+D GENES KO
#
KEGG Orthology (KO) - Blochmannia endosymbiont of Camponotus modoc
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bem00010]
D M9396_02470 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D M9396_02630 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M9396_01155 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D M9396_02635 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D M9396_00200 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D M9396_01160 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D M9396_00700 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D M9396_01655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D M9396_00130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D M9396_01675 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D M9396_01680 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M9396_00780 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:bem00020]
D M9396_00755 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D M9396_00750 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M9396_00740 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D M9396_00745 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D M9396_00765 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D M9396_00760 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D M9396_00775 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D M9396_00770 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D M9396_00540 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D M9396_03030 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D M9396_01675 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D M9396_01680 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bem00030]
D M9396_02470 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D M9396_00135 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D M9396_00705 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D M9396_00030 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D M9396_02820 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D M9396_03100 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D M9396_01150 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D M9396_00780 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M9396_00680 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D M9396_01155 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D M9396_02630 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions
D M9396_02820 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:bem00051]
D M9396_02630 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M9396_01155 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D M9396_02635 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D M9396_00160 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D M9396_00155 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D M9396_00150 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:bem00052]
D M9396_00780 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M9396_02630 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:bem00500]
D M9396_00780 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M9396_02470 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bem00520]
D M9396_00805 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D M9396_00800 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D M9396_01950 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D M9396_02410 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D M9396_02230 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D M9396_01520 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D M9396_00780 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M9396_00160 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D M9396_00155 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D M9396_00150 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D M9396_02470 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:bem00620]
D M9396_01675 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D M9396_01680 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M9396_00130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D M9396_00990 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D M9396_00965 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D M9396_00970 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D M9396_03210 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D M9396_00280 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D M9396_01315 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D M9396_03030 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D M9396_00540 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D M9396_01780 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bem00630]
D M9396_02535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M9396_02990 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:bem00640]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M9396_00990 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D M9396_00965 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D M9396_00970 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D M9396_03210 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D M9396_00745 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D M9396_00740 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:bem00650]
D M9396_00765 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D M9396_00760 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D M9396_00775 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D M9396_00770 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D M9396_02680 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D M9396_02685 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:bem00660]
D M9396_02680 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D M9396_02685 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D M9396_00745 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D M9396_00740 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D M9396_01790 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D M9396_01795 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D M9396_01785 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bem00562]
D M9396_02995 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D M9396_02635 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bem00190]
D M9396_03220 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D M9396_03225 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D M9396_03230 nuoC; NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D M9396_03235 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D M9396_03240 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D M9396_03245 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D M9396_03250 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D M9396_03255 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D M9396_03260 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D M9396_03265 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D M9396_03270 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D M9396_03275 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D M9396_03280 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D M9396_00765 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D M9396_00760 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D M9396_00775 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D M9396_00770 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D M9396_01225 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D M9396_01220 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D M9396_01215 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D M9396_01210 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D M9396_01205 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D M9396_02430 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D M9396_02420 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D M9396_02425 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D M9396_02435 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D M9396_02415 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D M9396_02450 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D M9396_02440 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D M9396_02445 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D M9396_01995 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:bem00710]
D M9396_01160 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D M9396_00200 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D M9396_01155 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D M9396_03100 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D M9396_01150 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D M9396_02635 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D M9396_02820 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:bem00720]
D M9396_00540 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D M9396_00765 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D M9396_00760 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D M9396_00775 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D M9396_00770 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D M9396_00740 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D M9396_00745 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D M9396_00990 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D M9396_00965 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D M9396_00970 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D M9396_03210 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D M9396_00895 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D M9396_02655 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00680 Methane metabolism [PATH:bem00680]
D M9396_02990 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D M9396_01655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D M9396_01155 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D M9396_02630 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M9396_00700 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D M9396_00490 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism
D M9396_02535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 00920 Sulfur metabolism [PATH:bem00920]
