+D GENES KO
#
KEGG Orthology (KO) - Butyrivibrio fibrisolvens
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bfi00010]
D CIY_06820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CIY_28610 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CIY_25040 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CIY_33570 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_31360 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_29440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_02630 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CIY_14550 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CIY_14530 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CIY_14540 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CIY_14580 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CIY_09180 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CIY_13020 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CIY_10260 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CIY_31450 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CIY_06840 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CIY_10220 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_04690 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_14820 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CIY_11010 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CIY_11020 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CIY_15670 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:bfi00020]
D CIY_14810 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CIY_30960 Aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CIY_17990 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CIY_30660 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CIY_30670 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CIY_14820 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CIY_10260 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:bfi00030]
D CIY_28610 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CIY_17330 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D CIY_08730 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CIY_06330 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CIY_06850 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CIY_06860 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CIY_08310 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CIY_10310 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CIY_34780 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CIY_04700 Phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D CIY_25330 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CIY_10220 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_04690 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_06670 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CIY_24190 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CIY_24150 Sugar kinases, ribokinase family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CIY_02630 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CIY_25040 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CIY_33570 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_31360 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_29440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:bfi00040]
D CIY_24160 D-glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D CIY_24180 D-mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D CIY_24170 Mannitol-1-phosphate/altronate dehydrogenases K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D CIY_26160 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CIY_08340 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CIY_08730 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CIY_06330 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CIY_08300 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D CIY_11310 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D CIY_09040 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CIY_11300 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D CIY_11320 L-rhamnulose 1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D CIY_06310 Threonine dehydrogenase and related Zn-dependent dehydrogenases K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CIY_06320 4-diphosphocytidyl-2-methyl-D-erithritol synthase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:bfi00051]
D CIY_12040 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CIY_23540 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CIY_11300 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D CIY_11320 L-rhamnulose 1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D CIY_25040 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CIY_33570 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_31360 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_29440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_05880 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CIY_06310 Threonine dehydrogenase and related Zn-dependent dehydrogenases K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CIY_02630 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CIY_14550 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CIY_10310 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CIY_34780 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CIY_05870 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:bfi00052]
D CIY_06840 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CIY_29760 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CIY_20640 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CIY_10220 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_04690 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_06820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CIY_29790 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CIY_15760 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CIY_03780 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D CIY_28160 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CIY_15800 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CIY_22650 Melibiase. K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CIY_25040 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CIY_33570 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_31360 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_29440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_23550 Beta-fructosidases (levanase/invertase) K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CIY_23650 Beta-fructosidases (levanase/invertase) K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CIY_20130 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CIY_05460 Glycosidases K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CIY_23290 Alpha-glucosidases, family 31 of glycosyl hydrolases K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CIY_31210 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:bfi00053]
D CIY_26160 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CIY_08340 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:bfi00500]
D CIY_20140 PTS system sucrose-specific IIA component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12) K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CIY_23550 Beta-fructosidases (levanase/invertase) K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CIY_23650 Beta-fructosidases (levanase/invertase) K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CIY_20130 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CIY_05460 Glycosidases K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CIY_23290 Alpha-glucosidases, family 31 of glycosyl hydrolases K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CIY_12020 Glycosidases K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D CIY_10090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_10240 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_07250 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_32940 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_32960 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_34510 aryl-beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D CIY_23350 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_16470 Glycosyl hydrolase family 9. K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_33540 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_10500 Glycosyl hydrolase family 9./N-terminal ig-like domain of cellulase. K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_21980 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_21950 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_05430 cellobiose phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D CIY_07280 hypothetical protein K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D CIY_12070 hypothetical protein K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D CIY_11010 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CIY_11020 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CIY_09130 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CIY_09140 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CIY_09150 hypothetical protein K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CIY_06620 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CIY_06630 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CIY_19790 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D CIY_31010 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CIY_00330 glycogen/starch/alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CIY_26510 glycogen/starch/alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CIY_12200 Glycosidases K01176 AMY; alpha-amylase [EC:3.2.1.1]
D CIY_11140 Glycosidases K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D CIY_31210 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CIY_07220 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CIY_02220 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D CIY_19230 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D CIY_21400 Type II secretory pathway, pullulanase PulA and related glycosidases K01214 ISA; isoamylase [EC:3.2.1.68]
D CIY_23020 PTS system trehalose-specific IIB component, Glc family (TC 4.A.1.2.4)/PTS system trehalose-specific IIC component, Glc family (TC 4.A.1.2.4)/PTS system trehalose-specific IIA component, Glc family (TC 4.A.1.2.4) K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CIY_10220 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_04690 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_06820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CIY_28610 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CIY_12040 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CIY_23540 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bfi00520]
D CIY_19220 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CIY_12040 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CIY_23540 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CIY_26250 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CIY_28230 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CIY_16790 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CIY_25470 UDP-glucose pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D CIY_06420 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CIY_02690 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CIY_26610 Predicted nucleoside-diphosphate sugar epimerases K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CIY_12790 Alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D CIY_14200 hypothetical protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D CIY_23730 Cellobiohydrolase A (1,4-beta-cellobiosidase A) K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D CIY_10110 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D CIY_15670 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CIY_06820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CIY_10220 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_04690 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_26160 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CIY_29760 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CIY_20640 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CIY_28160 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CIY_28610 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CIY_09130 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CIY_09140 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CIY_09150 hypothetical protein K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CIY_06620 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CIY_06630 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:bfi00620]
D CIY_10260 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CIY_02060 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CIY_20620 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CIY_33590 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CIY_09180 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CIY_07730 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CIY_07690 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CIY_07700 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CIY_07720 Acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CIY_16350 Acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CIY_24590 Hydrogenase maturation factor K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CIY_31450 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CIY_09880 Lactoylglutathione lyase and related lyases K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CIY_09320 Zn-dependent hydrolases, including glyoxylases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CIY_33080 Malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CIY_18070 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CIY_18060 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CIY_30660 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CIY_30670 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CIY_14820 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CIY_13020 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CIY_28200 Isopropylmalate/homocitrate/citramalate synthases K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bfi00630]
D CIY_14810 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CIY_30960 Aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CIY_17440 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CIY_19990 Predicted phosphatases K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CIY_02620 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15190 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15220 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_09420 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CIY_11260 Alcohol dehydrogenase, class IV K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D CIY_24190 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:bfi00640]
D CIY_20620 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CIY_33590 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CIY_02060 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CIY_01180 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CIY_07730 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CIY_07690 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CIY_07700 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CIY_07720 Acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CIY_31450 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CIY_19470 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CIY_28570 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CIY_11260 Alcohol dehydrogenase, class IV K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:bfi00650]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CIY_01190 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CIY_00370 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CIY_01180 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CIY_18060 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CIY_18050 Acetyl/propionyl-CoA carboxylase, alpha subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CIY_18040 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CIY_02060 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CIY_10260 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CIY_01270 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CIY_33240 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CIY_01260 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CIY_16990 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:bfi00660]
D CIY_01270 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CIY_33240 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CIY_01260 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CIY_16990 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CIY_22180 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CIY_22200 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CIY_22190 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CIY_22210 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CIY_33260 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bfi00562]
D CIY_07500 Phosphatidylinositol-specific phospholipase C, X domain. K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D CIY_15620 Predicted dehydrogenases and related proteins K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D CIY_14550 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bfi00190]
D CIY_12810 NADH dehydrogenase, FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CIY_29550 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CIY_08460 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CIY_29530 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CIY_08450 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CIY_29540 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CIY_29560 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CIY_08470 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CIY_29520 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CIY_08420 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CIY_29580 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CIY_08240 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CIY_33100 Inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D CIY_20700 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:bfi00710]
D CIY_14540 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CIY_14530 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CIY_02630 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CIY_06850 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CIY_06860 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CIY_10310 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CIY_34780 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CIY_14550 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CIY_08730 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CIY_06330 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CIY_08310 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CIY_14820 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CIY_13020 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:bfi00720]
D CIY_10260 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CIY_13020 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CIY_30660 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CIY_30670 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CIY_17990 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CIY_30960 Aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CIY_07730 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CIY_07690 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CIY_07700 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CIY_07720 Acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CIY_19760 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CIY_22080 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CIY_03310 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CIY_33590 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CIY_20620 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:bfi00680]
D CIY_09420 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CIY_02630 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CIY_25040 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CIY_33570 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_31360 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_29440 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CIY_20620 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CIY_33590 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CIY_14580 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CIY_33220 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CIY_33230 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CIY_02430 phosphoserine phosphatase/phosphoserine:homoserine phosphotransferase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:bfi00910]
D CIY_11720 Nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CIY_11690 Nitrogenase subunit NifH (ATPase) K02588 nifH; nitrogenase iron protein NifH
D CIY_24100 Dioxygenases related to 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CIY_14620 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CIY_02620 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15190 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15220 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15160 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CIY_15170 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CIY_15730 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CIY_26230 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:bfi00920]
D CIY_11730 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D CIY_11750 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CIY_11780 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CIY_17840 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CIY_13860 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CIY_11850 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits K00385 asrC; anaerobic sulfite reductase subunit C
D CIY_03320 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CIY_28340 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CIY_11960 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CIY_16110 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bfi00061]
