+D GENES KO
#
KEGG Orthology (KO) - Brevibacillus composti
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bcop00010]
D JD108_03230 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JD108_18775 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JD108_16835 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JD108_20850 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JD108_04965 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JD108_20865 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JD108_19580 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JD108_19590 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JD108_16710 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D JD108_19585 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JD108_19575 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JD108_19570 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JD108_16830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JD108_10545 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JD108_10550 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JD108_10555 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10325 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JD108_10330 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JD108_13920 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_11475 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_11610 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JD108_04390 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JD108_00215 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:bcop00020]
D JD108_16805 citZ; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JD108_02200 citrate synthase/methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JD108_00275 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JD108_06415 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JD108_16800 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10325 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JD108_10330 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JD108_17215 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JD108_09765 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JD108_17220 acetate--CoA ligase family protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JD108_09760 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JD108_01985 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D JD108_16000 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JD108_17200 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JD108_15995 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JD108_17195 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JD108_16005 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JD108_17205 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JD108_13770 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D JD108_17190 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D JD108_17185 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D JD108_17105 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JD108_16795 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JD108_10735 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D JD108_06980 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JD108_04390 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JD108_10545 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JD108_10550 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JD108_10555 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bcop00030]
D JD108_18775 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JD108_09160 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JD108_06150 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JD108_20860 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JD108_20785 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JD108_14335 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D JD108_05730 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D JD108_12935 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D JD108_11610 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JD108_00670 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JD108_19300 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JD108_21130 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D JD108_21135 gluconate 2-dehydrogenase subunit 3 family protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D JD108_05000 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D JD108_15845 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D JD108_16375 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D JD108_20865 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JD108_20850 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JD108_04965 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JD108_16835 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:bcop00040]
D JD108_11140 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JD108_09160 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JD108_12165 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:bcop00051]
D JD108_08810 NTP transferase domain-containing protein K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D JD108_16835 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JD108_20850 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JD108_04965 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JD108_00760 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D JD108_20865 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JD108_19580 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JD108_20785 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JD108_00765 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:bcop00052]
D JD108_20060 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JD108_11870 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JD108_11875 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JD108_11610 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JD108_03230 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JD108_16835 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
D JD108_11140 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:bcop00500]
D JD108_00215 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JD108_11610 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JD108_03230 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JD108_18775 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bcop00520]
D JD108_02060 glycoside hydrolase family 3 C-terminal domain-containing protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JD108_05690 glycoside hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JD108_00215 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JD108_00205 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D JD108_05695 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D JD108_05540 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D JD108_01685 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JD108_01680 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D JD108_00665 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JD108_16960 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D JD108_20610 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JD108_20855 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JD108_08550 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JD108_08545 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JD108_20765 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JD108_16150 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D JD108_11410 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D JD108_11880 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D JD108_03230 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JD108_11610 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JD108_11140 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JD108_20060 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JD108_11870 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JD108_11875 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JD108_18775 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JD108_08810 NTP transferase domain-containing protein K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
C 00620 Pyruvate metabolism [PATH:bcop00620]
D JD108_13920 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_11475 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_10325 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JD108_10330 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JD108_10545 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JD108_10550 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JD108_10555 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_16830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JD108_16840 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JD108_13205 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JD108_08430 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JD108_13200 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JD108_08425 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JD108_16845 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JD108_01985 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D JD108_13475 thiamine pyrophosphate-binding protein K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D JD108_06360 aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D JD108_08375 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JD108_19120 larA; nickel-dependent lactate racemase K22373 larA; lactate racemase [EC:5.1.2.1]
D JD108_05000 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D JD108_16860 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JD108_06980 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JD108_16795 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JD108_10735 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D JD108_13770 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D JD108_17190 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D JD108_17185 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D JD108_17105 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JD108_04390 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JD108_00135 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_16300 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D JD108_05915 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bcop00630]
D JD108_00140 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D JD108_13920 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_11475 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_00135 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D JD108_16795 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JD108_16805 citZ; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JD108_02200 citrate synthase/methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JD108_00275 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JD108_06415 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_12980 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D JD108_12985 mce; methylmalonyl-CoA epimerase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JD108_12990 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JD108_21695 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D JD108_21080 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D JD108_21075 (Fe-S)-binding protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D JD108_21690 (Fe-S)-binding protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D JD108_10995 catalase K03781 katE; catalase [EC:1.11.1.6]
D JD108_05000 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D JD108_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_10455 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_20775 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_06700 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_11675 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_13345 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JD108_13340 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JD108_13350 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_04365 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JD108_06715 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JD108_03780 garR; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D JD108_19110 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JD108_07975 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D JD108_11335 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D JD108_19300 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JD108_08930 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D JD108_03950 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:bcop00640]
D JD108_13920 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_11475 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_13010 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JD108_13005 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JD108_13000 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_20905 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_16840 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JD108_13205 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JD108_08430 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JD108_13200 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JD108_08425 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JD108_16845 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JD108_14050 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JD108_12980 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D JD108_12985 mce; methylmalonyl-CoA epimerase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JD108_12990 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JD108_17220 acetate--CoA ligase family protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JD108_09760 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JD108_17215 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JD108_09765 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JD108_10795 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JD108_00265 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D JD108_00270 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D JD108_12260 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D JD108_06360 aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:bcop00650]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20915 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JD108_21625 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JD108_21630 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JD108_04220 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_08440 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_20905 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D JD108_14065 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D JD108_14060 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D JD108_07975 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D JD108_11335 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D JD108_16000 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JD108_17200 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JD108_15995 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JD108_17195 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JD108_16005 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JD108_17205 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JD108_14050 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JD108_21550 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JD108_07950 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JD108_01985 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D JD108_10325 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JD108_10330 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JD108_04830 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JD108_08435 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JD108_03980 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JD108_03975 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JD108_10220 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D JD108_16315 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JD108_19420 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JD108_16310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JD108_19415 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:bcop00660]
D JD108_16315 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JD108_19420 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JD108_16310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JD108_19415 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JD108_17220 acetate--CoA ligase family protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JD108_09760 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JD108_17215 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JD108_09765 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JD108_17245 MaoC family dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D JD108_11190 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JD108_11185 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JD108_16295 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bcop00562]
D JD108_06045 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JD108_06245 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JD108_11585 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D JD108_10795 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JD108_19580 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bcop00190]
D JD108_20675 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D JD108_20670 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D JD108_20665 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D JD108_20660 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D JD108_20655 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D JD108_20650 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D JD108_20645 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D JD108_20640 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D JD108_20635 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D JD108_20630 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D JD108_20625 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D JD108_05045 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JD108_05135 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JD108_16000 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JD108_17200 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JD108_15995 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JD108_17195 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JD108_16005 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JD108_17205 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JD108_12300 ubiquinol-cytochrome c reductase iron-sulfur subunit K03886 qcrA; quinol---cytochrome c reductase iron-sulfur subunit, bacillus type [EC:7.1.1.8]
D JD108_12295 cytochrome b6 K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8]
D JD108_12290 c-type cytochrome K03888 qcrC; quinol---cytochrome c reductase cytochrome c subunit, bacillus type [EC:7.1.1.8]
D JD108_18970 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JD108_17470 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D JD108_18985 cytochrome C oxidase subunit IV family protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D JD108_18990 cytochrome (ubi)quinol oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D JD108_18995 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D JD108_02115 b(o/a)3-type cytochrome-c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D JD108_19000 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D JD108_02110 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D JD108_05085 cupredoxin domain-containing protein K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D JD108_18965 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D JD108_17480 cbb3-type cytochrome c oxidase subunit I K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D JD108_17475 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D JD108_01995 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JD108_02325 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JD108_01990 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JD108_02330 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JD108_20700 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JD108_20690 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JD108_20695 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JD108_20705 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JD108_20685 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JD108_20720 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JD108_20710 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JD108_20715 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JD108_12635 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D JD108_21205 HAD-IA family hydrolase K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:bcop00710]
D JD108_19585 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JD108_19590 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JD108_16710 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D JD108_20865 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JD108_20850 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JD108_04965 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JD108_06150 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JD108_20785 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JD108_19580 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JD108_09160 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JD108_20860 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JD108_04390 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JD108_16795 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:bcop00720]
D JD108_06980 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JD108_16795 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JD108_13770 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D JD108_17190 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D JD108_17185 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D JD108_17105 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JD108_16000 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JD108_17200 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JD108_15995 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JD108_17195 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JD108_16005 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JD108_17205 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JD108_17215 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JD108_09765 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JD108_17220 acetate--CoA ligase family protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JD108_09760 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_10325 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JD108_10330 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JD108_16800 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JD108_00275 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JD108_06415 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JD108_16840 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JD108_13205 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JD108_08430 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JD108_13200 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JD108_08425 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JD108_16845 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JD108_08410 enoyl-CoA hydratase/isomerase family protein K15019 K15019; 3-hydroxypropionyl-coenzyme A dehydratase [EC:4.2.1.116]
D JD108_12990 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JD108_12985 mce; methylmalonyl-CoA epimerase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JD108_19200 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D JD108_13170 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JD108_13920 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_11475 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:bcop00680]
D JD108_20775 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_06700 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_11675 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_19570 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JD108_16795 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JD108_20865 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JD108_20850 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JD108_04965 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JD108_16835 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JD108_13920 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_11475 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_19575 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JD108_12730 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JD108_13260 phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
D JD108_13265 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:bcop00910]
D JD108_05680 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D JD108_18940 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D JD108_21335 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D JD108_12585 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D JD108_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_10455 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_16470 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JD108_13085 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:bcop00920]
D JD108_11275 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JD108_11280 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D JD108_11285 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D JD108_11290 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JD108_16320 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JD108_10075 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D JD108_16325 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D JD108_01735 DoxX family membrane protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D JD108_13625 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JD108_01220 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JD108_12665 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JD108_15925 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JD108_01050 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JD108_18910 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D JD108_08340 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JD108_05020 bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bcop00061]
D JD108_16840 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JD108_13205 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JD108_08430 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JD108_13200 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JD108_08425 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JD108_16845 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JD108_09550 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D JD108_09540 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JD108_15505 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JD108_08965 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JD108_09535 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JD108_09555 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JD108_09545 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_10255 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_11170 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_11345 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_20565 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JD108_07260 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JD108_18300 fabL; enoyl-[acyl-carrier-protein] reductase FabL K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D JD108_16055 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JD108_05375 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bcop00071]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_04225 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_04220 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D JD108_16045 enoyl-CoA hydratase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_20905 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D JD108_16055 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JD108_05375 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JD108_21400 AMP-binding protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bcop00561]
D JD108_19110 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JD108_09005 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JD108_09530 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JD108_12520 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JD108_12545 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JD108_14255 diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JD108_03235 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JD108_01150 glycosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D JD108_06915 glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:bcop00564]
D JD108_12515 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JD108_09010 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JD108_12520 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JD108_12545 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JD108_14255 diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JD108_03235 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JD108_08225 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D JD108_14085 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JD108_21180 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JD108_06330 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JD108_21400 AMP-binding protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D JD108_10010 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JD108_01190 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D JD108_03180 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D JD108_10280 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JD108_11855 phosphatase PAP2 family protein K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D JD108_21895 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D JD108_20570 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D JD108_03110 heptaprenylglyceryl phosphate synthase K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
D JD108_19825 acyltransferase K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:bcop00592]
D JD108_04225 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bcop00230]
D JD108_12965 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JD108_12935 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D JD108_11610 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JD108_00670 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JD108_02955 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JD108_02985 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JD108_02965 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JD108_02950 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D JD108_02940 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D JD108_02945 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JD108_02960 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D JD108_02855 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D JD108_02850 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JD108_02935 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D JD108_02860 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JD108_02980 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JD108_15245 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JD108_04310 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JD108_15590 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JD108_07190 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JD108_12930 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JD108_11860 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JD108_08615 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JD108_00805 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D JD108_00110 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JD108_12410 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JD108_06770 DUF84 family protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D JD108_15705 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JD108_05800 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D JD108_02830 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JD108_05530 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D JD108_09105 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D JD108_11255 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JD108_11260 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JD108_13860 deoxynucleoside kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113]
D JD108_15240 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JD108_05965 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D JD108_11910 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D JD108_21955 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JD108_13855 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D JD108_03015 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D JD108_15360 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D JD108_10310 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JD108_01470 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JD108_16320 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JD108_08905 allB; allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5]
D JD108_03905 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D JD108_11300 M20 family metallo-hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D JD108_17035 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D JD108_21170 ggt; gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D JD108_16470 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:bcop00240]
