_0508 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BCI_0241 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BCI_0356 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BCI_0186 tRNA-His K14226 tRNA-His; tRNA His
D BCI_0486 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BCI_0634 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BCI_0610 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BCI_0093 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BCI_0185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BCI_0243 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BCI_0458 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BCI_0091 tRNA-Met K14230 tRNA-Met; tRNA Met
D BCI_0615 tRNA-Met K14230 tRNA-Met; tRNA Met
D BCI_0633 tRNA-Met K14230 tRNA-Met; tRNA Met
D BCI_0594 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BCI_0184 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BCI_0389 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BCI_0203 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BCI_0317 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BCI_0414 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BCI_0358 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BCI_0355 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BCI_0284 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BCI_0159 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BCI_0357 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BCI_0457 tRNA-Val K14237 tRNA-Val; tRNA Val
D BCI_0088 tRNA-Val K14237 tRNA-Val; tRNA Val
D BCI_0456 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BCI_0094 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BCI_0205 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BCI_0315 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BCI_0408 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BCI_0161 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D BCI_0160 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D BCI_0472 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BCI_0318 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BCI_0121 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BCI_0396 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BCI_0415 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BCI_0285 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BCI_0232 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BCI_0556 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BCI_0152 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BCI_0276 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BCI_0609 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BCI_0009 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BCI_0468 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BCI_0467 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BCI_0081 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BCI_0021 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bci03060]
D BCI_0348 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D BCI_0496 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D BCI_0635 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D BCI_0599 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D BCI_0600 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D BCI_0598 Preprotein translocase YajC K03210 yajC; preprotein translocase subunit YajC
D BCI_0136 inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BCI_0199 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BCI_0056 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BCI_0282 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BCI_0557 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bci04122]
D BCI_0006 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BCI_0491 dsrH; intracellular sulfur oxidation protein DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D BCI_0490 dsrF; intracellular reduction protein DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D BCI_0489 dsrE; intracellular sulfur reduction protein DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D BCI_0413 dsvC; dissimilatory sulfite reductase, gamma subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D BCI_0422 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BCI_0044 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D BCI_0043 thiF; 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate synthesis protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bci03018]
D BCI_0542 nudH; (Di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D BCI_0440 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D BCI_0221 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BCI_0627 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BCI_0576 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D BCI_0626 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BCI_0188 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BCI_0171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BCI_0552 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BCI_0591 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BCI_0581 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D BCI_0074 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D BCI_0228 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bci03030]
D BCI_0473 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BCI_0538 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BCI_0115 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BCI_0430 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BCI_0233 holA; DNA-directed DNA polymerase delta chain K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BCI_0625 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D BCI_0286 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D BCI_0132 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BCI_0550 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BCI_0617 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BCI_0107 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BCI_0474 rnhA; RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BCI_0066 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bci03410]
D BCI_0613 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BCI_0177 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D BCI_0392 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D BCI_0150 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BCI_0066 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bci03420]
D BCI_0127 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BCI_0066 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bci03430]
D BCI_0209 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D BCI_0584 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D BCI_0541 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D BCI_0127 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BCI_0150 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BCI_0107 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BCI_0538 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BCI_0132 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BCI_0115 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BCI_0233 holA; DNA-directed DNA polymerase delta chain K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BCI_0430 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BCI_0473 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BCI_0286 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D BCI_0625 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D BCI_0066 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bci03440]
D BCI_0150 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BCI_0107 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BCI_0206 recA; recA protein K03553 recA; recombination protein RecA
D BCI_0313 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D BCI_0312 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BCI_0314 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BCI_0112 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BCI_0546 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D BCI_0545 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D BCI_0547 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D BCI_0538 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BCI_0132 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BCI_0115 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BCI_0233 holA; DNA-directed DNA polymerase delta chain K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BCI_0430 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BCI_0473 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BCI_0286 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D BCI_0625 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D BCI_0166 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D BCI_0573 priN; primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bci02010]