D CIY_07730 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CIY_07690 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CIY_07700 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CIY_07720 Acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CIY_04640 Acyl carrier protein K02078 acpP; acyl carrier protein
D CIY_07680 acyl carrier protein K02078 acpP; acyl carrier protein
D CIY_25210 Phosphopantetheine attachment site. K02078 acpP; acyl carrier protein
D CIY_20560 acyl carrier protein K02078 acpP; acyl carrier protein
D CIY_07770 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CIY_07790 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CIY_04030 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CIY_07780 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CIY_07800 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CIY_07760 Dioxygenases related to 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CIY_04650 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bfi00071]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CIY_01180 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CIY_04650 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bfi00561]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CIY_02410 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CIY_20570 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CIY_20220 conserved hypothetical integral membrane protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CIY_03980 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CIY_18890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CIY_15800 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CIY_22650 Melibiase. K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:bfi00564]
D CIY_20210 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CIY_02390 Predicted dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CIY_20220 conserved hypothetical integral membrane protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CIY_03980 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CIY_18890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CIY_01940 Lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D CIY_26420 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CIY_20790 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CIY_27750 Phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CIY_29490 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CIY_18510 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:bfi00600]
D CIY_29790 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CIY_15760 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CIY_15800 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CIY_22650 Melibiase. K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CIY_08750 Lysophospholipase L1 and related esterases K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bfi00230]
D CIY_15980 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CIY_01780 NUDIX domain. K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CIY_10220 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_04690 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_06670 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CIY_14600 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CIY_33850 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CIY_33860 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CIY_33870 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CIY_33880 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CIY_14590 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CIY_14610 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CIY_17770 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CIY_17760 IMP cyclohydrolase-like protein. K11176 purO; IMP cyclohydrolase [EC:3.5.4.10]
D CIY_10460 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CIY_22480 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CIY_16520 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CIY_01240 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CIY_09750 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CIY_05490 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CIY_10250 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CIY_24480 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CIY_19060 ADP-ribose pyrophosphatase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D CIY_09550 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CIY_08400 Cytosine deaminase and related metal-dependent hydrolases K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CIY_18470 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CIY_18480 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CIY_30230 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CIY_31440 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1]
D CIY_09310 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CIY_20720 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CIY_25000 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CIY_19900 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CIY_02890 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CIY_26230 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:bfi00240]
D CIY_22920 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CIY_22930 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CIY_08620 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CIY_08600 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CIY_00500 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CIY_00470 dihydroorotate dehydrogenase (subfamily 1) family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CIY_00480 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CIY_33910 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CIY_00490 orotidine 5'-phosphate decarboxylase, subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CIY_20830 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CIY_17420 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CIY_19060 ADP-ribose pyrophosphatase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D CIY_31190 CTP synthase (UTP-ammonia lyase) K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CIY_18110 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CIY_10600 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CIY_31400 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CIY_22480 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CIY_16520 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CIY_03520 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CIY_19730 thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D CIY_29620 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CIY_20020 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CIY_26470 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CIY_01290 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bfi00250]
D CIY_29840 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CIY_04250 Aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CIY_31600 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D CIY_04320 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CIY_15180 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CIY_21890 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CIY_16700 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CIY_19900 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CIY_14610 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CIY_08620 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CIY_08600 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CIY_15160 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CIY_15170 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CIY_15730 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CIY_14620 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CIY_02620 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15190 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15220 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_22920 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CIY_22930 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CIY_26250 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CIY_14600 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bfi00260]
D CIY_00510 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CIY_16710 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CIY_02450 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CIY_02430 phosphoserine phosphatase/phosphoserine:homoserine phosphotransferase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D CIY_14740 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CIY_02250 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CIY_09420 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CIY_14580 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CIY_33220 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CIY_33230 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CIY_27750 Phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CIY_23670 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CIY_23720 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CIY_20500 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CIY_15080 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CIY_15060 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:bfi00270]
D CIY_03320 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CIY_28340 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CIY_11960 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CIY_24120 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CIY_22400 Methionine synthase I (cobalamin-dependent), methyltransferase domain K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CIY_05630 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CIY_11680 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CIY_29970 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CIY_11760 Nucleoside phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CIY_04720 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CIY_09750 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CIY_22870 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D CIY_16170 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CIY_04730 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CIY_00510 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CIY_16710 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CIY_02450 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CIY_16110 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CIY_11840 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CIY_11950 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CIY_26570 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CIY_09380 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CIY_29840 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CIY_31450 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CIY_23670 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CIY_23720 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CIY_33220 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CIY_33230 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bfi00280]
D CIY_09380 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CIY_01180 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bfi00290]
D CIY_20500 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CIY_22180 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CIY_22200 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CIY_22190 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CIY_22210 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CIY_33260 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CIY_01270 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CIY_33240 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CIY_01260 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CIY_16990 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CIY_17000 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CIY_33250 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CIY_09380 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CIY_28200 Isopropylmalate/homocitrate/citramalate synthases K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bfi00300]
D CIY_02450 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CIY_00510 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CIY_16710 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CIY_03570 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CIY_28870 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CIY_07450 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CIY_21840 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CIY_28890 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CIY_02000 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CIY_24910 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CIY_14290 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D CIY_28880 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CIY_03990 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bfi00310]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:bfi00220]
D CIY_28810 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CIY_21890 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CIY_16700 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CIY_02620 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15190 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15220 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_22920 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CIY_22930 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CIY_26230 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CIY_14620 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CIY_29840 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CIY_21860 glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CIY_21870 N-acetylglutamate synthase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D CIY_21850 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CIY_21880 N-acetyl-gamma-glutamyl-phosphate reductase, common form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CIY_21840 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:bfi00330]
D CIY_29980 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CIY_29930 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CIY_29920 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D CIY_29970 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CIY_09640 Acetyltransferase (GNAT) family. K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CIY_09660 Acetyltransferases, including N-acetylases of ribosomal proteins K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CIY_23380 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CIY_18230 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CIY_18280 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CIY_29840 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:bfi00340]
D CIY_18660 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CIY_18650 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CIY_18710 phosphoribosyl-ATP pyrophosphohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CIY_17710 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CIY_17720 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CIY_18700 Imidazoleglycerol-phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CIY_18690 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CIY_23080 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CIY_14520 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CIY_04910 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CIY_18670 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:bfi00350]
D CIY_29840 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CIY_23080 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:bfi00360]
D CIY_01190 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CIY_29840 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CIY_23080 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CIY_16940 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CIY_27770 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism [PATH:bfi00380]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bfi00400]
D CIY_16010 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CIY_19400 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D CIY_08850 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CIY_14500 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CIY_17940 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CIY_17340 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CIY_15100 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CIY_15110 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CIY_15030 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CIY_15060 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CIY_15040 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CIY_15080 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CIY_20730 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CIY_02460 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D CIY_17950 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CIY_29840 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CIY_23080 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:bfi00410]
D CIY_23680 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CIY_23690 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CIY_01180 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:bfi00430]
D CIY_33590 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CIY_20620 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:bfi00450]
D CIY_24120 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CIY_22400 Methionine synthase I (cobalamin-dependent), methyltransferase domain K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CIY_02540 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CIY_12440 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CIY_30800 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bfi00460]
D CIY_10090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_10240 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_07250 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_32940 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_32960 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_34510 aryl-beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D CIY_04320 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CIY_09420 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bfi00470]
D CIY_22240 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CIY_04000 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CIY_31600 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D CIY_28890 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CIY_24910 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:bfi00480]
D CIY_29450 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CIY_17990 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CIY_08370 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D CIY_29970 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:bfi00511]
D CIY_29790 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D CIY_15760 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis [PATH:bfi00540]
D CIY_03550 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CIY_06030 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CIY_06020 histidinol-phosphate phosphatase family domain/HAD-superfamily hydrolase, subfamily IIIA K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CIY_06080 ADP-heptose:LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bfi00541]
D CIY_20640 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CIY_28160 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CIY_26160 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CIY_25660 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CIY_28130 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CIY_28190 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CIY_16790 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CIY_26610 Predicted nucleoside-diphosphate sugar epimerases K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CIY_26620 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
C 00550 Peptidoglycan biosynthesis [PATH:bfi00550]
D CIY_06420 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CIY_02690 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CIY_06640 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CIY_04060 UDP-N-acetylmuramoylalanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53]
D CIY_04050 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23]
D CIY_28880 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CIY_04000 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CIY_03990 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CIY_24990 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CIY_14960 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CIY_28830 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CIY_02610 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CIY_19510 Cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CIY_14950 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CIY_18360 Cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D CIY_08360 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CIY_17430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CIY_30320 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:bfi00552]
D CIY_24990 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CIY_31490 Predicted membrane protein involved in D-alanine export K03739 dltB; membrane protein involved in D-alanine export
D CIY_31890 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CIY_26260 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bfi00543]
D CIY_27610 Glycosyltransferase K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-]
D CIY_31500 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CIY_03320 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CIY_28340 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bfi00730]
D CIY_23990 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CIY_24050 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CIY_11330 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CIY_17220 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CIY_17230 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CIY_24690 iron-only hydrogenase maturation protein HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CIY_24000 tyrosine lyase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CIY_16580 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CIY_24060 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CIY_08720 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CIY_08740 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CIY_02890 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:bfi00740]
