+F Repair protein KO
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DNA Repair and Recombination Proteins - Brachypodium distachyon (stiff brome)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 100826736 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 100821076 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 100838499 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 100844435 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 100822861 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 100830675 adenine DNA glycosylase isoform X3 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 100825070 uncharacterized protein LOC100825070 isoform X2 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 100836671 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 100825895 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 100836192 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 100830878 DNA-(apurinic or apyrimidinic site) lyase 2 isoform X2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 100827521 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 100831775 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F 100831421 protein IWS1 homolog A K03504 POLD3; DNA polymerase delta subunit 3
F 100827592 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
F 100836085 uncharacterized protein LOC100836085 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 100829409 DNA polymerase epsilon catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 100828214 DNA polymerase epsilon subunit B isoform X1 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 104584736 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 100843467 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 100838825 proliferating cell nuclear antigen isoform X2 K04802 PCNA; proliferating cell nuclear antigen
E 100837914 proliferating cell nuclear antigen isoform X1 K04802 PCNA; proliferating cell nuclear antigen
E 100826850 flap endonuclease 1-A K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 100821896 flap endonuclease 1-B K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 100843366 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 100823945 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 100840189 tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 100839576 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 100844676 polynucleotide 3'-phosphatase ZDP isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 100827137 DNA polymerase lambda K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 100828525 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 100844295 poly [ADP-ribose] polymerase 3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 100846901 poly [ADP-ribose] polymerase 2 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 100830028 DNA repair protein RAD4 isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 100838271 ubiquitin receptor RAD23d K10839 RAD23; UV excision repair protein RAD23
F 100823267 ubiquitin receptor RAD23b K10839 RAD23; UV excision repair protein RAD23
F 100830156 probable ubiquitin receptor RAD23 K10839 RAD23; UV excision repair protein RAD23
F 100823797 probable ubiquitin receptor RAD23 isoform X2 K10839 RAD23; UV excision repair protein RAD23
F 112271456 ubiquitin receptor RAD23b-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 100826136 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 100841533 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 100834237 cullin-4 K10609 CUL4; cullin 4
F 100826348 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 100841631 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 100842647 DNA damage-binding protein 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 100825936 uncharacterized protein LOC100825936 K15082 RAD7; DNA repair protein RAD7
F 100826734 DNA repair protein RAD16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 100841250 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 100838357 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 100833824 DNA-directed RNA polymerases II, IV and V subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 100843177 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 104583855 DNA-directed RNA polymerases IV and V subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 100844964 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 100836489 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 100840962 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 100831395 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 100845664 DNA-directed RNA polymerases II and V subunit 6B K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 100844296 DNA-directed RNA polymerases II and V subunit 6B K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 100821003 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 100837358 DNA-directed RNA polymerases II, IV and V subunit 8B K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 100842614 DNA-directed RNA polymerases II, IV and V subunit 8B K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 100845538 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 100840396 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 100821357 DNA-directed RNA polymerases II, IV and V subunit 9B K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 100828005 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 100822387 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 100828839 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X2 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 100839628 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 100843746 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 100844690 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 100828953 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 100826136 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 100841533 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 100834237 cullin-4 K10609 CUL4; cullin 4
F 100826348 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 100841631 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 100837859 DNA excision repair protein ERCC-8 isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 100838784 DNA excision repair protein CSB K10841 ERCC6; DNA excision repair protein ERCC-6
F 100828500 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 100837462 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 100833025 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 100834870 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 100822542 general transcription and DNA repair factor IIH helicase subunit XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 100824230 general transcription and DNA repair factor IIH helicase subunit XPD isoform X1 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 100833387 general transcription and DNA repair factor IIH helicase subunit XPD isoform X1 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 100845916 general transcription and DNA repair factor IIH subunit TFB1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 100833758 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 100830439 general transcription and DNA repair factor IIH subunit TFB4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 100827851 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 104581277 general transcription and DNA repair factor IIH subunit TFB5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 100833383 cyclin-dependent kinase D-1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 100830061 cyclin-H1-1 isoform X1 K06634 CCNH; cyclin H
E 100842017 uncharacterized protein LOC100842017 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 100823414 uncharacterized protein LOC100823414 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 100835357 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 100846917 replication protein A 70 kDa DNA-binding subunit C isoform X1 K07466 RFA1; replication factor A1
E 100846308 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 100845662 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 104583264 replication protein A 70 kDa DNA-binding subunit C K07466 RFA1; replication factor A1
E 100828397 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 100821528 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 100837028 replication protein A 32 kDa subunit C isoform X1 K10739 RFA2; replication factor A2