D BCI_0170 sulfate ABC transporter, sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D BCI_0077 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D BCI_0078 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D BCI_0079 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D BCI_0324 artI; arginine ABC-transporter, arginine binding protein K09997 artI; arginine transport system substrate-binding protein
D BCI_0326 artM; arginine ABC transporter, permease protein K09998 artM; arginine transport system permease protein
D BCI_0325 artQ; arginine ABC transporter, permease protein K09999 artQ; arginine transport system permease protein
D BCI_0323 artP; arginine ABC transporter, ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D BCI_0207 amino acid ABC transporter, periplasmic amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D BCI_0208 amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D BCI_0250 ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D BCI_0426 lolC; lipoprotein releasing system, transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D BCI_0424 lolE; lipoprotein releasing system, transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D BCI_0425 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BCI_0058 ftsX; protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D BCI_0057 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS) [PATH:bci02060]
D BCI_0070 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D BCI_0069 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D BCI_0451 PTS system, mannose/fructose/sorbose family, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D BCI_0450 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component
D BCI_0449 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
C 03070 Bacterial secretion system [PATH:bci03070]
D BCI_0599 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D BCI_0600 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D BCI_0496 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D BCI_0635 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D BCI_0348 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D BCI_0598 Preprotein translocase YajC K03210 yajC; preprotein translocase subunit YajC
D BCI_0136 inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BCI_0056 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BCI_0199 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bci02020]
D BCI_0204 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D BCI_0548 crp; cAMP-regulatory protein crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bci02024]
D BCI_0581 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D BCI_0191 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D BCI_0548 crp; cAMP-regulatory protein crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BCI_0488 zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D BCI_0300 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D BCI_0601 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D BCI_0136 inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BCI_0496 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D BCI_0635 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D BCI_0348 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D BCI_0598 Preprotein translocase YajC K03210 yajC; preprotein translocase subunit YajC
D BCI_0056 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BCI_0199 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:bci02040]
D BCI_0207 amino acid ABC transporter, periplasmic amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D BCI_0616 rpoD; RNA polymerase, sigma 70 factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D BCI_0221 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D BCI_0235 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bci01502]
D BCI_0388 ddlA; D-ala D-ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BCI_0522 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BCI_0521 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BCI_0519 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bci01503]
D BCI_0585 N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BCI_0257 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bci01000]
C 01001 Protein kinases
C 01009 Protein phosphatases and associated proteins [BR:bci01009]
D BCI_0171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BCI_0117 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:bci01002]
D BCI_0557 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D BCI_0650 guaA; GMP synthetase, glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BCI_0391 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D BCI_0368 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BCI_0138 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BCI_0448 conserved hypothetical protein K19235 ybiS; L,D-transpeptidase YbiS
D BCI_0054 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D BCI_0287 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D BCI_0526 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D BCI_0638 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BCI_0307 htpX; heat shock protein, integral membrane protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D BCI_0534 protease EcfE K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D BCI_0029 degQ; serine protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D BCI_0641 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BCI_0265 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BCI_0263 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BCI_0411 conserved hypothetical protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D BCI_0282 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BCI_0442 sppA; signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D BCI_0167 hslV; ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D BCI_0578 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D BCI_0579 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bci01011]
D BCI_0028 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BCI_0504 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BCI_0518 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BCI_0520 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BCI_0523 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BCI_0388 ddlA; D-ala D-ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BCI_0153 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BCI_0521 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BCI_0519 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BCI_0621 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BCI_0277 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D BCI_0235 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BCI_0641 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BCI_0448 conserved hypothetical protein K19235 ybiS; L,D-transpeptidase YbiS
D BCI_0391 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D BCI_0477 mltC; membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D BCI_0585 N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BCI_0089 major outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:bci01004]
D BCI_0435 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BCI_0436 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BCI_0362 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D BCI_0434 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BCI_0410 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D BCI_0537 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BCI_0296 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BCI_0020 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BCI_0624 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:bci01006]
D BCI_0274 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D BCI_0532 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BCI_0583 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BCI_0270 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bci01007]