D CIY_09010 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CIY_08980 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CIY_09020 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CIY_09000 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CIY_17870 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CIY_15980 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CIY_01780 NUDIX domain. K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:bfi00750]
D CIY_33230 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CIY_14740 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bfi00760]
D CIY_04250 Aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CIY_04260 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CIY_04240 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CIY_05830 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CIY_01240 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CIY_22480 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CIY_16520 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CIY_18840 nicotinate (nicotinamide) nucleotide adenylyltransferase/conserved hypothetical protein TIGR00488 K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CIY_04400 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CIY_18520 competence/damage-inducible protein CinA C-terminal domain K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CIY_16600 Predicted sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:bfi00770]
D CIY_01270 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CIY_33240 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CIY_01260 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CIY_16990 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CIY_17000 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CIY_33250 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CIY_23700 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CIY_23690 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CIY_28770 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CIY_06350 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CIY_33500 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CIY_16980 Phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CIY_09380 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CIY_23680 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:bfi00780]
D CIY_07790 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CIY_04030 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CIY_07780 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CIY_07800 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CIY_24700 iron-only hydrogenase maturation protein HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D CIY_33360 biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CIY_28790 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CIY_33270 Biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:bfi00790]
D CIY_23320 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CIY_01280 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CIY_22460 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CIY_09010 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CIY_23340 preQ(0) biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CIY_23330 Organic radical activating enzymes K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CIY_23310 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CIY_23300 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CIY_30260 Molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:bfi00670]
D CIY_01280 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CIY_19760 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CIY_22080 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CIY_09420 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CIY_33860 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CIY_17770 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CIY_08670 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CIY_22400 Methionine synthase I (cobalamin-dependent), methyltransferase domain K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CIY_01290 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CIY_03310 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CIY_18250 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bfi00860]
D CIY_11910 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CIY_11930 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CIY_11940 siroheme synthase, N-terminal domain K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CIY_33430 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CIY_15360 Cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CIY_22700 Precorrin-2 methylase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CIY_15480 precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D CIY_15450 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CIY_15460 Cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D CIY_15490 Precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CIY_15430 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CIY_15420 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CIY_15520 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CIY_07440 ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CIY_15600 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CIY_15540 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CIY_15580 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CIY_15530 NaMN:DMB phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CIY_15590 Fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
D CIY_12800 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bfi00900]
D CIY_16580 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CIY_20780 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CIY_02260 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CIY_25170 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CIY_14420 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CIY_20760 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CIY_18120 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CIY_16570 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:bfi00903]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CIY_00430 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CIY_06850 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CIY_06860 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:bfi00523]
D CIY_25660 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CIY_28130 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CIY_28190 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:bfi01054]
D CIY_31600 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:bfi00946]
D CIY_10090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_10240 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_07250 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_32940 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_32960 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_34510 aryl-beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D CIY_34460 Bacterial alpha-L-rhamnosidase. K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D CIY_19200 Bacterial alpha-L-rhamnosidase. K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D CIY_22560 NADH:flavin oxidoreductases, Old Yellow Enzyme family K26178 fcr; flavanone/flavanol-cleaving reductase
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:bfi00332]
D CIY_18230 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CIY_18280 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:bfi00261]
D CIY_00510 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CIY_16710 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CIY_03570 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CIY_28870 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CIY_07450 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bfi00521]
D CIY_06820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CIY_10220 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_04690 Phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CIY_25660 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CIY_28130 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CIY_28190 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CIY_06820 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:bfi00401]
D CIY_17950 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CIY_29840 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CIY_23080 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CIY_15100 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CIY_15110 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CIY_07770 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CIY_04030 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CIY_07780 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CIY_04640 Acyl carrier protein K02078 acpP; acyl carrier protein
D CIY_07680 acyl carrier protein K02078 acpP; acyl carrier protein
D CIY_25210 Phosphopantetheine attachment site. K02078 acpP; acyl carrier protein
D CIY_20560 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bfi00999]
D CIY_05630 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CIY_11680 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CIY_10090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_10240 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_07250 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_32940 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_32960 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CIY_34510 aryl-beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:bfi00362]
D CIY_16940 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CIY_27770 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CIY_18060 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CIY_18050 Acetyl/propionyl-CoA carboxylase, alpha subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CIY_18040 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CIY_01190 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D CIY_16350 Acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CIY_24590 Hydrogenase maturation factor K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:bfi00625]
D CIY_22910 NAD-dependent aldehyde dehydrogenases K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CIY_11720 Nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CIY_11690 Nitrogenase subunit NifH (ATPase) K02588 nifH; nitrogenase iron protein NifH
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D CIY_16940 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CIY_27770 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D CIY_00430 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D CIY_16940 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CIY_27770 Isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bfi03020]
D CIY_05310 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CIY_05300 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CIY_18490 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CIY_22970 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bfi03010]
D CIY_20870 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D CIY_03040 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D CIY_02820 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D CIY_02930 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D CIY_30130 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D CIY_02960 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CIY_32530 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D CIY_03110 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D CIY_02830 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D CIY_05290 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D CIY_02840 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CIY_02970 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CIY_20470 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D CIY_30110 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D CIY_03060 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D CIY_21560 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D CIY_15930 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D CIY_05340 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1
D CIY_03070 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D CIY_03100 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D CIY_03090 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D CIY_02950 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D CIY_05320 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D CIY_29720 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D CIY_05350 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D CIY_32540 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D CIY_03000 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D CIY_02910 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D CIY_03030 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D CIY_02800 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D CIY_02940 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D CIY_20340 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19
D CIY_20650 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D CIY_18790 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D CIY_03050 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D CIY_03080 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CIY_02990 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D CIY_02360 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D CIY_18810 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D CIY_18370 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D CIY_03020 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D CIY_02920 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D CIY_33050 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D CIY_20590 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CIY_30540 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D CIY_20660 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bfi00970]
D CIY_T_35080 CIY_T_35080 K14218 tRNA-Ala; tRNA Ala
D CIY_T_34970 CIY_T_34970 K14219 tRNA-Arg; tRNA Arg
D CIY_T_34880 CIY_T_34880 K14219 tRNA-Arg; tRNA Arg
D CIY_T_35220 CIY_T_35220 K14219 tRNA-Arg; tRNA Arg
D CIY_T_35040 CIY_T_35040 K14219 tRNA-Arg; tRNA Arg
D CIY_T_34910 CIY_T_34910 K14219 tRNA-Arg; tRNA Arg
D CIY_T_35230 CIY_T_35230 K14219 tRNA-Arg; tRNA Arg
D CIY_T_34810 CIY_T_34810 K14220 tRNA-Asn; tRNA Asn
D CIY_T_35020 CIY_T_35020 K14220 tRNA-Asn; tRNA Asn
D CIY_T_34850 CIY_T_34850 K14221 tRNA-Asp; tRNA Asp
D CIY_T_35120 CIY_T_35120 K14221 tRNA-Asp; tRNA Asp
D CIY_T_35330 CIY_T_35330 K14221 tRNA-Asp; tRNA Asp
D CIY_T_35000 CIY_T_35000 K14222 tRNA-Cys; tRNA Cys
D CIY_T_35380 CIY_T_35380 K14223 tRNA-Gln; tRNA Gln
D CIY_T_34930 CIY_T_34930 K14223 tRNA-Gln; tRNA Gln
D CIY_T_34820 CIY_T_34820 K14224 tRNA-Glu; tRNA Glu
D CIY_T_35090 CIY_T_35090 K14224 tRNA-Glu; tRNA Glu
D CIY_T_35290 CIY_T_35290 K14224 tRNA-Glu; tRNA Glu
D CIY_T_35310 CIY_T_35310 K14224 tRNA-Glu; tRNA Glu
D CIY_T_34900 CIY_T_34900 K14225 tRNA-Gly; tRNA Gly
D CIY_T_35160 CIY_T_35160 K14225 tRNA-Gly; tRNA Gly
D CIY_T_34920 CIY_T_34920 K14226 tRNA-His; tRNA His
D CIY_T_35170 CIY_T_35170 K14226 tRNA-His; tRNA His
D CIY_T_35050 CIY_T_35050 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35060 CIY_T_35060 K14228 tRNA-Leu; tRNA Leu
D CIY_T_34870 CIY_T_34870 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35140 CIY_T_35140 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35320 CIY_T_35320 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35010 CIY_T_35010 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35250 CIY_T_35250 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35070 CIY_T_35070 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35180 CIY_T_35180 K14229 tRNA-Lys; tRNA Lys
D CIY_T_35240 CIY_T_35240 K14229 tRNA-Lys; tRNA Lys
D CIY_T_34940 CIY_T_34940 K14229 tRNA-Lys; tRNA Lys
D CIY_T_34840 CIY_T_34840 K14230 tRNA-Met; tRNA Met
D CIY_T_35200 CIY_T_35200 K14230 tRNA-Met; tRNA Met
D CIY_T_35360 CIY_T_35360 K14230 tRNA-Met; tRNA Met
D CIY_T_35110 CIY_T_35110 K14230 tRNA-Met; tRNA Met
D CIY_T_35280 CIY_T_35280 K14230 tRNA-Met; tRNA Met
D CIY_T_35370 CIY_T_35370 K14231 tRNA-Phe; tRNA Phe
D CIY_T_35210 CIY_T_35210 K14231 tRNA-Phe; tRNA Phe
D CIY_T_34960 CIY_T_34960 K14232 tRNA-Pro; tRNA Pro
D CIY_T_34890 CIY_T_34890 K14232 tRNA-Pro; tRNA Pro
D CIY_T_35150 CIY_T_35150 K14232 tRNA-Pro; tRNA Pro
D CIY_T_34990 CIY_T_34990 K14233 tRNA-Ser; tRNA Ser
D CIY_T_35390 CIY_T_35390 K14233 tRNA-Ser; tRNA Ser
D CIY_T_35400 CIY_T_35400 K14233 tRNA-Ser; tRNA Ser
D CIY_T_34980 CIY_T_34980 K14234 tRNA-Thr; tRNA Thr
D CIY_T_34830 CIY_T_34830 K14234 tRNA-Thr; tRNA Thr
D CIY_T_35030 CIY_T_35030 K14234 tRNA-Thr; tRNA Thr
D CIY_T_35100 CIY_T_35100 K14234 tRNA-Thr; tRNA Thr
D CIY_T_35300 CIY_T_35300 K14234 tRNA-Thr; tRNA Thr
D CIY_T_35260 CIY_T_35260 K14235 tRNA-Trp; tRNA Trp
D CIY_T_35350 CIY_T_35350 K14236 tRNA-Tyr; tRNA Tyr
D CIY_T_35190 CIY_T_35190 K14236 tRNA-Tyr; tRNA Tyr
D CIY_T_35270 CIY_T_35270 K14237 tRNA-Val; tRNA Val
D CIY_T_35130 CIY_T_35130 K14237 tRNA-Val; tRNA Val
D CIY_T_34860 CIY_T_34860 K14237 tRNA-Val; tRNA Val
D CIY_T_35340 CIY_T_35340 K14237 tRNA-Val; tRNA Val
D CIY_21430 glutamyl-tRNA synthetase, bacterial family K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CIY_17170 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CIY_15920 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CIY_10790 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CIY_07910 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CIY_33130 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CIY_21700 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CIY_07420 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CIY_14430 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CIY_30800 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CIY_08670 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CIY_25350 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CIY_17980 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CIY_00350 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CIY_00340 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CIY_28730 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CIY_15300 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CIY_05570 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CIY_09350 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CIY_14860 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CIY_14870 phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CIY_30730 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CIY_21380 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bfi03060]
D CIY_02900 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CIY_05370 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D CIY_17390 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CIY_07410 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CIY_17360 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CIY_30510 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CIY_12970 Preprotein translocase subunit SecA (ATPase, RNA helicase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CIY_29240 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CIY_20480 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CIY_20510 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CIY_20300 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CIY_19390 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bfi04122]
D CIY_11330 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CIY_17220 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CIY_22450 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CIY_17230 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CIY_11880 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D CIY_11900 Predicted metal-dependent protease of the PAD1/JAB1 superfamily K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bfi03018]
D CIY_19860 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CIY_17400 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CIY_33090 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CIY_25040 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CIY_13990 Molecular chaperone K04043 dnaK; molecular chaperone DnaK
D CIY_21500 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CIY_19920 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CIY_20700 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bfi03030]
D CIY_25050 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CIY_20750 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CIY_29430 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CIY_30210 DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CIY_21630 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CIY_30580 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CIY_29710 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CIY_31430 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CIY_30120 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CIY_20290 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CIY_16070 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bfi03410]
D CIY_15890 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CIY_04220 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CIY_21940 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CIY_09700 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CIY_33580 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CIY_16070 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bfi03420]
D CIY_06480 Transcription-repair coupling factor (superfamily II helicase) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CIY_05700 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CIY_05720 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CIY_02730 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CIY_07950 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CIY_21420 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CIY_30030 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CIY_16070 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CIY_22970 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:bfi03430]