D JD108_19950 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JD108_08865 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JD108_19955 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JD108_08860 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JD108_08850 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JD108_08855 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JD108_08900 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D JD108_08895 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D JD108_04095 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D JD108_08875 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JD108_08870 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JD108_09995 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JD108_12410 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JD108_15490 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D JD108_20880 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JD108_12550 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JD108_15100 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D JD108_15590 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JD108_07190 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JD108_21215 nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D JD108_20770 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JD108_08840 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JD108_15360 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D JD108_10310 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JD108_02030 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D JD108_12925 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D JD108_14245 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D JD108_11255 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JD108_11260 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JD108_13855 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D JD108_00550 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JD108_11265 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JD108_20825 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D JD108_05895 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JD108_10820 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D JD108_10825 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D JD108_10830 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JD108_10835 acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D JD108_08890 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bcop00250]
D JD108_00855 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JD108_09700 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JD108_12580 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JD108_13730 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JD108_14490 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JD108_04090 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JD108_05365 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D JD108_19920 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JD108_19915 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JD108_05650 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JD108_21955 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JD108_02860 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JD108_08850 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JD108_14050 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JD108_21550 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JD108_07950 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JD108_21335 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D JD108_12585 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D JD108_03165 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D JD108_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_10455 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_19950 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JD108_08865 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JD108_19955 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JD108_08860 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JD108_13505 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D JD108_02945 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JD108_01685 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JD108_02955 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bcop00260]
D JD108_16015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_03575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_06270 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_10130 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_10125 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JD108_15390 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JD108_09000 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JD108_12005 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JD108_15380 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D JD108_15385 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JD108_05235 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D JD108_10510 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D JD108_20775 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_06700 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_11675 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_05000 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D JD108_19110 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JD108_19575 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JD108_12730 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JD108_11500 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JD108_13345 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JD108_13340 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JD108_13350 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_04365 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JD108_06715 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JD108_01190 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D JD108_05520 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D JD108_18880 solA; N-methyl-L-tryptophan oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D JD108_05020 bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D JD108_06705 hypothetical protein K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JD108_06710 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JD108_09245 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JD108_09250 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JD108_11085 ACT domain-containing protein K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JD108_18485 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JD108_05600 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JD108_12355 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JD108_12360 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:bcop00270]
D JD108_01220 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JD108_12665 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JD108_15925 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JD108_01050 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JD108_05020 bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D JD108_05015 cysK; cysteine synthase A K17216 mccA; cystathionine beta-synthase (O-acetyl-L-serine) [EC:2.5.1.134]
D JD108_13680 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JD108_13675 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D JD108_20175 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JD108_03840 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D JD108_08280 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D JD108_20960 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JD108_05880 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JD108_01155 HAD-IA family hydrolase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D JD108_06535 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D JD108_04275 S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D JD108_08615 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JD108_16995 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D JD108_12200 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D JD108_04280 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D JD108_04260 methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D JD108_04270 2,3-diketo-5-methylthiopentyl-1-phosphate enolase K08965 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [EC:5.3.2.5]
D JD108_04265 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D JD108_04255 cupin domain-containing protein K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D JD108_06440 pyridoxal phosphate-dependent aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D JD108_21125 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D JD108_10665 PLP-dependent transferase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D JD108_08490 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JD108_16015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_03575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_06270 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_10130 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_10125 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JD108_15390 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JD108_09000 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JD108_12005 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JD108_18910 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D JD108_08340 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JD108_02315 homocysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D JD108_16745 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JD108_13625 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JD108_05395 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D JD108_16795 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JD108_06705 hypothetical protein K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JD108_06710 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JD108_09245 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JD108_09250 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JD108_11085 ACT domain-containing protein K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JD108_12730 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:bcop00280]
D JD108_16745 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JD108_13020 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D JD108_13010 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JD108_13005 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JD108_13000 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_20905 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_04225 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JD108_12980 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D JD108_12985 mce; methylmalonyl-CoA epimerase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JD108_12990 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JD108_05495 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JD108_18275 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JD108_12160 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JD108_10795 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JD108_14050 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JD108_04830 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JD108_08435 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JD108_03980 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JD108_03975 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bcop00290]
D JD108_18485 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JD108_05600 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JD108_11190 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JD108_11185 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JD108_16295 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D JD108_16315 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JD108_19420 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JD108_16310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JD108_19415 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JD108_16305 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JD108_19410 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JD108_06230 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JD108_16745 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JD108_13020 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D JD108_16300 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D JD108_05915 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bcop00300]
D JD108_15390 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JD108_09000 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JD108_12005 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JD108_16015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_03575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_06270 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_10130 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_10125 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JD108_10135 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JD108_12265 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JD108_19960 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JD108_08185 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JD108_15755 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JD108_05970 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JD108_11375 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JD108_02035 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JD108_06775 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JD108_04350 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D JD108_12830 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JD108_08180 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D JD108_08190 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D JD108_03830 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D JD108_06445 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D JD108_08520 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JD108_14310 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bcop00310]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_17670 putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D JD108_14050 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JD108_21550 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JD108_07950 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JD108_21720 lhgO; L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D JD108_20930 ablA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D JD108_14065 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D JD108_14060 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D JD108_13330 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JD108_05765 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:bcop00220]
D JD108_19945 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JD108_19920 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JD108_19915 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JD108_05650 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JD108_01650 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D JD108_11550 carboxyltransferase domain-containing protein K01941 uca; urea carboxylase [EC:6.3.4.6]
D JD108_11655 nitric oxide synthase oxygenase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D JD108_13505 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D JD108_02945 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JD108_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_10455 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_19950 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JD108_08865 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JD108_19955 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JD108_08860 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JD108_16470 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JD108_21335 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D JD108_12585 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D JD108_05955 N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D JD108_19965 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D JD108_19970 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D JD108_19960 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JD108_08185 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JD108_14055 peptidase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:bcop00330]
D JD108_08250 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D JD108_05515 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D JD108_20955 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D JD108_20960 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JD108_05880 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JD108_03840 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D JD108_08280 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D JD108_17670 putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D JD108_03690 GNAT family N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D JD108_11220 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JD108_11655 nitric oxide synthase oxygenase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D JD108_01650 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D JD108_13520 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D JD108_18270 NAD(P)-binding domain-containing protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D JD108_04180 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D JD108_18645 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D JD108_03165 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D JD108_04190 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JD108_04185 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D JD108_13330 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JD108_05765 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:bcop00340]
D JD108_19815 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D JD108_19820 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D JD108_19785 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D JD108_19795 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D JD108_19800 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D JD108_19790 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D JD108_19805 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D JD108_12350 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JD108_19810 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D JD108_13815 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D JD108_19685 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D JD108_19670 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D JD108_06315 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D JD108_19675 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D JD108_06320 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D JD108_07725 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:bcop00350]
D JD108_12350 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JD108_06015 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D JD108_07005 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D JD108_17920 hypothetical protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D JD108_21550 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JD108_07950 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:bcop00360]
D JD108_10895 aromatic amino acid hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D JD108_21645 paaF; phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D JD108_21660 hotdog fold thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D JD108_21570 paaA; 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D JD108_21565 paaH; 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D JD108_21560 paaC; phenylacetate-CoA oxygenase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D JD108_21555 paaJ; phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D JD108_21635 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D JD108_09070 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_20915 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JD108_21625 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JD108_21630 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JD108_12350 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JD108_06015 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D JD108_13330 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JD108_05765 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JD108_11220 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:bcop00380]
D JD108_08935 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D JD108_08930 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D JD108_08925 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_18940 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D JD108_11220 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JD108_10995 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bcop00400]
D JD108_06520 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D JD108_12390 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D JD108_13285 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D JD108_14535 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D JD108_13380 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JD108_12340 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JD108_12395 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JD108_12380 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JD108_12375 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D JD108_12365 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D JD108_12370 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D JD108_12355 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JD108_12360 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JD108_12385 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D JD108_15395 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D JD108_12345 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JD108_15375 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D JD108_12350 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JD108_10895 aromatic amino acid hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:bcop00410]
D JD108_12070 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D JD108_12225 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D JD108_14050 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JD108_12230 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JD108_10820 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D JD108_10825 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D JD108_10830 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JD108_10835 acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D JD108_08890 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_20905 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D JD108_10795 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:bcop00430]
D JD108_09365 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JD108_10800 aspartate aminotransferase family protein K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D JD108_04090 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JD108_21335 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D JD108_12585 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:bcop00450]
D JD108_08340 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JD108_13680 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JD108_13675 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D JD108_21125 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D JD108_10665 PLP-dependent transferase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D JD108_04405 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JD108_16935 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JD108_19720 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JD108_08670 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JD108_16320 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JD108_00595 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bcop00460]
D JD108_18940 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D JD108_09365 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JD108_09700 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JD108_12580 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JD108_20775 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_06700 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_11675 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bcop00470]
D JD108_02530 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JD108_13330 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JD108_05765 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JD108_14315 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JD108_13505 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D JD108_02945 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JD108_15720 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JD108_08530 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JD108_05395 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D JD108_02035 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JD108_06775 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JD108_12830 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:bcop00480]
D JD108_09365 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JD108_13410 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D JD108_12045 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D JD108_05180 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JD108_16800 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JD108_08295 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D JD108_20960 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JD108_05880 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:bcop00542]
D JD108_20555 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bcop00541]
D JD108_20060 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JD108_11870 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JD108_11875 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JD108_11140 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JD108_11120 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JD108_00665 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JD108_20765 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JD108_16150 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D JD108_11410 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D JD108_11880 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:bcop00550]
D JD108_20610 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JD108_20855 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JD108_08550 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JD108_08545 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JD108_15510 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JD108_08530 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JD108_08520 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JD108_14315 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JD108_14310 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JD108_10005 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JD108_18715 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JD108_21540 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JD108_18540 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JD108_08525 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JD108_08540 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JD108_06555 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JD108_06155 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D JD108_20965 penicillin-binding protein 1A K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D JD108_08510 PASTA domain-containing protein K08724 pbpB; penicillin-binding protein 2B
D JD108_08515 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D JD108_12885 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_00115 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_11905 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_12800 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_12080 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JD108_09370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:bcop00552]
D JD108_18715 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JD108_21540 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JD108_18540 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JD108_20555 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JD108_20560 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D JD108_16060 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D JD108_02370 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D JD108_05370 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D JD108_07095 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D JD108_08675 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D JD108_01150 glycosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D JD108_06915 glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bcop00543]
D JD108_20555 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JD108_01220 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JD108_12665 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bcop00730]
D JD108_08025 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D JD108_13875 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D JD108_15870 ThiF family adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D JD108_16400 ThiF family adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D JD108_15170 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JD108_06790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JD108_06795 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JD108_18765 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D JD108_13145 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JD108_12110 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D JD108_10875 thiamine phosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D JD108_08085 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D JD108_10880 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D JD108_02590 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D JD108_05795 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JD108_09155 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JD108_21105 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D JD108_01470 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JD108_12105 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:bcop00740]
D JD108_04870 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JD108_04860 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JD108_04875 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D JD108_04865 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D JD108_10085 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JD108_08085 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D JD108_12965 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JD108_12425 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:bcop00750]
D JD108_08125 pdxK; pyridoxine/pyridoxal/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D JD108_15385 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JD108_00120 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D JD108_00125 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bcop00760]
D JD108_00855 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JD108_00820 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D JD108_00860 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D JD108_18915 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JD108_12930 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JD108_11860 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JD108_07905 nadR; multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D JD108_15590 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JD108_07190 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JD108_14525 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JD108_07040 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D JD108_14790 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D JD108_13135 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JD108_18745 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JD108_00260 PrpF protein K20451 mii; methylitaconate Delta-isomerase [EC:5.3.3.6]
D JD108_21550 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JD108_07950 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:bcop00770]
D JD108_16315 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JD108_19420 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JD108_16310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JD108_19415 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JD108_16305 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JD108_19410 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JD108_06230 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JD108_12235 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D JD108_04135 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JD108_08455 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JD108_12230 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JD108_17125 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D JD108_00865 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D JD108_09115 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D JD108_09495 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JD108_16720 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JD108_02515 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JD108_12650 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D JD108_16745 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JD108_10820 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D JD108_10825 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D JD108_10830 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JD108_10835 acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D JD108_08890 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D JD108_12070 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D JD108_12225 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:bcop00780]