D M9396_03110 cysP; thiosulfate ABC transporter substrate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D M9396_03115 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D M9396_03120 sulfate ABC transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D M9396_03125 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D M9396_01625 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D M9396_01630 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D M9396_01620 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D M9396_02015 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D M9396_01640 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D M9396_01650 cysJ; NADPH-dependent assimilatory sulfite reductase flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D M9396_01645 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D M9396_02625 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D M9396_03140 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D M9396_02465 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D M9396_02650 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bem00061]
D M9396_00990 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D M9396_00965 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D M9396_00970 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D M9396_03210 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D M9396_00385 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D M9396_00375 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D M9396_00370 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D M9396_03195 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D M9396_00380 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D M9396_00295 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D M9396_01015 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D M9396_00275 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bem00561]
D M9396_00365 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D M9396_02160 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D M9396_02130 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:bem00564]
D M9396_02620 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D M9396_02160 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D M9396_02130 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D M9396_01040 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D M9396_02915 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D M9396_02090 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D M9396_00320 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D M9396_01250 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D M9396_00225 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bem00230]
D M9396_00780 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M9396_00680 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D M9396_00435 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D M9396_02895 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D M9396_00920 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D M9396_03035 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D M9396_03005 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D M9396_03040 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D M9396_02545 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D M9396_03295 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D M9396_03290 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D M9396_02040 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D M9396_00910 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D M9396_01820 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D M9396_01620 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D M9396_01625 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D M9396_01630 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D M9396_03060 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D M9396_03055 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D M9396_03050 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:bem00240]
D M9396_01830 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D M9396_01835 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D M9396_01060 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D M9396_03005 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D M9396_01660 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D M9396_00500 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D M9396_02495 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D M9396_03075 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D M9396_03295 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D M9396_03290 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D M9396_00395 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D M9396_02560 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D M9396_00220 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bem00250]
D M9396_00285 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D M9396_02040 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D M9396_00435 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D M9396_02535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M9396_01830 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D M9396_01835 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
C 00260 Glycine, serine and threonine metabolism [PATH:bem00260]
D M9396_01890 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D M9396_02800 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D M9396_01885 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D M9396_01880 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D M9396_02990 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D M9396_00700 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D M9396_00490 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M9396_02915 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D M9396_02700 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D M9396_00240 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D M9396_00245 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:bem00270]
D M9396_02625 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D M9396_03140 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D M9396_02125 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D M9396_02490 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D M9396_01170 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D M9396_01890 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D M9396_02800 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D M9396_02465 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D M9396_02650 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D M9396_02690 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D M9396_00285 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D M9396_00490 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bem00280]
D M9396_02690 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bem00290]
D M9396_02700 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D M9396_01790 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D M9396_01795 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D M9396_01785 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D M9396_02680 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D M9396_02685 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D M9396_02705 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D M9396_02695 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D M9396_02690 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D M9396_01780 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bem00300]
D M9396_01890 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D M9396_02800 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D M9396_03085 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D M9396_01840 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D M9396_01080 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D M9396_03095 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D M9396_02750 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D M9396_01110 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D M9396_01760 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D M9396_01755 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bem00310]
D M9396_00750 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:bem00220]
D M9396_02300 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D M9396_03060 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D M9396_03055 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D M9396_03050 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D M9396_02535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M9396_01830 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D M9396_01835 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D M9396_00285 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:bem00330]
D M9396_01165 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D M9396_00285 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:bem00340]
D M9396_00070 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D M9396_00035 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D M9396_00045 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D M9396_00040 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D M9396_00055 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D M9396_00060 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D M9396_00065 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:bem00350]
D M9396_00285 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D M9396_00060 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:bem00360]
D M9396_00285 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D M9396_00060 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D M9396_00750 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bem00400]
D M9396_01550 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D M9396_02815 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D M9396_00960 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D M9396_01325 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D M9396_02810 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D M9396_00495 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D M9396_03185 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D M9396_00265 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D M9396_00260 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D M9396_00255 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D M9396_00250 trpCF; bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D M9396_00240 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D M9396_00245 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D M9396_01545 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D M9396_01540 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D M9396_00285 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D M9396_00060 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:bem00450]