D CIY_19590 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CIY_03850 MutS domain V. K07456 mutS2; DNA mismatch repair protein MutS2
D CIY_19580 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CIY_16180 DNA mismatch repair enzyme MutH. K03573 mutH; DNA mismatch repair protein MutH
D CIY_07950 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CIY_21420 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CIY_30030 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CIY_16550 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CIY_16560 Exonuclease VII small subunit. K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CIY_33580 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CIY_30120 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CIY_25050 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CIY_20750 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CIY_30580 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CIY_29430 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CIY_21630 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CIY_30210 DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CIY_16070 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bfi03440]
D CIY_33580 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CIY_30120 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CIY_30620 hypothetical protein K03629 recF; DNA replication and repair protein RecF
D CIY_33160 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CIY_29410 recombination protein RecR K06187 recR; recombination protein RecR
D CIY_15950 protein RecA K03553 recA; recombination protein RecA
D CIY_18300 Holliday junction DNA helicase, RuvA subunit K03550 ruvA; holliday junction DNA helicase RuvA
D CIY_18310 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CIY_13120 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CIY_05650 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CIY_25050 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CIY_20750 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CIY_30580 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CIY_29430 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CIY_21630 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CIY_30210 DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CIY_08650 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bfi02010]
D CIY_11730 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D CIY_11750 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CIY_11780 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CIY_16640 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CIY_16650 ABC-type spermidine/putrescine transport system, permease component II K11070 potC; spermidine/putrescine transport system permease protein
D CIY_16660 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D CIY_29740 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CIY_11150 Maltose-binding periplasmic proteins/domains K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CIY_12170 Maltose-binding periplasmic proteins/domains K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CIY_05790 Maltose-binding periplasmic proteins/domains K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CIY_11160 ABC-type sugar transport systems, permease components K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_12180 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_05780 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_11170 ABC-type maltose transport systems, permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_12190 ABC-type maltose transport systems, permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_05770 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_33800 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CIY_16430 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CIY_33810 ABC-type sugar transport systems, permease components K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D CIY_33820 ABC-type sugar transport system, permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D CIY_29820 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D CIY_29810 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10189 lacF; lactose/L-arabinose transport system permease protein
D CIY_11200 Domain of unknown function (DUF3502). K17318 lplA; putative aldouronate transport system substrate-binding protein
D CIY_10070 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein
D CIY_07330 hypothetical protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D CIY_10170 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D CIY_10050 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D CIY_11210 ABC-type polysaccharide transport system, permease component K17319 lplB; putative aldouronate transport system permease protein
D CIY_10180 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D CIY_11220 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein
D CIY_10190 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein
D CIY_10060 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein
D CIY_05410 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10240 cebE; cellobiose transport system substrate-binding protein
D CIY_12090 hypothetical protein K10240 cebE; cellobiose transport system substrate-binding protein
D CIY_07300 ABC-type sugar transport system, periplasmic component K10240 cebE; cellobiose transport system substrate-binding protein
D CIY_05400 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10241 cebF; cellobiose transport system permease protein
D CIY_12110 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10242 cebG; cellobiose transport system permease protein
D CIY_07320 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10242 cebG; cellobiose transport system permease protein
D CIY_05390 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10242 cebG; cellobiose transport system permease protein
D CIY_12740 ABC-type sugar transport system, periplasmic component K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D CIY_12760 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17235 araP; arabinooligosaccharide transport system permease protein
D CIY_12770 ABC-type sugar transport system, permease component K17236 araQ; arabinooligosaccharide transport system permease protein
D CIY_00250 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10546 chvE; putative multiple sugar transport system substrate-binding protein
D CIY_09100 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10546 chvE; putative multiple sugar transport system substrate-binding protein
D CIY_17050 ABC-type xylose transport system, periplasmic component K10546 chvE; putative multiple sugar transport system substrate-binding protein
D CIY_00220 multiple monosaccharide ABC transporter membrane protein K10547 gguB; putative multiple sugar transport system permease protein
D CIY_09090 ABC-type xylose transport system, permease component K10547 gguB; putative multiple sugar transport system permease protein
D CIY_09070 ABC-type sugar transport system, ATPase component K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CIY_17060 ABC-type sugar transport system, ATPase component K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CIY_25270 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D CIY_25250 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein
D CIY_25240 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D CIY_25260 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CIY_00290 ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein
D CIY_19180 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D CIY_19170 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10440 rbsC; ribose transport system permease protein
D CIY_19190 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10440 rbsC; ribose transport system permease protein
D CIY_19140 ABC-type sugar transport system, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CIY_03210 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CIY_03230 ABC-type sugar transport system, periplasmic component K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CIY_03170 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D CIY_03200 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CIY_00260 xylose-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D CIY_22260 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D CIY_22250 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CIY_03920 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CIY_03910 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D CIY_03900 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein
D CIY_03890 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CIY_03880 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CIY_11530 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D CIY_11520 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CIY_11510 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CIY_30720 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CIY_30700 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CIY_30710 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CIY_08970 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25286 fagD; iron-siderophore transport system substrate-binding protein
D CIY_08920 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CIY_10360 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CIY_23960 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CIY_10410 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D CIY_23940 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D CIY_10400 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CIY_23950 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CIY_11830 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D CIY_33370 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D CIY_32580 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D CIY_26400 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CIY_24270 Predicted permease. K19084 braE; bacitracin transport system permease protein
D CIY_24280 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D CIY_02490 Cell division protein K09811 ftsX; cell division transport system permease protein
D CIY_28540 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D CIY_34650 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CIY_34630 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CIY_06440 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CIY_06780 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CIY_06430 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CIY_08050 ATPase components of ABC transporters with duplicated ATPase domains K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:bfi02060]
D CIY_05850 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CIY_05860 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CIY_28220 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CIY_17240 Phosphotransferase system, HPr-related proteins K02784 ptsH; phosphocarrier protein HPr
D CIY_15670 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CIY_20140 PTS system sucrose-specific IIA component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12) K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CIY_11000 PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6) K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CIY_23020 PTS system trehalose-specific IIB component, Glc family (TC 4.A.1.2.4)/PTS system trehalose-specific IIC component, Glc family (TC 4.A.1.2.4)/PTS system trehalose-specific IIA component, Glc family (TC 4.A.1.2.4) K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CIY_05870 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CIY_05880 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:bfi03070]
D CIY_07410 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CIY_05370 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D CIY_17390 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CIY_02900 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CIY_17360 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CIY_30510 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CIY_12970 Preprotein translocase subunit SecA (ATPase, RNA helicase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CIY_29240 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CIY_20510 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CIY_20480 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bfi02020]
D CIY_26240 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CIY_10440 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_10450 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_12420 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_28400 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_29390 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_20920 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D CIY_14780 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D CIY_17620 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D CIY_30560 ATPase involved in DNA replication initiation K02313 dnaA; chromosomal replication initiator protein
D CIY_24270 Predicted permease. K19084 braE; bacitracin transport system permease protein
D CIY_24280 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D CIY_24300 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CIY_31490 Predicted membrane protein involved in D-alanine export K03739 dltB; membrane protein involved in D-alanine export
D CIY_33080 Malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CIY_28450 carbon storage regulator (csrA) K03563 csrA; carbon storage regulator
D CIY_29350 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CIY_29340 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D CIY_02620 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15190 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15220 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CIY_18140 Methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CIY_02080 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_11240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_11490 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_04170 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_04850 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_05730 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_05810 Cache domain./HAMP domain. K03406 mcp; methyl-accepting chemotaxis protein
D CIY_06390 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_07520 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_07660 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_14330 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_15990 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_15810 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_22520 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_22540 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_29890 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_32370 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_32380 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_33710 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_16000 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D CIY_20960 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D CIY_20970 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CIY_14760 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CIY_21110 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CIY_20980 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CIY_20990 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CIY_17660 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CIY_03240 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CIY_07350 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CIY_00270 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CIY_02170 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CIY_10150 hypothetical protein K07720 yesN; two-component system, response regulator YesN
D CIY_03250 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CIY_17090 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CIY_22280 Protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CIY_23350 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_16470 Glycosyl hydrolase family 9. K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_33540 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_10500 Glycosyl hydrolase family 9./N-terminal ig-like domain of cellulase. K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_21980 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_21950 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CIY_28530 Anti-sigma-28 factor, FlgM. K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bfi02024]
D CIY_04730 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CIY_15100 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CIY_15110 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CIY_16010 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CIY_03920 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CIY_03910 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D CIY_03900 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein
D CIY_03890 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CIY_03880 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CIY_04650 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CIY_08980 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CIY_30720 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CIY_30700 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CIY_30710 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CIY_07080 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CIY_20440 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CIY_20430 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CIY_07070 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CIY_20400 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CIY_20390 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CIY_20380 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CIY_30510 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CIY_07410 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CIY_05370 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D CIY_17390 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CIY_02900 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CIY_17360 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CIY_12970 Preprotein translocase subunit SecA (ATPase, RNA helicase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CIY_29240 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CIY_20510 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CIY_20480 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bfi02030]
D CIY_02080 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_11240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_11490 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_04170 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_04850 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_05730 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_05810 Cache domain./HAMP domain. K03406 mcp; methyl-accepting chemotaxis protein
D CIY_06390 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_07520 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_07660 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_14330 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_15990 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_15810 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_22520 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_22540 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_29890 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_32370 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_32380 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_33710 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_00290 ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein
D CIY_19180 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D CIY_20970 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CIY_16000 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D CIY_20960 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D CIY_14760 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CIY_21110 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CIY_20950 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D CIY_20980 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CIY_20990 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CIY_17660 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CIY_20940 Chemotaxis protein; stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CIY_18140 Methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CIY_21280 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CIY_21130 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D CIY_21120 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CIY_30360 Chemotaxis protein CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D CIY_21160 Flagellar motor protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bfi02040]
D CIY_21300 Flagellar hook-basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE
D CIY_21290 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF
D CIY_21280 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CIY_21270 Flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH
D CIY_21130 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D CIY_21120 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CIY_30360 Chemotaxis protein CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D CIY_21100 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D CIY_21090 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CIY_21080 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CIY_21070 Flagellar biosynthesis pathway, component FliR K02421 fliR; flagellar biosynthesis protein FliR
D CIY_21040 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CIY_21050 Flagellar biosynthesis pathway, component FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CIY_21320 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CIY_21310 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CIY_21200 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CIY_21180 fagellar hook-basal body proteins K02390 flgE; flagellar hook protein FlgE