D JD108_09555 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JD108_09545 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_10255 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_11170 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_11345 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_20565 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JD108_07260 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JD108_12240 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bcop00785]
D JD108_13335 lipoate--protein ligase family protein K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D JD108_04925 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D JD108_10370 lipoate--protein ligase family protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10545 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JD108_10550 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JD108_10555 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JD108_13010 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JD108_13005 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JD108_13000 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JD108_13345 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JD108_13340 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JD108_13350 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JD108_04365 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JD108_06715 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:bcop00790]
D JD108_12470 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D JD108_01095 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D JD108_01100 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JD108_01090 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JD108_05900 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JD108_15515 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D JD108_04870 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JD108_01060 pabA; aminodeoxychorismate/anthranilate synthase component II K25575 pabA; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component II [EC:2.6.1.123]
D JD108_01055 anthranilate synthase component I family protein K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D JD108_01085 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D JD108_08000 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D JD108_13840 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D JD108_10895 aromatic amino acid hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D JD108_08005 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D JD108_07995 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D JD108_06080 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D JD108_16350 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JD108_06430 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JD108_06425 moaD; molybdopterin converting factor subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D JD108_02630 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JD108_16250 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JD108_15825 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JD108_15830 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JD108_16355 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JD108_16360 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JD108_17585 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JD108_17610 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:bcop00670]
D JD108_05900 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JD108_19200 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D JD108_13170 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JD108_20775 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_06700 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_11675 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JD108_02965 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JD108_02980 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JD108_09130 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JD108_13350 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JD108_13680 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JD108_13675 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D JD108_05895 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JD108_03950 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D JD108_02625 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bcop00860]
D JD108_15650 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D JD108_15625 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JD108_18245 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JD108_05190 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JD108_15630 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JD108_15640 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D JD108_15570 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D JD108_15210 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D JD108_15560 hemY; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D JD108_15565 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D JD108_05545 heme-dependent peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D JD108_15635 uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D JD108_17290 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D JD108_17285 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D JD108_18970 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JD108_18965 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D JD108_17345 sirohydrochlorin chelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D JD108_17320 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D JD108_17350 cobJ; precorrin-3B C(17)-methyltransferase K21479 cbiH60; cobalt-factor III methyltransferase [EC:2.1.1.272]
D JD108_17315 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D JD108_17310 cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D JD108_17340 cobK; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D JD108_17330 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D JD108_17325 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D JD108_17335 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D JD108_17305 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D JD108_18195 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JD108_17380 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JD108_17300 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D JD108_17355 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D JD108_17370 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D JD108_11575 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D JD108_17365 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D JD108_17295 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D JD108_17375 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bcop00130]
D JD108_12430 UbiA family prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D JD108_12425 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D JD108_12435 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D JD108_06210 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D JD108_12420 menaquinone biosynthesis protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D JD108_05055 mqnE; aminofutalosine synthase MqnE K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D JD108_18565 futalosine hydrolase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D JD108_15885 mqnC; dehypoxanthine futalosine cyclase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D JD108_16415 mqnC; dehypoxanthine futalosine cyclase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D JD108_18560 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
D JD108_00300 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D JD108_06015 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bcop00900]
D JD108_13145 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JD108_10015 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D JD108_01205 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D JD108_00640 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JD108_01210 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D JD108_10025 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D JD108_04140 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_12425 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D JD108_12535 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D JD108_13155 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JD108_12440 heptaprenyl diphosphate synthase component 1 K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D JD108_12415 polyprenyl synthetase family protein K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D JD108_10005 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:bcop00906]
D JD108_14595 NAD(P)/FAD-dependent oxidoreductase K02293 PDS; 15-cis-phytoene desaturase [EC:1.3.5.5]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:bcop00907]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_04830 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JD108_08435 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JD108_04225 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JD108_06150 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D JD108_11120 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D JD108_14585 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:bcop00332]
D JD108_04190 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JD108_04185 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:bcop00261]
D JD108_16320 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JD108_16015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_03575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_06270 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_10130 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JD108_10125 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JD108_10135 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JD108_12265 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bcop00521]
D JD108_03230 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JD108_11610 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JD108_11585 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D JD108_06045 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JD108_06245 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JD108_11120 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JD108_03230 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D JD108_11120 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:bcop00401]
D JD108_12345 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JD108_12350 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D JD108_12380 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D JD108_09540 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JD108_09545 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_10255 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_11170 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_11345 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_07260 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JD108_09550 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bcop00999]
D JD108_20175 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JD108_14535 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:bcop00362]
D JD108_04225 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JD108_04220 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_16045 enoyl-CoA hydratase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17]
D JD108_20915 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JD108_21625 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JD108_21630 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:bcop00627]
D JD108_11220 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JD108_18940 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D JD108_10855 menaquinone biosynthesis decarboxylase K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61]
D JD108_12425 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D JD108_14065 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D JD108_14060 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D JD108_05700 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D JD108_05700 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D JD108_04225 acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:bcop00643]
D JD108_07005 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D JD108_11220 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JD108_18940 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
D JD108_11550 carboxyltransferase domain-containing protein K01941 uca; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation
D JD108_21640 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bcop03020]
D JD108_01290 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JD108_01295 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JD108_01500 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JD108_09110 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JD108_20885 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
D JD108_07155 helicase-associated domain-containing protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bcop03010]
D JD108_12540 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JD108_09985 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JD108_01395 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JD108_06590 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JD108_01450 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JD108_21990 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JD108_01330 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JD108_01435 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JD108_01535 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JD108_01360 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JD108_01495 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JD108_01325 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JD108_01490 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JD108_01430 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JD108_10990 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JD108_10090 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JD108_09610 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JD108_01410 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JD108_21980 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JD108_01385 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JD108_14465 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JD108_14305 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JD108_01270 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JD108_01380 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JD108_01365 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JD108_01370 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JD108_01425 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JD108_01440 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JD108_01280 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JD108_21965 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JD108_01275 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JD108_01265 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JD108_01530 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JD108_01415 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JD108_01460 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JD108_01400 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JD108_01505 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JD108_01445 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JD108_09635 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JD108_16335 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JD108_15425 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JD108_01390 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JD108_01375 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JD108_01420 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JD108_00675 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JD108_15415 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JD108_09195 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JD108_01405 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JD108_01455 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JD108_20830 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JD108_09520 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JD108_01250 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JD108_22105 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JD108_16340 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JD108_01485 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JD108_01320 50S ribosomal protein L7ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A
D JD108_14150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JD108_06810 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JD108_00425 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JD108_02710 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JD108_00095 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bcop00970]
D JD108_16645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_01135 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_01585 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_02700 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_02725 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_14145 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_00415 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_19615 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_00375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_01635 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_02810 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_05820 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_06880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_00145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_14110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_01600 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JD108_02740 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JD108_06825 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JD108_18140 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JD108_00340 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_02775 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_06850 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_11420 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_18115 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_19740 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_14115 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JD108_18085 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JD108_01625 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JD108_02790 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JD108_18095 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JD108_00325 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_01610 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_02760 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_06835 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_14100 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_18130 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_10940 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_00370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_02805 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_06875 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_18090 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_19730 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_00390 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_01645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_06895 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_08110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_14120 tRNA-His K14226 tRNA-His; tRNA His
D JD108_00410 tRNA-His K14226 tRNA-His; tRNA His
D JD108_18100 tRNA-His K14226 tRNA-His; tRNA His
D JD108_01130 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JD108_01580 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JD108_02695 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JD108_02720 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JD108_06890 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_02800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_00365 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_06870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_08100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_11430 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_00420 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_02755 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_14105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_00385 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_05830 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_18080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_00360 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JD108_01630 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JD108_02795 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JD108_06865 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JD108_19735 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JD108_00335 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_00400 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_02750 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_02770 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_06845 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_07325 tRNA-Ile K14230 tRNA-Met; tRNA Met
D JD108_14130 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_18120 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_00345 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JD108_02780 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JD108_18110 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JD108_01640 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_05825 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_06885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_00380 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_08105 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_12460 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_12465 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_02745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_14135 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_00320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_08095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_18135 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_00290 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_00395 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_14035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_00350 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_02785 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_06855 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_11425 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_01605 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_06830 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_00405 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JD108_14125 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JD108_18105 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JD108_00355 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JD108_01620 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JD108_06860 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JD108_00330 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_07330 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_01615 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_02765 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_06840 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_18125 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_01215 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JD108_03190 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JD108_03195 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JD108_03185 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JD108_21165 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D JD108_15130 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JD108_12125 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JD108_15200 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JD108_11100 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JD108_14225 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JD108_14220 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JD108_15875 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JD108_16405 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JD108_00130 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JD108_01225 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JD108_00595 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JD108_09130 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JD108_15520 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JD108_14505 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JD108_08645 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JD108_01120 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JD108_13700 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JD108_18220 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JD108_10030 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JD108_15205 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JD108_16190 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JD108_16185 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JD108_06565 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JD108_17085 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bcop03060]
D JD108_01465 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JD108_01255 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JD108_19535 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JD108_15260 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JD108_15265 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D JD108_15295 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JD108_22090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JD108_20000 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JD108_09605 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JD108_09570 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JD108_01075 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JD108_02640 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JD108_01080 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D JD108_02645 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D JD108_06305 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JD108_09380 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JD108_09640 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JD108_08825 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JD108_02275 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D JD108_02295 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bcop04122]
D JD108_15170 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JD108_06790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JD108_13625 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JD108_20340 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D JD108_11075 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JD108_06425 moaD; molybdopterin converting factor subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D JD108_16350 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JD108_15835 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D JD108_16365 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D JD108_06420 ThiF family adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D JD108_06430 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JD108_02630 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JD108_16250 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JD108_06795 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JD108_12115 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D JD108_15870 ThiF family adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D JD108_16400 ThiF family adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bcop03018]
D JD108_19570 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JD108_10095 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JD108_19525 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JD108_21340 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JD108_05975 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JD108_10290 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JD108_21455 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JD108_01700 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JD108_12615 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JD108_20845 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JD108_10305 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JD108_02345 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JD108_10155 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JD108_16835 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JD108_14365 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JD108_01315 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D JD108_02665 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JD108_10425 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bcop03030]
D JD108_16865 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JD108_10035 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JD108_00500 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JD108_00560 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JD108_14470 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JD108_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JD108_21960 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JD108_14205 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JD108_21985 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JD108_18065 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JD108_09650 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JD108_16730 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JD108_03150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bcop03410]
D JD108_21110 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JD108_18335 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JD108_16725 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JD108_21085 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JD108_16590 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JD108_19240 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JD108_13670 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D JD108_19280 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JD108_13635 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JD108_13710 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JD108_08310 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JD108_16730 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JD108_15250 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JD108_03150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bcop03420]
D JD108_00690 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JD108_19860 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JD108_19865 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JD108_16020 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JD108_14985 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_16535 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_03145 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_07265 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_10500 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_16730 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JD108_03150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JD108_07155 helicase-associated domain-containing protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:bcop03430]
D JD108_10400 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JD108_16160 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D JD108_10405 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D JD108_14985 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_16535 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_03145 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_07265 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_10500 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_13165 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JD108_13160 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JD108_15250 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JD108_21985 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JD108_16865 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JD108_10035 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JD108_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JD108_00500 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JD108_14470 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JD108_00560 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JD108_03150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bcop03440]
D JD108_15250 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JD108_21985 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JD108_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JD108_14230 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JD108_00510 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JD108_10295 recA; recombinase RecA K03553 recA; recombination protein RecA
D JD108_16730 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JD108_15335 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JD108_15330 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JD108_15340 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JD108_09255 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JD108_09750 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JD108_15160 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D JD108_16865 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JD108_10035 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JD108_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JD108_00500 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JD108_14470 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JD108_00560 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JD108_09120 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:bcop03450]