E 112269359 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 100836018 replication protein A 14 kDa subunit K10740 RPA3; replication factor A3
E 100829480 replication protein A 14 kDa subunit K10740 RPA3; replication factor A3
D Other NER factors
E 100833808 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 100820951 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 100824635 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 100843366 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 100836414 MMS19 nucleotide excision repair protein homolog isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 100834318 cullin-3A K03869 CUL3; cullin 3
E 100823589 cullin-3A K03869 CUL3; cullin 3
E 104581441 cullin-3B K03869 CUL3; cullin 3
E 100835048 elongin-C K03872 ELOC; elongin-C
E 100825116 uncharacterized protein LOC100825116 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 100842311 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 100824247 DNA mismatch repair protein MSH3 isoform X2 K08736 MSH3; DNA mismatch repair protein MSH3
E 100837570 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
E 100821236 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 100845473 DNA mismatch repair protein MLH1 isoform X2 K08734 MLH1; DNA mismatch repair protein MLH1
E 100824722 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 100827102 DNA mismatch repair protein MLH3 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 100827521 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 100831775 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E 100831421 protein IWS1 homolog A K03504 POLD3; DNA polymerase delta subunit 3
E 100827592 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
E 100836085 uncharacterized protein LOC100836085 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 100835357 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 100846917 replication protein A 70 kDa DNA-binding subunit C isoform X1 K07466 RFA1; replication factor A1
E 100846308 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 100845662 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 104583264 replication protein A 70 kDa DNA-binding subunit C K07466 RFA1; replication factor A1
E 100828397 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 100821528 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 100837028 replication protein A 32 kDa subunit C isoform X1 K10739 RFA2; replication factor A2
E 112269359 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 100836018 replication protein A 14 kDa subunit K10740 RPA3; replication factor A3
E 100829480 replication protein A 14 kDa subunit K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 100841258 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 100825772 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 100829254 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
E 100821930 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 100837911 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
E 100835863 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 100843467 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 100838825 proliferating cell nuclear antigen isoform X2 K04802 PCNA; proliferating cell nuclear antigen
E 100837914 proliferating cell nuclear antigen isoform X1 K04802 PCNA; proliferating cell nuclear antigen
E 100842034 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 100822831 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 100843366 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 100843892 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 100839664 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 100831252 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 100845007 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 100824411 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA1-core complex
E 100835205 BRCA1-associated RING domain protein 1 isoform X2 K10683 BARD1; BRCA1-associated RING domain protein 1
E 100842545 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 100842826 BRCA1-associated RING domain protein 1 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 100846437 uncharacterized protein LOC100846437 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 100839893 BRISC and BRCA1-A complex member 2 isoform X1 K12173 BRE; BRCA1-A complex subunit BRE
E 100822119 lys-63-specific deubiquitinase BRCC36 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 100829852 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 100841278 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 100825762 DNA topoisomerase 2-binding protein 1 isoform X4 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 100839664 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 100831252 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 100845007 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 100824411 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA complex
E 100832537 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 100826994 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
E 100836496 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 100826994 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
E 100836496 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
E 100846195 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 100846302 DNA repair protein RAD51 homolog 3 isoform X3 K10870 RAD51L2; RAD51-like protein 2
E 100827134 DNA repair protein RAD51 homolog 4 isoform X1 K10871 RAD51L3; RAD51-like protein 3
E 100842954 DNA repair protein XRCC2 homolog K10879 XRCC2; DNA-repair protein XRCC2
E 100831144 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 100842020 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 100825351 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
E 100828030 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 100842951 SNF2 domain-containing protein CLASSY 3 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 100831563 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 100833676 SNF2 domain-containing protein CLASSY 1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 100839149 SNF2 domain-containing protein CLASSY 1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 100828181 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 100845500 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 100846678 protein CHROMATIN REMODELING 35 isoform X4 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 100826958 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 100831864 DNA repair and recombination protein RAD54 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 100837005 mediator of RNA polymerase II transcription subunit 34 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 100824532 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 100821709 ATP-dependent DNA helicase Q-like SIM K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 100837791 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100841605 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100842721 ATP-dependent DNA helicase Q-like 5 isoform X1 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 100837791 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100841605 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100836701 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 100833828 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 100828863 recQ-mediated genome instability protein 1 isoform X1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 100821367 uncharacterized protein LOC100821367 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 100835357 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 100846917 replication protein A 70 kDa DNA-binding subunit C isoform X1 K07466 RFA1; replication factor A1
E 100846308 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 100845662 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 104583264 replication protein A 70 kDa DNA-binding subunit C K07466 RFA1; replication factor A1
E 100828397 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 100821528 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 100837028 replication protein A 32 kDa subunit C isoform X1 K10739 RFA2; replication factor A2
E 112269359 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 100836018 replication protein A 14 kDa subunit K10740 RPA3; replication factor A3