D CIY_05680 fagellar hook-basal body proteins K02391 flgF; flagellar basal-body rod protein FlgF
D CIY_05670 fagellar hook-basal body proteins K02392 flgG; flagellar basal-body rod protein FlgG
D CIY_05660 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D CIY_28490 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CIY_28500 Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D CIY_28470 Flagellin and related hook-associated proteins K02397 flgL; flagellar hook-associated protein 3 FlgL
D CIY_10440 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_10450 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_12420 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_28400 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_29390 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_28350 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D CIY_28430 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D CIY_28420 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CIY_29380 Flagellar protein FliS. K02422 fliS; flagellar secretion chaperone FliS
D CIY_21160 Flagellar motor protein K02557 motB; chemotaxis protein MotB
D CIY_28530 Anti-sigma-28 factor, FlgM. K02398 flgM; negative regulator of flagellin synthesis FlgM
D CIY_31420 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CIY_20920 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CIY_22400 Methionine synthase I (cobalamin-dependent), methyltransferase domain K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bfi01501]
D CIY_19220 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CIY_30720 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CIY_30700 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CIY_30710 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CIY_02610 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CIY_19510 Cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bfi01502]
D CIY_04000 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CIY_22240 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CIY_03990 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CIY_14960 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CIY_28830 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bfi01503]
D CIY_03710 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CIY_24490 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CIY_33390 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CIY_26240 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CIY_31490 Predicted membrane protein involved in D-alanine export K03739 dltB; membrane protein involved in D-alanine export
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bfi01000]
C 01001 Protein kinases [BR:bfi01001]
D CIY_08710 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CIY_34370 Protein kinase domain. K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CIY_10430 HipA-like C-terminal domain./HipA-like N-terminal domain. K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CIY_28660 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CIY_29010 HipA-like C-terminal domain. K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CIY_12650 Putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CIY_20970 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CIY_03240 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CIY_07350 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bfi01009]
D CIY_25040 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CIY_31230 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CIY_08700 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CIY_00990 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:bfi01002]
D CIY_19390 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CIY_09550 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CIY_23190 Predicted glutamine amidotransferases K07010 K07010; putative glutamine amidotransferase
D CIY_02530 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CIY_03960 Uncharacterized protein conserved in bacteria K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CIY_17880 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CIY_14600 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CIY_15160 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CIY_26250 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CIY_15180 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CIY_04760 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CIY_09440 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CIY_12630 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CIY_32840 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CIY_06720 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D CIY_31630 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D CIY_32690 signal peptidase I, archaeal type/sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D CIY_00320 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D CIY_07880 oligopeptidase F. Metallo peptidase. MEROPS family M03B K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CIY_33400 Predicted carboxypeptidase K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D CIY_10580 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CIY_29450 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CIY_02880 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CIY_03940 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CIY_33530 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CIY_33890 Leucyl aminopeptidase (aminopeptidase T) K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CIY_05470 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CIY_24940 Cellulase M and related proteins K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D CIY_26240 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CIY_15260 Bacterial Ig-like domain (group 2)./Subtilase family. K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D CIY_08360 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CIY_17430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CIY_30320 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CIY_10330 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CIY_18860 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CIY_20300 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CIY_02480 C-terminal peptidase (prc) K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CIY_09960 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CIY_33420 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CIY_17320 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CIY_18330 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CIY_04560 Predicted Zn-dependent proteases and their inactivated homologs K03592 pmbA; PmbA protein
D CIY_04550 Predicted Zn-dependent proteases and their inactivated homologs K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:bfi01003]
D CIY_19790 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D CIY_02610 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CIY_27610 Glycosyltransferase K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-]
D CIY_31860 Glycosyltransferases involved in cell wall biogenesis K19423 epsE; glycosyltransferase EpsE [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bfi01005]
D CIY_03550 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CIY_06080 ADP-heptose:LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D CIY_06030 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CIY_06020 histidinol-phosphate phosphatase family domain/HAD-superfamily hydrolase, subfamily IIIA K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CIY_26660 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CIY_27850 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CIY_26700 Glycosyltransferases involved in cell wall biogenesis K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bfi01011]
D CIY_06420 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CIY_02690 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CIY_06640 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CIY_28880 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CIY_04000 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CIY_22240 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CIY_09960 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CIY_33420 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CIY_14960 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CIY_28830 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CIY_24990 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CIY_27730 Uncharacterized membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D CIY_02610 Membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CIY_19510 Cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CIY_14950 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CIY_18360 Cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D CIY_08360 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CIY_17430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CIY_30320 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CIY_02530 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CIY_03960 Uncharacterized protein conserved in bacteria K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CIY_17880 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CIY_09440 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CIY_12630 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CIY_32840 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CIY_06720 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D CIY_31630 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D CIY_32690 signal peptidase I, archaeal type/sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D CIY_03710 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CIY_24490 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CIY_33390 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:bfi01004]
D CIY_07770 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CIY_07790 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CIY_04030 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CIY_07780 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CIY_07800 beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CIY_07760 Dioxygenases related to 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CIY_08750 Lysophospholipase L1 and related esterases K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CIY_04650 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CIY_20570 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CIY_20220 conserved hypothetical integral membrane protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CIY_03980 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CIY_18890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:bfi01008]
D CIY_31600 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:bfi01006]
D CIY_16570 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CIY_19570 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CIY_12800 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:bfi01007]
D CIY_17170 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CIY_21430 glutamyl-tRNA synthetase, bacterial family K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CIY_30730 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CIY_21380 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CIY_14430 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CIY_15300 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CIY_30800 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CIY_00350 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CIY_00340 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CIY_25350 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CIY_17980 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CIY_28730 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CIY_10790 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CIY_07910 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CIY_09350 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CIY_33130 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CIY_07420 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CIY_05570 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CIY_21700 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CIY_15920 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CIY_14860 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CIY_14870 phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CIY_29840 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CIY_02000 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CIY_32620 Aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CIY_23080 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CIY_24120 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CIY_21840 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CIY_09380 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CIY_33230 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bfi00194]
D CIY_08470 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CIY_29520 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CIY_08460 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CIY_29530 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CIY_08450 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CIY_29540 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CIY_29550 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CIY_29560 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CIY_08420 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CIY_29580 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bfi03000]
D CIY_16170 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CIY_19130 AraC-like ligand binding domain. K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D CIY_05890 Transcriptional regulators of sugar metabolism K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CIY_33670 Transcriptional regulators of sugar metabolism K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CIY_11180 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CIY_05420 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CIY_07180 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CIY_12150 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CIY_23590 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CIY_23660 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CIY_08290 transcriptional regulator, GntR family K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D CIY_03220 Transcriptional regulators K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D CIY_23030 transcriptional regulator, GntR family K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D CIY_10820 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CIY_28560 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
D CIY_12460 MarR family. K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CIY_22900 Predicted transcriptional regulators K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CIY_10780 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CIY_11420 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D CIY_32430 Predicted transcriptional regulators K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CIY_08780 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CIY_03820 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CIY_28790 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CIY_33270 Biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CIY_14160 Predicted transcriptional regulators K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D CIY_02520 transcriptional regulator, CdaR family K02647 cdaR; carbohydrate diacid regulator
D CIY_21330 GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CIY_14230 hypothetical protein K07726 K07726; putative transcriptional regulator
D CIY_21920 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D CIY_15690 Transcriptional antiterminator K03480 glcT; transcriptional antiterminator
D CIY_11640 Uncharacterized protein conserved in bacteria K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CIY_30400 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CIY_31390 CarD-like/TRCF domain. K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CIY_02420 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) K02443 glpP; glycerol uptake operon antiterminator
D CIY_16610 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism
D CIY_21520 Transcriptional regulator of heat shock gene K03705 hrcA; heat-inducible transcriptional repressor
D CIY_21530 Transcriptional regulator of heat shock gene K03705 hrcA; heat-inducible transcriptional repressor
D CIY_22160 Putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D CIY_10270 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D CIY_14900 mraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:bfi03021]
D CIY_22970 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CIY_05310 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CIY_05300 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CIY_18490 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CIY_31420 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CIY_29140 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CIY_14460 RNA polymerase sigma factor, sigma-70 family K27000 sigH; RNA polymerase sigma-H factor
D CIY_20920 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D CIY_17790 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CIY_16540 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CIY_05360 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D CIY_22420 Stage II sporulation protein E (SpoIIE). K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D CIY_25110 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K04749 rsbV; anti-sigma B factor antagonist
D CIY_22440 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D CIY_28750 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CIY_29470 Transcription elongation factor K03624 greA; transcription elongation factor GreA
D CIY_33090 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bfi03019]
D CIY_18760 Ribonuclease E/G family. K08301 rng; ribonuclease G [EC:3.1.26.-]
D CIY_17400 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CIY_03770 uncharacterized domain HDIG K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CIY_19860 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CIY_33090 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CIY_25040 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CIY_13990 Molecular chaperone K04043 dnaK; molecular chaperone DnaK
D CIY_21500 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CIY_19920 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CIY_20700 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CIY_28450 carbon storage regulator (csrA) K03563 csrA; carbon storage regulator
D CIY_02680 Predicted P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:bfi03011]
D CIY_20870 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D CIY_03040 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D CIY_02820 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D CIY_02930 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D CIY_30130 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D CIY_02960 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CIY_32530 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D CIY_03110 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D CIY_02830 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D CIY_05290 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D CIY_02840 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CIY_02970 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CIY_20470 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D CIY_30110 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D CIY_03060 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D CIY_21560 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D CIY_15930 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D CIY_05340 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1
D CIY_03070 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D CIY_03100 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D CIY_03090 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D CIY_02950 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D CIY_29720 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D CIY_05350 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D CIY_05320 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D CIY_32540 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D CIY_03000 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D CIY_02910 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D CIY_03030 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D CIY_02800 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D CIY_02940 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D CIY_20340 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19
D CIY_20650 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D CIY_18790 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D CIY_03050 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D CIY_03080 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CIY_02990 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D CIY_18810 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D CIY_18370 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D CIY_03020 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D CIY_02920 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D CIY_33050 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D CIY_20590 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CIY_30540 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D CIY_20660 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D CIY_02360 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:bfi03009]
D CIY_33170 GTP-binding protein Era K03595 era; GTPase