D JD108_09480 Ku protein K10979 ku; DNA end-binding protein Ku
D JD108_09445 ligD; non-homologous end-joining DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bcop02010]
D JD108_11275 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JD108_11280 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D JD108_11285 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D JD108_11290 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JD108_15855 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D JD108_16385 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D JD108_15860 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D JD108_16390 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D JD108_15865 phosphate ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D JD108_16395 phosphate ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D JD108_12090 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D JD108_12095 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D JD108_12100 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D JD108_13395 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D JD108_13400 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D JD108_13405 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D JD108_18585 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JD108_05630 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JD108_18580 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JD108_05640 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JD108_18575 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JD108_05635 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JD108_17640 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JD108_05755 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JD108_08940 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JD108_05750 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D JD108_17630 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D JD108_05745 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D JD108_17625 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JD108_05740 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JD108_21370 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D JD108_21375 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D JD108_07965 osmoprotectant ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D JD108_07960 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D JD108_07970 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D JD108_07955 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JD108_13935 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JD108_16980 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JD108_02670 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JD108_16975 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D JD108_02675 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D JD108_16970 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D JD108_02680 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D JD108_21240 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D JD108_10185 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JD108_21230 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JD108_10195 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JD108_21225 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JD108_10200 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JD108_21235 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JD108_10190 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JD108_21185 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D JD108_21195 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D JD108_21190 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D JD108_21200 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D JD108_02465 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JD108_02470 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JD108_02475 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JD108_02480 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JD108_20010 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein
D JD108_04320 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D JD108_06070 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JD108_06075 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JD108_06065 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D JD108_06060 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D JD108_09170 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D JD108_09175 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D JD108_09180 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D JD108_07755 transporter substrate-binding domain-containing protein K17073 lysX1; putative lysine transport system substrate-binding protein
D JD108_07760 amino acid ABC transporter permease K17074 lysX2; putative lysine transport system permease protein
D JD108_07765 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D JD108_19625 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_21580 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_03085 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_05400 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_08970 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_10225 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_21600 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_03020 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_08985 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_10230 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_21595 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JD108_03025 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JD108_08990 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JD108_10235 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_21590 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_03030 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_08975 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_21585 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_03035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_08980 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_10240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_02405 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JD108_02400 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JD108_02395 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JD108_12915 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_14580 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_17140 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02410 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02420 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02430 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_08060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_15750 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_12910 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_08065 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_15745 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_12905 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_08070 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_12900 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_15740 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_08075 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_12895 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_15735 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_17410 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_15765 peptide ABC transporter substrate-binding protein K16199 dppE; dipeptide transport system substrate-binding protein
D JD108_00835 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D JD108_00845 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D JD108_00840 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JD108_13890 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D JD108_13900 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D JD108_13905 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D JD108_13895 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D JD108_04105 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D JD108_04100 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D JD108_04110 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D JD108_04115 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D JD108_18460 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JD108_21145 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JD108_01520 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JD108_11360 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JD108_21155 ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_01510 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_11350 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_21150 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_01515 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_11355 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_03220 ABC transporter permease K09696 natB; sodium transport system permease protein
D JD108_03215 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D JD108_05505 ATP-binding cassette domain-containing protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D JD108_19900 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JD108_19905 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JD108_04290 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JD108_04295 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:bcop02060]
D JD108_00210 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D JD108_00215 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JD108_00205 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D JD108_00765 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JD108_00760 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:bcop03070]
D JD108_15265 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D JD108_15260 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JD108_01255 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JD108_19535 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JD108_01465 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JD108_15295 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JD108_22090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JD108_20000 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JD108_09570 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JD108_09605 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JD108_01075 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JD108_02640 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JD108_01080 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D JD108_02645 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D JD108_03535 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bcop02020]
D JD108_16785 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JD108_16790 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D JD108_02465 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JD108_03090 HAMP domain-containing histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D JD108_03095 response regulator transcription factor K07770 cssR; two-component system, OmpR family, response regulator CssR
D JD108_20100 flagellin K02406 fliC; flagellin
D JD108_09960 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D JD108_18860 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D JD108_20025 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D JD108_03595 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JD108_03625 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JD108_03590 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JD108_03610 kdpA; potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D JD108_03615 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D JD108_03620 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D JD108_13990 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JD108_00250 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JD108_02270 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JD108_05335 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JD108_09720 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JD108_13995 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JD108_00245 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JD108_02265 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JD108_05330 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JD108_09715 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JD108_14000 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JD108_00240 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JD108_02260 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JD108_09710 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JD108_12755 HAMP domain-containing protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D JD108_12760 response regulator transcription factor K07775 resD; two-component system, OmpR family, response regulator ResD
D JD108_18965 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D JD108_21930 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D JD108_21935 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D JD108_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JD108_11405 response regulator transcription factor K10697 rpaA; two-component system, OmpR family, response regulator RpaA
D JD108_02875 HAMP domain-containing histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D JD108_02870 response regulator transcription factor K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D JD108_02880 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D JD108_02885 ABC transporter permease K11636 yxdM; putative ABC transport system permease protein
D JD108_17385 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JD108_09370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JD108_03140 VanW family protein K18346 vanW; vancomycin resistance protein VanW
D JD108_19995 S8 family serine peptidase K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D JD108_05380 S8 family serine peptidase K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D JD108_10900 PAS domain-containing protein K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D JD108_05945 HAMP domain-containing histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D JD108_12120 kinase K06347 kapB; kinase-associated protein B
D JD108_20870 response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D JD108_15410 Spo0B domain-containing protein K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
D JD108_13110 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D JD108_17180 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D JD108_17150 sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D JD108_17145 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D JD108_16860 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JD108_03215 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D JD108_03220 ABC transporter permease K09696 natB; sodium transport system permease protein
D JD108_19840 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D JD108_20105 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D JD108_20165 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D JD108_20160 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D JD108_03810 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JD108_03815 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D JD108_03805 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D JD108_18410 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D JD108_18405 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D JD108_18415 cell wall-active antibiotics response protein K11622 liaF; lia operon protein LiaF
D JD108_02095 PAS domain S-box protein K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D JD108_02100 response regulator transcription factor K07696 nreC; two-component system, NarL family, response regulator NreC
D JD108_00930 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA
D JD108_01890 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D JD108_00905 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D JD108_01850 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D JD108_01855 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D JD108_07795 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D JD108_00915 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_00980 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_01860 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_03430 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_00920 type II secretion system F family protein K12510 tadB; tight adherence protein B
D JD108_01865 type II secretion system F family protein K12510 tadB; tight adherence protein B
D JD108_00925 type II secretion system F family protein K12511 tadC; tight adherence protein C
D JD108_01870 type II secretion system F family protein K12511 tadC; tight adherence protein C
D JD108_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_10455 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_00495 PAS domain-containing protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D JD108_18845 atoS; two-component system sensor histidine kinase AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D JD108_18840 sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D JD108_14065 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D JD108_14060 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D JD108_18835 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_19610 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JD108_17780 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D JD108_03880 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JD108_12405 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JD108_12890 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_15655 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_15950 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_17615 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_18310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_18875 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_19210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_19340 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_21175 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_21245 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_21730 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_02930 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_05300 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_05960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_05995 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_10845 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_07215 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JD108_09940 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JD108_09935 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JD108_04080 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JD108_09885 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JD108_09930 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JD108_17240 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D JD108_17235 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D JD108_17230 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D JD108_04845 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D JD108_18685 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D JD108_18680 response regulator K07719 glnL; two-component system, response regulator GlnL
D JD108_13505 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D JD108_06310 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D JD108_01995 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JD108_02325 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JD108_01990 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JD108_02330 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JD108_18850 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D JD108_20765 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JD108_16150 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D JD108_20135 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D JD108_01650 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bcop02024]
D JD108_10425 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D JD108_12380 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JD108_03590 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JD108_03060 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JD108_03075 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D JD108_03070 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D JD108_03065 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D JD108_19625 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_21580 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_03085 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_05400 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_08970 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_10225 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_21600 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_03020 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_08985 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_10230 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_21595 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JD108_03025 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JD108_08990 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JD108_10235 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_21590 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_03030 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_08975 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_21585 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_03035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_08980 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_10240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_16055 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JD108_05375 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JD108_04860 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JD108_19840 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D JD108_12915 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_14580 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_17140 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02410 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02420 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02430 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_08060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_15750 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_12910 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_08065 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_15745 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_12905 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_08070 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_12900 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_15740 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_08075 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_12895 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_15735 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_17410 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_14435 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JD108_17390 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JD108_06195 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JD108_10760 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JD108_11685 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JD108_14430 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_15975 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_17395 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_06200 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_10765 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_11690 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_14425 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_15970 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_17400 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_06205 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_10770 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_11695 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_14445 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JD108_17405 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JD108_06220 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JD108_10775 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JD108_11700 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JD108_14440 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JD108_06225 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JD108_10780 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JD108_11705 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JD108_22090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JD108_15265 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D JD108_01255 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JD108_19535 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JD108_01465 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JD108_15295 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JD108_20000 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JD108_09570 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JD108_09605 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JD108_20160 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D JD108_20870 response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D JD108_15410 Spo0B domain-containing protein K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
D JD108_13110 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D JD108_19995 S8 family serine peptidase K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D JD108_05380 S8 family serine peptidase K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bcop02030]
D JD108_12890 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_15655 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_15950 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_17615 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_18310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_18875 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_19210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_19340 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_21175 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_21245 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_21730 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_02930 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_05300 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_05960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_05995 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_10845 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_09935 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JD108_07215 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JD108_09940 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JD108_04080 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JD108_09885 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JD108_09945 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D JD108_15980 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D JD108_09930 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JD108_09950 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D JD108_03880 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JD108_12405 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JD108_09825 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JD108_09875 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JD108_09880 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D JD108_18860 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D JD108_20025 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D JD108_18855 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JD108_20020 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bcop02040]
D JD108_09815 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JD108_09820 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JD108_09825 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JD108_09830 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JD108_09835 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JD108_09840 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D JD108_09850 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D JD108_09870 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D JD108_09875 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JD108_09880 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D JD108_09890 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JD108_09895 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JD108_09900 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JD108_09905 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JD108_09915 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JD108_09910 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JD108_09805 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JD108_09810 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JD108_19870 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D JD108_09860 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D JD108_20585 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D JD108_20580 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D JD108_20125 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JD108_20120 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JD108_20100 flagellin K02406 fliC; flagellin
D JD108_20085 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D JD108_06975 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D JD108_20080 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D JD108_18860 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D JD108_20025 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D JD108_18855 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JD108_20020 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JD108_20135 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D JD108_06070 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JD108_06075 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JD108_14200 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JD108_01035 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JD108_01695 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor
D JD108_19610 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JD108_09960 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JD108_19570 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:bcop04980]
D JD108_18195 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JD108_20900 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D JD108_13680 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bcop01501]
D JD108_02060 glycoside hydrolase family 3 C-terminal domain-containing protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JD108_05690 glycoside hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JD108_12915 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_14580 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_17140 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02410 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02420 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02430 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_08060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_15750 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_12910 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_08065 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_15745 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_12905 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_08070 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_12900 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_15740 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_08075 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_12895 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_15735 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_17410 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_14585 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JD108_06555 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JD108_06155 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:bcop01502]
D JD108_17385 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JD108_14315 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JD108_02530 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JD108_14310 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JD108_08525 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JD108_08540 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JD108_09370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JD108_03140 VanW family protein K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bcop01503]
D JD108_15220 SH3 domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_16735 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_18390 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_01540 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_02450 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_06580 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bcop01000]
C 01001 Protein kinases [BR:bcop01001]
