+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Baudoinia panamericana

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E BAUCODRAFT_63678 hypothetical protein K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E BAUCODRAFT_347253 hypothetical protein K04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22] E BAUCODRAFT_313765 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E BAUCODRAFT_382033 hypothetical protein K00987 CEG1; mRNA guanylyltransferase [EC:2.7.7.50] D Cap binding complex E BAUCODRAFT_68442 hypothetical protein K12882 NCBP1; nuclear cap-binding protein subunit 1 E BAUCODRAFT_74746 hypothetical protein K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E BAUCODRAFT_567664 hypothetical protein K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 D Pre-mRNA cleavage factor IIm (CFIIm) E BAUCODRAFT_311751 hypothetical protein K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E BAUCODRAFT_33665 hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D Cleavage and polyadenylation specificity factor (CPSF) complex E BAUCODRAFT_25380 hypothetical protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E BAUCODRAFT_71003 hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E BAUCODRAFT_569527 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E BAUCODRAFT_42995 hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E BAUCODRAFT_126572 hypothetical protein K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E BAUCODRAFT_514262 hypothetical protein K15541 MPE1; protein MPE1 E BAUCODRAFT_146005 hypothetical protein K15542 PFS2; polyadenylation factor subunit 2 E BAUCODRAFT_146720 hypothetical protein K14962 WDR82; COMPASS component SWD2 E BAUCODRAFT_552311 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E BAUCODRAFT_578448 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E BAUCODRAFT_64218 hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E BAUCODRAFT_34465 hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2 E BAUCODRAFT_356979 hypothetical protein K14408 CSTF3; cleavage stimulation factor subunit 3 E BAUCODRAFT_36792 hypothetical protein K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E BAUCODRAFT_330833 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B' E BAUCODRAFT_137738 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3 E BAUCODRAFT_76081 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E E BAUCODRAFT_38674 hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F E BAUCODRAFT_577920 hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G E BAUCODRAFT_71003 hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E BAUCODRAFT_569527 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E BAUCODRAFT_34465 hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2 E BAUCODRAFT_36792 hypothetical protein K06100 SYMPK; symplekin D DRB sensitivity inducing factor (DSIF) complex E BAUCODRAFT_34113 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4 E BAUCODRAFT_132609 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E BAUCODRAFT_70727 hypothetical protein K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E BAUCODRAFT_158802 hypothetical protein K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 D Poly(A) addition factors E BAUCODRAFT_78629 hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19] D Negative regulators of mRNA 3' end processing C Other processing factors D BAUCODRAFT_33235 hypothetical protein K13102 KIN; DNA/RNA-binding protein KIN17 D BAUCODRAFT_37388 hypothetical protein K27103 SRRT; serrate RNA effector molecule D BAUCODRAFT_34849 hypothetical protein K23039 NAB2; nuclear polyadenylated RNA-binding protein NAB2 B mRNA surveillance and transport factors C Transport factors D EJC complex E BAUCODRAFT_354528 hypothetical protein K12876 RBM8A; RNA-binding protein 8A E BAUCODRAFT_29225 hypothetical protein K12877 MAGOH; protein mago nashi E BAUCODRAFT_212912 hypothetical protein K12881 THOC4; THO complex subunit 4 E BAUCODRAFT_152279 hypothetical protein K12881 THOC4; THO complex subunit 4 E BAUCODRAFT_35821 hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E BAUCODRAFT_74497 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E BAUCODRAFT_125827 hypothetical protein K25178 CCDC174; coiled-coil domain-containing protein 174 E BAUCODRAFT_49662 hypothetical protein K14324 SAP18; histone deacetylase complex subunit SAP18 E BAUCODRAFT_35364 hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E BAUCODRAFT_41548 hypothetical protein K12878 THOC1; THO complex subunit 1 E BAUCODRAFT_52771 hypothetical protein K12879 THOC2; THO complex subunit 2 E BAUCODRAFT_118160 hypothetical protein K12880 THOC3; THO complex subunit 3 E BAUCODRAFT_212912 hypothetical protein K12881 THOC4; THO complex subunit 4 E BAUCODRAFT_152279 hypothetical protein K12881 THOC4; THO complex subunit 4 E BAUCODRAFT_127257 hypothetical protein K13174 THOC5; THO complex subunit 5 D TREX-2 complex E BAUCODRAFT_56129 hypothetical protein