D CIY_18820 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D CIY_17790 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CIY_16540 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CIY_05360 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D CIY_03930 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CIY_30820 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CIY_08680 ribosomal RNA small subunit methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CIY_17200 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CIY_30440 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CIY_14910 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CIY_22370 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CIY_30160 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CIY_16590 hemolysin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CIY_14450 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CIY_19740 conserved hypothetical protein TIGR00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CIY_12220 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CIY_03120 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CIY_08690 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CIY_03760 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CIY_07960 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CIY_18600 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CIY_05440 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CIY_05600 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CIY_19380 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CIY_02300 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CIY_18500 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CIY_17190 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CIY_18760 Ribonuclease E/G family. K08301 rng; ribonuclease G [EC:3.1.26.-]
D CIY_17280 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CIY_14440 Uncharacterized protein conserved in bacteria K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CIY_08720 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CIY_20230 ribosome-associated GTPase EngA K03977 engA; GTPase
D CIY_20320 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D CIY_25080 GTP-binding protein HflX K03665 hflX; GTPase
D CIY_29640 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CIY_09310 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CIY_17830 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CIY_17780 Uncharacterized protein conserved in bacteria K09748 rimP; ribosome maturation factor RimP
D CIY_30600 Uncharacterized conserved protein K14761 rlbA; ribosome-associated protein
D CIY_18850 iojap-related protein K09710 ybeB; ribosome-associated protein
D CIY_19680 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D CIY_18830 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein K07574 yhbY; RNA-binding protein
D CIY_04020 Sigma 54 modulation protein / S30EA ribosomal protein. K05808 hpf; ribosome hibernation promoting factor
D CIY_10550 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CIY_20600 Predicted metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:bfi03016]
D CIY_02290 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CIY_05560 uncharacterized domain HDIG K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CIY_05570 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CIY_00350 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CIY_00340 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CIY_17980 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CIY_30800 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CIY_17170 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CIY_15300 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CIY_28730 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CIY_10790 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CIY_15920 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CIY_07910 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CIY_33130 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CIY_21700 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CIY_07420 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CIY_14430 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CIY_25350 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CIY_09350 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CIY_14860 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CIY_14870 phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CIY_30730 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CIY_21380 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CIY_31530 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CIY_28840 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CIY_30330 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CIY_10470 conserved hypothetical protein TIGR00104 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D CIY_32570 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CIY_11330 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CIY_17220 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CIY_29640 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CIY_19570 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CIY_30470 small GTP-binding protein domain K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CIY_30450 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CIY_35420 Bacterial RNase P class A K01978 rnpB; M1 RNA
D CIY_21430 glutamyl-tRNA synthetase, bacterial family K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CIY_05050 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CIY_01790 Uncharacterized conserved protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CIY_30940 Cytosine/adenosine deaminases K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CIY_28760 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CIY_18290 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CIY_17260 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CIY_20350 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CIY_31410 Predicted SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D CIY_32610 Predicted rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CIY_22450 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CIY_14850 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CIY_23310 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CIY_23340 preQ(0) biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CIY_23330 Organic radical activating enzymes K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CIY_23300 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CIY_17230 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CIY_05500 tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CIY_02310 Inactive homolog of metal-dependent proteases, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CIY_02270 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CIY_02320 conserved hypothetical nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CIY_11380 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CIY_20630 Predicted nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D CIY_17400 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CIY_19860 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bfi03012]
D CIY_17820 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D CIY_20670 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D CIY_19850 ATPase components of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CIY_20860 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D CIY_05260 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CIY_17960 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D CIY_20820 ribosome recycling factor K02838 frr; ribosome recycling factor
D CIY_33020 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CIY_06600 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CIY_02860 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CIY_07560 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D CIY_02470 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D CIY_15940 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:bfi03110]
D CIY_23750 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CIY_31090 C-terminal, D2-small domain, of ClpB protein./AAA domain (Cdc48 subfamily). K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CIY_01920 ATP-dependent protease Clp, ATPase subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CIY_01930 ATP-dependent protease Clp, ATPase subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CIY_10340 endopeptidase Clp ATP-binding regulatory subunit (clpX) K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CIY_31230 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CIY_13990 Molecular chaperone K04043 dnaK; molecular chaperone DnaK
D CIY_21500 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CIY_19920 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CIY_10740 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D CIY_08510 Disulfide bond chaperones of the HSP33 family K04083 hslO; molecular chaperone Hsp33
D CIY_21510 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D CIY_23910 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D CIY_19930 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D CIY_26240 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D CIY_05470 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CIY_10700 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CIY_09450 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CIY_07160 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CIY_15260 Bacterial Ig-like domain (group 2)./Subtilase family. K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D CIY_01100 Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CIY_06460 hypothetical protein K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D CIY_31260 PPIC-type PPIASE domain. K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D CIY_11870 Thioredoxin domain-containing protein K03671 TXN; thioredoxin
D CIY_12450 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:bfi04131]
D CIY_03460 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D CIY_14530 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CIY_09180 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CIY_31230 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:bfi03051]
D CIY_31230 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:bfi03032]
D CIY_16170 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CIY_05530 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CIY_30560 ATPase involved in DNA replication initiation K02313 dnaA; chromosomal replication initiator protein
D CIY_29710 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CIY_06660 DNA replication protein K02315 dnaC; DNA replication protein DnaC
D CIY_31430 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CIY_30120 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CIY_25050 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CIY_20750 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CIY_30580 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CIY_21630 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CIY_30210 DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CIY_29430 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CIY_20290 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CIY_16070 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CIY_20000 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CIY_30650 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CIY_20010 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CIY_21340 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bfi03036]
D CIY_16170 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CIY_03460 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D CIY_05530 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CIY_30560 ATPase involved in DNA replication initiation K02313 dnaA; chromosomal replication initiator protein
D CIY_18000 Uncharacterized conserved protein K05896 scpA; segregation and condensation protein A
D CIY_00910 DNA segregation ATPase FtsK/SpoIIIE and related proteins K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CIY_19770 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CIY_34250 DNA segregation ATPase FtsK/SpoIIIE and related proteins K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CIY_14930 hypothetical protein K03586 ftsL; cell division protein FtsL
D CIY_14980 Bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW
D CIY_02490 Cell division protein K09811 ftsX; cell division transport system permease protein
D CIY_18320 cell division protein ZapA K09888 zapA; cell division protein ZapA
D CIY_03710 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CIY_24490 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CIY_33390 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CIY_19410 Uncharacterized protein conserved in bacteria K09772 sepF; cell division inhibitor SepF
D CIY_05690 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CIY_19550 Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D CIY_19540 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CIY_19530 rod shape-determining protein MreD. K03571 mreD; rod shape-determining protein MreD
D CIY_19490 Bacterial cell division membrane protein K05837 rodA; rod shape determining protein RodA
D CIY_30420 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D CIY_30400 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CIY_30450 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CIY_30440 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CIY_06770 Protein involved in cell division K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CIY_22740 Protein involved in cell division K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CIY_03420 Uncharacterized conserved protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CIY_10350 ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:bfi03400]
D CIY_04220 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CIY_15890 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CIY_22970 Rad3-related DNA helicases K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CIY_16340 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CIY_21720 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CIY_09930 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CIY_06970 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CIY_20020 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CIY_21940 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CIY_09700 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CIY_33580 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CIY_16070 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CIY_05700 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CIY_05720 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CIY_02730 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CIY_07950 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CIY_21420 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CIY_30030 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CIY_05310 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CIY_05300 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CIY_18490 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CIY_06480 Transcription-repair coupling factor (superfamily II helicase) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CIY_19590 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CIY_03850 MutS domain V. K07456 mutS2; DNA mismatch repair protein MutS2
D CIY_19580 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CIY_16180 DNA mismatch repair enzyme MutH. K03573 mutH; DNA mismatch repair protein MutH
D CIY_16550 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CIY_16560 Exonuclease VII small subunit. K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CIY_25050 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CIY_20750 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CIY_30580 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CIY_21630 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CIY_30210 DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CIY_29430 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CIY_30120 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CIY_05650 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CIY_15950 protein RecA K03553 recA; recombination protein RecA
D CIY_18300 Holliday junction DNA helicase, RuvA subunit K03550 ruvA; holliday junction DNA helicase RuvA
D CIY_18310 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CIY_08650 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CIY_04160 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D CIY_32460 KaiC. K04485 radA; DNA repair protein RadA/Sms
D CIY_30620 hypothetical protein K03629 recF; DNA replication and repair protein RecF
D CIY_13120 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CIY_33160 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CIY_29410 recombination protein RecR K06187 recR; recombination protein RecR
D CIY_16620 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CIY_18610 Penicillin-binding protein-related factor A, putative recombinase K03700 recU; recombination protein U
D CIY_31340 Exodeoxyribonuclease V, gamma subunit. K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CIY_31320 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CIY_03630 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D CIY_31930 Predicted ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D CIY_20000 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CIY_30650 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CIY_20010 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CIY_21340 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CIY_05530 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CIY_18920 Nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V
D CIY_33940 hypothetical protein K03502 umuC; DNA polymerase V
D CIY_18860 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CIY_15960 Uncharacterized protein conserved in bacteria K03565 recX; regulatory protein
D CIY_17840 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:bfi03029]
D CIY_17820 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D CIY_20670 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D CIY_20860 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D CIY_05260 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CIY_17960 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D CIY_33170 GTP-binding protein Era K03595 era; GTPase
D CIY_30730 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CIY_17980 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CIY_10790 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CIY_33130 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CIY_15300 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CIY_30120 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CIY_13990 Molecular chaperone K04043 dnaK; molecular chaperone DnaK
D CIY_21500 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CIY_21510 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D CIY_19920 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CIY_19930 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D CIY_10740 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D CIY_11330 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CIY_17220 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CIY_30510 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CIY_31230 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bfi02000]
D CIY_34650 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CIY_34630 ABC-type multidrug transport system, ATPase and permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CIY_06440 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CIY_06780 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CIY_06430 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CIY_28620 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CIY_04100 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CIY_08050 ATPase components of ABC transporters with duplicated ATPase domains K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D CIY_11730 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D CIY_11750 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CIY_11780 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CIY_16640 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CIY_16650 ABC-type spermidine/putrescine transport system, permease component II K11070 potC; spermidine/putrescine transport system permease protein
D CIY_16660 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D CIY_24950 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CIY_24960 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CIY_29740 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CIY_07190 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K25086 musE; maltose transport system substrate-binding protein
D CIY_12120 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K25086 musE; maltose transport system substrate-binding protein
D CIY_11990 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K25086 musE; maltose transport system substrate-binding protein
D CIY_07200 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K25087 musF; maltose transport system permease protein
D CIY_12000 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K25087 musF; maltose transport system permease protein
D CIY_12010 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K25088 musG; maltose transport system permease protein
D CIY_07210 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K25088 musG; maltose transport system permease protein
D CIY_11150 Maltose-binding periplasmic proteins/domains K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CIY_12170 Maltose-binding periplasmic proteins/domains K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CIY_05790 Maltose-binding periplasmic proteins/domains K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CIY_11160 ABC-type sugar transport systems, permease components K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_12180 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_05780 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_11170 ABC-type maltose transport systems, permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_12190 ABC-type maltose transport systems, permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_05770 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D CIY_33800 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CIY_16430 ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CIY_33810 ABC-type sugar transport systems, permease components K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D CIY_33820 ABC-type sugar transport system, permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D CIY_05410 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10240 cebE; cellobiose transport system substrate-binding protein