D JD108_09150 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JD108_02545 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D JD108_02560 rsbW; anti-sigma B factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D JD108_00785 protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D JD108_16785 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JD108_03090 HAMP domain-containing histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D JD108_03595 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JD108_03625 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JD108_12755 HAMP domain-containing protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D JD108_21930 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D JD108_02875 HAMP domain-containing histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D JD108_20165 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D JD108_03810 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JD108_18410 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D JD108_02095 PAS domain S-box protein K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D JD108_10900 PAS domain-containing protein K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D JD108_05945 HAMP domain-containing histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D JD108_17150 sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D JD108_02250 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D JD108_06020 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D JD108_00495 PAS domain-containing protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D JD108_18845 atoS; two-component system sensor histidine kinase AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D JD108_09935 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JD108_18685 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bcop01009]
D JD108_08490 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JD108_16835 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JD108_09145 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:bcop01002]
D JD108_08825 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JD108_07785 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JD108_01895 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D JD108_14460 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D JD108_08590 spoIIGA; sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D JD108_02830 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JD108_13615 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D JD108_14575 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D JD108_03645 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JD108_02955 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JD108_01685 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JD108_13730 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JD108_14490 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JD108_05855 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D JD108_19840 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D JD108_00515 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JD108_03925 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JD108_12610 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JD108_22000 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D JD108_11145 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D JD108_09370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JD108_17385 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JD108_05180 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JD108_10320 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D JD108_03080 M20 family metallopeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D JD108_15755 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JD108_05970 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JD108_11375 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JD108_12975 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D JD108_19680 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D JD108_03895 amidohydrolase K01436 yhaA; amidohydrolase [EC:3.5.1.-]
D JD108_05455 amidohydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A
D JD108_06215 M20 peptidase aminoacylase family protein K14665 amhX; amidohydrolase [EC:3.5.1.-]
D JD108_08190 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D JD108_03905 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D JD108_11300 M20 family metallo-hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D JD108_17035 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D JD108_04895 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D JD108_10205 peptidoglycan DD-metalloendopeptidase family protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D JD108_01475 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JD108_07035 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JD108_13280 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JD108_13325 hypothetical protein K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D JD108_02445 M28 family peptidase K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D JD108_18470 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D JD108_21035 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D JD108_02920 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D JD108_06490 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D JD108_09395 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D JD108_13660 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D JD108_12180 AAA family ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JD108_00810 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JD108_18205 M42 family metallopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D JD108_15435 M50 family metallopeptidase K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D JD108_10020 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D JD108_16140 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D JD108_04770 M67 family metallopeptidase K20110 JAMM1; desampylase [EC:3.4.19.15]
D JD108_02300 hypothetical protein K06336 tasA; spore coat-associated protein N
D JD108_02305 hypothetical protein K06336 tasA; spore coat-associated protein N
D JD108_12575 prsW; intramembrane metalloprotease PrsW K24131 prsW; protease PrsW [EC:3.4.-.-]
D JD108_05775 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D JD108_15990 S8 family serine peptidase K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D JD108_19995 S8 family serine peptidase K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D JD108_05380 S8 family serine peptidase K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D JD108_12885 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_00115 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_11905 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_12800 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_12080 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JD108_15690 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JD108_19655 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JD108_02175 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JD108_15675 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D JD108_15680 lonB; ATP-dependent protease LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D JD108_09510 PDZ domain-containing protein K07177 K07177; Lon-like protease
D JD108_10480 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JD108_06305 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JD108_09380 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JD108_09640 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JD108_02275 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D JD108_02295 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D JD108_14165 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D JD108_19890 peptidoglycan-binding protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D JD108_13120 spoIVB; SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D JD108_17135 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D JD108_04580 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D JD108_09790 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D JD108_09365 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JD108_21170 ggt; gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D JD108_05940 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:bcop01003]
D JD108_01150 glycosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D JD108_06915 glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D JD108_06555 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JD108_06155 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D JD108_20965 penicillin-binding protein 1A K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D JD108_20560 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D JD108_20555 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bcop01005]
D JD108_20555 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bcop01011]
D JD108_20610 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JD108_20855 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JD108_08550 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JD108_08545 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JD108_15510 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JD108_08530 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JD108_08520 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JD108_14315 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JD108_02530 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JD108_15720 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JD108_17135 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D JD108_08525 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JD108_08540 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JD108_18715 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JD108_21540 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JD108_18540 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JD108_16105 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JD108_06555 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JD108_06155 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D JD108_20965 penicillin-binding protein 1A K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D JD108_08510 PASTA domain-containing protein K08724 pbpB; penicillin-binding protein 2B
D JD108_08515 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D JD108_06345 penicillin-binding transpeptidase domain-containing protein K21467 pbpC; penicillin-binding protein 3
D JD108_15095 penicillin-binding protein 2 K21468 pbpI; penicillin-binding protein 4B
D JD108_12885 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_00115 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_11905 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_12800 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JD108_12080 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JD108_17385 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JD108_09370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JD108_03645 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JD108_04895 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D JD108_10205 peptidoglycan DD-metalloendopeptidase family protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D JD108_16715 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D JD108_15110 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D JD108_13480 sleB; spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D JD108_06950 sleB; spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D JD108_15310 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D JD108_20605 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D JD108_15220 SH3 domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_16735 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_18390 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_01540 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_02450 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_06580 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:bcop01004]
D JD108_09540 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JD108_15505 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JD108_08965 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JD108_09535 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JD108_09555 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JD108_09545 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_10255 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_11170 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_11345 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JD108_20565 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JD108_07260 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JD108_18300 fabL; enoyl-[acyl-carrier-protein] reductase FabL K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D JD108_03805 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D JD108_13920 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_11475 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JD108_16055 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JD108_05375 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JD108_14025 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JD108_08955 menE; o-succinylbenzoate--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JD108_11180 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JD108_09530 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JD108_12520 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JD108_12545 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:bcop01008]
D JD108_09410 type III polyketide synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D JD108_09405 hypothetical protein K16168 bpsB; methyltransferase
C 01006 Prenyltransferases [BR:bcop01006]
D JD108_13155 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JD108_12440 heptaprenyl diphosphate synthase component 1 K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D JD108_12415 polyprenyl synthetase family protein K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D JD108_10005 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JD108_10420 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JD108_12430 UbiA family prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D JD108_18970 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bcop01007]
D JD108_21165 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D JD108_01215 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JD108_06565 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JD108_17085 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JD108_01225 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JD108_13700 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JD108_00595 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JD108_08645 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JD108_15520 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JD108_14505 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JD108_01120 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JD108_15200 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JD108_11100 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JD108_15205 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JD108_14225 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JD108_14220 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JD108_00130 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JD108_18220 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JD108_10030 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JD108_15875 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JD108_16405 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JD108_15130 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JD108_12125 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JD108_16190 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JD108_16185 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JD108_06440 pyridoxal phosphate-dependent aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D JD108_04350 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D JD108_17845 aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D JD108_12350 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JD108_11500 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JD108_13520 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D JD108_19960 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JD108_08185 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JD108_14050 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JD108_17670 putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D JD108_10800 aspartate aminotransferase family protein K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D JD108_15625 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JD108_18245 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JD108_05190 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JD108_13330 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JD108_05765 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JD108_16745 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bcop00194]
D JD108_20685 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JD108_20690 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JD108_20695 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JD108_20700 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JD108_20705 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JD108_20710 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JD108_20715 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JD108_20720 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bcop03000]
D JD108_13690 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D JD108_16085 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D JD108_16570 methylphosphotriester-DNA--protein-cysteine methyltransferase family protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D JD108_21330 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D JD108_02195 LysR family transcriptional regulator K19242 citR; LysR family transcriptional regulator, repressor for citA
D JD108_17115 LysR family transcriptional regulator K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD
D JD108_00755 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D JD108_20595 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D JD108_14215 helix-turn-helix transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D JD108_05725 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JD108_06530 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JD108_10180 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D JD108_16855 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D JD108_21700 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D JD108_16255 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D JD108_19145 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D JD108_03040 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D JD108_05265 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D JD108_16050 TetR/AcrR family transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D JD108_12920 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D JD108_15965 response regulator transcription factor K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
D JD108_02015 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D JD108_10450 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D JD108_11835 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D JD108_12950 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JD108_00850 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D JD108_18175 perR; peroxide-responsive transcriptional repressor PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D JD108_03055 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D JD108_15175 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D JD108_00065 winged helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D JD108_00455 winged helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D JD108_02500 winged helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D JD108_13910 helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D JD108_05840 helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D JD108_17070 winged helix-turn-helix transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D JD108_05735 PadR family transcriptional regulator K26741 ladR; PadR family transcriptional regulator, multidrug transcriptional repressor LadR
D JD108_15585 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D JD108_13310 mntR; transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D JD108_12240 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JD108_07905 nadR; multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D JD108_21385 GbsR/MarR family transcriptional regulator K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator
D JD108_00645 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D JD108_14940 sigma 54-interacting transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D JD108_19105 helix-turn-helix domain-containing protein K02647 cdaR; carbohydrate diacid regulator
D JD108_13525 sigma-54-dependent transcriptional regulator K06714 rocR; arginine utilization regulatory protein
D JD108_19665 sigma 54-interacting transcriptional regulator K06714 rocR; arginine utilization regulatory protein
D JD108_20935 sigma 54-interacting transcriptional regulator K06714 rocR; arginine utilization regulatory protein
D JD108_12205 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D JD108_06720 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D JD108_09800 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D JD108_14705 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D JD108_11710 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D JD108_02535 CopG family ribbon-helix-helix protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D JD108_00220 transcription antiterminator K03480 glcT; transcriptional antiterminator
D JD108_06525 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D JD108_14075 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D JD108_08885 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D JD108_10790 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D JD108_00590 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D JD108_00700 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D JD108_22050 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JD108_22060 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JD108_03405 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JD108_21500 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D JD108_21210 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D JD108_13130 argR; transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D JD108_14375 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D JD108_12105 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D JD108_10875 thiamine phosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D JD108_01160 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D JD108_21605 paaX; phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D JD108_19600 hypothetical protein K05311 cggR; central glycolytic genes regulator
D JD108_04065 BMP family ABC transporter substrate-binding protein K05519 med; transcriptional activator of comK gene
D JD108_12450 mtrB; trp RNA-binding attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D JD108_08840 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JD108_05270 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D JD108_16700 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D JD108_08495 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:bcop03021]
D JD108_07155 helicase-associated domain-containing protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JD108_01500 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JD108_01290 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JD108_01295 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JD108_20885 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D JD108_09110 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JD108_14200 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JD108_01035 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JD108_01695 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor
D JD108_05080 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_03635 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_14395 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_18260 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_19640 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_21510 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_01345 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_01660 sigW; RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_07690 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_09590 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_14480 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_07150 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_02865 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_10670 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JD108_02565 sigB; RNA polymerase sigma factor SigB K03090 sigB; RNA polymerase sigma-B factor
D JD108_12870 sigF; RNA polymerase sporulation sigma factor SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D JD108_14935 sigK; RNA polymerase sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D JD108_04540 sigma-70 family RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D JD108_07445 sigma-70 family RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D JD108_08595 sigE; RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D JD108_08600 sigG; RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D JD108_01245 sigH; RNA polymerase sporulation sigma factor SigH K27000 sigH; RNA polymerase sigma-H factor
D JD108_19610 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JD108_09960 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D JD108_10045 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JD108_13180 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JD108_01260 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JD108_02545 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D JD108_15535 serine/threonine-protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D JD108_02550 PP2C family protein-serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D JD108_02555 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D JD108_02560 rsbW; anti-sigma B factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D JD108_14825 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D JD108_01115 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D JD108_20845 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bcop03019]
D JD108_15430 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D JD108_09560 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JD108_02345 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JD108_10155 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JD108_10305 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JD108_19525 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JD108_07065 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D JD108_21340 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JD108_05975 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JD108_10290 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JD108_21455 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JD108_01700 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JD108_12615 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JD108_19570 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JD108_10095 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JD108_20845 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JD108_16835 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JD108_14365 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JD108_01315 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D JD108_02665 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JD108_10425 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D JD108_20105 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D JD108_19715 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:bcop03011]
D JD108_12540 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JD108_09985 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JD108_01395 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JD108_06590 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JD108_01450 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JD108_21990 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JD108_01330 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JD108_01435 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JD108_01535 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JD108_01360 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JD108_01495 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JD108_01325 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JD108_01490 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JD108_01430 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JD108_10990 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JD108_10090 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JD108_09610 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JD108_01410 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JD108_21980 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JD108_01385 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JD108_14465 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JD108_14305 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JD108_01270 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JD108_01380 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JD108_01365 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JD108_01370 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JD108_01425 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JD108_01440 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JD108_21965 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JD108_01275 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JD108_01265 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JD108_01280 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JD108_01530 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JD108_01415 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JD108_01460 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JD108_01400 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JD108_01505 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JD108_01445 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JD108_09635 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JD108_16335 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JD108_15425 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JD108_01390 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JD108_01375 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JD108_01420 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JD108_15415 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JD108_09195 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JD108_01405 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JD108_01455 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JD108_20830 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JD108_09520 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JD108_01250 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JD108_22105 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JD108_16340 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JD108_01485 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JD108_00675 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JD108_01320 50S ribosomal protein L7ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A
D JD108_00095 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JD108_14150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JD108_06810 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JD108_00425 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JD108_02710 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bcop03009]
D JD108_09560 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JD108_14240 era; GTPase Era K03595 era; GTPase
D JD108_15405 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D JD108_10045 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JD108_13180 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JD108_01260 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JD108_00285 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D JD108_00620 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JD108_09135 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D JD108_01285 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D JD108_09490 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JD108_14350 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JD108_22070 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JD108_08500 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JD108_00585 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JD108_13140 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D JD108_16145 hypothetical protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D JD108_01235 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JD108_21880 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D JD108_09140 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JD108_03240 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D JD108_12780 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JD108_21025 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JD108_06995 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JD108_08830 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JD108_11205 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JD108_02605 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D JD108_08175 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D JD108_04285 GNAT family N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D JD108_09625 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D JD108_10275 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D JD108_14355 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D JD108_16070 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D JD108_15430 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D JD108_15120 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D JD108_01230 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D JD108_21340 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JD108_05975 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JD108_10290 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JD108_05795 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JD108_09155 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JD108_12525 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D JD108_09645 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D JD108_10440 hflX; GTPase HflX K03665 hflX; GTPase