D BCI_0456 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BCI_0094 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BCI_0081 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BCI_0021 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BCI_0121 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BCI_0276 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BCI_0396 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BCI_0556 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BCI_0285 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BCI_0232 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BCI_0152 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BCI_0315 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BCI_0408 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BCI_0009 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BCI_0161 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D BCI_0160 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D BCI_0318 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BCI_0609 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BCI_0472 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BCI_0205 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BCI_0468 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BCI_0467 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BCI_0407 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D BCI_0403 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BCI_0247 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D BCI_0245 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D BCI_0252 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bci00194]
D BCI_0140 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BCI_0141 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BCI_0142 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BCI_0143 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BCI_0144 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BCI_0145 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BCI_0146 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BCI_0147 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bci03000]
D BCI_0016 metR; transcriptional regulator, MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D BCI_0301 cysB; cys regulon transcriptional activator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D BCI_0083 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D BCI_0488 zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D BCI_0548 crp; cAMP-regulatory protein crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BCI_0505 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D BCI_0481 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D BCI_0227 dksA; DnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:bci03021]
D BCI_0353 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BCI_0502 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BCI_0503 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BCI_0111 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BCI_0616 rpoD; RNA polymerase, sigma 70 factor K03086 rpoD; RNA polymerase primary sigma factor
D BCI_0059 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D BCI_0632 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D BCI_0603 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D BCI_0497 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D BCI_0227 dksA; DnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D BCI_0640 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D BCI_0188 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bci03019]
D BCI_0440 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D BCI_0281 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BCI_0576 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D BCI_0586 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D BCI_0626 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BCI_0221 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BCI_0627 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BCI_0188 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D BCI_0171 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BCI_0552 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BCI_0591 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BCI_0581 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D BCI_0074 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D BCI_0228 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D BCI_0542 nudH; (Di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D BCI_0204 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:bci03011]
D BCI_0255 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BCI_0527 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BCI_0334 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BCI_0352 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BCI_0345 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BCI_0574 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D BCI_0493 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BCI_0342 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BCI_0032 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BCI_0327 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BCI_0351 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BCI_0492 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BCI_0350 rpsM; ribosomal protein S13p K02952 RP-S13; small subunit ribosomal protein S13
D BCI_0341 rpsN; ribosomal protein S14p K02954 RP-S14; small subunit ribosomal protein S14
D BCI_0628 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BCI_0198 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BCI_0337 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BCI_0572 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D BCI_0332 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BCI_0554 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BCI_0618 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BCI_0499 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BCI_0331 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BCI_0328 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BCI_0329 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BCI_0340 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BCI_0343 rp1F; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BCI_0571 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BCI_0500 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BCI_0498 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BCI_0501 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BCI_0031 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BCI_0338 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BCI_0347 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BCI_0335 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BCI_0354 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BCI_0344 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BCI_0195 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BCI_0469 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BCI_0644 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BCI_0333 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BCI_0330 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BCI_0339 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BCI_0643 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BCI_0179 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BCI_0336 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BCI_0346 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BCI_0165 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D BCI_0438 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BCI_0178 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BCI_0133 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BCI_0470 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BCI_0349 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BCI_0390 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D BCI_0506 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BCI_0157 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BCI_0154 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BCI_0509 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BCI_0156 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BCI_0507 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bci03009]
D BCI_0281 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BCI_0586 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D BCI_0280 era; GTP-binding protein Era K03595 era; GTPase