D M9396_02650 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D M9396_02125 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D M9396_02490 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D M9396_00595 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D M9396_00470 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D M9396_01625 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D M9396_01630 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00460 Cyanoamino acid metabolism
D M9396_02990 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bem00470]
D M9396_00005 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M9396_02660 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D M9396_01745 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D M9396_02750 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D M9396_01110 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:bem00480]
D M9396_02285 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D M9396_00030 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D M9396_00135 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:bem00540]
D M9396_01010 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D M9396_01710 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D M9396_01020 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D M9396_00905 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D M9396_01005 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D M9396_00515 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D M9396_00655 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D M9396_00525 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D M9396_02585 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D M9396_00345 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D M9396_01300 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D M9396_02140 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D M9396_00975 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D M9396_02600 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D M9396_02590 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D M9396_02595 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
D M9396_02410 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:bem00550]
D M9396_02230 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D M9396_01520 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D M9396_01730 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D M9396_01745 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D M9396_01760 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D M9396_00005 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M9396_01755 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D M9396_01045 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D M9396_02150 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D M9396_01750 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D M9396_01735 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D M9396_01670 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D M9396_00875 mrdA; peptidoglycan DD-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D M9396_01765 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:bem00552]
D M9396_02150 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bem00543]
D M9396_02625 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bem00730]
D M9396_03000 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D M9396_01235 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D M9396_01245 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D M9396_00910 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:bem00740]
D M9396_00270 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D M9396_01265 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D M9396_02755 yigB; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D M9396_02135 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D M9396_01260 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D M9396_00575 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D M9396_01860 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D M9396_00530 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:bem00750]
D M9396_00555 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D M9396_03200 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D M9396_00490 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D M9396_01810 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D M9396_02975 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D M9396_01880 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism
D M9396_02945 nadK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:bem00770]
D M9396_02680 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D M9396_02685 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D M9396_02705 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D M9396_02695 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D M9396_01510 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D M9396_02565 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D M9396_02580 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D M9396_01700 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D M9396_02980 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D M9396_02690 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:bem00780]
D M9396_03195 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D M9396_00380 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D M9396_01015 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D M9396_00275 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D M9396_01515 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bem00785]
D M9396_00620 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M9396_01675 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D M9396_01680 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D M9396_00755 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D M9396_00750 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:bem00790]
D M9396_00020 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D M9396_02155 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D M9396_01690 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D M9396_01955 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D M9396_01825 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D M9396_03215 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D M9396_00270 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D M9396_02830 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D M9396_00170 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D M9396_00390 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
C 00670 One carbon pool by folate [PATH:bem00670]
D M9396_01825 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D M9396_00895 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D M9396_02990 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D M9396_02895 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D M9396_01340 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D M9396_02655 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D M9396_01145 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bem00860]
D M9396_03160 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D M9396_02745 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D M9396_02740 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D M9396_01635 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D M9396_01225 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D M9396_01485 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bem00130]
D M9396_02335 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D M9396_02515 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D M9396_00530 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D M9396_01130 FAD-dependent monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D M9396_03300 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D M9396_01135 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D M9396_02505 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D M9396_00825 FAD-dependent monooxygenase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bem00900]
D M9396_01245 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D M9396_01050 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D M9396_01610 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D M9396_00675 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D M9396_01605 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D M9396_03015 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D M9396_01845 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D M9396_00530 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D M9396_01240 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D M9396_01990 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D M9396_01045 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D M9396_03100 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:bem00261]
D M9396_01625 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D M9396_01630 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D M9396_01890 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D M9396_02800 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D M9396_03085 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D M9396_01840 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bem00521]
D M9396_00780 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D M9396_02995 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:bem00401]
D M9396_01545 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D M9396_00285 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D M9396_00060 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D M9396_00265 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D M9396_00260 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D M9396_00375 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D M9396_00380 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D M9396_00275 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D M9396_00385 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bem00999]
D M9396_01170 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D M9396_01325 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D M9396_00530 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D M9396_03060 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D M9396_03055 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D M9396_03050 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bem03020]
D M9396_02885 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D M9396_02890 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D M9396_01350 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bem03010]