D JD108_14540 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D JD108_20800 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JD108_15240 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JD108_10070 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D JD108_10040 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D JD108_00015 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D JD108_14515 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D JD108_14260 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D JD108_14530 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D JD108_20005 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D JD108_21995 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D JD108_09515 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:bcop03016]
D JD108_13580 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D JD108_12245 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D JD108_18220 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JD108_10030 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JD108_08645 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JD108_14505 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JD108_00595 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JD108_21165 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D JD108_13700 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JD108_01120 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JD108_15200 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JD108_15130 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JD108_12125 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JD108_11100 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JD108_15875 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JD108_16405 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JD108_00130 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JD108_01225 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JD108_15520 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JD108_15205 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JD108_16190 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JD108_16185 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JD108_06565 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JD108_17085 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JD108_15235 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D JD108_05230 alanyl-tRNA editing protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D JD108_11520 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JD108_06180 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D JD108_01525 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JD108_10080 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JD108_15170 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JD108_06790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JD108_20800 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JD108_10420 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JD108_22080 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D JD108_22075 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JD108_22100 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JD108_13735 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D JD108_15710 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D JD108_07205 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D JD108_09040 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D JD108_14225 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JD108_14220 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JD108_01215 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JD108_00235 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D JD108_01110 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D JD108_10380 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D JD108_14345 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D JD108_09780 trmFO; FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D JD108_09630 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JD108_14180 tRNA (adenine-N(1))-methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D JD108_18035 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D JD108_16205 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D JD108_11075 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JD108_20340 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D JD108_18805 (Fe-S)-binding protein K13628 iscA; iron-sulfur cluster assembly protein
D JD108_05065 erpA; iron-sulfur cluster insertion protein ErpA K13628 iscA; iron-sulfur cluster assembly protein
D JD108_15305 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D JD108_07995 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D JD108_08000 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D JD108_08005 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D JD108_06080 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D JD108_18060 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D JD108_15300 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D JD108_06795 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JD108_00800 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JD108_02600 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JD108_02610 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JD108_02595 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D JD108_15190 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D JD108_19525 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JD108_10095 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bcop03012]
D JD108_10060 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JD108_16345 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JD108_02620 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D JD108_09990 elongation factor Ts K02357 tsf; elongation factor Ts
D JD108_01340 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JD108_01335 fusA; elongation factor G K02355 fusA; elongation factor G
D JD108_20815 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JD108_10000 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D JD108_20810 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JD108_00680 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JD108_01480 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JD108_13275 efp; elongation factor P K02356 efp; elongation factor P
D JD108_19985 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D JD108_13655 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:bcop03110]
D JD108_01175 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JD108_15685 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JD108_09795 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D JD108_14365 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JD108_01315 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D JD108_02665 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JD108_14360 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JD108_01040 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D JD108_14370 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JD108_02660 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JD108_12180 AAA family ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JD108_00810 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JD108_20720 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JD108_15990 S8 family serine peptidase K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D JD108_12820 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D JD108_19025 SurA N-terminal domain-containing protein K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D JD108_00695 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D JD108_16030 trxA; thioredoxin K03671 TXN; thioredoxin
D JD108_20370 trxA; thioredoxin K03671 TXN; thioredoxin
D JD108_20995 thioredoxin family protein K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
C 04131 Membrane trafficking [BR:bcop04131]
D JD108_12410 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JD108_04765 flotillin family protein K07192 FLOT; flotillin
D JD108_19590 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JD108_16830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:bcop03032]
D JD108_18065 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JD108_12475 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JD108_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JD108_21960 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JD108_14205 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JD108_16695 DnaD domain protein K03346 dnaB; replication initiation and membrane attachment protein
D JD108_16690 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D JD108_21985 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JD108_16865 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JD108_10035 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JD108_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JD108_14470 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JD108_00560 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JD108_00500 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JD108_09650 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JD108_16730 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JD108_03150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JD108_11930 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
D JD108_00080 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JD108_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JD108_10725 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JD108_10720 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JD108_09775 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JD108_21535 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D JD108_08680 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bcop03036]
D JD108_09560 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JD108_04765 flotillin family protein K07192 FLOT; flotillin
D JD108_12475 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JD108_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JD108_17130 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D JD108_17675 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D JD108_10425 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D JD108_09565 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D JD108_12810 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D JD108_12805 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D JD108_08575 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JD108_00740 septum formation initiator family protein K13052 divIC; cell division protein DivIC
D JD108_19905 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JD108_10175 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JD108_08555 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D JD108_13465 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D JD108_08535 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D JD108_19900 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JD108_08580 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JD108_16180 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D JD108_15220 SH3 domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_16735 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_18390 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_01540 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_02450 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_06580 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JD108_06630 TPM domain-containing protein K06286 ezrA; septation ring formation regulator
D JD108_15460 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D JD108_15455 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D JD108_00910 AAA family ATPase K03609 minD; septum site-determining protein MinD
D JD108_08640 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D JD108_08625 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D JD108_15480 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JD108_20590 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JD108_15475 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D JD108_15470 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D JD108_22055 ParA family protein K03496 parA; chromosome partitioning protein
D JD108_03400 ParA family protein K03496 parA; chromosome partitioning protein
D JD108_22050 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JD108_22060 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JD108_03405 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JD108_10725 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JD108_10720 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JD108_22075 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JD108_22070 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JD108_09780 trmFO; FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D JD108_20235 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC
D JD108_20520 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC
D JD108_09785 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D JD108_12940 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D JD108_14780 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D JD108_20450 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D JD108_04730 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D JD108_07635 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D JD108_00710 mazG; nucleoside triphosphate pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D JD108_01545 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JD108_21790 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D JD108_15670 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
D JD108_19705 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:bcop03400]
D JD108_18055 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JD108_21110 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JD108_18335 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JD108_07155 helicase-associated domain-containing protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JD108_16540 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JD108_06140 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JD108_08665 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JD108_11265 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JD108_16570 methylphosphotriester-DNA--protein-cysteine methyltransferase family protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D JD108_16575 methylated-DNA--[protein]-cysteine S-methyltransferase K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JD108_13670 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D JD108_19280 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JD108_16590 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JD108_19240 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JD108_16725 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JD108_21085 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JD108_13635 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JD108_13710 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JD108_08310 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JD108_15250 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JD108_03150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JD108_16730 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JD108_19860 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JD108_19865 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JD108_16020 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JD108_14985 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_16535 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_03145 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_07265 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_10500 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JD108_01290 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JD108_01295 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JD108_01500 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JD108_20885 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D JD108_09110 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JD108_00690 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JD108_10400 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JD108_16160 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D JD108_10405 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D JD108_13165 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JD108_13160 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JD108_16865 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JD108_10035 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JD108_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JD108_14470 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JD108_00560 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JD108_00500 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JD108_21985 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JD108_15160 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D JD108_10295 recA; recombinase RecA K03553 recA; recombination protein RecA
D JD108_15335 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JD108_15330 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JD108_15340 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JD108_09120 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JD108_18955 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D JD108_18960 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D JD108_04910 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D JD108_01180 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JD108_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JD108_09255 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JD108_09750 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JD108_14230 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JD108_00510 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JD108_13125 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JD108_18945 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D JD108_18950 addB; helicase-exonuclease AddAB subunit AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D JD108_01820 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D JD108_08770 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D JD108_09480 Ku protein K10979 ku; DNA end-binding protein Ku
D JD108_09445 ligD; non-homologous end-joining DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D JD108_00080 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JD108_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JD108_09775 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JD108_12475 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JD108_21455 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JD108_01700 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JD108_12615 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JD108_14565 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JD108_10480 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JD108_10300 RecX family transcriptional regulator K03565 recX; regulatory protein
D JD108_12215 DEAD/DEAH box helicase family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D JD108_11255 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JD108_11260 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JD108_10075 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:bcop03029]
D JD108_10060 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JD108_16345 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JD108_09990 elongation factor Ts K02357 tsf; elongation factor Ts
D JD108_01340 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JD108_01335 fusA; elongation factor G K02355 fusA; elongation factor G
D JD108_14240 era; GTPase Era K03595 era; GTPase
D JD108_06565 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JD108_14505 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JD108_15200 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JD108_13700 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JD108_03190 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JD108_03195 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JD108_03185 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JD108_21985 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JD108_14365 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JD108_01315 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D JD108_14370 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JD108_02665 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JD108_02660 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JD108_14360 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JD108_15170 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JD108_06790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JD108_01545 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JD108_18970 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JD108_18965 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D JD108_22090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JD108_02340 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bcop02000]
D JD108_18285 ABC transporter ATP-binding protein K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
D JD108_04290 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JD108_04295 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JD108_17695 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D JD108_11275 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JD108_11280 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D JD108_11285 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D JD108_11290 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JD108_13395 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D JD108_13400 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D JD108_13405 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D JD108_15855 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D JD108_16385 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D JD108_15860 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D JD108_16390 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D JD108_15865 phosphate ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D JD108_16395 phosphate ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D JD108_18585 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JD108_05630 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JD108_18580 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JD108_05640 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JD108_18575 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JD108_05635 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JD108_17640 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JD108_05755 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JD108_08940 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JD108_05750 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D JD108_17630 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D JD108_05745 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D JD108_17625 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JD108_05740 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JD108_03060 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JD108_03075 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D JD108_03070 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D JD108_03065 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D JD108_21370 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D JD108_21375 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D JD108_07965 osmoprotectant ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D JD108_07960 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D JD108_07970 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D JD108_07955 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JD108_12090 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D JD108_12095 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D JD108_12100 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D JD108_13585 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D JD108_21490 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D JD108_21525 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D JD108_13595 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D JD108_21485 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D JD108_13590 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D JD108_21495 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D JD108_21520 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D JD108_13935 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JD108_16980 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JD108_02670 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JD108_16975 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D JD108_02675 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D JD108_16970 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D JD108_02680 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D JD108_21185 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D JD108_21195 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D JD108_21190 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D JD108_21200 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D JD108_21240 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D JD108_10185 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JD108_21230 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JD108_10195 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JD108_21225 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JD108_10200 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JD108_21235 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JD108_10190 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JD108_05430 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JD108_05435 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JD108_05440 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JD108_01935 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D JD108_01945 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D JD108_01940 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JD108_02465 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JD108_02470 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JD108_02475 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JD108_02480 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JD108_20010 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein
D JD108_04320 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D JD108_06070 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JD108_06075 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JD108_06065 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D JD108_06060 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D JD108_09170 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D JD108_09175 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D JD108_09180 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D JD108_19625 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_21580 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_03085 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_05400 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_08970 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_10225 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JD108_21600 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_03020 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_08985 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_10230 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JD108_21595 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JD108_03025 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JD108_08990 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JD108_10235 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_21590 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_03030 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_08975 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JD108_21585 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_03035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_08980 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_10240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JD108_02405 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JD108_02400 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JD108_02395 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JD108_07165 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D JD108_07170 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D JD108_07175 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D JD108_07180 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D JD108_07755 transporter substrate-binding domain-containing protein K17073 lysX1; putative lysine transport system substrate-binding protein
D JD108_07760 amino acid ABC transporter permease K17074 lysX2; putative lysine transport system permease protein
D JD108_07765 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D JD108_20015 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JD108_03850 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JD108_05095 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JD108_01835 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D JD108_03855 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D JD108_05100 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D JD108_03860 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JD108_05090 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JD108_12915 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_14580 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_17140 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02410 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02420 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_02430 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_08060 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JD108_15750 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_12910 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_08065 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JD108_15745 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_12905 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_08070 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JD108_12900 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_15740 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_08075 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JD108_12895 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_15735 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_17410 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JD108_15765 peptide ABC transporter substrate-binding protein K16199 dppE; dipeptide transport system substrate-binding protein
D JD108_14435 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JD108_17390 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JD108_06195 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JD108_10760 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JD108_11685 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JD108_14430 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_15975 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_17395 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_06200 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_10765 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_11690 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JD108_14425 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_15970 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_17400 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_06205 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_10770 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_11695 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JD108_14445 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JD108_17405 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JD108_06220 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JD108_10775 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JD108_11700 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JD108_14440 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JD108_06225 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JD108_10780 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JD108_11705 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JD108_07860 iron-hydroxamate ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D JD108_07865 iron ABC transporter permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D JD108_07855 ABC transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D JD108_19550 iron-siderophore ABC transporter substrate-binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein
D JD108_19555 iron ABC transporter permease K25110 sirB; iron-siderophore transport system permease protein
D JD108_19560 iron ABC transporter permease K25111 sirC; iron-siderophore transport system permease protein