D BCI_0642 GTP1/Obg family protein K03979 obgE; GTPase [EC:3.6.5.-]
D BCI_0227 dksA; DnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D BCI_0632 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D BCI_0603 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D BCI_0497 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D BCI_0563 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BCI_0524 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BCI_0575 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BCI_0639 rrmJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D BCI_0439 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D BCI_0193 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BCI_0197 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D BCI_0360 prmB; protein-(glutamine-N5) methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D BCI_0440 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D BCI_0626 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BCI_0011 engA; GTP-binding protein EngA K03977 engA; GTPase
D BCI_0580 hflX; GTP-binding protein hflX K03665 hflX; GTPase
D BCI_0417 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BCI_0630 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D BCI_0064 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D BCI_0295 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:bci03016]
D BCI_0622 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D BCI_0456 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BCI_0609 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BCI_0556 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BCI_0232 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BCI_0396 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BCI_0094 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BCI_0276 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BCI_0152 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D BCI_0315 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BCI_0205 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BCI_0408 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BCI_0472 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BCI_0318 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BCI_0121 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BCI_0285 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BCI_0009 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BCI_0468 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BCI_0467 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BCI_0081 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BCI_0021 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BCI_0428 Hit family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BCI_0364 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BCI_0629 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D BCI_0006 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BCI_0417 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BCI_0583 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BCI_0137 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D BCI_0148 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BCI_0570 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D BCI_0134 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D BCI_0085 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D BCI_0297 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D BCI_0161 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D BCI_0160 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D BCI_0003 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D BCI_0065 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D BCI_0196 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D BCI_0422 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BCI_0491 dsrH; intracellular sulfur oxidation protein DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D BCI_0490 dsrF; intracellular reduction protein DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D BCI_0489 dsrE; intracellular sulfur reduction protein DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D BCI_0413 dsvC; dissimilatory sulfite reductase, gamma subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D BCI_0149 gcvT; glycine cleavage T-protein K06980 ygfZ; tRNA-modifying protein YgfZ
D BCI_0596 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D BCI_0262 exsB; exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D BCI_0219 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D BCI_0220 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D BCI_0525 GTP cyclohydrolase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D BCI_0597 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D BCI_0103 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D BCI_0447 glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D BCI_0619 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D BCI_0576 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D BCI_0627 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bci03012]
D BCI_0631 infB; translation initiation factor IF2-2 K02519 infB; translation initiation factor IF-2
D BCI_0471 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BCI_0528 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D BCI_0495 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D BCI_0494 fusA; translation elongation factor G K02355 fusA; elongation factor G
D BCI_0290 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D BCI_0530 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D BCI_0289 hemK; protein methyltranferase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D BCI_0294 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D BCI_0322 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D BCI_0589 efp; translation elongation factor P K02356 efp; elongation factor P
D BCI_0588 lysyl-tRNA synthetase-like GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D BCI_0590 YodO family protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
C 03110 Chaperones and folding catalysts [BR:bci03110]
D BCI_0194 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D BCI_0264 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D BCI_0168 hslU; heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D BCI_0117 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D BCI_0552 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BCI_0591 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BCI_0553 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D BCI_0612 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D BCI_0037 heat shock protein K04080 ibpA; molecular chaperone IbpA
D BCI_0592 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D BCI_0638 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BCI_0147 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BCI_0565 surA; peptidylprolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D BCI_0189 trxA; thioredoxin 1 K03671 TXN; thioredoxin
D BCI_0086 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D BCI_0257 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
C 04131 Membrane trafficking [BR:bci04131]
D BCI_0007 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BCI_0443 gapA; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BCI_0251 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BCI_0310 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BCI_0117 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:bci04121]
C 03051 Proteasome [BR:bci03051]
D BCI_0117 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:bci03032]
D BCI_0474 rnhA; RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BCI_0040 hup; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D BCI_0550 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BCI_0617 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BCI_0107 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BCI_0538 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BCI_0132 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BCI_0286 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D BCI_0233 holA; DNA-directed DNA polymerase delta chain K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BCI_0430 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BCI_0473 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BCI_0115 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BCI_0625 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D BCI_0066 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BCI_0387 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BCI_0131 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BCI_0302 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bci03036]