K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E BAUCODRAFT_56393 hypothetical protein K16466 CETN3; centrin-3 E BAUCODRAFT_48635 hypothetical protein K23719 SAC3; nuclear mRNA export protein SAC3 D Nuclear pore complex E BAUCODRAFT_453387 hypothetical protein K14298 RAE1; mRNA export factor E BAUCODRAFT_188970 hypothetical protein K14004 SEC13; protein transport protein SEC13 E BAUCODRAFT_34191 hypothetical protein K14308 NUP54; nuclear pore complex protein Nup54 E BAUCODRAFT_31229 hypothetical protein K14306 NUP62; nuclear pore complex protein Nup62 E BAUCODRAFT_125989 hypothetical protein K14309 NUP93; nuclear pore complex protein Nup93 E BAUCODRAFT_403519 hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E BAUCODRAFT_61324 hypothetical protein K14301 NUP107; nuclear pore complex protein Nup107 E BAUCODRAFT_106312 hypothetical protein K14300 NUP133; nuclear pore complex protein Nup133 E BAUCODRAFT_573479 hypothetical protein K14311 NUP188; nuclear pore complex protein Nup188 E BAUCODRAFT_233569 hypothetical protein K14312 NUP155; nuclear pore complex protein Nup155 E BAUCODRAFT_146420 hypothetical protein K14310 NUP205; nuclear pore complex protein Nup205 E BAUCODRAFT_97744 hypothetical protein K14307 NUPL1; nucleoporin p58/p45 E BAUCODRAFT_68955 hypothetical protein K14315 NDC1; nucleoporin NDC1 E BAUCODRAFT_233614 hypothetical protein K14299 SEH1; nucleoporin SEH1 E BAUCODRAFT_30439 hypothetical protein K18715 NUP159; nucleoporin NUP159 E BAUCODRAFT_30495 hypothetical protein K18716 NUP42; nucleoporin NUP42 E BAUCODRAFT_36668 hypothetical protein K18719 NUP82; nucleoporin NUP82 E BAUCODRAFT_56393 hypothetical protein K16466 CETN3; centrin-3 E BAUCODRAFT_153547 hypothetical protein K18723 GLE1; nucleoporin GLE1 E BAUCODRAFT_35355 hypothetical protein K14284 NXF; nuclear RNA export factor E BAUCODRAFT_329773 hypothetical protein K14285 NXT1_2; NTF2-related export protein 1/2 E BAUCODRAFT_36408 hypothetical protein K18724 POM34; nucleoporin POM34 E BAUCODRAFT_84004 hypothetical protein K18725 POM152; nucleoporin POM152 D Ran-mediated transport factors E BAUCODRAFT_30924 hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran E BAUCODRAFT_151643 hypothetical protein K18726 FAF2; FAS-associated factor 2 E BAUCODRAFT_31880 hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase E BAUCODRAFT_460960 hypothetical protein K14290 XPO1; exportin-1 E BAUCODRAFT_246917 hypothetical protein K14319 RANGAP1; Ran GTPase-activating protein 1 E BAUCODRAFT_114866 hypothetical protein K14651 TAF15; transcription initiation factor TFIID subunit 15 D eIF4F and regulatory proteins E BAUCODRAFT_74055 hypothetical protein K03259 EIF4E; translation initiation factor 4E E BAUCODRAFT_55557 hypothetical protein K03259 EIF4E; translation initiation factor 4E E BAUCODRAFT_533077 hypothetical protein K03257 EIF4A; translation initiation factor 4A E BAUCODRAFT_55934 hypothetical protein K03260 EIF4G; translation initiation factor 4G E BAUCODRAFT_22920 hypothetical protein K03258 EIF4B; translation initiation factor 4B E BAUCODRAFT_121063 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E BAUCODRAFT_80455 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E BAUCODRAFT_34149 hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E BAUCODRAFT_86883 hypothetical protein K13126 PABPC; polyadenylate-binding protein E BAUCODRAFT_37952 hypothetical protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E BAUCODRAFT_142160 hypothetical protein K18664 SLH1; antiviral helicase SLH1 [EC:5.6.2.6] E BAUCODRAFT_180721 hypothetical protein K07575 MCTS; malignant T-cell-amplified sequence E BAUCODRAFT_239124 hypothetical protein K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E BAUCODRAFT_34853 hypothetical protein K14294 WIBG; partner of Y14 and mago E BAUCODRAFT_511421 hypothetical protein K14411 MSI; RNA-binding protein Musashi E BAUCODRAFT_21387 hypothetical protein K14416 HBS1; elongation factor 1 alpha-like protein E BAUCODRAFT_340166 hypothetical protein K06965 PELO; protein pelota E BAUCODRAFT_68306 hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2 E BAUCODRAFT_65106 hypothetical protein K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E BAUCODRAFT_295647 hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1 E BAUCODRAFT_554568 hypothetical protein K18732 SARNP; SAP domain-containing ribonucleoprotein E BAUCODRAFT_76837 hypothetical protein K11493 RCC1; regulator of chromosome condensation E BAUCODRAFT_76271 hypothetical protein K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E BAUCODRAFT_68953 hypothetical protein K03265 ETF1; peptide chain release factor subunit 1 E BAUCODRAFT_29939 hypothetical protein K03267 ERF3; peptide chain release factor subunit 3 E BAUCODRAFT_399389 hypothetical protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E BAUCODRAFT_69588 hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2 E BAUCODRAFT_78782 hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E BAUCODRAFT_79745 hypothetical protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E BAUCODRAFT_144320 hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E BAUCODRAFT_37069 hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E BAUCODRAFT_75082 hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E BAUCODRAFT_34149 hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E BAUCODRAFT_138223 hypothetical protein K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E BAUCODRAFT_40021 hypothetical protein K14844 PUF6; pumilio homology domain family member 6 E BAUCODRAFT_60994 hypothetical protein K18738 HEK; heterogeneous nuclear rnp K-like protein E BAUCODRAFT_359485 hypothetical protein K18738 HEK; heterogeneous nuclear rnp K-like protein E BAUCODRAFT_32899 hypothetical protein K10357 MYO5; myosin V E BAUCODRAFT_47352 hypothetical protein K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals D Trans-acting binding proteins E BAUCODRAFT_25198 hypothetical protein K13210 FUBP; far upstream element-binding protein E BAUCODRAFT_28973 hypothetical protein K03231 EEF1A; elongation factor 1-alpha E BAUCODRAFT_78172 hypothetical protein K03233 EEF1G; elongation factor 1-gamma D Other mRNA localization factors E BAUCODRAFT_144773 hypothetical protein K18748 SSD1; protein SSD1 C mRNA cycle factors D Common to processing body (P body) and stress granule E BAUCODRAFT_64185 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C E BAUCODRAFT_410279 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C E BAUCODRAFT_74055 hypothetical protein K03259 EIF4E; translation initiation factor 4E E BAUCODRAFT_55557 hypothetical protein K03259 EIF4E; translation initiation factor 4E E BAUCODRAFT_399389 hypothetical protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E BAUCODRAFT_121063 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E BAUCODRAFT_80455 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E BAUCODRAFT_371348 hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E BAUCODRAFT_38569 hypothetical protein K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] E BAUCODRAFT_69765 hypothetical protein K18752 TNPO1; transportin-1 E BAUCODRAFT_75293 hypothetical protein K04345 PKA; protein kinase A [EC:2.7.11.11] E BAUCODRAFT_84800 hypothetical protein K04345 PKA; protein kinase A [EC:2.7.11.11] E BAUCODRAFT_61582 hypothetical protein K18757 LARP1; la-related protein 1 D P-body specific factors E BAUCODRAFT_120963 hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E BAUCODRAFT_34961 hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E BAUCODRAFT_138202 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E BAUCODRAFT_122769 hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E BAUCODRAFT_127288 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E BAUCODRAFT_287708 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E BAUCODRAFT_118700 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E BAUCODRAFT_32899 hypothetical protein K10357 MYO5; myosin V E BAUCODRAFT_34133 hypothetical protein K07374 TUBA; tubulin alpha E BAUCODRAFT_159617 hypothetical protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E BAUCODRAFT_26655 hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E BAUCODRAFT_38608 hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E BAUCODRAFT_348503 hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E BAUCODRAFT_63084 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E BAUCODRAFT_67865 hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E BAUCODRAFT_119247 hypothetical protein K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E BAUCODRAFT_151644 hypothetical protein K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E BAUCODRAFT_38626 hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E BAUCODRAFT_121095 hypothetical protein K12615 EDC3; enhancer of mRNA-decapping protein 3 E BAUCODRAFT_69588 hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2 E BAUCODRAFT_78782 hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3 E BAUCODRAFT_228826 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 D Stress granule specific factors E BAUCODRAFT_416441 hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR E BAUCODRAFT_86883 hypothetical protein K13126 PABPC; polyadenylate-binding protein E BAUCODRAFT_35841 hypothetical protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E BAUCODRAFT_63591 hypothetical protein K15026 EIF2A; translation initiation factor 2A E BAUCODRAFT_325322 hypothetical protein K03253 EIF3B; translation initiation factor 3 subunit B E BAUCODRAFT_533077 hypothetical protein K03257 EIF4A; translation initiation factor 4A E BAUCODRAFT_74497 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E BAUCODRAFT_22920 hypothetical protein K03258 EIF4B; translation initiation factor 4B E BAUCODRAFT_55934 hypothetical protein K03260 EIF4G; translation initiation factor 4G E BAUCODRAFT_38509 hypothetical protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E BAUCODRAFT_35355 hypothetical protein