D CIY_12090 hypothetical protein K10240 cebE; cellobiose transport system substrate-binding protein
D CIY_07300 ABC-type sugar transport system, periplasmic component K10240 cebE; cellobiose transport system substrate-binding protein
D CIY_05400 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10241 cebF; cellobiose transport system permease protein
D CIY_12110 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10242 cebG; cellobiose transport system permease protein
D CIY_07320 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10242 cebG; cellobiose transport system permease protein
D CIY_05390 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10242 cebG; cellobiose transport system permease protein
D CIY_29820 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D CIY_29810 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10189 lacF; lactose/L-arabinose transport system permease protein
D CIY_11200 Domain of unknown function (DUF3502). K17318 lplA; putative aldouronate transport system substrate-binding protein
D CIY_10070 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein
D CIY_07330 hypothetical protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D CIY_10170 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D CIY_10050 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D CIY_11210 ABC-type polysaccharide transport system, permease component K17319 lplB; putative aldouronate transport system permease protein
D CIY_10180 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D CIY_11220 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein
D CIY_10190 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein
D CIY_10060 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein
D CIY_00260 xylose-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D CIY_02160 ABC-type sugar transport system, periplasmic component K25067 fcsSBP; fucose transport system substrate-binding protein
D CIY_02120 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K25069 K25069; fucose transport system permease protein
D CIY_00250 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10546 chvE; putative multiple sugar transport system substrate-binding protein
D CIY_09100 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10546 chvE; putative multiple sugar transport system substrate-binding protein
D CIY_17050 ABC-type xylose transport system, periplasmic component K10546 chvE; putative multiple sugar transport system substrate-binding protein
D CIY_00220 multiple monosaccharide ABC transporter membrane protein K10547 gguB; putative multiple sugar transport system permease protein
D CIY_09090 ABC-type xylose transport system, permease component K10547 gguB; putative multiple sugar transport system permease protein
D CIY_09070 ABC-type sugar transport system, ATPase component K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CIY_17060 ABC-type sugar transport system, ATPase component K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CIY_00290 ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein
D CIY_19180 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D CIY_19170 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10440 rbsC; ribose transport system permease protein
D CIY_19190 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10440 rbsC; ribose transport system permease protein
D CIY_19140 ABC-type sugar transport system, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CIY_03210 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CIY_03230 ABC-type sugar transport system, periplasmic component K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CIY_03170 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D CIY_03200 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CIY_23560 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K25670 fusA; fructooligosaccharide transport system substrate-binding protein
D CIY_23570 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K25672 fusB; fructooligosaccharide transport system permease protein
D CIY_12740 ABC-type sugar transport system, periplasmic component K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D CIY_12760 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17235 araP; arabinooligosaccharide transport system permease protein
D CIY_12770 ABC-type sugar transport system, permease component K17236 araQ; arabinooligosaccharide transport system permease protein
D CIY_25270 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D CIY_25250 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein
D CIY_25240 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D CIY_25260 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CIY_08200 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CIY_22260 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D CIY_22250 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CIY_03920 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CIY_03910 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D CIY_03900 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein
D CIY_03890 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CIY_03880 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CIY_11530 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D CIY_11520 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CIY_11510 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CIY_00550 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CIY_02770 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CIY_00540 ABC-type uncharacterized transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CIY_02760 ABC-type uncharacterized transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CIY_00520 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CIY_02750 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CIY_10830 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CIY_11440 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CIY_21670 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CIY_10840 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) K02029 ABC.PA.P; polar amino acid transport system permease protein
D CIY_11460 ABC-type amino acid transport system, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D CIY_11470 amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-) K02029 ABC.PA.P; polar amino acid transport system permease protein
D CIY_11450 hypothetical protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CIY_21660 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein
D CIY_10850 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CIY_11480 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CIY_23120 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CIY_30720 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CIY_30700 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D CIY_30710 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D CIY_07080 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CIY_20440 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CIY_20430 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CIY_07070 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CIY_20400 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CIY_20390 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CIY_20380 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CIY_08970 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25286 fagD; iron-siderophore transport system substrate-binding protein
D CIY_08920 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CIY_08950 ABC-type enterobactin transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D CIY_10360 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CIY_23960 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CIY_10410 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D CIY_23940 ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein
D CIY_10400 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CIY_23950 ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CIY_11830 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D CIY_33370 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D CIY_32580 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D CIY_32600 cobalt transport protein ATP-binding subunit K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CIY_26400 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D CIY_04950 ABC-2 type transporter. K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CIY_04960 hypothetical protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CIY_04970 ABC-type multidrug transport system, ATPase component K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CIY_24270 Predicted permease. K19084 braE; bacitracin transport system permease protein
D CIY_24280 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D CIY_08100 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D CIY_08090 ABC-type multidrug transport system, ATPase component K25148 berA; beta-exotoxin I transport system ATP-binding protein
D CIY_28540 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D CIY_21990 ABC-type antimicrobial peptide transport system, permease component K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D CIY_22020 ABC-type antimicrobial peptide transport system, ATPase component K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D CIY_02490 Cell division protein K09811 ftsX; cell division transport system permease protein
D CIY_01470 ABC-type uncharacterized transport system, permease component K25155 evrB; viologen exporter family transport system permease protein
D CIY_26530 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CIY_26540 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CIY_04520 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CIY_33770 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CIY_28930 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CIY_26550 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CIY_11090 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CIY_11100 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CIY_33730 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CIY_14710 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CIY_33740 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CIY_04880 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CIY_01860 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump
D CIY_03140 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CIY_15120 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CIY_10920 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CIY_01150 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CIY_28740 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CIY_25010 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CIY_02780 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CIY_22550 Nitrate/nitrite transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CIY_05850 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CIY_05860 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CIY_28220 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D CIY_17240 Phosphotransferase system, HPr-related proteins K02784 ptsH; phosphocarrier protein HPr
D CIY_15670 PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CIY_20140 PTS system sucrose-specific IIA component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12) K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CIY_11000 PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6) K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CIY_23020 PTS system trehalose-specific IIB component, Glc family (TC 4.A.1.2.4)/PTS system trehalose-specific IIC component, Glc family (TC 4.A.1.2.4)/PTS system trehalose-specific IIA component, Glc family (TC 4.A.1.2.4) K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CIY_05870 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CIY_02400 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) K02440 glpF; glycerol uptake facilitator
D CIY_03720 Ion channel. K10716 kch; voltage-gated potassium channel
D CIY_15010 Ion channel. K10716 kch; voltage-gated potassium channel
D CIY_15210 ammonium transporter K03320 amt; ammonium transporter, Amt family
D CIY_01990 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D CIY_14390 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter
D CIY_21160 Flagellar motor protein K02557 motB; chemotaxis protein MotB
D CIY_01080 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CIY_12610 Gram positive anchor. K21449 ata; trimeric autotransporter adhesin
D CIY_34720 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CIY_22670 Putative effector of murein hydrolase LrgA K06518 cidA; holin-like protein
D CIY_01960 Major Facilitator Superfamily. K16211 malY; maltose/moltooligosaccharide transporter
D CIY_11630 Predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family
D CIY_26590 EamA-like transporter family. K03297 emrE; small multidrug resistance pump
D CIY_19090 Predicted membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D CIY_33630 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CIY_30770 Ca2+/Na+ antiporter K07301 yrbG; cation:H+ antiporter
D CIY_10800 SSS sodium solute transporter superfamily K11928 putP; sodium/proline symporter
D CIY_03560 transporter, NhaC family (TC 2.A.35) K18218 tet35; tetracycline resistance efflux pump
D CIY_09510 Trk-type K+ transport systems, membrane components K03498 trkH; trk/ktr system potassium uptake protein
D CIY_09530 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D CIY_03530 uracil-xanthine permease K02824 uraA; uracil permease
D CIY_31170 Permeases K06901 pbuG; adenine/guanine/hypoxanthine permease
D CIY_15820 Chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D CIY_19000 Chromate transport protein ChrA K07240 chrA; chromate transporter
D CIY_06490 Sulfate permease and related transporters (MFS superfamily) K03321 TC.SULP; sulfate permease, SulP family
D CIY_25070 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D CIY_27730 Uncharacterized membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D CIY_23050 Predicted permeases K24180 mleP; malate permease and related proteins
D CIY_17030 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D CIY_17040 Branched-chain amino acid transport protein (AzlD). K26606 azlD; branched chain amino acid efflux pump
D CIY_07830 Predicted membrane protein K23675 fmnP; riboflavin transporter
D CIY_22470 Protein of unknown function (DUF1393). K23675 fmnP; riboflavin transporter
D CIY_25090 probable proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D CIY_14980 Bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW
D CIY_12910 Predicted membrane protein K23242 mntP; manganese efflux pump family protein
D CIY_30760 Predicted membrane protein K23242 mntP; manganese efflux pump family protein
D CIY_18060 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CIY_18070 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CIY_18030 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D CIY_18050 Acetyl/propionyl-CoA carboxylase, alpha subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D CIY_18040 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D CIY_10710 Cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D CIY_11980 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D CIY_10960 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D CIY_31940 Uncharacterized membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:bfi02044]
D CIY_06560 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D CIY_06500 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D CIY_29350 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CIY_29340 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D CIY_21830 competence protein ComEA helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA
D CIY_29620 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CIY_21780 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D CIY_23790 hypothetical protein K02246 comGD; competence protein ComGD
D CIY_21040 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CIY_21050 Flagellar biosynthesis pathway, component FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CIY_20270 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein
D CIY_21290 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF
D CIY_21270 Flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH
D CIY_21120 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CIY_30360 Chemotaxis protein CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D CIY_21100 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D CIY_21090 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CIY_21080 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CIY_21070 Flagellar biosynthesis pathway, component FliR K02421 fliR; flagellar biosynthesis protein FliR
D CIY_12970 Preprotein translocase subunit SecA (ATPase, RNA helicase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CIY_29240 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CIY_07410 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D CIY_05370 preprotein translocase, SecE subunit, bacterial K03073 secE; preprotein translocase subunit SecE
D CIY_17390 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CIY_02900 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D CIY_20480 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CIY_20510 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CIY_17360 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D CIY_30510 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CIY_12940 Domain of unknown function (DUF1975). K12268 asp1; accessory secretory protein Asp1
D CIY_12950 hypothetical protein K12270 asp3; accessory secretory protein Asp3
C 02042 Bacterial toxins [BR:bfi02042]
D CIY_01080 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:bfi02022]
D CIY_14780 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D CIY_17620 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D CIY_24300 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CIY_11040 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D CIY_12650 Putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CIY_12580 Response regulator containing CheY-like receiver and SARP domains K02477 K02477; two-component system, LytTR family, response regulator
D CIY_25130 Response regulator receiver domain. K02477 K02477; two-component system, LytTR family, response regulator
D CIY_20970 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CIY_14760 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CIY_21110 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CIY_20980 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CIY_20990 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CIY_17660 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CIY_03240 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CIY_07350 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D CIY_00270 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CIY_02170 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CIY_10150 hypothetical protein K07720 yesN; two-component system, response regulator YesN
D CIY_03250 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CIY_17090 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D CIY_15230 Response regulator with putative antiterminator output domain K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:bfi02035]
D CIY_20970 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CIY_16000 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D CIY_20960 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D CIY_20950 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D CIY_20940 Chemotaxis protein; stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CIY_18140 Methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CIY_20980 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CIY_20990 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CIY_14760 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CIY_21110 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CIY_17660 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CIY_02080 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_11240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_11490 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_04170 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_04850 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_05730 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_05810 Cache domain./HAMP domain. K03406 mcp; methyl-accepting chemotaxis protein
D CIY_06390 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_07520 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_07660 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_14330 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_15990 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_15810 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_22520 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_22540 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_29890 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_32370 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_32380 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_33710 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CIY_21270 Flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH
D CIY_21100 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D CIY_21090 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CIY_21080 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CIY_21070 Flagellar biosynthesis pathway, component FliR K02421 fliR; flagellar biosynthesis protein FliR
D CIY_21040 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CIY_21050 Flagellar biosynthesis pathway, component FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CIY_21280 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CIY_21130 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D CIY_21120 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CIY_30360 Chemotaxis protein CheC, inhibitor of MCP methylation K02417 fliN; flagellar motor switch protein FliN
D CIY_21290 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF
D CIY_21300 Flagellar hook-basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE
D CIY_21320 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CIY_21310 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CIY_21200 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CIY_05680 fagellar hook-basal body proteins K02391 flgF; flagellar basal-body rod protein FlgF