D M9396_00505 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D M9396_01070 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D M9396_01445 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D M9396_01355 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D M9396_01390 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D M9396_02030 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D M9396_02840 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D M9396_01405 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D M9396_02210 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D M9396_01480 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D M9396_01360 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D M9396_02835 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D M9396_01365 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D M9396_01410 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D M9396_01910 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D M9396_01570 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D M9396_01430 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D M9396_02025 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D M9396_01455 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D M9396_01865 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D M9396_02170 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D M9396_02870 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D M9396_01460 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D M9396_01475 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D M9396_01470 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D M9396_01415 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D M9396_01400 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D M9396_02880 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D M9396_02020 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D M9396_02875 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D M9396_02865 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D M9396_02215 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D M9396_01425 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D M9396_01380 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D M9396_01440 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D M9396_01345 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D M9396_01395 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D M9396_01555 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D M9396_00635 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D M9396_01985 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D M9396_01450 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D M9396_01465 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D M9396_01420 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D M9396_00015 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D M9396_01980 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D M9396_02570 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D M9396_01435 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D M9396_01385 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D M9396_02645 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D M9396_00360 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D M9396_02575 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D M9396_02390 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D M9396_00640 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D M9396_01370 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D M9396_02900 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D M9396_02910 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D M9396_01320 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bem00970]
D M9396_03165 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M9396_02665 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M9396_02720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M9396_01580 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M9396_03180 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M9396_00890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M9396_00090 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D M9396_02670 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D M9396_00325 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D M9396_00820 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D M9396_02905 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D M9396_02080 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M9396_01495 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M9396_02725 tRNA-His K14226 tRNA-His; tRNA His
D M9396_02460 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D M9396_00330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M9396_00815 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M9396_02730 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M9396_01940 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M9396_02265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M9396_00315 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D M9396_03150 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D M9396_00810 tRNA-Met K14230 tRNA-Met; tRNA Met
D M9396_01935 tRNA-Met K14230 tRNA-Met; tRNA Met
D M9396_02185 tRNA-Ile K14230 tRNA-Met; tRNA Met
D M9396_02120 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D M9396_02735 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M9396_02350 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M9396_00010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M9396_01585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D M9396_00100 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D M9396_00095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D M9396_00310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D M9396_01490 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D M9396_01505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D M9396_01295 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D M9396_02675 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D M9396_01500 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D M9396_00580 tRNA-Val K14237 tRNA-Val; tRNA Val
D M9396_03155 tRNA-Val K14237 tRNA-Val; tRNA Val
D M9396_03160 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D M9396_00795 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D M9396_01595 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D M9396_00120 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D M9396_00290 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D M9396_02365 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D M9396_02360 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D M9396_00650 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D M9396_00485 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D M9396_00900 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D M9396_01340 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D M9396_02295 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D M9396_00855 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D M9396_01855 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D M9396_01115 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D M9396_00115 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D M9396_00980 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D M9396_03020 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D M9396_00630 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D M9396_00625 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D M9396_00550 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D M9396_02825 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bem03060]
D M9396_01375 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D M9396_02855 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D M9396_01945 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D M9396_01275 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D M9396_01270 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D M9396_01280 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D M9396_02400 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D M9396_01705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D M9396_02615 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D M9396_01575 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D M9396_02480 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D M9396_02965 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D M9396_01850 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bem04122]
D M9396_03000 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D M9396_00305 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D M9396_00440 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D M9396_01235 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bem03018]
D M9396_01105 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D M9396_00350 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D M9396_01655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D M9396_01905 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D M9396_01900 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D M9396_02715 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D M9396_02630 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M9396_01875 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D M9396_02105 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bem03030]
D M9396_01305 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M9396_00995 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D M9396_00915 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D M9396_00400 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D M9396_00865 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D M9396_01895 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D M9396_02290 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D M9396_02385 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D M9396_02325 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D M9396_02175 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D M9396_02320 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M9396_01310 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D M9396_01000 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D M9396_02525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D M9396_03145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bem03410]
D M9396_00545 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D M9396_02955 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D M9396_01185 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D M9396_00210 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D M9396_02525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D M9396_03145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bem03420]
D M9396_02525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D M9396_03145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bem03430]
