+E Transcription factors KO #

  Transcription Factors - Phocaeicola dorei HS1_L_1_B_010

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D EL88_17785 transcriptional regulator K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D EL88_06960 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D EL88_08720 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D EL88_09230 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D EL88_15290 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D EL88_21290 transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D EL88_12470 AraC family transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D EL88_09220 DNA-binding protein K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D EL88_03480 transcriptional regulator K07506 K07506; AraC family transcriptional regulator C LysR family D EL88_24675 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator C DeoR family C LacI family D EL88_08695 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D EL88_23585 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG C GntR family C TetR/AcrR family D EL88_09985 histidine kinase K09017 rutR; TetR/AcrR family transcriptional regulator C Lrp/AsnC family D EL88_17535 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D EL88_01470 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D EL88_06775 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family C MerR family C Fur family D EL88_05360 transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D EL88_03055 iron transporter K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D EL88_04895 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D EL88_10755 Crp/Fnr family transcriptional regulator K21556 malR; CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator C Rrf2 family C ArsR family C XRE family C PadR family D EL88_07185 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D EL88_16375 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D EL88_20450 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D EL88_18640 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D EL88_11325 XRE family transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D EL88_01595 HigA family addiction module antidote protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D EL88_01715 regulatory protein K21557 susR; HTH-type transcriptional regulator, polysaccharide utilization system transcription regulator D EL88_20115 REX family transcriptional regulator K01926 rex; redox-sensing transcriptional repressor D EL88_01090 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D EL88_10965 proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D EL88_08425 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EL88_14195 chromosomal partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EL88_16595 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EL88_17710 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EL88_22330 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D EL88_07925 transcriptional regulator K07735 algH; putative transcriptional regulator D EL88_08730 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D EL88_01850 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024 #
Classification taken and modified from TRANSFAC 7.0