E 100829480 replication protein A 14 kDa subunit K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 100830667 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 100821792 serine/threonine-protein phosphatase 4 regulatory subunit 2 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 100842638 serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 100843760 serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 100842049 uncharacterized protein LOC100842049 isoform X1 K19022 AP5B1; AP-5 complex subunit beta-1
E 100842885 AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 100829556 uncharacterized protein LOC100829556 isoform X1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 100836248 structural maintenance of chromosomes protein 5 isoform X1 K22803 SMC5; structural maintenance of chromosomes protein 5
E 100845329 structural maintenance of chromosomes protein 6A isoform X2 K22804 SMC6; structural maintenance of chromosomes protein 6
E 112270699 LOW QUALITY PROTEIN: non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 100845442 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 100833784 E3 SUMO-protein ligase MMS21 isoform X1 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 100823460 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 100827892 non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 100822599 non-structural maintenance of chromosomes element 4 homolog B K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 100834151 crossover junction endonuclease EME1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 100829380 crossover junction endonuclease MUS81 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 100844668 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 100822740 protein DELETION OF SUV3 SUPPRESSOR 1(I) K10881 SHFM1; 26 proteasome complex subunit DSS1
E 100840417 protein DELETION OF SUV3 SUPPRESSOR 1(I) K10881 SHFM1; 26 proteasome complex subunit DSS1
E 100832723 uncharacterized protein LOC100832723 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 100842997 structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 100839455 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 100836158 flap endonuclease GEN-like 2 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 100829381 uncharacterized protein LOC100829381 isoform X3 K19026 SPG11; spatacsin
E 100832771 uncharacterized protein LOC100832771 isoform X3 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 100841603 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 100829783 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X2 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 100821538 ATPase family AAA domain-containing protein FIGL1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 100835280 zinc finger SWIM domain-containing protein 7 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 104582271 uncharacterized protein LOC104582271 K27803 HROB; homologous recombination OB-fold protein
E 100830613 probable DNA helicase MCM8 isoform X1 K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
E 100846668 probable DNA helicase MCM9 isoform X2 K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
E 100845977 DNA-dependent metalloprotease WSS1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 100824321 single-stranded DNA-binding protein WHY1, chloroplastic K26559 WHY1; single-stranded DNA-binding protein WHY1
E 100825843 single-stranded DNA-binding protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 100829027 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 100830366 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 100839664 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 100831252 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 100845007 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 100844955 putative DNA ligase 4 isoform X1 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 100845947 DNA repair protein XRCC4 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 100827137 DNA polymerase lambda K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 100839576 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 100827144 tyrosyl-DNA phosphodiesterase 2 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 100841299 uncharacterized protein LOC100841299 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 100840872 uncharacterized protein LOC100840872 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 104584910 tyrosyl-DNA phosphodiesterase 2 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 100829204 LOW QUALITY PROTEIN: uncharacterized protein LOC100829204 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 100835661 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 100821064 protein MHF1 homolog K11511 APITD1; centromere protein S
E 100821364 protein MHF2 homolog K15360 STRA13; centromere protein X
E 100823742 uncharacterized protein LOC100823742 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 100837791 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100841605 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100836701 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 100833828 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 100828863 recQ-mediated genome instability protein 1 isoform X1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 100821367 uncharacterized protein LOC100821367 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 100843228 Fanconi anemia group D2 protein K10891 FANCD2; fanconi anemia group D2 protein
E 100835690 Fanconi anemia group I protein homolog K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 100832537 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 100829852 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 100841714 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 100826994 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
E 100836496 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
E 100846302 DNA repair protein RAD51 homolog 3 isoform X3 K10870 RAD51L2; RAD51-like protein 2
E 100834424 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 100833130 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 100823467 phytochrome-associated serine/threonine-protein phosphatase 1 K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 100838896 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 100827579 serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 100822811 serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 100835273 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E 100827594 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 100843892 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 100821109 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 100839865 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 100831516 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 100843632 DNA polymerase zeta catalytic subunit isoform X4 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 100837256 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 100826690 ubiquitin-conjugating enzyme E2 2 isoform X1 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 100845428 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 100842938 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 100838307 DNA repair protein RAD5A isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 100835802 DNA repair protein RAD5B K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 100842603 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 100820845 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 100837317 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 100825911 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 100832554 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 100843467 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 100838825 proliferating cell nuclear antigen isoform X2 K04802 PCNA; proliferating cell nuclear antigen
D 100837914 proliferating cell nuclear antigen isoform X1 K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 100841158 cell cycle checkpoint control protein RAD9A K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 100831912 uncharacterized protein LOC100831912 K10903 HUS1; HUS1 checkpoint protein