D M9396_00075 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D M9396_02320 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M9396_00995 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D M9396_02385 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D M9396_00915 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D M9396_00865 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D M9396_00400 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D M9396_01305 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M9396_02290 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D M9396_01895 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D M9396_03145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bem03440]
D M9396_02320 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M9396_02525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D M9396_01085 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D M9396_01095 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D M9396_01090 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D M9396_00995 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D M9396_02385 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D M9396_00915 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D M9396_00865 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D M9396_00400 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D M9396_01305 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M9396_02290 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D M9396_01895 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bem02010]
D M9396_03110 cysP; thiosulfate ABC transporter substrate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D M9396_03115 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D M9396_03120 sulfate ABC transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D M9396_03125 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D M9396_00420 lolC; lipoprotein-releasing ABC transporter permease subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D M9396_00430 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D M9396_00425 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D M9396_02280 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D M9396_02275 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D M9396_02250 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D M9396_00510 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS) [PATH:bem02060]
D M9396_03130 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D M9396_03135 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D M9396_00160 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D M9396_00155 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D M9396_00150 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
C 03070 Bacterial secretion system [PATH:bem03070]
D M9396_01275 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D M9396_01270 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D M9396_02855 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D M9396_01945 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D M9396_01375 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D M9396_01280 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D M9396_02400 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D M9396_01705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D M9396_02480 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D M9396_02615 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D M9396_01575 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bem02020]
D M9396_03310 porin K09475 ompC; outer membrane pore protein C
D M9396_01590 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D M9396_02535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bem02024]
D M9396_00265 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D M9396_00260 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D M9396_01550 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D M9396_02330 zur; zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D M9396_00270 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D M9396_01265 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D M9396_02400 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D M9396_02855 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D M9396_01945 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D M9396_01375 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D M9396_01280 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D M9396_01705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D M9396_02480 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D M9396_02615 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D M9396_01575 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D M9396_02180 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D M9396_01655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bem01501]
D M9396_03310 porin K09475 ompC; outer membrane pore protein C
D M9396_00875 mrdA; peptidoglycan DD-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D M9396_01765 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bem01502]
D M9396_00005 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M9396_01755 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D M9396_01750 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D M9396_01735 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bem01503]
D M9396_02070 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D M9396_02520 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D M9396_01010 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bem01000]
C 01001 Protein kinases
C 01009 Protein phosphatases and associated proteins [BR:bem01009]
D M9396_02630 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:bem01002]
D M9396_01850 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D M9396_03040 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D M9396_00335 L,D-transpeptidase family protein K19235 ybiS; L,D-transpeptidase YbiS
D M9396_02345 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D M9396_02285 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D M9396_03095 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D M9396_00125 mepM; murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D M9396_01075 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D M9396_01960 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D M9396_00140 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D M9396_01035 rseP; sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D M9396_02225 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D M9396_01200 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D M9396_00930 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D M9396_02965 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D M9396_00205 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D M9396_00935 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D M9396_00940 tldD; metalloprotease TldD K03568 tldD; TldD protein
D M9396_02045 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D M9396_02050 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:bem01003]
D M9396_01670 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bem01005]
D M9396_01010 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D M9396_01005 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D M9396_01710 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D M9396_01020 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D M9396_00905 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D M9396_00515 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D M9396_00345 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D M9396_02585 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D M9396_00655 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D M9396_00525 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D M9396_02590 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D M9396_02595 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D M9396_01300 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D M9396_00975 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D M9396_02140 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D M9396_02600 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bem01011]
D M9396_02230 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D M9396_01520 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D M9396_01730 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D M9396_01745 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D M9396_01760 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D M9396_00005 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D M9396_02660 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D M9396_01750 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D M9396_01735 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D M9396_02150 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D M9396_00110 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D M9396_01670 mrcB; bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D M9396_00875 mrdA; peptidoglycan DD-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D M9396_01765 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D M9396_00335 L,D-transpeptidase family protein K19235 ybiS; L,D-transpeptidase YbiS
D M9396_00125 mepM; murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D M9396_00450 transglycosylase SLT domain-containing protein K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D M9396_02070 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D M9396_00585 murein lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:bem01004]
D M9396_00375 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D M9396_00370 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D M9396_03195 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D M9396_00380 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D M9396_00295 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D M9396_01015 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D M9396_00275 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D M9396_00365 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D M9396_02160 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D M9396_02130 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:bem01006]
D M9396_01240 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D M9396_01990 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D M9396_01045 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D M9396_02065 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D M9396_02335 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D M9396_01225 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bem01007]
