+E Transcription factors KO #

  Transcription Factors - Bacteroides fragilis 638R

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D BF638R_3221 putative AraC-family regulatory protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D BF638R_2193 putative AraC family transcriptional regulatory protein K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D BF638R_3341 putative AraC-family regulatory protein K13652 K13652; AraC family transcriptional regulator D BF638R_2937 putative AraC-family regulatory protein K13652 K13652; AraC family transcriptional regulator C LysR family D BF638R_1334 oxyR; redox-sensitive transcriptional activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D BF638R_1239 putative transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family C LacI family D BF638R_1759 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BF638R_2729 putative LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BF638R_3171 putative LacI-family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG C GntR family C TetR/AcrR family C Lrp/AsnC family D BF638R_3550 putative AsnC family regulatory protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D BF638R_4469 putative AsnC-family transcriptional regulatory protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D BF638R_2233 putative AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D BF638R_3159 putative MarR-family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family C Fur family D BF638R_3276 putative iron storage-related regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D BF638R_1299 conserved hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D BF638R_3026 putative iron uptake-related regulatory protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D BF638R_1017 putative FNR-family transcriptional regulator protein K21556 malR; CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator D BF638R_2263 putative regulatory protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator C Rrf2 family C ArsR family D BF638R_4200 putative ArsR Transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family C PadR family D BF638R_2624 putative PadR-family transcriptional regulatory protein K10947 K10947; PadR family transcriptional regulator C Other families D BF638R_3840 conserved hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D BF638R_0877 putative regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D BF638R_3826 putative antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D BF638R_0675 putative biotin/lipoate A/B protein ligase family protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D BF638R_1533 putative helix-turn-helix releated protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D BF638R_3857 conserved hypothetical protein K01926 rex; redox-sensing transcriptional repressor D BF638R_4223 putative DNA-binding protein K07727 K07727; putative transcriptional regulator D BF638R_1163 putative DNA-binding protein K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D BF638R_0738 parB; putative ParB-like chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BF638R_4378 putative ParB-family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BF638R_0532 argR; putative arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D BF638R_2179 putative transcriptional regulator K07735 algH; putative transcriptional regulator D BF638R_2380 putative regulatory protein K06204 dksA; RNA polymerase-binding transcription factor D BF638R_0314 mraZ; putative cell division protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0