D 100829058 uncharacterized protein LOC100829058 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 100820871 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 100825772 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 100829254 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D 100821930 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 100837911 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D 100835863 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 100829058 uncharacterized protein LOC100829058 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 100823556 protein timeless homolog isoform X1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 100821358 uncharacterized protein LOC100821358 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D 100834083 uncharacterized protein LOC100834083 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 100834424 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 100825524 uncharacterized protein LOC100825524 isoform X4 K20403 TTI1; TELO2-interacting protein 1
D 100843113 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 100843356 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 100846687 serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 100845900 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 100824144 14-3-3-like protein GF14-B K06630 YWHAE; 14-3-3 protein epsilon
D 100839161 14-3-3-like protein A isoform X2 K06630 YWHAE; 14-3-3 protein epsilon
D 100821125 14-3-3-like protein GF14-A K06630 YWHAE; 14-3-3 protein epsilon
D 100840843 14-3-3-like protein GF14-E K06630 YWHAE; 14-3-3 protein epsilon
D 100846146 14-3-3-like protein GF14-D K06630 YWHAE; 14-3-3 protein epsilon
D 100824107 14-3-3-like protein GF14-C K06630 YWHAE; 14-3-3 protein epsilon
D 100839340 putative 14-3-3-like protein GF14-H isoform X2 K06630 YWHAE; 14-3-3 protein epsilon
D 100836463 wee1-like protein kinase isoform X1 K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 100831949 serine/threonine-protein kinase Nek4 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 100830559 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 100822355 serine/threonine-protein kinase Nek6 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 100845374 serine/threonine-protein kinase Nek5 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 100840244 serine/threonine-protein kinase Nek3 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 100846273 serine/threonine-protein kinase Nek2 isoform X2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 100824058 uncharacterized protein LOC100824058 K22422 DONSON; protein downstream neighbor of Son
D 100822370 protein downstream neighbor of Son K22422 DONSON; protein downstream neighbor of Son
D 100837561 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 100840006 replication stress response regulator SDE2 K25059 SDE2; replication stress response regulator SDE2
D 100830235 protein DECREASED SIZE EXCLUSION LIMIT 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 100823290 helicase and polymerase-containing protein TEBICHI isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 100832357 uncharacterized protein LOC100832357 K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 100834288 DNA-directed primase/polymerase protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 100844720 uncharacterized protein LOC100844720 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 100821385 uncharacterized protein LOC100821385 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 100843196 uncharacterized protein LOC100843196 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 100832523 DNA cross-link repair protein SNM1 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 100823857 5' exonuclease Apollo K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 100829810 exonuclease V, chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 100824052 endonuclease V K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 100832506 DNA annealing helicase and endonuclease ZRANB3 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 100837987 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 100840586 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 100840115 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 100840993 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 100834578 switch 2 isoform X1 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 100837922 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 100829617 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 100830760 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 100836755 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 100823370 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 100837014 LOW QUALITY PROTEIN: deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 100839518 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 100844446 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 100832889 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 100840293 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 100838499 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 100844435 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 100823568 uncharacterized protein LOC100823568 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 104582586 probable DNA-3-methyladenine glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 100822861 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 100830675 adenine DNA glycosylase isoform X3 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 100832495 uncharacterized protein LOC100832495 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100836431 uncharacterized protein LOC100836431 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100841287 uncharacterized protein LOC100841287 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100826261 uncharacterized protein LOC100826261 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100828020 uncharacterized protein LOC100828020 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100824759 uncharacterized protein LOC100824759 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100833637 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 100825943 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 100825895 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 100836192 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 100838455 LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic-like K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
E 100837972 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 100823216 DNA polymerase I A, chloroplastic K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 100833898 DNA polymerase I A, chloroplastic isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 100823216 DNA polymerase I A, chloroplastic K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 100833898 DNA polymerase I A, chloroplastic isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 6439892 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 6439871 rpoC1; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 106865719 uncharacterized protein LOC106865719 K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 6439777 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 100843920 LOW QUALITY PROTEIN: uncharacterized protein LOC100843920 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 100825922 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 100841100 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 100846188 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 112269760 DNA repair protein recA homolog 1, chloroplastic-like K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 100841100 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 100846188 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 112269760 DNA repair protein recA homolog 1, chloroplastic-like K03553 recA; recombination protein RecA
E 100824150 uncharacterized protein LOC100824150 isoform X1 K04485 radA; DNA repair protein RadA/Sms
E 100840689 LOW QUALITY PROTEIN: uncharacterized protein LOC100840689 K04485 radA; DNA repair protein RadA/Sms
E 100841141 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 100842594 probable DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 100826125 DNA gyrase subunit B, chloroplastic/mitochondrial K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 100826629 uncharacterized protein LOC100826629 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 100841100 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 100846188 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D 112269760 DNA repair protein recA homolog 1, chloroplastic-like K03553 recA; recombination protein RecA
D 100825922 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 100837014 LOW QUALITY PROTEIN: deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2024