D M9396_03160 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D M9396_00795 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D M9396_00550 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D M9396_02825 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D M9396_00900 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D M9396_00115 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D M9396_01855 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D M9396_02295 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D M9396_00855 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D M9396_01115 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D M9396_00120 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D M9396_00290 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D M9396_03020 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D M9396_02365 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D M9396_02360 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D M9396_00485 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D M9396_00980 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D M9396_00650 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D M9396_01595 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D M9396_00630 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D M9396_00625 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D M9396_00285 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D M9396_00060 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D M9396_02690 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D M9396_00490 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bem00194]
D M9396_02415 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D M9396_02420 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D M9396_02425 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D M9396_02430 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D M9396_02435 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D M9396_02440 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D M9396_02445 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D M9396_02450 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bem03000]
D M9396_00560 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D M9396_02330 zur; zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D M9396_00445 mntR; manganese-binding transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D M9396_01515 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D M9396_01175 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D M9396_01695 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:bem03021]
D M9396_01350 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D M9396_02885 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D M9396_02890 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D M9396_02180 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D M9396_02485 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D M9396_01930 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D M9396_01255 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D M9396_02860 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D M9396_01695 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D M9396_01970 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D M9396_02715 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bem03019]
D M9396_00350 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D M9396_02970 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D M9396_02085 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D M9396_01900 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D M9396_01655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D M9396_01905 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D M9396_02715 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D M9396_02630 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D M9396_01875 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D M9396_02105 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D M9396_01105 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D M9396_01590 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:bem03011]
D M9396_00505 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D M9396_01070 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D M9396_01445 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D M9396_01355 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D M9396_01390 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D M9396_02030 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D M9396_02840 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D M9396_01405 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D M9396_02210 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D M9396_01480 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D M9396_01360 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D M9396_02835 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D M9396_01365 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D M9396_01410 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D M9396_01910 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D M9396_01570 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D M9396_01430 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D M9396_02025 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D M9396_01455 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D M9396_01865 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D M9396_02170 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D M9396_02870 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D M9396_01460 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D M9396_01475 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D M9396_01470 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D M9396_01415 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D M9396_01400 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D M9396_02020 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D M9396_02875 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D M9396_02865 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D M9396_02880 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D M9396_02215 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D M9396_01425 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D M9396_01380 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D M9396_01440 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D M9396_01345 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D M9396_01395 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D M9396_01555 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D M9396_00635 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D M9396_01985 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D M9396_01450 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D M9396_01465 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D M9396_01420 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D M9396_01980 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D M9396_02570 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D M9396_01435 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D M9396_01385 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D M9396_02645 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D M9396_00360 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D M9396_02575 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D M9396_02390 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D M9396_00640 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D M9396_01370 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D M9396_00015 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D M9396_01320 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D M9396_02900 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D M9396_02910 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bem03009]
D M9396_02970 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D M9396_02085 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D M9396_01975 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D M9396_01695 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D M9396_01930 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D M9396_01255 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D M9396_02860 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D M9396_01815 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D M9396_02475 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D M9396_01775 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D M9396_02200 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D M9396_02035 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D M9396_01965 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D M9396_03010 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D M9396_00355 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D M9396_01530 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D M9396_01565 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D M9396_03190 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D M9396_00350 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D M9396_01180 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D M9396_01900 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D M9396_03025 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D M9396_02055 hflX; GTPase HflX K03665 hflX; GTPase
D M9396_01330 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D M9396_01920 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D M9396_00870 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D M9396_00840 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D M9396_00690 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:bem03016]