D JD108_19565 ABC transporter ATP-binding protein K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D JD108_01810 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D JD108_01800 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D JD108_01805 ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D JD108_14410 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JD108_05165 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JD108_14405 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D JD108_13790 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JD108_14400 heme ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JD108_11570 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JD108_11560 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D JD108_11565 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D JD108_00835 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D JD108_00845 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D JD108_00840 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JD108_13890 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D JD108_13900 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D JD108_13905 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D JD108_13895 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D JD108_04105 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D JD108_04110 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D JD108_04100 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D JD108_04115 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D JD108_18460 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JD108_14590 ECF transporter S component K16924 mtsT; energy-coupling factor transport system substrate-specific component
D JD108_21160 QueT transporter family protein K16928 mtaT; energy-coupling factor transport system substrate-specific component
D JD108_21145 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JD108_01520 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JD108_11360 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JD108_21155 ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_01510 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_11350 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_21150 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_01515 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_11355 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JD108_03220 ABC transporter permease K09696 natB; sodium transport system permease protein
D JD108_03215 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D JD108_13960 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein
D JD108_03940 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein
D JD108_03935 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D JD108_03930 HlyD family efflux transporter periplasmic adaptor subunit K25183 ybhG; membrane fusion protein YbhG
D JD108_11160 efflux RND transporter periplasmic adaptor subunit K25183 ybhG; membrane fusion protein YbhG
D JD108_12660 efflux RND transporter periplasmic adaptor subunit K25183 ybhG; membrane fusion protein YbhG
D JD108_02885 ABC transporter permease K11636 yxdM; putative ABC transport system permease protein
D JD108_02880 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D JD108_05505 ATP-binding cassette domain-containing protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D JD108_19900 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JD108_19905 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JD108_18230 ABC-2 family transporter protein K25154 evrC; viologen exporter family transport system permease protein
D JD108_18235 ABC-2 family transporter protein K25155 evrB; viologen exporter family transport system permease protein
D JD108_18240 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D JD108_21325 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D JD108_21320 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D JD108_19075 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JD108_04210 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JD108_07140 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D JD108_09575 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JD108_10690 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D JD108_12715 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JD108_19080 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JD108_04205 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JD108_07135 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JD108_09580 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JD108_12710 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JD108_08135 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JD108_04395 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D JD108_21460 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D JD108_14630 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D JD108_21405 lplT; lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D JD108_17500 MFS transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D JD108_07705 MFS transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D JD108_18280 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D JD108_11625 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D JD108_13535 MFS transporter K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D JD108_15815 MFS transporter K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D JD108_21045 MFS transporter K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D JD108_08660 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D JD108_07085 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D JD108_00210 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D JD108_00215 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JD108_00205 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D JD108_00765 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JD108_21440 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D JD108_00780 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D JD108_16510 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D JD108_22020 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D JD108_18860 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D JD108_20025 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D JD108_18855 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JD108_20020 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JD108_15285 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D JD108_04805 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D JD108_10495 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D JD108_18815 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JD108_07160 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JD108_07270 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JD108_10410 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JD108_14330 CidA/LrgA family protein K06518 cidA; holin-like protein
D JD108_18895 CidA/LrgA family protein K06518 cidA; holin-like protein
D JD108_17830 amino acid permease K11733 lysP; lysine-specific permease
D JD108_13530 amino acid permease K02205 rocE; arginine/ornithine permease
D JD108_16225 endospore germination permease K06311 yndE; spore germination protein
D JD108_10520 GerAB/ArcD/ProY family transporter K06311 yndE; spore germination protein
D JD108_08480 amino acid permease K16263 yjeH; amino acid efflux transporter
D JD108_16940 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JD108_18865 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D JD108_07250 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D JD108_19140 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D JD108_17175 QacE family quaternary ammonium compound efflux SMR transporter K18924 ykkC; paired small multidrug resistance pump
D JD108_17170 multidrug efflux SMR transporter K18925 ykkD; paired small multidrug resistance pump
D JD108_08120 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D JD108_07675 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D JD108_03775 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D JD108_19115 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D JD108_17280 L-lactate permease K03303 lutP; lactate permease
D JD108_13490 cax; calcium/proton exchanger K07300 chaA; Ca2+:H+ antiporter
D JD108_05885 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D JD108_16465 cation:dicarboxylase symporter family transporter K11102 gltP; proton glutamate symport protein
D JD108_07730 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D JD108_16945 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D JD108_19595 sodium:proton antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D JD108_18705 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D JD108_02155 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D JD108_14850 cation:proton antiporter regulatory subunit K07228 khtT; K+:H+ antiporter subunit KhtT
D JD108_14860 cation:proton antiporter regulatory subunit K07228 khtT; K+:H+ antiporter subunit KhtT
D JD108_14855 cation:proton antiporter K26732 khtU; K+:H+ antiporter subunit KhtU
D JD108_09725 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D JD108_16210 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D JD108_08845 uracil permease K02824 uraA; uracil permease
D JD108_05805 purine permease K16169 pbuX; xanthine permease
D JD108_17110 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D JD108_02835 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D JD108_02890 chromate transporter K07240 chrA; chromate transporter
D JD108_02895 chromate transporter K07240 chrA; chromate transporter
D JD108_11650 chromate transporter K07240 chrA; chromate transporter
D JD108_04755 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family
D JD108_11820 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D JD108_17240 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D JD108_17235 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D JD108_17230 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D JD108_04845 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D JD108_14320 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D JD108_00060 arsenic transporter K03893 arsB; arsenical pump membrane protein
D JD108_15275 spoVB; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D JD108_16105 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JD108_06090 AEC family transporter K24180 mleP; malate permease and related proteins
D JD108_04155 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D JD108_03045 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D JD108_07225 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D JD108_03050 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D JD108_13990 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JD108_00250 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JD108_02270 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JD108_05335 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JD108_09720 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D JD108_13995 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JD108_00245 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JD108_02265 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JD108_05330 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JD108_09715 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D JD108_14000 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JD108_00240 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JD108_02260 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JD108_09710 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JD108_18225 ECF transporter S component K23675 fmnP; riboflavin transporter
D JD108_09185 thiT; energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter
D JD108_13465 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D JD108_08535 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D JD108_10675 PD40 domain-containing protein K03641 tolB; TolB protein
D JD108_20290 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D JD108_10905 sulfite exporter TauE/SafE family protein K06196 ccdA; cytochrome c-type biogenesis protein
D JD108_07900 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D JD108_17000 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D JD108_22065 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:bcop02044]
D JD108_07785 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JD108_17780 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D JD108_17795 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D JD108_17785 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D JD108_17770 pilM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D JD108_17790 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JD108_17815 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D JD108_01895 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D JD108_00905 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D JD108_01850 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D JD108_01855 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D JD108_07795 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D JD108_00915 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_00980 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_01860 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_03430 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_00920 type II secretion system F family protein K12510 tadB; tight adherence protein B
D JD108_01865 type II secretion system F family protein K12510 tadB; tight adherence protein B
D JD108_00925 type II secretion system F family protein K12511 tadC; tight adherence protein C
D JD108_01870 type II secretion system F family protein K12511 tadC; tight adherence protein C
D JD108_00930 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA
D JD108_01890 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D JD108_17765 PilN domain-containing protein K12289 hofN; pilus assembly protein HofN
D JD108_08630 YggT family protein K02221 yggT; YggT family protein
D JD108_14495 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D JD108_14485 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D JD108_12210 MBL fold metallo-hydrolase K02238 comEC; competence protein ComEC
D JD108_14500 late competence protein ComER K02239 comER; competence protein ComER
D JD108_20150 DEAD/DEAH box helicase family protein K02240 comFA; competence protein ComFA
D JD108_20145 ComF family protein K02242 comFC; competence protein ComFC
D JD108_17775 prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JD108_09915 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JD108_09910 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JD108_20045 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D JD108_09660 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D JD108_09820 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JD108_09830 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JD108_09835 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JD108_09880 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D JD108_09890 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JD108_09895 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JD108_09900 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JD108_09905 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JD108_03535 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D JD108_20000 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JD108_15265 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D JD108_01255 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JD108_15260 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JD108_19535 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JD108_01465 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JD108_09605 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JD108_09570 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JD108_15295 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JD108_22090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JD108_01075 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JD108_02640 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JD108_01080 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D JD108_02645 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:bcop02042]
D JD108_18815 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JD108_07160 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JD108_07270 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JD108_10410 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JD108_15665 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 02022 Two-component system [BR:bcop02022]
D JD108_16785 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JD108_16790 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D JD108_03090 HAMP domain-containing histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D JD108_03095 response regulator transcription factor K07770 cssR; two-component system, OmpR family, response regulator CssR
D JD108_03595 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JD108_03625 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JD108_03590 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JD108_12755 HAMP domain-containing protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D JD108_12760 response regulator transcription factor K07775 resD; two-component system, OmpR family, response regulator ResD
D JD108_21930 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D JD108_21935 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D JD108_11405 response regulator transcription factor K10697 rpaA; two-component system, OmpR family, response regulator RpaA
D JD108_02875 HAMP domain-containing histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D JD108_02870 response regulator transcription factor K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D JD108_01750 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JD108_20165 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D JD108_20160 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D JD108_03810 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JD108_03815 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D JD108_18410 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D JD108_18405 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D JD108_02095 PAS domain S-box protein K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D JD108_02100 response regulator transcription factor K07696 nreC; two-component system, NarL family, response regulator NreC
D JD108_10900 PAS domain-containing protein K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D JD108_05945 HAMP domain-containing histidine kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D JD108_20870 response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D JD108_13110 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D JD108_17150 sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D JD108_17145 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D JD108_02250 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D JD108_02255 response regulator K02475 K02475; two-component system, CitB family, response regulator
D JD108_06020 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D JD108_06025 response regulator transcription factor K02477 K02477; two-component system, LytTR family, response regulator
D JD108_08800 response regulator K02477 K02477; two-component system, LytTR family, response regulator
D JD108_00495 PAS domain-containing protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D JD108_18845 atoS; two-component system sensor histidine kinase AtoS K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D JD108_18840 sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D JD108_09935 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JD108_04080 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JD108_09885 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JD108_09930 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JD108_18685 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D JD108_18680 response regulator K07719 glnL; two-component system, response regulator GlnL
D JD108_06310 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:bcop02035]
D JD108_09935 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JD108_07215 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JD108_09940 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JD108_15980 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D JD108_09945 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D JD108_09950 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D JD108_03880 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JD108_12405 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JD108_09930 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JD108_04080 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JD108_09885 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JD108_12890 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_15655 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_15950 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_17615 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_18310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_18875 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_19210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_19340 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_21175 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_21245 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_21730 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_02930 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_05300 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_05960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_05995 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_10845 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JD108_04810 globin-coupled sensor protein K06595 hemAT; heam-based aerotactic trancducer
D JD108_09830 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JD108_09835 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JD108_09840 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D JD108_09890 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JD108_09895 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JD108_09900 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JD108_09905 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JD108_09915 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JD108_09910 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JD108_09825 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JD108_09875 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JD108_09880 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D JD108_09820 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JD108_09870 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D JD108_09815 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JD108_09850 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D JD108_09805 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JD108_09810 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JD108_19870 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D JD108_20585 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D JD108_20580 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D JD108_09860 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D JD108_20125 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JD108_20120 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JD108_20095 fliB; flagellin lysine-N-methylase K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D JD108_20100 flagellin K02406 fliC; flagellin
D JD108_20085 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D JD108_06975 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D JD108_20080 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D JD108_09960 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D JD108_18860 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D JD108_20025 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D JD108_18855 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JD108_20020 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JD108_06070 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JD108_06075 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JD108_20110 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D JD108_20135 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D JD108_20090 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D JD108_09865 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D JD108_09920 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D JD108_09925 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D JD108_17790 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JD108_17780 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D JD108_17795 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D JD108_17785 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D JD108_07785 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JD108_17770 pilM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D JD108_17815 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D JD108_00930 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA
D JD108_01890 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D JD108_01895 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D JD108_00905 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D JD108_01850 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D JD108_01855 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D JD108_07795 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D JD108_00915 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_00980 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_01860 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JD108_03430 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bcop04812]
D JD108_15480 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JD108_20590 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JD108_08580 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JD108_08575 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JD108_15460 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D JD108_15455 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D JD108_00910 AAA family ATPase K03609 minD; septum site-determining protein MinD
D JD108_22055 ParA family protein K03496 parA; chromosome partitioning protein
D JD108_03400 ParA family protein K03496 parA; chromosome partitioning protein
D JD108_22050 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JD108_22060 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JD108_03405 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bcop04147]
D JD108_19570 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JD108_19590 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JD108_19585 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JD108_16830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JD108_10320 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D JD108_04355 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D JD108_04765 flotillin family protein K07192 FLOT; flotillin
D JD108_02665 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JD108_14365 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JD108_01315 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D JD108_18775 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JD108_00110 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JD108_01340 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JD108_11520 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JD108_16055 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JD108_05375 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JD108_16065 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20735 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_20920 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_21620 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JD108_08490 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JD108_01470 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JD108_15245 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JD108_04310 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JD108_19915 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JD108_05650 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JD108_19920 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JD108_10830 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JD108_09005 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JD108_04130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_10455 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JD108_15630 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JD108_06015 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D JD108_13840 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D JD108_12730 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JD108_02980 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JD108_13015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_10560 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JD108_15790 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D JD108_16035 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D JD108_19580 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:bcop02048]
D JD108_01820 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D JD108_08770 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D JD108_01825 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D JD108_08775 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D JD108_08785 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D JD108_08745 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D JD108_08765 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D JD108_08755 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1
D JD108_08760 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2
D JD108_08750 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d
D JD108_19460 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D JD108_01725 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D JD108_03260 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D JD108_19465 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JD108_01720 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JD108_03255 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JD108_19470 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JD108_01705 restriction endonuclease subunit S K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JD108_01715 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JD108_03250 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JD108_21845 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D JD108_21850 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D JD108_03660 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D JD108_04560 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D JD108_19475 restriction endonuclease K07448 mrr; restriction system protein
D JD108_21805 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JD108_02540 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JD108_21800 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE
D JD108_02535 CopG family ribbon-helix-helix protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D JD108_20270 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D JD108_20265 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D JD108_08580 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JD108_15480 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JD108_20590 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JD108_10725 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JD108_10720 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JD108_15170 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JD108_06790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:bcop01504]
D JD108_14585 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JD108_09370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JD108_03140 VanW family protein K18346 vanW; vancomycin resistance protein VanW
D JD108_17385 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JD108_11835 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:bcop00536]
D JD108_15665 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bcop00537]
D JD108_10320 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D JD108_15665 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bcop03100]
D JD108_16645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_01135 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_01585 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_02700 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_02725 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_14145 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JD108_00415 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_19615 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_00375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_01635 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_02810 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_05820 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_06880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_00145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_14110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JD108_01600 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JD108_02740 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JD108_06825 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JD108_18140 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JD108_00340 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_02775 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_06850 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_11420 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_18115 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_19740 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JD108_14115 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JD108_18085 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JD108_01625 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JD108_02790 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JD108_18095 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JD108_00325 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_01610 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_02760 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_06835 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_14100 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_18130 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JD108_10940 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_00370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_02805 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_06875 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_18090 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_19730 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_00390 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_01645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_06895 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_08110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JD108_14120 tRNA-His K14226 tRNA-His; tRNA His