D BCI_0281 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BCI_0306 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D BCI_0040 hup; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D BCI_0412 conserved hypothetical protein K11940 hspQ; heat shock protein HspQ
D BCI_0581 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D BCI_0057 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D BCI_0320 ftsK; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D BCI_0058 ftsX; protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D BCI_0517 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BCI_0067 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D BCI_0585 N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D BCI_0444 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D BCI_0445 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D BCI_0446 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D BCI_0049 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D BCI_0048 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D BCI_0047 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D BCI_0236 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D BCI_0148 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BCI_0113 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:bci03400]
D BCI_0613 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BCI_0182 dut; deoxyuridine 5''-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BCI_0177 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D BCI_0392 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D BCI_0150 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BCI_0066 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BCI_0127 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BCI_0502 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BCI_0503 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BCI_0353 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BCI_0111 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BCI_0209 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D BCI_0584 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D BCI_0541 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D BCI_0538 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BCI_0132 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BCI_0286 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D BCI_0233 holA; DNA-directed DNA polymerase delta chain K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D BCI_0430 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BCI_0473 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BCI_0115 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BCI_0625 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D BCI_0107 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BCI_0546 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D BCI_0545 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D BCI_0547 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D BCI_0206 recA; recA protein K03553 recA; recombination protein RecA
D BCI_0313 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D BCI_0312 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BCI_0314 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BCI_0166 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D BCI_0573 priN; primosomal replication protein N K02686 priB; primosomal replication protein N
D BCI_0112 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BCI_0387 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BCI_0131 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BCI_0302 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D BCI_0040 hup; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D BCI_0306 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D BCI_0386 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BCI_0385 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:bci03029]
D BCI_0631 infB; translation initiation factor IF2-2 K02519 infB; translation initiation factor IF-2
D BCI_0471 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D BCI_0528 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D BCI_0495 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D BCI_0494 fusA; translation elongation factor G K02355 fusA; elongation factor G
D BCI_0280 era; GTP-binding protein Era K03595 era; GTPase
D BCI_0081 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BCI_0232 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BCI_0315 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BCI_0276 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BCI_0107 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D BCI_0535 outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D BCI_0552 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BCI_0612 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D BCI_0591 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BCI_0592 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D BCI_0553 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D BCI_0006 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BCI_0086 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D BCI_0270 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D BCI_0136 inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BCI_0117 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bci02000]
D BCI_0170 sulfate ABC transporter, sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D BCI_0077 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D BCI_0078 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D BCI_0079 cysA; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D BCI_0324 artI; arginine ABC-transporter, arginine binding protein K09997 artI; arginine transport system substrate-binding protein
D BCI_0326 artM; arginine ABC transporter, permease protein K09998 artM; arginine transport system permease protein
D BCI_0325 artQ; arginine ABC transporter, permease protein K09999 artQ; arginine transport system permease protein
D BCI_0323 artP; arginine ABC transporter, ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D BCI_0207 amino acid ABC transporter, periplasmic amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D BCI_0208 amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D BCI_0250 ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D BCI_0105 cation ABC transporter, permease protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D BCI_0106 troB; cation ABC transporter, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D BCI_0426 lolC; lipoprotein releasing system, transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D BCI_0424 lolE; lipoprotein releasing system, transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D BCI_0425 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BCI_0058 ftsX; protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D BCI_0057 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D BCI_0464 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D BCI_0239 transporter, major facilitator family K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D BCI_0459 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D BCI_0070 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D BCI_0069 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D BCI_0451 PTS system, mannose/fructose/sorbose family, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D BCI_0450 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component
D BCI_0449 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D BCI_0128 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D BCI_0535 outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D BCI_0010 PQQ enzyme repeat domain protein K17713 bamB; outer membrane protein assembly factor BamB
D BCI_0192 conserved hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D BCI_0566 smpA; small protein A K06186 bamE; outer membrane protein assembly factor BamE
D BCI_0606 outer membrane protein, OMP85 family K07278 tamA; translocation and assembly module TamA
D BCI_0607 conserved hypothetical protein K09800 tamB; translocation and assembly module TamB
D BCI_0393 lysP; lysine-specific permease K11733 lysP; lysine-specific permease