K14284 NXF; nuclear RNA export factor E BAUCODRAFT_69749 hypothetical protein K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] B mRNA degradation factors C 5'-3' decay D Decapping complex E BAUCODRAFT_120963 hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E BAUCODRAFT_371348 hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E BAUCODRAFT_121095 hypothetical protein K12615 EDC3; enhancer of mRNA-decapping protein 3 E BAUCODRAFT_38626 hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D Lsm complex E BAUCODRAFT_34961 hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E BAUCODRAFT_138202 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E BAUCODRAFT_122769 hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E BAUCODRAFT_127288 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E BAUCODRAFT_287708 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E BAUCODRAFT_118700 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases D Other 5'-3' decay factors E BAUCODRAFT_78928 hypothetical protein K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] C 3'-5' decay D Core exosome factors E BAUCODRAFT_426426 hypothetical protein K07573 CSL4; exosome complex component CSL4 E BAUCODRAFT_78185 hypothetical protein K03679 RRP4; exosome complex component RRP4 E BAUCODRAFT_67161 hypothetical protein K03681 RRP40; exosome complex component RRP40 E BAUCODRAFT_352759 hypothetical protein K11600 RRP41; exosome complex component RRP41 E BAUCODRAFT_41389 hypothetical protein K12590 RRP46; exosome complex component RRP46 E BAUCODRAFT_60118 hypothetical protein K12587 MTR3; exosome complex component MTR3 E BAUCODRAFT_201970 hypothetical protein K12589 RRP42; exosome complex component RRP42 E BAUCODRAFT_555446 hypothetical protein K12586 RRP43; exosome complex component RRP43 E BAUCODRAFT_146018 hypothetical protein K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E BAUCODRAFT_29619 hypothetical protein K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] E BAUCODRAFT_366269 hypothetical protein K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E BAUCODRAFT_32044 hypothetical protein K12592 C1D; exosome complex protein LRP1 E BAUCODRAFT_124551 hypothetical protein K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] D TRAMP complex E BAUCODRAFT_122885 hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E BAUCODRAFT_49110 hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E BAUCODRAFT_147755 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E BAUCODRAFT_37952 hypothetical protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E BAUCODRAFT_374081 hypothetical protein K12600 SKI3; superkiller protein 3 E BAUCODRAFT_147283 hypothetical protein K12601 SKI8; superkiller protein 8 D Ccr4-NOT complex E BAUCODRAFT_63084 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E BAUCODRAFT_159617 hypothetical protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E BAUCODRAFT_26655 hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E BAUCODRAFT_38608 hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E BAUCODRAFT_348503 hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E BAUCODRAFT_67865 hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E BAUCODRAFT_29706 hypothetical protein K12606 RCD1; CCR4-NOT transcription complex subunit 9 E BAUCODRAFT_104610 hypothetical protein K12608 CAF16; CCR4-NOT complex subunit CAF16 E BAUCODRAFT_533144 hypothetical protein K12609 CAF120; CCR4-NOT transcriptional complex subunit CAF120 D Pan complex E BAUCODRAFT_119247 hypothetical protein K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E BAUCODRAFT_151644 hypothetical protein K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E BAUCODRAFT_59256 hypothetical protein K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E BAUCODRAFT_261696 hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E BAUCODRAFT_78928 hypothetical protein K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E BAUCODRAFT_38105 hypothetical protein K26109 NRDE2; nuclear exosome regulator NRDE2 E BAUCODRAFT_30765 hypothetical protein K27407 VTS1; RNA-binding protein VTS1 C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E BAUCODRAFT_69163 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] E BAUCODRAFT_49884 hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E BAUCODRAFT_39546 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E BAUCODRAFT_257650 hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E BAUCODRAFT_113971 hypothetical protein K04043 dnaK; molecular chaperone DnaK E BAUCODRAFT_435612 hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E BAUCODRAFT_78185 hypothetical protein K03679 RRP4; exosome complex component RRP4 E BAUCODRAFT_426426 hypothetical protein K07573 CSL4; exosome complex component CSL4 D Cofactors E BAUCODRAFT_352759 hypothetical protein K11600 RRP41; exosome complex component RRP41 E BAUCODRAFT_201970 hypothetical protein K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024