+E Transcription factors KO
#
Transcription Factors - Burkholderia contaminans
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D NL30_29085 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D NL30_18815 AraC family transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D NL30_23675 AraC family transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D NL30_01040 AraC family transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D NL30_11860 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D NL30_18895 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D NL30_24480 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D NL30_24685 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D NL30_11645 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D NL30_06835 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D NL30_31185 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D NL30_31295 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D NL30_28935 AraC family transcriptional regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D NL30_23460 Ada K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D NL30_16155 transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D NL30_01705 transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D NL30_01035 AraC family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D NL30_09745 AraC family transcriptional regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D NL30_00880 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D NL30_15825 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
C LysR family
D NL30_27540 XRE family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_20335 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_28140 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_33660 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_03230 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_17230 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_35480 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_36180 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_23175 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_27855 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_24125 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_06515 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_06570 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_15795 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_33835 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_25655 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_34885 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_34950 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_17270 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_03840 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_31145 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_35865 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_15055 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NL30_06080 LysR family transcriptional regulator K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D NL30_36105 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D NL30_00125 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D NL30_09365 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D NL30_20495 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D NL30_25240 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D NL30_17185 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D NL30_24810 transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D NL30_34065 hypothetical protein K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D NL30_30625 transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D NL30_15115 transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D NL30_04645 LysR family transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D NL30_23015 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D NL30_16720 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D NL30_16880 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D NL30_03530 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D NL30_26395 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D NL30_18140 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D NL30_22155 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D NL30_01635 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D NL30_16065 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D NL30_16565 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D NL30_31265 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D NL30_03185 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D NL30_26355 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D NL30_22160 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D NL30_11135 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D NL30_35130 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D NL30_06445 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D NL30_35010 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D NL30_20760 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D NL30_05400 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D NL30_23835 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D NL30_24695 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D NL30_22065 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D NL30_21770 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
C DeoR family
D NL30_31500 DeoR faimly transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D NL30_26465 DeoR faimly transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D NL30_00190 AraC family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D NL30_23890 alkaline phosphatase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D NL30_05605 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NL30_23450 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NL30_32770 AraC family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NL30_15090 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NL30_34020 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NL30_26510 sugar ABC transporter substrate-binding protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NL30_14195 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D NL30_32555 LacI family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
C GntR family
D NL30_31955 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D NL30_25680 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D NL30_22040 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D NL30_17710 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D NL30_15665 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D NL30_27220 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D NL30_07530 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D NL30_12920 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D NL30_17630 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D NL30_26840 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D NL30_20875 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D NL30_00470 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D NL30_09815 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D NL30_32650 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D NL30_01170 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D NL30_34260 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D NL30_17930 transcriptional regulator K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D NL30_32350 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NL30_05630 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NL30_06695 2-aminoadipate aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NL30_05760 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NL30_07615 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NL30_16610 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NL30_07750 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NL30_03675 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NL30_25025 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NL30_00285 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D NL30_24660 transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D NL30_35635 GntR family transcriptional regulator K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
D NL30_35605 GntR family transcriptional regulator K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
C TetR/AcrR family
D NL30_11900 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D NL30_00810 BetI family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D NL30_26120 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D NL30_28585 dihydroorotate oxidase K05501 slmA; TetR/AcrR family transcriptional regulator
D NL30_01770 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D NL30_16265 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D NL30_33415 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D NL30_02575 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D NL30_04300 hypothetical protein K09017 rutR; TetR/AcrR family transcriptional regulator
D NL30_33695 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D NL30_22050 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D NL30_32475 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D NL30_00940 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D NL30_16790 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D NL30_17035 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D NL30_33920 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D NL30_04800 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D NL30_16540 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D NL30_35220 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D NL30_14980 TetR family transcriptional regulator K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D NL30_07700 TetR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
C Lrp/AsnC family
D NL30_05475 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_27910 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_10330 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_04215 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_18250 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_22675 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_18455 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_05220 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_19110 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_23480 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_25730 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_25965 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_17780 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_00155 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NL30_09625 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D NL30_24165 AsnC family transcriptional regulator K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon
C LuxR family
D NL30_14395 hypothetical protein K18304 lasR; LuxR family transcriptional regulator, quorum-sensing system regulator LasR
D NL30_02720 LuxR family transcriptional regulator K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D NL30_34365 LuxR family transcriptional regulator K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons
D NL30_33865 LuxR family transcriptional regulator K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons
D NL30_34370 LuxR family transcriptional regulator K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons
D NL30_14650 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D NL30_33750 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D NL30_06935 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D NL30_16000 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D NL30_07870 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D NL30_14495 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D NL30_22215 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D NL30_18185 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D NL30_02580 transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D NL30_35705 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D NL30_13680 MerR family transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
C Fur family
D NL30_20855 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NL30_26065 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D NL30_17335 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D NL30_05030 4-hydroxyphenylpyruvate dioxygenase K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D NL30_16705 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D NL30_05265 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D NL30_34135 transcriptional regulator K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D NL30_24750 transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D NL30_12115 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D NL30_09660 IclR family transcriptional regulator K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
D NL30_33285 IclR family transcriptional regulator K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
C CRP/FNR family
D NL30_15705 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NL30_37790 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NL30_32160 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D NL30_05185 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D NL30_25235 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D NL30_12140 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D NL30_13590 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D NL30_23780 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
C PadR family
C Other families
D NL30_20805 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D NL30_26790 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D NL30_27615 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D NL30_20640 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D NL30_17395 Fis family transcriptional regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D NL30_04495 antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D NL30_04990 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D NL30_24395 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D NL30_31315 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D NL30_01350 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D NL30_00640 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D NL30_13620 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D NL30_23885 ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D NL30_07905 ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D NL30_33725 transporter K02019 modE; molybdate transport system regulatory protein
D NL30_11565 hypothetical protein K21829 dauR; D-arginine utilization repressor
D NL30_14125 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D NL30_18955 putA; transcriptional regulator K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D NL30_13245 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D NL30_19030 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NL30_33675 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NL30_18075 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NL30_36350 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NL30_07160 transcriptional regulator K02443 glpP; glycerol uptake operon antiterminator
D NL30_11985 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D NL30_02670 elongation factor GreAB K06140 rnk; regulator of nucleoside diphosphate kinase
D NL30_11435 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D NL30_29025 regulatory protein K07733 alpA; prophage regulatory protein
D NL30_00290 transcriptional regulator K07734 paiB; transcriptional regulator
D NL30_11445 hypothetical protein K07735 algH; putative transcriptional regulator
D NL30_28545 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D NL30_05890 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D NL30_11770 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D NL30_22230 transcriptional regulator K14414 rtcR; transcriptional regulatory protein RtcR
D NL30_21330 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
#
Classification taken and modified from TRANSFAC 7.0