D BCI_0055 pitA; low-affinity inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D BCI_0104 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D BCI_0311 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D BCI_0277 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D BCI_0053 membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D BCI_0100 pal; peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein
D BCI_0460 emrA; multidrug resistance protein K03543 emrA; membrane fusion protein, multidrug efflux system
C 02044 Secretion system [BR:bci02044]
D BCI_0599 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D BCI_0496 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D BCI_0600 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D BCI_0635 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D BCI_0348 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D BCI_0199 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BCI_0056 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D BCI_0598 Preprotein translocase YajC K03210 yajC; preprotein translocase subunit YajC
D BCI_0136 inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins
C 02022 Two-component system
C 02035 Bacterial motility proteins [BR:bci02035]
D BCI_0207 amino acid ABC transporter, periplasmic amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bci04812]
D BCI_0049 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D BCI_0517 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BCI_0444 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D BCI_0445 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D BCI_0446 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
C 04147 Exosome [BR:bci04147]
D BCI_0117 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D BCI_0221 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BCI_0443 gapA; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BCI_0645 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D BCI_0310 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BCI_0595 antioxidant, AhpC/TSA family K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D BCI_0591 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BCI_0552 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D BCI_0012 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BCI_0651 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BCI_0495 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D BCI_0428 Hit family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BCI_0118 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D BCI_0035 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BCI_0510 lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BCI_0309 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D BCI_0169 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BCI_0251 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bci02048]
D BCI_0517 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D BCI_0049 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D BCI_0456 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D BCI_0006 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bci03100]
D BCI_0487 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BCI_0455 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BCI_0187 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BCI_0123 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BCI_0202 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BCI_0551 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BCI_0421 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BCI_0158 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BCI_0242 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BCI_0090 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BCI_0092 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BCI_0155 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BCI_0508 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BCI_0241 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BCI_0356 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BCI_0186 tRNA-His K14226 tRNA-His; tRNA His
D BCI_0486 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BCI_0634 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BCI_0610 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BCI_0093 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BCI_0185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BCI_0243 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BCI_0458 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BCI_0091 tRNA-Met K14230 tRNA-Met; tRNA Met
D BCI_0615 tRNA-Met K14230 tRNA-Met; tRNA Met
D BCI_0633 tRNA-Met K14230 tRNA-Met; tRNA Met
D BCI_0594 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BCI_0184 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BCI_0389 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BCI_0203 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BCI_0317 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BCI_0414 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BCI_0358 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BCI_0355 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BCI_0284 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BCI_0159 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BCI_0357 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BCI_0457 tRNA-Val K14237 tRNA-Val; tRNA Val
D BCI_0088 tRNA-Val K14237 tRNA-Val; tRNA Val
D BCI_0154 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BCI_0509 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D BCI_0156 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BCI_0507 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D BCI_0506 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BCI_0157 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D BCI_0569 sRNA K15035 ssrA; transfer-messenger RNA
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D BCI_0308 ftn; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D BCI_0063 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D BCI_0543 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D BCI_0429 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D BCI_0416 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D BCI_0260 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D BCI_0384 iron-sulfur cluster binding protein K11107 yfaE; ferredoxin
D BCI_0095 fldA; flavodoxin K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D BCI_0261 cspE; cold shock-like protein CspE K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D BCI_0266 tig; trigger factor K03545 tig; trigger factor
D BCI_0568 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D BCI_0484 yhgI protein K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D BCI_0018 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
C 99979 Viral proteins
C 99998 Others
D BCI_0116 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
D BCI_0175 peptidase, M23 family K22719 envC; murein hydrolase activator
C 99993 Cell motility
D BCI_0427 conserved hypothetical protein K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
C 99992 Structural proteins
D BCI_0319 lolA; outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D BCI_0291 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D BCI_0536 ompH; outer membrane protein OmpH K06142 hlpA; outer membrane protein
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D BCI_0367 cvpA; CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D BCI_0316 PHP family protein K04477 ycdX; putative hydrolase
D BCI_0225 HesB family protein K15724 erpA; iron-sulfur cluster insertion protein
D BCI_0466 sufA; iron-sulfur cluster assembly accessory protein K05997 sufA; Fe-S cluster assembly protein SufA
D BCI_0465 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D BCI_0463 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D BCI_0461 sufE; SufE protein K02426 sufE; cysteine desulfuration protein SufE
D BCI_0454 rhodanese-like domain protein K07146 K07146; UPF0176 protein
C 99997 Function unknown
D BCI_0135 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D BCI_0304 conserved hypothetical protein K09780 K09780; uncharacterized protein
D BCI_0256 conserved hypothetical protein K09791 K09791; uncharacterized protein
D BCI_0567 conserved hypothetical protein K09801 K09801; uncharacterized protein
D BCI_0190 conserved hypothetical protein K09897 K09897; uncharacterized protein
D BCI_0030 conserved hypothetical protein K09908 K09908; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 22, 2024