D CIY_05670 fagellar hook-basal body proteins K02392 flgG; flagellar basal-body rod protein FlgG
D CIY_05660 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D CIY_21180 fagellar hook-basal body proteins K02390 flgE; flagellar hook protein FlgE
D CIY_28490 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CIY_28500 Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D CIY_28470 Flagellin and related hook-associated proteins K02397 flgL; flagellar hook-associated protein 3 FlgL
D CIY_33620 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D CIY_10440 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_10450 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_12420 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_28400 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_29390 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D CIY_28350 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D CIY_28430 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D CIY_28420 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CIY_29380 Flagellar protein FliS. K02422 fliS; flagellar secretion chaperone FliS
D CIY_20920 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D CIY_21160 Flagellar motor protein K02557 motB; chemotaxis protein MotB
D CIY_28460 Uncharacterized protein conserved in bacteria K13626 fliW; flagellar assembly factor FliW
D CIY_28530 Anti-sigma-28 factor, FlgM. K02398 flgM; negative regulator of flagellin synthesis FlgM
D CIY_28440 Uncharacterized flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D CIY_21020 Flagellar GTP-binding protein K02404 flhF; flagellar biosynthesis protein FlhF
D CIY_21010 ATPases involved in chromosome partitioning K04562 flhG; flagellar biosynthesis protein FlhG
D CIY_06500 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D CIY_06560 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D CIY_29350 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bfi04812]
D CIY_13310 Uncharacterized conserved protein K06990 MEMO1; MEMO1 family protein
D CIY_05690 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CIY_19550 Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D CIY_30420 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D CIY_30400 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bfi04147]
D CIY_31230 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CIY_14530 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CIY_14540 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CIY_09180 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CIY_03460 Uncharacterized protein conserved in bacteria K07192 FLOT; flotillin
D CIY_19920 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CIY_13990 Molecular chaperone K04043 dnaK; molecular chaperone DnaK
D CIY_21500 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CIY_28610 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CIY_10250 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CIY_05260 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D CIY_28840 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CIY_31450 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CIY_04650 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CIY_01200 acetyl-CoA acetyltransferases K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CIY_02890 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CIY_10460 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CIY_16700 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CIY_21890 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CIY_29760 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CIY_31010 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CIY_02410 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CIY_02620 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15190 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_15220 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CIY_33220 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CIY_17770 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CIY_01160 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CIY_14550 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:bfi02048]
D CIY_03630 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D CIY_03620 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D CIY_03670 CRISPR-associated protein, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D CIY_07600 Adenine-specific DNA methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CIY_16170 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CIY_30060 looped-hinge helix DNA binding domain, AbrB family K19156 prlF; antitoxin PrlF
D CIY_03360 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D CIY_03350 RelB antitoxin. K07473 dinJ; DNA-damage-inducible protein J
D CIY_10430 HipA-like C-terminal domain./HipA-like N-terminal domain. K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CIY_28660 HipA N-terminal domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CIY_29010 HipA-like C-terminal domain. K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CIY_24080 Uncharacterized conserved protein K18843 hicB; antitoxin HicB
D CIY_22160 Putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D CIY_04590 Plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D CIY_14240 Plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D CIY_14250 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D CIY_04580 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D CIY_05690 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CIY_19550 Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D CIY_11330 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CIY_17220 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:bfi01504]
D CIY_27620 Aminoglycoside N3'-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D CIY_03560 transporter, NhaC family (TC 2.A.35) K18218 tet35; tetracycline resistance efflux pump
D CIY_15330 small GTP-binding protein domain K18220 tetM; ribosomal protection tetracycline resistance protein
D CIY_08050 ATPase components of ABC transporters with duplicated ATPase domains K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D CIY_31490 Predicted membrane protein involved in D-alanine export K03739 dltB; membrane protein involved in D-alanine export
D CIY_22900 Predicted transcriptional regulators K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bfi03100]
D CIY_T_35080 CIY_T_35080 K14218 tRNA-Ala; tRNA Ala
D CIY_T_34970 CIY_T_34970 K14219 tRNA-Arg; tRNA Arg
D CIY_T_34880 CIY_T_34880 K14219 tRNA-Arg; tRNA Arg
D CIY_T_35220 CIY_T_35220 K14219 tRNA-Arg; tRNA Arg
D CIY_T_35040 CIY_T_35040 K14219 tRNA-Arg; tRNA Arg
D CIY_T_34910 CIY_T_34910 K14219 tRNA-Arg; tRNA Arg
D CIY_T_35230 CIY_T_35230 K14219 tRNA-Arg; tRNA Arg
D CIY_T_34810 CIY_T_34810 K14220 tRNA-Asn; tRNA Asn
D CIY_T_35020 CIY_T_35020 K14220 tRNA-Asn; tRNA Asn
D CIY_T_34850 CIY_T_34850 K14221 tRNA-Asp; tRNA Asp
D CIY_T_35120 CIY_T_35120 K14221 tRNA-Asp; tRNA Asp
D CIY_T_35330 CIY_T_35330 K14221 tRNA-Asp; tRNA Asp
D CIY_T_35000 CIY_T_35000 K14222 tRNA-Cys; tRNA Cys
D CIY_T_35380 CIY_T_35380 K14223 tRNA-Gln; tRNA Gln
D CIY_T_34930 CIY_T_34930 K14223 tRNA-Gln; tRNA Gln
D CIY_T_34820 CIY_T_34820 K14224 tRNA-Glu; tRNA Glu
D CIY_T_35090 CIY_T_35090 K14224 tRNA-Glu; tRNA Glu
D CIY_T_35290 CIY_T_35290 K14224 tRNA-Glu; tRNA Glu
D CIY_T_35310 CIY_T_35310 K14224 tRNA-Glu; tRNA Glu
D CIY_T_34900 CIY_T_34900 K14225 tRNA-Gly; tRNA Gly
D CIY_T_35160 CIY_T_35160 K14225 tRNA-Gly; tRNA Gly
D CIY_T_34920 CIY_T_34920 K14226 tRNA-His; tRNA His
D CIY_T_35170 CIY_T_35170 K14226 tRNA-His; tRNA His
D CIY_T_35050 CIY_T_35050 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35060 CIY_T_35060 K14228 tRNA-Leu; tRNA Leu
D CIY_T_34870 CIY_T_34870 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35140 CIY_T_35140 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35320 CIY_T_35320 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35010 CIY_T_35010 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35250 CIY_T_35250 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35070 CIY_T_35070 K14228 tRNA-Leu; tRNA Leu
D CIY_T_35180 CIY_T_35180 K14229 tRNA-Lys; tRNA Lys
D CIY_T_35240 CIY_T_35240 K14229 tRNA-Lys; tRNA Lys
D CIY_T_34940 CIY_T_34940 K14229 tRNA-Lys; tRNA Lys
D CIY_T_34840 CIY_T_34840 K14230 tRNA-Met; tRNA Met
D CIY_T_35200 CIY_T_35200 K14230 tRNA-Met; tRNA Met
D CIY_T_35360 CIY_T_35360 K14230 tRNA-Met; tRNA Met
D CIY_T_35110 CIY_T_35110 K14230 tRNA-Met; tRNA Met
D CIY_T_35280 CIY_T_35280 K14230 tRNA-Met; tRNA Met
D CIY_T_35370 CIY_T_35370 K14231 tRNA-Phe; tRNA Phe
D CIY_T_35210 CIY_T_35210 K14231 tRNA-Phe; tRNA Phe
D CIY_T_34960 CIY_T_34960 K14232 tRNA-Pro; tRNA Pro
D CIY_T_34890 CIY_T_34890 K14232 tRNA-Pro; tRNA Pro
D CIY_T_35150 CIY_T_35150 K14232 tRNA-Pro; tRNA Pro
D CIY_T_34990 CIY_T_34990 K14233 tRNA-Ser; tRNA Ser
D CIY_T_35390 CIY_T_35390 K14233 tRNA-Ser; tRNA Ser
D CIY_T_35400 CIY_T_35400 K14233 tRNA-Ser; tRNA Ser
D CIY_T_34980 CIY_T_34980 K14234 tRNA-Thr; tRNA Thr
D CIY_T_34830 CIY_T_34830 K14234 tRNA-Thr; tRNA Thr
D CIY_T_35030 CIY_T_35030 K14234 tRNA-Thr; tRNA Thr
D CIY_T_35100 CIY_T_35100 K14234 tRNA-Thr; tRNA Thr
D CIY_T_35300 CIY_T_35300 K14234 tRNA-Thr; tRNA Thr
D CIY_T_35260 CIY_T_35260 K14235 tRNA-Trp; tRNA Trp
D CIY_T_35350 CIY_T_35350 K14236 tRNA-Tyr; tRNA Tyr
D CIY_T_35190 CIY_T_35190 K14236 tRNA-Tyr; tRNA Tyr
D CIY_T_35270 CIY_T_35270 K14237 tRNA-Val; tRNA Val
D CIY_T_35130 CIY_T_35130 K14237 tRNA-Val; tRNA Val
D CIY_T_34860 CIY_T_34860 K14237 tRNA-Val; tRNA Val
D CIY_T_35340 CIY_T_35340 K14237 tRNA-Val; tRNA Val
D CIY_35420 Bacterial RNase P class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CIY_33650 Pyridoxal phosphate biosynthesis protein K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D CIY_29960 carboxynorspermidine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D CIY_20200 Peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CIY_33680 methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CIY_31980 desulfoferrodoxin ferrous iron-binding domain K05919 dfx; superoxide reductase [EC:1.15.1.2]
D CIY_15720 sulfide dehydrogenase (flavoprotein) subunit SudB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CIY_20030 ribonucleoside-triphosphate reductase class III activase subunit K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CIY_02070 pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CIY_30930 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CIY_21690 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CIY_09950 Acetyltransferase (isoleucine patch superfamily) K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CIY_13840 Sortase and related acyltransferases K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D CIY_05750 NCAIR mutase (PurE)-related proteins K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CIY_12840 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CIY_33660 Uncharacterized protein conserved in bacteria K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D CIY_18400 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CIY_27740 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D CIY_02710 Serine kinase of the HPr protein, regulates carbohydrate metabolism K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D CIY_04830 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CIY_31510 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CIY_09890 Predicted esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D CIY_15280 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D CIY_12520 Predicted thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CIY_10300 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D CIY_09680 Uncharacterized conserved protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D CIY_29730 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D CIY_30810 Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CIY_18770 Micrococcal nuclease (thermonuclease) homologs K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CIY_22490 Beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D CIY_23740 Beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D CIY_11230 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D CIY_12690 Beta-xylosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D CIY_12700 Beta-xylosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D CIY_10200 Endoglucanase Y K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156]
D CIY_16360 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CIY_08660 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CIY_20850 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CIY_02550 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CIY_04620 MoxR-like ATPases K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CIY_29630 Protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D CIY_11370 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CIY_29870 Uncharacterized conserved protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CIY_09120 N-acyl-D-glucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D CIY_10650 CoA-substrate-specific enzyme activase, putative K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CIY_18160 electron transport complex, RnfABCDGE type, C subunit/electron transport complex, RnfABCDGE type, D subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CIY_18200 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CIY_11650 copper-(or silver)-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D CIY_02660 Phosphotransferase System HPr (HPr) Family K11184 chr; catabolite repression HPr-like protein
C 99982 Energy metabolism
D CIY_18170 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CIY_18180 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CIY_18190 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CIY_11340 FeS cluster assembly scaffold protein NifU, Clostridium type K04488 iscU; nitrogen fixation protein NifU and related proteins
D CIY_24660 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit K14086 echA; ech hydrogenase subunit A
D CIY_24650 ech hydrogenase subunit B K14087 echB; ech hydrogenase subunit B
D CIY_24640 ech hydrogenase subunit C K14088 echC; ech hydrogenase subunit C
D CIY_24630 Respiratory-chain NADH dehydrogenase, 30 Kd subunit. K14089 echD; ech hydrogenase subunit D
D CIY_24610 Ni,Fe-hydrogenase III large subunit K14090 echE; ech hydrogenase subunit E
D CIY_24600 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) K14091 echF; ech hydrogenase subunit F
D CIY_01170 Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CIY_19910 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CIY_19030 Lactoylglutathione lyase and related lyases K08234 yaeR; glyoxylase I family protein
D CIY_19420 Predicted enzyme with a TIM-barrel fold K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CIY_29480 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D CIY_22640 hypothetical protein K02173 yggC; putative kinase
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CIY_01910 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D CIY_02340 Transcriptional accessory protein K06959 tex; protein Tex
D CIY_18460 Uncharacterized protein conserved in bacteria K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
C 99975 Protein processing
D CIY_10320 trigger factor K03545 tig; trigger factor
D CIY_07380 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 tig; trigger factor
D CIY_17410 SsrA-binding protein K03664 smpB; SsrA-binding protein
D CIY_24540 Hydrogenase maturation factor K04654 hypD; hydrogenase expression/formation protein HypD
D CIY_24530 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CIY_32640 Hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE
D CIY_27020 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D CIY_21370 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D CIY_00460 Negative regulator of genetic competence, sporulation and motility K16511 mecA1_2; adapter protein MecA 1/2
D CIY_29680 Negative regulator of genetic competence, sporulation and motility K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D CIY_24930 Predicted double-stranded RNA/RNA-DNA hybrid binding protein K06993 K06993; ribonuclease H-related protein
D CIY_20260 conserved hypothetical protein TIGR00252 K07460 yraN; putative endonuclease
D CIY_27010 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 smf; DNA processing protein
D CIY_21360 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 smf; DNA processing protein
D CIY_23530 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 ycaJ; putative ATPase
D CIY_19350 Transposase and inactivated derivatives, IS30 family K07482 K07482; transposase, IS30 family
D CIY_27210 Transposase and inactivated derivatives K07484 K07484; transposase
D CIY_27200 Transposase and inactivated derivatives K07484 K07484; transposase
D CIY_08180 Transposase and inactivated derivatives K07486 K07486; transposase
D CIY_27030 Transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D CIY_29420 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CIY_10900 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CIY_09990 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CIY_05040 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CIY_12050 Predicted Na+-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D CIY_10610 CO dehydrogenase maturation factor K07321 cooC; CO dehydrogenase maturation factor
D CIY_28360 hypothetical protein K06320 cgeB; spore maturation protein CgeB
D CIY_30500 Predicted RNA-binding protein K06346 jag; spoIIIJ-associated protein
D CIY_06610 Uncharacterized protein, involved in the regulation of septum location K06412 spoVG; stage V sporulation protein G
D CIY_21800 Spore germination protein K06298 gerM; germination protein M
C 99993 Cell motility
C 99995 Signaling proteins
D CIY_07430 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CIY_33460 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D CIY_19710 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CIY_14400 Predicted ATPase related to phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D CIY_15130 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme
D CIY_17460 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CIY_09760 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D CIY_19250 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025 K07025; putative hydrolase of the HAD superfamily
D CIY_32080 Predicted hydrolase (HAD superfamily) K07025 K07025; putative hydrolase of the HAD superfamily
D CIY_14830 Predicted membrane protein K07058 K07058; membrane protein
D CIY_30840 YhgE/Pip N-terminal domain K01421 yhgE; putative membrane protein
D CIY_30880 YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain K01421 yhgE; putative membrane protein
D CIY_15710 CobW/HypB/UreG, nucleotide-binding domain. K08986 ycgQ; putative membrane protein
C 99997 Function unknown
D CIY_04460 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein
D CIY_09860 hypothetical protein K06889 K06889; uncharacterized protein
D CIY_22840 Lysophospholipase K06889 K06889; uncharacterized protein
D CIY_32130 Hydrolases of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D CIY_05980 Archaea bacterial proteins of unknown function. K06921 K06921; uncharacterized protein
D CIY_16740 Predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D CIY_00570 Predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D CIY_00580 Archaea bacterial proteins of unknown function. K06921 K06921; uncharacterized protein
D CIY_01840 Predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D CIY_26990 hypothetical protein K06926 K06926; uncharacterized protein
D CIY_18970 Predicted DNA-binding proteins K06933 K06933; uncharacterized protein
D CIY_22050 hypothetical protein K06950 K06950; uncharacterized protein
D CIY_20460 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D CIY_08890 Predicted Zn-dependent protease K06973 K06973; uncharacterized protein
D CIY_23220 Predicted deacylase K06987 K06987; uncharacterized protein
D CIY_23230 Predicted deacylase K06987 K06987; uncharacterized protein
D CIY_26730 Predicted flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein
D CIY_12350 Predicted membrane protein, putative toxin regulator K07035 K07035; uncharacterized protein
D CIY_05950 conserved hypothetical protein TIGR00305 K07063 K07063; uncharacterized protein
D CIY_25360 conserved hypothetical protein TIGR00305 K07063 K07063; uncharacterized protein
D CIY_31140 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D CIY_23440 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D CIY_24470 hypothetical protein K07095 K07095; uncharacterized protein
D CIY_16370 Predicted phosphohydrolase K07099 K07099; uncharacterized protein
D CIY_04230 Predicted small molecule binding protein (contains 3H domain) K07105 K07105; uncharacterized protein
D CIY_16510 Short-chain dehydrogenases of various substrate specificities K07124 K07124; uncharacterized protein
D CIY_14560 FOG: TPR repeat, SEL1 subfamily K07126 K07126; uncharacterized protein
D CIY_19610 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein
D CIY_15630 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D CIY_05060 Predicted membrane protein K07149 K07149; uncharacterized protein
D CIY_16300 Uncharacterized conserved protein K09117 K09117; uncharacterized protein
D CIY_33340 Uncharacterized conserved protein K09155 K09155; uncharacterized protein
D CIY_33450 Uncharacterized conserved protein K09157 K09157; uncharacterized protein
D CIY_13740 Uncharacterized conserved protein K09702 K09702; uncharacterized protein
D CIY_25320 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain K09749 K09749; uncharacterized protein
D CIY_17180 Uncharacterized protein conserved in bacteria K09766 K09766; uncharacterized protein
D CIY_30220 Uncharacterized protein conserved in bacteria K09770 K09770; uncharacterized protein
D CIY_30150 Uncharacterized protein conserved in bacteria K09775 K09775; uncharacterized protein
D CIY_20490 Uncharacterized protein conserved in bacteria K09787 K09787; uncharacterized protein
D CIY_02560 Uncharacterized protein conserved in bacteria K00243 K00243; uncharacterized protein
D CIY_22220 Uncharacterized protein conserved in bacteria K09955 K09955; uncharacterized protein
D CIY_18150 hypothetical protein K07502 yprB; uncharacterized protein
D CIY_18800 Predicted ribosomal protein K07584 ysxB; uncharacterized protein
D CIY_17800 Predicted nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024