+E Transcription factors KO #

  Transcription Factors - Bacillus halotolerans

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D DIC78_09180 AraC family transcriptional regulator K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon D DIC78_10450 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator C LysR family D DIC78_21430 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D DIC78_04930 LysR family transcriptional regulator K19242 citR; LysR family transcriptional regulator, repressor for citA D DIC78_08165 LysR family transcriptional regulator K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD D DIC78_12150 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D DIC78_21450 LysR family transcriptional regulator K21959 ftsR; LysR family transcriptional regulator, cell division regulator D DIC78_03490 LysR family transcriptional regulator K21959 ftsR; LysR family transcriptional regulator, cell division regulator D DIC78_16895 LysR family transcriptional regulator K21960 ytlI; LysR family transcriptional regulator, regulator of the ytmI operon C DeoR family D DIC78_02225 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D DIC78_12795 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D DIC78_11035 DeoR/GlpR transcriptional regulator K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor D DIC78_12850 DeoR/GlpR transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D DIC78_18825 transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D DIC78_07980 DeoR/GlpR transcriptional regulator K21601 ycnK; DeoR family transcriptional regulator, copper-sensing transcriptional repressor C LacI family D DIC78_13100 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DIC78_13970 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DIC78_16470 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DIC78_16715 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DIC78_20425 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D DIC78_04325 NTD biosynthesis operon regulator NtdR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D DIC78_03300 LacI family transcriptional regulator K26609 exuR; LacI family transcriptional regulator, galacturonate utilization repressor C GntR family D DIC78_14075 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D DIC78_05885 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D DIC78_10860 GntR family transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA D DIC78_06930 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D DIC78_14915 UTRA domain-containing protein K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator D DIC78_08830 GntR family transcriptional regulator K24966 gamR; GntR family transcriptional regulator, amino sugar utilization regulator D DIC78_13570 phosphonate metabolism transcriptional regulator PhnF K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D DIC78_00975 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D DIC78_08760 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DIC78_13965 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DIC78_18530 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DIC78_04905 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DIC78_07230 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DIC78_08015 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DIC78_07145 GntR family transcriptional regulator K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC D DIC78_16370 GntR family transcriptional regulator K07979 ytrA; GntR family transcriptional regulator D DIC78_10905 GntR family transcriptional regulator K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor C TetR/AcrR family D DIC78_17355 TetR family transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D DIC78_10485 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DIC78_18365 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DIC78_06375 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D DIC78_08665 TetR/AcrR family transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor D DIC78_10945 TetR/AcrR family transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor D DIC78_18070 TetR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon C Lrp/AsnC family D DIC78_12980 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DIC78_06570 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DIC78_07825 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D DIC78_17425 helix-turn-helix transcriptional regulator K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein D DIC78_06795 transcriptional regulator K16247 gutR; LuxR family transcriptional regulator, glucitol operon activator C MarR family D DIC78_12785 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D DIC78_04630 HTH-type transcriptional regulator Hpr K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr D DIC78_02600 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D DIC78_02775 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D DIC78_02885 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D DIC78_00595 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D DIC78_04855 MerR family transcriptional regulator K11923 cueR; MerR family transcriptional regulator, copper efflux regulator D DIC78_19445 MerR family transcriptional regulator K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene D DIC78_07250 transcriptional regulator K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene D DIC78_18165 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D DIC78_02790 MerR family transcriptional regulator K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator D DIC78_06100 MerR family DNA-binding transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon C Fur family D DIC78_19715 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D DIC78_18895 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D DIC78_05405 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family C Rrf2 family D DIC78_04955 nsrR; transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D DIC78_17885 transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D DIC78_13820 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D DIC78_07225 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D DIC78_21035 transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D DIC78_14210 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons C XRE family D DIC78_19145 transcriptional regulator K19449 sinR; XRE family transcriptional regulator, master regulator for biofilm formation D DIC78_18545 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D DIC78_07025 DNA-binding protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D DIC78_13870 helix-turn-helix domain-containing protein K19417 slrR; XRE family transcriptional regulator, biofilm formation regulator C PadR family D DIC78_05600 PadR family transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator D DIC78_11965 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D DIC78_17255 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D DIC78_04065 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D DIC78_19190 transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D DIC78_05675 MurR/RpiR family transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D DIC78_20255 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D DIC78_04310 hypothetical protein K11925 sgrR; SgrR family transcriptional regulator D DIC78_14270 XRE family transcriptional regulator K22299 rghR; HTH-type transcriptional regulator, competence development regulator D DIC78_14275 XRE family transcriptional regulator K22299 rghR; HTH-type transcriptional regulator, competence development regulator D DIC78_15985 GbsR/MarR family transcriptional regulator K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator D DIC78_14185 GbsR/MarR family transcriptional regulator K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator D DIC78_14235 GbsR/MarR family transcriptional regulator K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator D DIC78_18100 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D DIC78_09935 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D DIC78_05720 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DIC78_14540 hypothetical protein K26990 rsoA; sigma-O factor regulatory protein RsoA D DIC78_17290 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D DIC78_10760 sigma-54-dependent Fis family transcriptional regulator K06714 rocR; arginine utilization regulatory protein D DIC78_06835 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D DIC78_01305 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor D DIC78_00370 transcriptional regulator K07727 K07727; putative transcriptional regulator D DIC78_05210 transcriptional regulator K07729 K07729; putative transcriptional regulator D DIC78_05490 transcriptional regulator K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family D DIC78_07610 antitoxin EndoAI K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C Other families B Other transcription factors C BglG family D DIC78_11405 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator D DIC78_11750 PRD domain-containing protein K26931 sacY; levansucrase and sucrase synthesis operon transcriptional antiterminator D DIC78_11935 transcription antiterminator K26932 sacT; sacPA operon transcriptional antiterminator D DIC78_02485 transcription antiterminator K03480 glcT; transcriptional antiterminator D DIC78_13010 PRD domain-containing protein K03483 mtlR; mannitol operon transcriptional activator D DIC78_07875 PRD domain-containing protein K03483 mtlR; mannitol operon transcriptional activator D DIC78_07170 PTS sugar transporter subunit IIA K02538 manR; mannose operon transcriptional activator D DIC78_11640 PRD domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator C Others D DIC78_14370 transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D DIC78_14990 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D DIC78_08365 PucR family transcriptional regulator K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D DIC78_09985 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D DIC78_02170 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D DIC78_09890 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D DIC78_10270 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DIC78_10285 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DIC78_07330 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D DIC78_05015 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator D DIC78_19325 transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism D DIC78_21260 XylR family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor D DIC78_18700 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D DIC78_03750 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D DIC78_03745 thiazole tautomerase TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D DIC78_09670 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D DIC78_13540 hypothetical protein K03973 pspC; phage shock protein C D DIC78_14085 sugar-binding transcriptional regulator K05311 cggR; central glycolytic genes regulator D DIC78_11205 sugar-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D DIC78_03940 BMP family ABC transporter substrate-binding protein K05519 med; transcriptional activator of comK gene D DIC78_20090 trp RNA-binding attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D DIC78_01655 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DIC78_12165 RsfA family transcriptional regulator K06314 rsfA; prespore-specific regulator D DIC78_02465 transcriptional regulator K06315 splA; transcriptional regulator of the spore photoproduct lyase operon D DIC78_07265 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D DIC78_17105 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D DIC78_11250 transcriptional regulator K09683 hutP; hut operon positive regulatory protein D DIC78_04410 competence protein K02250 comK; competence protein ComK D DIC78_01830 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ D DIC78_14520 hypothetical protein K26991 yvrL; membrane-bound negative regulator ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0