+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Bifidobacterium coryneforme

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D BCOR_0284 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D BCOR_1063 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C BCOR_0743 GTP-binding protein Era K03595 era; GTPase C BCOR_1242 GTP-binding protein, GTP1/OBG family K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C BCOR_1140 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C BCOR_0955 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB C BCOR_1238 Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D BCOR_0019 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BCOR_0445 16S RNA methylase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D BCOR_0267 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D BCOR_0748 RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BCOR_0032 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BCOR_0454 S-adenosyl-methyltransferase mraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BCOR_0167 Uroporphyrin-III C/tetrapyrrole K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BCOR_0878 Hemolysin-like protein with S4 and FtsJ-like methyltransferase domains K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D BCOR_0012 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BCOR_0623 radical SAM family protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BCOR_0878 Hemolysin-like protein with S4 and FtsJ-like methyltransferase domains K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D BCOR_1041 Ribosomal large subunit pseudouridine synthase D K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D BCOR_0668 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BCOR_0434 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C BCOR_0607 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C BCOR_0272 16S rrNA processing protein K02860 rimM; 16S rRNA processing protein RimM B rRNA processing factors C BCOR_0284 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C BCOR_1245 putative Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] C BCOR_0767 Endonuclease involved in recombination K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases B GTPases C BCOR_0743 GTP-binding protein Era K03595 era; GTPase C BCOR_0667 GTP-binding protein K03977 engA; GTPase C BCOR_1242 GTP-binding protein, GTP1/OBG family K03979 obgE; GTPase [EC:3.6.5.-] C BCOR_0446 GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C BCOR_1066 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C BCOR_0553 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C BCOR_1138 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C BCOR_0593 iojap protein family K09710 ybeB; ribosome-associated protein C BCOR_0745 putative metalloprotease K07042 ybeY; probable rRNA maturation factor C BCOR_0833 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C BCOR_0286 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024