D M9396_02145 tRNA CCA-pyrophosphorylase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D M9396_03160 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D M9396_00980 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D M9396_01855 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D M9396_00855 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D M9396_00795 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D M9396_00115 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D M9396_01115 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D M9396_00120 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D M9396_01595 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D M9396_00290 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D M9396_00650 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D M9396_00485 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D M9396_00900 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D M9396_02295 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D M9396_03020 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D M9396_00630 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D M9396_00625 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D M9396_00550 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D M9396_02825 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D M9396_00410 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D M9396_03205 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D M9396_01915 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D M9396_03000 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D M9396_01330 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D M9396_02065 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D M9396_02405 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D M9396_02455 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D M9396_02015 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D M9396_02395 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D M9396_00565 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D M9396_02365 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D M9396_02360 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D M9396_02985 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D M9396_01560 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D M9396_00440 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D M9396_00305 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D M9396_01125 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D M9396_01285 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D M9396_01235 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D M9396_00985 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D M9396_00175 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D M9396_02165 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D M9396_02075 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D M9396_01905 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bem03012]
D M9396_01925 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D M9396_00645 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D M9396_01065 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D M9396_02850 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D M9396_02845 fusA; elongation factor G K02355 fusA; elongation factor G
D M9396_00665 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D M9396_01055 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D M9396_00660 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D M9396_00685 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D M9396_00465 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D M9396_02100 efp; elongation factor P K02356 efp; elongation factor P
D M9396_01120 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:bem03110]
D M9396_01525 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D M9396_01195 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D M9396_01875 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D M9396_02105 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D M9396_01870 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D M9396_02950 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D M9396_02375 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D M9396_02110 co-chaperone GroES K04078 groES; chaperonin GroES
D M9396_01960 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D M9396_02450 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D M9396_02615 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D M9396_01805 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D M9396_02710 trxA; thioredoxin K03671 TXN; thioredoxin
D M9396_02610 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D M9396_00570 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D M9396_02520 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D M9396_00195 dsbB; disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
C 04131 Membrane trafficking [BR:bem04131]
D M9396_03005 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D M9396_00200 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D M9396_00700 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D M9396_00130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:bem03032]
D M9396_01310 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D M9396_02325 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D M9396_02175 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D M9396_02320 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M9396_00995 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D M9396_02385 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D M9396_02290 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D M9396_00865 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D M9396_00400 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D M9396_01305 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M9396_00915 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D M9396_01895 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D M9396_01000 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D M9396_02525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D M9396_03145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D M9396_03305 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D M9396_02380 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C 03036 Chromosome and associated proteins [BR:bem03036]
D M9396_02970 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D M9396_00215 hns; DNA-binding transcriptional regulator H-NS K03746 hns; DNA-binding protein H-NS
D M9396_00300 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ
D M9396_01720 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D M9396_01615 septum formation initiator family protein K05589 ftsB; cell division protein FtsB
D M9396_01765 ftsI; peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D M9396_00475 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D M9396_01770 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D M9396_01725 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D M9396_01740 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D M9396_01715 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D M9396_01140 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D M9396_02070 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D M9396_00190 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D M9396_00185 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D M9396_00180 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D M9396_00955 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D M9396_00950 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D M9396_00945 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D M9396_00880 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D M9396_02455 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D M9396_02530 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:bem03400]
D M9396_02955 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D M9396_01185 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D M9396_00545 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D M9396_02560 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D M9396_00210 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D M9396_03145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D M9396_02525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D M9396_02885 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D M9396_02890 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D M9396_01350 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D M9396_00075 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D M9396_00995 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D M9396_02385 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D M9396_02290 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D M9396_00865 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D M9396_00400 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D M9396_01305 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D M9396_00915 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D M9396_01895 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D M9396_02320 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M9396_01085 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D M9396_01095 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D M9396_01090 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D M9396_03305 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D M9396_02380 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D M9396_00215 hns; DNA-binding transcriptional regulator H-NS K03746 hns; DNA-binding protein H-NS
D M9396_03295 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D M9396_03290 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:bem03029]
D M9396_01925 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D M9396_00645 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D M9396_01065 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D M9396_02850 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D M9396_02845 fusA; elongation factor G K02355 fusA; elongation factor G
D M9396_00550 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D M9396_00855 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D M9396_00120 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D M9396_00115 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D M9396_02320 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D M9396_01030 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D M9396_01875 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D M9396_02950 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D M9396_02105 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D M9396_02110 co-chaperone GroES K04078 groES; chaperonin GroES
D M9396_01870 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D M9396_03000 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D M9396_00570 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D M9396_01225 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D M9396_02400 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bem02000]