D JD108_00410 tRNA-His K14226 tRNA-His; tRNA His
D JD108_18100 tRNA-His K14226 tRNA-His; tRNA His
D JD108_01130 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JD108_01580 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JD108_02695 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JD108_02720 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JD108_06890 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_02800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_00365 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_06870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_08100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_11430 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_00420 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_02755 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_14105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_00385 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_05830 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_18080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JD108_00360 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JD108_01630 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JD108_02795 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JD108_06865 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JD108_19735 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JD108_00335 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_00400 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_02750 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_02770 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_06845 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_07325 tRNA-Ile K14230 tRNA-Met; tRNA Met
D JD108_14130 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_18120 tRNA-Met K14230 tRNA-Met; tRNA Met
D JD108_00345 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JD108_02780 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JD108_18110 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JD108_01640 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_05825 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_06885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_00380 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_08105 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_12460 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_12465 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JD108_02745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_14135 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_00320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_08095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_18135 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_00290 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_00395 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_14035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JD108_00350 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_02785 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_06855 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_11425 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_01605 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_06830 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JD108_00405 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JD108_14125 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JD108_18105 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JD108_00355 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JD108_01620 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JD108_06860 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JD108_00330 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_07330 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_01615 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_02765 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_06840 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_18125 tRNA-Val K14237 tRNA-Val; tRNA Val
D JD108_14150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JD108_06810 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JD108_00425 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JD108_02710 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JD108_00095 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JD108_13735 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D JD108_19515 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JD108_17260 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D JD108_19910 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D JD108_11535 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D JD108_07110 FAD-dependent oxidoreductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D JD108_11230 iron-containing redox enzyme family protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D JD108_20910 acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D JD108_15785 FAD-dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D JD108_01770 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JD108_05250 zinc-dependent alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JD108_08255 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JD108_19350 namA; NADPH dehydrogenase NamA K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D JD108_02205 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D JD108_00045 NAD(P)H-dependent oxidoreductase K03206 azr; azobenzene reductase [EC:1.7.1.6]
D JD108_02010 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D JD108_11515 YpdA family putative bacillithiol disulfide reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D JD108_11320 msrA; peptide-methionine (S)-S-oxide reductase MsrA K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D JD108_14570 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JD108_18210 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JD108_06990 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JD108_02000 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D JD108_00470 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D JD108_07945 aromatic ring-hydroxylating dioxygenase subunit alpha K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239]
D JD108_05130 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JD108_07850 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JD108_00055 arsC; arsenate reductase (thioredoxin) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D JD108_21070 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D JD108_14080 ablB; putative beta-lysine N-acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264]
D JD108_06550 N-acetyltransferase K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D JD108_18885 protein-glutamine gamma-glutamyltransferase K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D JD108_12250 bshA; N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D JD108_16170 larB; nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D JD108_09440 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D JD108_05810 fosB; metallothiol transferase FosB K11210 fosB; metallothiol transferase [EC:2.5.1.-]
D JD108_17265 four-carbon acid sugar kinase family protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D JD108_09205 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D JD108_14210 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D JD108_04855 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_05930 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_06040 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_08450 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_08605 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_10140 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_11090 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_12175 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_13115 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_14040 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_16090 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_17690 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_19530 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_15610 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_17685 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_20525 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_02915 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_05615 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_06375 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_10945 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D JD108_01185 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D JD108_01670 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D JD108_05315 DNA integrity scanning protein DisA nucleotide-binding domain protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D JD108_11960 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D JD108_12875 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D JD108_19830 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D JD108_05560 HAMP domain-containing histidine kinase K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3]
D JD108_01170 protein arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D JD108_04825 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D JD108_16820 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D JD108_18625 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D JD108_00750 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D JD108_07290 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D JD108_14545 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D JD108_21970 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D JD108_00600 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JD108_00615 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D JD108_13445 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D JD108_12140 glycoside hydrolase family 18 protein K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-]
D JD108_09125 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JD108_12010 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JD108_04325 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D JD108_12255 bshB1; bacillithiol biosynthesis deacetylase BshB1 K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D JD108_00170 pdaA; delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D JD108_12590 PIG-L family deacetylase K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D JD108_00650 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D JD108_19065 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JD108_02230 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JD108_02815 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JD108_09335 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JD108_11945 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JD108_20790 low molecular weight protein arginine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D JD108_13800 uvsE; UV DNA damage repair endonuclease UvsE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D JD108_13865 splB; spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D JD108_18675 tetraprenyl-beta-curcumene synthase family protein K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]
D JD108_06300 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D JD108_16175 larE; ATP-dependent sacrificial sulfur transferase LarE K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D JD108_19125 larE; ATP-dependent sacrificial sulfur transferase LarE K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D JD108_04905 LarC family nickel insertion protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D JD108_04900 DUF111 family protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D JD108_20890 cobalamin-dependent protein K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D JD108_02075 calcium-translocating P-type ATPase, SERCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D JD108_05845 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D JD108_19700 HPr family phosphocarrier protein K11184 chr; catabolite repression HPr-like protein
D JD108_06545 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
D JD108_06540 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D JD108_08470 bshC; bacillithiol biosynthesis cysteine-adding enzyme BshC K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D JD108_17605 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D JD108_12630 ferredoxin K05337 fer; ferredoxin
D JD108_19540 YqzM family protein K12263 cccB; cytochrome c551
D JD108_19975 cytochrome c K12263 cccB; cytochrome c551
D JD108_04410 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D JD108_15795 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D JD108_16040 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D JD108_15780 4Fe-4S dicluster domain-containing protein K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
D JD108_19035 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D JD108_09210 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D JD108_04375 VOC family protein K08234 yaeR; glyoxylase I family protein
D JD108_08620 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D JD108_15905 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
D JD108_16435 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
D JD108_10645 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
D JD108_12570 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D JD108_17580 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D JD108_03900 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
D JD108_00305 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein
D JD108_02005 DoxX family protein K15977 K15977; putative oxidoreductase
D JD108_00310 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase
D JD108_02355 BrxA/BrxB family bacilliredoxin K26958 brxA_B; bacilliredoxin
D JD108_06510 ytxJ; bacillithiol system redox-active protein YtxJ K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JD108_14695 cold shock domain-containing protein K03704 cspA; cold shock protein
D JD108_15445 cold-shock protein K03704 cspA; cold shock protein
D JD108_21345 cold shock domain-containing protein K03704 cspA; cold shock protein
D JD108_05290 cold-shock protein K03704 cspA; cold shock protein
D JD108_05890 cold shock domain-containing protein K03704 cspA; cold shock protein
D JD108_11990 cold-shock protein K03704 cspA; cold shock protein
D JD108_04435 phage antirepressor KilAC domain-containing protein K07741 antB; anti-repressor protein
D JD108_08405 spx; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D JD108_02570 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
D JD108_09100 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A
D JD108_00025 DUF370 domain-containing protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D JD108_00745 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein
D JD108_04050 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D JD108_01165 UvrB/UvrC motif-containing protein K19411 mcsA; protein arginine kinase activator
D JD108_15695 trigger factor K03545 tig; trigger factor
D JD108_18045 ferric reductase-like transmembrane domain-containing protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D JD108_19520 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D JD108_16930 glutaredoxin family protein K06191 nrdH; glutaredoxin-like protein NrdH
D JD108_09680 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D JD108_12770 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D JD108_14295 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
D JD108_12595 genetic competence negative regulator K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D JD108_19245 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D JD108_15485 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D JD108_20485 JAB domain-containing protein K03630 radC; DNA repair protein RadC
D JD108_14990 AAA family ATPase K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D JD108_03650 AAA family ATPase K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D JD108_09665 YraN family protein K07460 yraN; putative endonuclease
D JD108_00580 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D JD108_09770 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D JD108_11105 DnaD domain protein K02086 dnaD; DNA replication protein
D JD108_18725 toprim domain-containing protein K07476 yusF; toprim domain protein
D JD108_15185 AAA family ATPase K07478 ycaJ; putative ATPase
D JD108_04520 AAA family ATPase K07505 repA; regulatory protein RepA
D JD108_07425 AAA family ATPase K07505 repA; regulatory protein RepA
D JD108_14885 IS5 family transposase K07481 K07481; transposase, IS5 family
D JD108_14890 IS5 family transposase K07481 K07481; transposase, IS5 family
D JD108_16270 IS5 family transposase K07481 K07481; transposase, IS5 family
D JD108_17490 IS5 family transposase K07481 K07481; transposase, IS5 family
D JD108_17980 IS5 family transposase K07481 K07481; transposase, IS5 family
D JD108_20415 IS5 family transposase K07481 K07481; transposase, IS5 family
D JD108_00295 IS5 family transposase K07481 K07481; transposase, IS5 family
D JD108_01970 IS5 family transposase K07481 K07481; transposase, IS5 family
D JD108_06585 IS5 family transposase K07481 K07481; transposase, IS5 family
D JD108_14980 transposase K07483 K07483; transposase
D JD108_19495 transposase K07483 K07483; transposase
D JD108_20035 transposase K07483 K07483; transposase
D JD108_03985 ISL3 family transposase K07485 K07485; transposase
D JD108_14950 IS110 family transposase K07486 K07486; transposase
D JD108_19170 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D JD108_16655 IS256 family transposase K07493 K07493; putative transposase
D JD108_19335 IS256 family transposase K07493 K07493; putative transposase
D JD108_19165 transposase K07496 K07496; putative transposase
D JD108_14975 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase
D JD108_19490 IS3 family transposase K07497 K07497; putative transposase
D JD108_14910 transposase K07497 K07497; putative transposase
D JD108_17995 transposase K07497 K07497; putative transposase
D JD108_19430 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D JD108_18425 PspA/IM30 family protein K03969 pspA; phage shock protein A
D JD108_08685 PspA/IM30 family protein K03969 pspA; phage shock protein A
D JD108_00505 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JD108_11165 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D JD108_11640 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D JD108_12655 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D JD108_03125 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D JD108_06050 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D JD108_09430 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D JD108_16260 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D JD108_09225 Na(+)/glucose symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D JD108_13495 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D JD108_15800 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D JD108_21255 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D JD108_01975 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D JD108_18635 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D JD108_10850 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D JD108_16095 polysaccharide biosynthesis protein K03328 TC.PST; polysaccharide transporter, PST family
D JD108_00705 polysaccharide biosynthesis protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D JD108_00525 pro-sigmaK processing inhibitor BofA family protein K06317 bofA; inhibitor of the pro-sigma K processing machinery
D JD108_15355 BofC C-terminal domain-containing protein K06318 bofC; forespore regulator of the sigma-K checkpoint
D JD108_10390 outer spore coat protein CotE K06328 cotE; spore coat protein E
D JD108_08730 spore coat associated protein CotJA K06332 cotJA; spore coat protein JA
D JD108_08735 spore coat protein CotJB K06333 cotJB; spore coat protein JB
D JD108_08740 manganese catalase family protein K06334 cotJC; spore coat protein JC
D JD108_17120 glycosyltransferase family 4 protein K06338 cotSA; spore coat protein SA
D JD108_11115 glycosyltransferase family 4 protein K06338 cotSA; spore coat protein SA
D JD108_22085 protein jag K06346 jag; spoIIIJ-associated protein
D JD108_01555 KinB-signaling pathway activation protein K06349 kbaA; KinB signaling pathway activation protein
D JD108_12050 biotin-dependent carboxyltransferase family protein K06350 kipA; antagonist of KipI
D JD108_12055 pxpB; 5-oxoprolinase subunit PxpB K06351 kipI; inhibitor of KinA
D JD108_13515 sporulation histidine kinase inhibitor Sda K06371 sda; developmental checkpoint coupling sporulation initiation to replication initiation
D JD108_12795 spore maturation protein K06373 spmA; spore maturation protein A
D JD108_12790 spore maturation protein K06374 spmB; spore maturation protein B
D JD108_06690 sporulation protein K06377 spo0M; sporulation-control protein
D JD108_12880 spoIIAA; anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D JD108_15525 STAS domain-containing protein K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D JD108_12955 spoIIM; stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D JD108_01565 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D JD108_14455 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D JD108_20600 M23 family metallopeptidase K06386 spoIIQ; stage II sporulation protein Q
D JD108_20805 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D JD108_13245 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D JD108_13240 spoIIIAB; stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D JD108_13235 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D JD108_13230 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D JD108_13225 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D JD108_13220 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D JD108_13215 spoIIIAG; stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D JD108_13210 SpoIIIAH-like family protein K06397 spoIIIAH; stage III sporulation protein AH
D JD108_12480 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D JD108_03375 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D JD108_14930 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D JD108_19510 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D JD108_15440 M23 family metallopeptidase K06401 spoIVFA; stage IV sporulation protein FA
D JD108_12865 stage V sporulation protein AA K06403 spoVAA; stage V sporulation protein AA
D JD108_12860 stage V sporulation protein AB K06404 spoVAB; stage V sporulation protein AB
D JD108_12855 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D JD108_06935 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D JD108_12850 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D JD108_06940 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D JD108_06945 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D JD108_12840 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D JD108_12845 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D JD108_12835 spore germination protein K06408 spoVAF; stage V sporulation protein AF
D JD108_10115 dpsA; dipicolinate synthase subunit DpsA K06410 spoVFA; dipicolinate synthase subunit A
D JD108_10120 dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D JD108_00655 spoVG; septation regulator SpoVG K06412 spoVG; stage V sporulation protein G
D JD108_10435 AAA family ATPase K06413 spoVK; stage V sporulation protein K
D JD108_09190 spoVM; stage V sporulation protein SpoVM K06414 spoVM; stage V sporulation protein M
D JD108_17520 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D JD108_10315 spoVS; stage V sporulation protein SpoVS K06416 spoVS; stage V sporulation protein S
D JD108_15555 LysM peptidoglycan-binding domain-containing protein K06417 spoVID; stage VI sporulation protein D
D JD108_06920 alpha/beta-type small acid-soluble spore protein K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D JD108_11925 alpha/beta-type small acid-soluble spore protein K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D JD108_13755 alpha/beta-type small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D JD108_02510 gamma-type small acid-soluble spore protein K06422 sspE; small acid-soluble spore protein E (minor gamma-type SASP)
D JD108_00630 small, acid-soluble spore protein, alpha/beta type K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D JD108_19690 H-type small acid-soluble spore protein K06425 sspH; small acid-soluble spore protein H (minor)
D JD108_21890 small acid-soluble spore protein H K06425 sspH; small acid-soluble spore protein H (minor)
D JD108_16215 sspI; small acid-soluble spore protein SspI K06426 sspI; small acid-soluble spore protein I (minor)
D JD108_18795 spore protein K06428 sspK; small acid-soluble spore protein K (minor)
D JD108_11070 tlp; small acid-soluble spore protein Tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein)
D JD108_14270 yqfD; sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D JD108_01550 spore gernimation protein K06294 gerD; spore germination protein D
D JD108_04240 spore germination protein K06295 gerKA; spore germination protein KA
D JD108_04235 Ger(x)C family spore germination protein K06297 gerKC; spore germination protein KC
D JD108_15715 GerMN domain-containing protein K06298 gerM; germination protein M
D JD108_15910 gerQ; spore coat protein GerQ K06305 gerQ; spore germination protein Q
D JD108_16440 gerQ; spore coat protein GerQ K06305 gerQ; spore germination protein Q
D JD108_08725 spore germination protein K06307 yfkQ; spore germination protein
D JD108_09450 spore germination protein K06307 yfkQ; spore germination protein
D JD108_16220 Ger(x)C family spore germination protein K06308 yfkR; spore germination protein
D JD108_08720 Ger(x)C family spore germination protein K06308 yfkR; spore germination protein
D JD108_09455 Ger(x)C family spore germination protein K06308 yfkR; spore germination protein
D JD108_08710 endospore germination permease K06309 yfkT; spore germination protein
D JD108_16230 spore germination protein K06310 yndD; spore germination protein
D JD108_10515 Ger(x)C family spore germination protein K06312 yndF; spore germination protein
D JD108_12565 ypeB; germination protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D JD108_06030 carbon starvation protein A K06200 cstA; carbon starvation protein
D JD108_08290 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D JD108_14265 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D JD108_08355 PhoH family protein K07175 phoH2; PhoH-like ATPase
D JD108_18025 PrkA family serine protein kinase K07180 prkA; serine protein kinase
C 99992 Structural proteins
D JD108_13965 efflux RND transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D JD108_08145 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D JD108_15645 ccsA; cytochrome c biogenesis protein CcsA K02497 hemX; HemX protein
C 99994 Others
D JD108_16780 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D JD108_13390 helix-turn-helix transcriptional regulator K07219 K07219; putative molybdopterin biosynthesis protein
D JD108_15825 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JD108_15850 helix-turn-helix transcriptional regulator K07219 K07219; putative molybdopterin biosynthesis protein
D JD108_16355 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JD108_16380 helix-turn-helix transcriptional regulator K07219 K07219; putative molybdopterin biosynthesis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JD108_19160 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D JD108_15955 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D JD108_01355 globin K06886 glbN; hemoglobin
D JD108_13305 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D JD108_09505 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D JD108_18620 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JD108_02685 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JD108_10505 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D JD108_04415 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D JD108_04400 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D JD108_17570 metal-dependent hydrolase K07038 K07038; inner membrane protein
D JD108_18345 metal-dependent hydrolase K07038 K07038; inner membrane protein
D JD108_05785 metal-dependent hydrolase K07038 K07038; inner membrane protein
D JD108_16815 fxsA; membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA
D JD108_11225 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D JD108_18980 cytochrome c oxidase assembly protein K02862 ctaG; putative membrane protein
D JD108_02585 SprT family protein K03095 sprL; SprT-like protein
D JD108_16165 phage holin family protein K08972 K08972; putative membrane protein
D JD108_19845 phage holin family protein K08972 K08972; putative membrane protein
D JD108_18975 DUF420 domain-containing protein K08976 K08976; putative membrane protein
D JD108_16155 DUF350 domain-containing protein K08989 K08989; putative membrane protein
D JD108_21280 AroM family protein K14591 aroM; protein AroM
C 99997 Function unknown
D JD108_21005 HD domain-containing protein K06885 K06885; uncharacterized protein
D JD108_05005 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D JD108_05910 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D JD108_07575 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D JD108_07560 late control protein K06905 D; Bacteriophage probable baseplate hub protein
D JD108_07535 phage tail sheath family protein K06907 FI; Bacteriophage tail sheath protein
D JD108_07540 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D JD108_05185 CoA-binding protein K06929 K06929; uncharacterized protein
D JD108_01830 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D JD108_19850 HD domain-containing protein K06950 K06950; uncharacterized protein
D JD108_17445 L-cystine transporter K06956 K06956; uncharacterized protein
D JD108_09615 KH domain-containing protein K06960 K06960; uncharacterized protein
D JD108_01240 NYN domain-containing protein K06962 K06962; uncharacterized protein
D JD108_18255 zinc metallopeptidase K06973 K06973; uncharacterized protein
D JD108_03130 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D JD108_17095 lamin tail domain-containing protein K07004 K07004; uncharacterized protein
D JD108_18350 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D JD108_06355 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D JD108_16555 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D JD108_04385 aldo/keto reductase K07079 K07079; uncharacterized protein
D JD108_18690 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D JD108_19770 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D JD108_18375 TSUP family transporter K07090 K07090; uncharacterized protein
D JD108_19400 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JD108_20365 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JD108_04780 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JD108_01070 PhoX family phosphatase K07093 K07093; uncharacterized protein
D JD108_15700 metallophosphoesterase K07095 K07095; uncharacterized protein
D JD108_13080 metallophosphoesterase K07098 K07098; uncharacterized protein
D JD108_00255 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D JD108_21250 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D JD108_14090 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D JD108_18740 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D JD108_12030 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D JD108_13570 YitT family protein K07149 K07149; uncharacterized protein
D JD108_22040 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D JD108_22095 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D JD108_01915 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D JD108_14300 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D JD108_07915 DUF2357 domain-containing protein K09124 K09124; uncharacterized protein
D JD108_11530 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D JD108_21000 YwgA family protein K09388 K09388; uncharacterized protein
D JD108_21290 DUF917 family protein K09703 K09703; uncharacterized protein
D JD108_08155 DUF1284 domain-containing protein K09706 K09706; uncharacterized protein
D JD108_09965 DUF342 domain-containing protein K09749 K09749; uncharacterized protein
D JD108_05175 DUF309 domain-containing protein K09763 K09763; uncharacterized protein
D JD108_09045 DUF309 domain-containing protein K09763 K09763; uncharacterized protein
D JD108_10065 DUF503 domain-containing protein K09764 K09764; uncharacterized protein
D JD108_16195 DUF2225 domain-containing protein K09766 K09766; uncharacterized protein
D JD108_13545 DUF188 domain-containing protein K09768 K09768; uncharacterized protein
D JD108_20040 YaaR family protein K09770 K09770; uncharacterized protein
D JD108_05170 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D JD108_00225 ribonuclease H-like YkuK family protein K09776 K09776; uncharacterized protein
D JD108_02460 DUF378 domain-containing protein K09779 K09779; uncharacterized protein
D JD108_19980 hypothetical protein K09780 K09780; uncharacterized protein
D JD108_18020 yhbH; sporulation protein YhbH K09786 K09786; uncharacterized protein
D JD108_09600 putative DNA-binding protein K09787 K09787; uncharacterized protein
D JD108_10475 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D JD108_18710 DNA-binding protein K00243 K00243; uncharacterized protein
D JD108_03800 YcaQ family DNA glycosylase K09927 K09927; uncharacterized protein
D JD108_18385 YneF family protein K09976 K09976; uncharacterized protein
D JD108_06755 hypothetical protein K05967 K05967; uncharacterized protein
D JD108_11775 YIEGIA family protein K05739 seaA; uncharacterized protein
D JD108_19155 ribonuclease H-like domain-containing protein K07502 yprB; uncharacterized protein
D JD108_15420 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D JD108_09425 DUF47 domain-containing protein K07220 K07220; uncharacterized protein
D JD108_18290 DUF402 domain-containing protein K07586 ygaC; uncharacterized protein
D JD108_10050 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024