D M9396_00510 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D M9396_03110 cysP; thiosulfate ABC transporter substrate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D M9396_03115 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D M9396_03120 sulfate ABC transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D M9396_03125 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D M9396_02255 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D M9396_02260 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D M9396_02280 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D M9396_02275 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D M9396_02250 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D M9396_00420 lolC; lipoprotein-releasing ABC transporter permease subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D M9396_00430 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D M9396_00425 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D M9396_00605 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D M9396_00105 mdtH; multidrug efflux MFS transporter MdtH K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D M9396_03130 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D M9396_03135 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D M9396_00160 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D M9396_00155 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D M9396_00150 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D M9396_02095 mscM; miniconductance mechanosensitive channel MscM K22051 mscM; miniconductance mechanosensitive channel
D M9396_00735 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D M9396_00730 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR
D M9396_02785 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D M9396_03310 porin K09475 ompC; outer membrane pore protein C
D M9396_00460 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D M9396_01030 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D M9396_01535 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D M9396_02005 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA
D M9396_02000 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D M9396_02240 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D M9396_01800 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D M9396_00860 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D M9396_00845 corC; CNNM family magnesium/cobalt transport protein CorC K06189 corC; hemolysin (HlyC) family protein
D M9396_02920 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D M9396_02340 inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D M9396_02310 gltP; glutamate/aspartate:proton symporter GltP K11102 gltP; proton glutamate symport protein
D M9396_02315 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D M9396_03170 NupC/NupG family nucleoside CNT transporter K11535 nupC; nucleoside transport protein
D M9396_03175 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D M9396_00110 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D M9396_01740 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D M9396_00230 TonB family protein K03832 tonB; periplasmic protein TonB
D M9396_00715 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D M9396_00720 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
C 02044 Secretion system [BR:bem02044]
D M9396_01705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D M9396_02615 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D M9396_01275 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D M9396_02855 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D M9396_01270 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D M9396_01945 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D M9396_01375 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D M9396_01575 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D M9396_02480 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D M9396_01280 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D M9396_02400 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bem04812]
D M9396_00955 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D M9396_01715 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D M9396_01720 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D M9396_00190 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D M9396_00185 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D M9396_00180 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
C 04147 Exosome [BR:bem04147]
D M9396_01655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D M9396_00200 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D M9396_01160 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D M9396_00130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D M9396_01290 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D M9396_02105 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D M9396_01875 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D M9396_02470 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D M9396_03035 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D M9396_02850 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D M9396_00410 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D M9396_00910 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D M9396_00920 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D M9396_02535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D M9396_02895 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D M9396_01685 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D M9396_00135 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D M9396_02635 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D M9396_00700 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bem02048]
D M9396_01715 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D M9396_00955 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D M9396_03160 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D M9396_03000 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bem03100]
D M9396_03165 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M9396_02665 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D M9396_02720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M9396_01580 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M9396_03180 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M9396_00890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D M9396_00090 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D M9396_02670 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D M9396_00325 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D M9396_00820 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D M9396_02905 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D M9396_02080 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M9396_01495 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D M9396_02725 tRNA-His K14226 tRNA-His; tRNA His
D M9396_02460 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D M9396_00330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M9396_00815 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M9396_02730 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M9396_01940 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M9396_02265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D M9396_00315 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D M9396_03150 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D M9396_00810 tRNA-Met K14230 tRNA-Met; tRNA Met
D M9396_01935 tRNA-Met K14230 tRNA-Met; tRNA Met
D M9396_02185 tRNA-Ile K14230 tRNA-Met; tRNA Met
D M9396_02120 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D M9396_02735 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M9396_02350 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M9396_00010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D M9396_01585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D M9396_00100 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D M9396_00095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D M9396_00310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D M9396_01490 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D M9396_01505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D M9396_01295 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D M9396_02675 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D M9396_01500 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D M9396_00580 tRNA-Val K14237 tRNA-Val; tRNA Val
D M9396_03155 tRNA-Val K14237 tRNA-Val; tRNA Val
D M9396_02900 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D M9396_02910 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D M9396_01320 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D M9396_03080 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D M9396_02640 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D M9396_00850 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D M9396_01100 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D M9396_00405 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D M9396_00785 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D M9396_01335 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D M9396_02305 Rid family detoxifying hydrolase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D M9396_00085 gutQ; arabinose-5-phosphate isomerase GutQ K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D M9396_03285 yfaE; class I ribonucleotide reductase maintenance protein YfaE K11107 yfaE; ferredoxin
D M9396_00790 fldA; flavodoxin FldA K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D M9396_02510 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D M9396_00145 cspE; transcription antiterminator/RNA stability regulator CspE K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D M9396_03065 urease accessory protein UreF K03188 ureF; urease accessory protein
D M9396_03070 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D M9396_03045 urease accessory protein UreD K03190 ureD; urease accessory protein
D M9396_02930 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D M9396_02805 NfuA family Fe-S biogenesis protein K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D M9396_02500 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
C 99993 Cell motility
D M9396_00415 penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D M9396_00835 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D M9396_00480 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D M9396_00670 lolB; lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB
D M9396_01025 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D M9396_01600 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
C 99994 Others
D M9396_02115 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D M9396_01665 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D M9396_00615 sufA; Fe-S cluster assembly scaffold SufA K05997 sufA; Fe-S cluster assembly protein SufA
D M9396_00610 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D M9396_00600 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D M9396_00590 sufE; cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
C 99997 Function unknown
D M9396_00695 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D M9396_00520 Trm112 family protein K09791 K09791; uncharacterized protein
D M9396_00080 tmaR; PTS system regulator TmaR K09802 K09802; uncharacterized protein
D M9396_02220 YhcB family protein K09908 K09908; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2024